Ciapin1 (cytokine induced apoptosis inhibitor 1) - Rat Genome Database

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Gene: Ciapin1 (cytokine induced apoptosis inhibitor 1) Mus musculus
Analyze
Symbol: Ciapin1
Name: cytokine induced apoptosis inhibitor 1
RGD ID: 1557639
MGI Page MGI
Description: Predicted to enable 2 iron, 2 sulfur cluster binding activity and iron ion binding activity. Acts upstream of or within hemopoiesis and negative regulation of apoptotic process. Located in cytoplasm and nucleolus. Is expressed in several structures, including ganglia; sensory organ; submandibular gland primordium; tooth; and urinary system. Orthologous to human CIAPIN1 (cytokine induced apoptosis inhibitor 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2810413N20Rik; a; AA617265; anamorsin; AU021794; cytokine-induced apoptosis inhibitor 1; fe-S cluster assembly protein DRE2 homolog; MGC29983
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm9563  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39895,546,446 - 95,565,454 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl895,546,432 - 95,564,986 (-)EnsemblGRCm39 Ensembl
GRCm38894,819,818 - 94,838,830 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl894,819,804 - 94,838,358 (-)EnsemblGRCm38mm10GRCm38
MGSCv37897,343,718 - 97,362,240 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36897,708,947 - 97,727,469 (-)NCBIMGSCv36mm8
Celera899,144,006 - 99,162,184 (-)NCBICelera
Cytogenetic Map8C5NCBI
cM Map846.86NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IDA,ISO)
mitochondrial intermembrane space  (IEA)
mitochondrion  (ISO)
nucleolus  (IDA,ISO)
nucleoplasm  (IEA,ISO)
nucleus  (IEA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. Iron-sulfur cluster biogenesis in mammalian cells: New insights into the molecular mechanisms of cluster delivery. Maio N and Rouault TA, Biochim Biophys Acta. 2015 Jun;1853(6):1493-512. doi: 10.1016/j.bbamcr.2014.09.009. Epub 2014 Sep 19.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. MGD IEA MGD IEA
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. Biogenesis of cytosolic and nuclear iron-sulfur proteins and their role in genome stability. Paul VD and Lill R, Biochim Biophys Acta. 2015 Jun;1853(6):1528-39. doi: 10.1016/j.bbamcr.2014.12.018. Epub 2015 Jan 10.
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:14970183   PMID:15489334   PMID:15741177  
PMID:15782199   PMID:16141072   PMID:16141073   PMID:16957168   PMID:17967808   PMID:18799693   PMID:21219862   PMID:21267068   PMID:21513700   PMID:21873635   PMID:24440520   PMID:24973211  
PMID:30818058   PMID:31582212   PMID:32325033   PMID:32554809   PMID:35259639  


Genomics

Comparative Map Data
Ciapin1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39895,546,446 - 95,565,454 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl895,546,432 - 95,564,986 (-)EnsemblGRCm39 Ensembl
GRCm38894,819,818 - 94,838,830 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl894,819,804 - 94,838,358 (-)EnsemblGRCm38mm10GRCm38
MGSCv37897,343,718 - 97,362,240 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36897,708,947 - 97,727,469 (-)NCBIMGSCv36mm8
Celera899,144,006 - 99,162,184 (-)NCBICelera
Cytogenetic Map8C5NCBI
cM Map846.86NCBI
CIAPIN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381657,428,187 - 57,447,385 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1657,428,187 - 57,447,420 (-)EnsemblGRCh38hg38GRCh38
GRCh371657,462,099 - 57,481,297 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361656,019,587 - 56,038,870 (-)NCBINCBI36Build 36hg18NCBI36
Build 341656,019,581 - 56,032,341NCBI
Celera1641,962,936 - 41,982,221 (-)NCBICelera
Cytogenetic Map16q21NCBI
HuRef1643,329,733 - 43,349,016 (-)NCBIHuRef
CHM1_11658,870,146 - 58,889,429 (-)NCBICHM1_1
T2T-CHM13v2.01663,223,362 - 63,242,561 (-)NCBIT2T-CHM13v2.0
Ciapin1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81910,185,955 - 10,199,120 (+)NCBIGRCr8
