Fundc2 (FUN14 domain containing 2)

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Gene: Fundc2 (FUN14 domain containing 2) Mus musculus

Analyze

Symbol:

Fundc2

Name:

FUN14 domain containing 2

RGD ID:

1557611

MGI Page

MGI

Description:

Predicted to enable phosphatidylinositol-3,4,5-trisphosphate binding activity. Involved in regulation of platelet activation. Predicted to be located in mitochondrion. Predicted to be active in mitochondrial outer membrane. Orthologous to human FUNDC2 (FUN14 domain containing 2).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

4833415N24Rik; DC44; FUN14 domain-containing protein 2; HCBP; HCBP6; hepatitis C virus core-binding protein 6

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FUNDC2 (FUN14 domain containing 2)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Rattus norvegicus (Norway rat):	Fundc2 (FUN14 domain containing 2)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Fundc2 (FUN14 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FUNDC2 (FUN14 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FUNDC2 (FUN14 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fundc2 (FUN14 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FUNDC2 (FUN14 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FUNDC2 (FUN14 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fundc2 (FUN14 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	FUNDC2 (FUN14 domain containing 2)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Rattus norvegicus (Norway rat):	Fundc2 (FUN14 domain containing 2)	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Danio rerio (zebrafish):	fundc2 (fun14 domain containing 2)	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|SonicParanoid\|ZFIN)
Drosophila melanogaster (fruit fly):	CG12511	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	fndc-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	CG5676	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoInspector\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	74,426,005 - 74,440,764 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	74,426,005 - 74,440,065 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	75,382,399 - 75,397,158 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	75,382,399 - 75,396,459 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	72,627,738 - 72,642,497 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	71,635,142 - 71,648,836 (+)	NCBI		MGSCv36	mm8
Celera	X	66,783,170 - 66,799,149 (+)	NCBI		Celera
Cytogenetic Map	X	A7.3	NCBI
cM Map	X	38.22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adrenoleukodystrophy (ISO)

autistic disorder (ISO)

autosomal hemophilia A (ISO)

Barth syndrome (ISO)

cerebral creatine deficiency syndrome 1 (ISO)

dyskeratosis congenita (ISO)

Emery-Dreifuss muscular dystrophy (ISO)

factor VIII deficiency (ISO)

favism (ISO)

immunodeficiency 33 (ISO)

megacolon (ISO)

paraplegia (ISO)

periventricular nodular heterotopia (ISO)

Splenomegaly (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,2-dimethylhydrazine (EXP)

17alpha-ethynylestradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (ISO)

aconitine (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

amiodarone (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (ISO)

bisphenol F (ISO)

CGP 52608 (ISO)

copper(II) sulfate (ISO)

corosolic acid (ISO)

crocidolite asbestos (EXP)

doxorubicin (ISO)

endosulfan (ISO)

flutamide (ISO)

folic acid (EXP)

FR900359 (ISO)

furan (ISO)

gentamycin (ISO)

glafenine (ISO)

methapyrilene (ISO)

methimazole (ISO)

nickel sulfate (ISO)

paracetamol (ISO)

perfluorohexanesulfonic acid (EXP)

perfluorooctane-1-sulfonic acid (EXP)

permethrin (ISO)

pirinixic acid (EXP)

potassium chromate (ISO)

Soman (ISO)

thapsigargin (EXP)

trichloroethene (ISO)

triphenyl phosphate (ISO)

Triptolide (ISO)

troglitazone (EXP)

tungsten (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

autophagy of mitochondrion (IBA)

intracellular triglyceride homeostasis (ISO,ISS)

regulation of platelet activation (IMP)

Cellular Component

membrane (IEA)

mitochondrial outer membrane (IBA)

mitochondrion (ISO)

nucleus (IEA)

Molecular Function

phosphatidylinositol-3,4,5-trisphosphate binding (ISO,ISS)

protein binding (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

decreased susceptibility to induced thrombosis (IAGP)

increased apoptosis (IAGP)

thrombocytopenia (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
4.	Database resources of the National Center for Biotechnology Information.	Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:12477932	PMID:14610273	PMID:16141072	PMID:16141073	PMID:21267068	PMID:21873635	PMID:29222160
PMID:29786068	PMID:30550785	PMID:30576423	PMID:32325033	PMID:32535386	PMID:35449600	PMID:35710796	PMID:36037337	PMID:37196079	PMID:37700593