mRatBN7.21910,179,963 - 10,195,511 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1910,180,100 - 10,195,503 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1910,144,184 - 10,157,188 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01910,911,028 - 10,924,032 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01910,197,976 - 10,210,981 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01910,596,923 - 10,612,414 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1910,596,960 - 10,610,049 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01910,591,726 - 10,607,111 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41910,619,171 - 10,632,187 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1910,066,716 - 10,079,509 (+)NCBICelera
Cytogenetic Map19p13NCBI
Ciapin1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543315,065,031 - 15,081,293 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543315,065,031 - 15,081,392 (-)NCBIChiLan1.0ChiLan1.0
CIAPIN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21866,896,003 - 66,917,703 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11672,816,823 - 72,838,576 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01637,701,773 - 37,723,556 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11656,835,024 - 56,856,502 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1656,835,024 - 56,856,502 (-)Ensemblpanpan1.1panPan2
CIAPIN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1258,977,592 - 58,992,785 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl258,977,676 - 58,992,581 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha255,607,027 - 55,622,240 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0259,516,013 - 59,531,188 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl259,516,048 - 59,531,834 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1256,347,304 - 56,362,485 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0257,355,010 - 57,370,223 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0258,248,470 - 58,263,682 (+)NCBIUU_Cfam_GSD_1.0
Ciapin1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934950,086,413 - 50,103,861 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049364759,485,214 - 9,502,619 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CIAPIN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl619,356,069 - 19,373,060 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1619,356,065 - 19,373,085 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2617,323,846 - 17,335,336 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CIAPIN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1543,360,465 - 43,378,561 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl543,359,399 - 43,378,686 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604732,840,525 - 32,858,606 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ciapin1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474628,630,774 - 28,647,182 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474628,630,662 - 28,647,182 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ciapin1
708 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3142
Count of miRNA genes:860
Interacting mature miRNAs:1192
Transcripts:ENSMUST00000034233, ENSMUST00000159377, ENSMUST00000160245, ENSMUST00000160301, ENSMUST00000160898, ENSMUST00000161762, ENSMUST00000161792, ENSMUST00000162357, ENSMUST00000162538, ENSMUST00000162589
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined866326836100326976Mouse
14696809Rbcn3_mrod bipolar cell number 3 (mouse)895056628102856632Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined876411976110412125Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined866084397100084549Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined871032003105032123Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined876411976110412125Mouse
1301766Desp1_mdespair 1 (mouse)Not determined885486208119486373Mouse
1301253Skmw2_mskeletal muscle weight 2 (mouse)Not determined886443553120443701Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871740461124622354Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6418673698186736Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86466617698666325Mouse
10755519Wbc1_mwhite blood cell count 1 (mouse)882345783116345783Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879808806113809031Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined876411976110412125Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined872122809106123021Mouse
10045619Heal14_mwound healing/regeneration 14 (mouse)Not determined886443553120443701Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871829531105829637Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873929123107929226Mouse
10755530Wbc2_mwhite blood cell count 2 (mouse)881819296115819296Mouse
1302049Heal1_mwound healing/regeneration 1 (mouse)Not determined886443553120443701Mouse
27226796Scvln16_msacral vertebrae length 2, 16 week (mouse)889726628130027694Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined871032003105032123Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)874126628126826739Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71740461124622354Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined879245241113245331Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined876402145110402251Mouse

Markers in Region
AU021794  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38894,822,575 - 94,822,818UniSTSGRCm38
MGSCv37897,346,475 - 97,346,718UniSTSGRCm37
Celera899,146,759 - 99,147,002UniSTS
Cytogenetic Map8C5UniSTS
Whitehead/MRC_RH81151.8UniSTS
RH124525  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38894,822,991 - 94,823,209UniSTSGRCm38
MGSCv37897,346,891 - 97,347,109UniSTSGRCm37
Celera899,147,175 - 99,147,393UniSTS
Cytogenetic Map8C5UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_134141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC129606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW491943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY523555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC016261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY283649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000034233   ⟹   ENSMUSP00000034233
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl895,549,189 - 95,564,893 (-)Ensembl
GRCm38.p6 Ensembl894,822,561 - 94,838,265 (-)Ensembl
Ensembl Acc Id: ENSMUST00000159377
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl895,558,401 - 95,564,889 (-)Ensembl
GRCm38.p6 Ensembl894,831,773 - 94,838,261 (-)Ensembl
Ensembl Acc Id: ENSMUST00000160245
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl895,549,563 - 95,550,821 (-)Ensembl
GRCm38.p6 Ensembl894,822,935 - 94,824,193 (-)Ensembl
Ensembl Acc Id: ENSMUST00000160301
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl895,551,844 - 95,559,323 (-)Ensembl
GRCm38.p6 Ensembl894,825,216 - 94,832,695 (-)Ensembl
Ensembl Acc Id: ENSMUST00000160898
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl895,551,264 - 95,553,340 (-)Ensembl
GRCm38.p6 Ensembl894,824,636 - 94,826,712 (-)Ensembl
Ensembl Acc Id: ENSMUST00000161762   ⟹   ENSMUSP00000123794
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl895,549,671 - 95,558,490 (-)Ensembl
GRCm38.p6 Ensembl894,823,043 - 94,831,862 (-)Ensembl
Ensembl Acc Id: ENSMUST00000161792   ⟹   ENSMUSP00000125474
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl895,549,482 - 95,559,287 (-)Ensembl
GRCm38.p6 Ensembl894,822,854 - 94,832,659 (-)Ensembl
Ensembl Acc Id: ENSMUST00000162357   ⟹   ENSMUSP00000148350
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl895,549,649 - 95,553,342 (-)Ensembl
GRCm38.p6 Ensembl894,823,021 - 94,826,714 (-)Ensembl
Ensembl Acc Id: ENSMUST00000162538   ⟹   ENSMUSP00000125451
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl895,546,432 - 95,564,986 (-)Ensembl
GRCm38.p6 Ensembl894,819,804 - 94,838,358 (-)Ensembl
Ensembl Acc Id: ENSMUST00000162589
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl895,561,091 - 95,564,893 (-)Ensembl
GRCm38.p6 Ensembl894,834,463 - 94,838,265 (-)Ensembl
RefSeq Acc Id: NM_134141   ⟹   NP_598902
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39895,546,446 - 95,564,968 (-)NCBI
GRCm38894,819,818 - 94,838,340 (-)NCBI
MGSCv37897,343,718 - 97,362,240 (-)RGD
Celera899,144,006 - 99,162,184 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006530560   ⟹   XP_006530623
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39895,549,182 - 95,564,915 (-)NCBI
GRCm38894,822,554 - 94,838,318 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003947215
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39895,549,180 - 95,565,454 (-)NCBI