Genomics

Comparative Map Data

Fundc2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	74,426,005 - 74,440,764 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	74,426,005 - 74,440,065 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	75,382,399 - 75,397,158 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	75,382,399 - 75,396,459 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	72,627,738 - 72,642,497 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	71,635,142 - 71,648,836 (+)	NCBI		MGSCv36	mm8
Celera	X	66,783,170 - 66,799,149 (+)	NCBI		Celera
Cytogenetic Map	X	A7.3	NCBI
cM Map	X	38.22	NCBI

FUNDC2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	155,026,844 - 155,060,304 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	155,025,980 - 155,060,304 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	154,255,119 - 154,288,579 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	153,908,258 - 153,938,385 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	153,818,825 - 153,847,085	NCBI
Celera	X	154,413,800 - 154,443,906 (+)	NCBI		Celera
Cytogenetic Map	X	q28	NCBI
HuRef	X	142,800,036 - 142,830,182 (+)	NCBI		HuRef
CHM1_1	X	154,166,689 - 154,196,808 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	153,263,246 - 153,296,709 (+)	NCBI		T2T-CHM13v2.0

Fundc2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	142,829 - 155,123 (-)	NCBI		GRCr8
mRatBN7.2	18	128,473 - 138,232 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	132,248 - 138,345 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	143,997 - 149,596 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	931,838 - 937,437 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	145,906 - 151,505 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	401,878 - 407,954 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	402,295 - 407,954 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	447,139 - 453,204 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	112,408 - 118,067 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	18	125,282 - 130,946 (-)	NCBI		Celera
Cytogenetic Map	18	p13	NCBI

Fundc2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955594	625,701 - 656,400 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955594	627,839 - 656,241 (-)	NCBI	ChiLan1.0	ChiLan1.0

FUNDC2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	155,004,611 - 155,032,998 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	155,008,219 - 155,037,432 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	144,505,703 - 144,534,871 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	154,345,251 - 154,373,806 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	154,345,251 - 154,374,743 (+)	Ensembl	panpan1.1		panPan2

FUNDC2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	123,046,451 - 123,064,580 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	123,045,954 - 123,064,580 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	108,039,832 - 108,057,960 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	126,174,003 - 126,192,133 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	X	121,921,891 - 121,940,021 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	124,444,308 - 124,462,462 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	124,165,031 - 124,183,161 (+)	NCBI		UU_Cfam_GSD_1.0

Fundc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	119,945,691 - 119,960,506 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936927	304,197 - 318,271 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936927	304,162 - 318,271 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FUNDC2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	125,354,021 - 125,372,610 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	125,354,032 - 125,366,029 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	143,117,012 - 143,129,015 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FUNDC2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	129,315,315 - 129,342,395 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	129,315,465 - 129,342,193 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666065	67,293,273 - 67,320,970 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fundc2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624963	226,564 - 251,113 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624963	223,145 - 250,841 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Fundc2
301 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1045
Count of miRNA genes:	603
Interacting mature miRNAs:	728
Transcripts:	ENSMUST00000033541, ENSMUST00000123540, ENSMUST00000147998
Prediction methods:	Miranda, Pita, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4141630	Gct6_m	granulosa cell tumorigenesis 6 (mouse)			Not determined			47179121	129764756	Mouse
13464140	Hdlq108_m	HDL QTL 108 (mouse)					X	57771960	91771960	Mouse
25314311	Syncl3_m	synaptonemal complex length 3 (mouse)					X	51988877	89743606	Mouse
13824980	Ferq1_m	genetic fertility QTL 1 (mouse)					X	54045360	148782996	Mouse
4142200	Rtwq1_m	reduced testis weight QTL 1 (mouse)			Not determined			41477060	75477203	Mouse
1300794	Spha2_m	sperm head anomaly 2 (mouse)			Not determined		X	39921498	86260137	Mouse
12879918	Shm4_m	sperm head morphology 4 (mouse)					X	72072050	102062720	Mouse
25314318	Sccor2_m	synaptonemal complex length to mean MLH1 count ratio 2 (mouse)					X	70543606	96543606	Mouse
1357433	Dbts2_m	diabetes 2 (mouse)			Not determined		X	7226295	150107038	Mouse
1301278	Bdln1_m	body length 1 (mouse)			Not determined		X	41702106	75702218	Mouse
1300702	Fcsa4_m	femoral cross-sectional area 4 (mouse)			Not determined		X	46027444	80027567	Mouse
25314316	Mlh1fc3_m	MLH1 foci count 3 (mouse)					X	61343606	89843606	Mouse
10412108	Desp5_m	despair 5 (mouse)			Not determined		X	54722351	88722351	Mouse
1357730	Hstx1_m	hybrid sterility, X chromosome 1 (mouse)			Not determined		X	71453852	77600812	Mouse
13208567	Bmiq12_m	body mass index QTL 12 (mouse)					X	35263653	77043606	Mouse
4141665	Mhysq2_m	male hybrid sterility QTL 2 (mouse)			Not determined			71453852	139203212	Mouse