GRCm38894,822,552 - 94,838,830 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004934747
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39895,549,182 - 95,564,915 (-)NCBI
Sequence:
RefSeq Acc Id: NP_598902   ⟸   NM_134141
- UniProtKB: Q8WTY4 (UniProtKB/Swiss-Prot),   Q8VC24 (UniProtKB/Swiss-Prot),   Q3UJW5 (UniProtKB/Swiss-Prot),   Q91W83 (UniProtKB/Swiss-Prot),   F7BWP1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530623   ⟸   XM_006530560
- Peptide Label: isoform X1
- UniProtKB: Q91W83 (UniProtKB/Swiss-Prot),   Q8WTY4 (UniProtKB/Swiss-Prot),   Q8VC24 (UniProtKB/Swiss-Prot),   Q3UJW5 (UniProtKB/Swiss-Prot),   F7BWP1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000034233   ⟸   ENSMUST00000034233
Ensembl Acc Id: ENSMUSP00000125451   ⟸   ENSMUST00000162538
Ensembl Acc Id: ENSMUSP00000148350   ⟸   ENSMUST00000162357
Ensembl Acc Id: ENSMUSP00000125474   ⟸   ENSMUST00000161792
Ensembl Acc Id: ENSMUSP00000123794   ⟸   ENSMUST00000161762
Protein Domains
Anamorsin C-terminal   Anamorsin N-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8WTY4-F1-model_v2 AlphaFold Q8WTY4 1-309 view protein structure

Promoters
RGD ID:8667919
Promoter ID:EPDNEW_M11991
Type:single initiation site
Name:Ciapin1_2
Description:Mus musculus cytokine induced apoptosis inhibitor 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11992  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38894,832,707 - 94,832,767EPDNEW
RGD ID:8667921
Promoter ID:EPDNEW_M11992
Type:initiation region
Name:Ciapin1_1
Description:Mus musculus cytokine induced apoptosis inhibitor 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11991  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38894,838,265 - 94,838,325EPDNEW
RGD ID:6842937
Promoter ID:MM_KWN:55351
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000067679
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36897,347,371 - 97,347,871 (-)MPROMDB
RGD ID:6842936
Promoter ID:MM_KWN:55352
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000067677,   OTTMUST00000067678,   OTTMUST00000068617
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36897,350,806 - 97,351,306 (-)MPROMDB
RGD ID:6842939
Promoter ID:MM_KWN:55356
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000067672,   OTTMUST00000067675,   OTTMUST00000068616,   UC009MXC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36897,362,121 - 97,362,782 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1922083 AgrOrtholog
Ensembl Genes ENSMUSG00000031781 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000034233 ENTREZGENE
  ENSMUST00000034233.15 UniProtKB/Swiss-Prot
  ENSMUST00000161762.4 UniProtKB/TrEMBL
  ENSMUST00000161792.9 UniProtKB/TrEMBL
  ENSMUST00000162357.2 UniProtKB/TrEMBL
  ENSMUST00000162538 ENTREZGENE
  ENSMUST00000162538.9 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.150 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Anamorsin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Anamorsin_N_metazoan UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CIAPIN1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM-dependent_MTases UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:109006 UniProtKB/Swiss-Prot
MGD MGI:1922083 ENTREZGENE
NCBI Gene Ciapin1 ENTREZGENE
PANTHER ANAMORSIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13273 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Anamorsin_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CIAPIN1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ciapin1 PhenoGen
Superfamily-SCOP SSF53335 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1D5RLF8_MOUSE UniProtKB/TrEMBL
  CPIN1_MOUSE UniProtKB/Swiss-Prot
  E0CYY1_MOUSE UniProtKB/TrEMBL
  F7BWP1 ENTREZGENE, UniProtKB/TrEMBL
  Q3UJW5 ENTREZGENE
  Q8VC24 ENTREZGENE
  Q8WTY4 ENTREZGENE
  Q91W83 ENTREZGENE
UniProt Secondary Q3UJW5 UniProtKB/Swiss-Prot
  Q8VC24 UniProtKB/Swiss-Prot
  Q91W83 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-26 Ciapin1  cytokine induced apoptosis inhibitor 1  2810413N20Rik  RIKEN cDNA 2810413N20 gene  Symbol and/or name updated 27372883 PROVISIONAL
2024-08-21 2810413N20Rik  RIKEN cDNA 2810413N20 gene  Ciapin1  cytokine induced apoptosis inhibitor 1  Symbol and/or name change 5135510 APPROVED