Markers in Region

px-72f2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	X	75,387,769 - 75,387,892	UniSTS	GRCm38
MGSCv37	X	72,633,108 - 72,633,231	UniSTS	GRCm37
Celera	X	66,788,545 - 66,788,668	UniSTS

px-72f7

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	X	75,387,519 - 75,387,858	UniSTS	GRCm38
MGSCv37	X	72,632,858 - 72,633,197	UniSTS	GRCm37
Celera	X	66,788,295 - 66,788,634	UniSTS

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_026126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC124025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK013460	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK014705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK031214	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK076262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL731844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY234858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC042794	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC049566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC061464	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY124891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000033541 ⟹ ENSMUSP00000033541

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	74,426,005 - 74,440,065 (+)	Ensembl
GRCm38.p6 Ensembl	X	75,382,399 - 75,396,459 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000123540

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	74,430,708 - 74,437,934 (+)	Ensembl
GRCm38.p6 Ensembl	X	75,387,102 - 75,394,328 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000147998

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	X	74,426,028 - 74,431,081 (+)	Ensembl
GRCm38.p6 Ensembl	X	75,382,422 - 75,387,475 (+)	Ensembl

RefSeq Acc Id:

NM_026126 ⟹ NP_080402

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	X	74,426,005 - 74,440,764 (+)	NCBI
GRCm38	X	75,382,399 - 75,397,158 (+)	ENTREZGENE
MGSCv37	X	72,627,738 - 72,642,497 (+)	RGD
Celera	X	66,783,170 - 66,799,149 (+)	RGD
cM Map	X		ENTREZGENE

Sequence:

show sequence

ATACTAGGGTCCCCCCCCCCCCCGCGCCCCCGAAATGGCCGCTAACAGTCAAGGAAACTTTGAT
GGAAAATTTGAAGCACTGGATCTTGCAGAATTAACTAAAAAACAACCATGGTGGCGTAAGCTGT
TTGGGCAGGAATCTGGGCCATCAGCTGAAAAATATAGTGTAGCAACCCAGCTGGTAATTGGGGG
TGTTACTGGATGGTGCACTGGTTTCGTATTCCAGAAGGTTGGAAAATTGGCTGCAACAGCTGTA
GGAGGTGGATTCTTTCTCCTTCAGCTGGCAAACCATACTGGATACATCAAAGTTGACTGGCAAA
GAGTAGAAAAAGACATGAAGAAAGCCAAAGAGCAGTTGAAAATTCGTAAGAATAAGCAAATACC
AACTGAGGTCAAGAGCAAAGCTGAGGAGGTTGTATCATTTGTAAAGAAGAATGTTCTAGTGACT
GGAGGATTTTTTGGAGGCTTTCTGCTTGGCATGGCATCCTAAGAACTTCACTTCATTGTTCTAT
TTTTATAGTTGTTTGTTTCTTGCCAGCAGCTTCTACACTCCAACATAGGACAATCGGCACTCCT
CTTCCTCATCTTCTCCTGTGCCTTCCTCCCTGTTGTAGCAAATCTGAATGGCTTTAATAGGCTT
CTCCTGGTGCAAGGTCTTCTCAGGCCTTCTCAATTTAACACGTTGGAAGAGACAGTAGGTGTTA
ACTCTTCCAGTACCCTCCTTACTTGGTTGGTGTGTAGCTTAACAAGAATGTTCCTTTTCCCCTA
TGTAAGATCCTTTTCCAAACTCAATTTGTTACCTTATTACATGTTACATGAAAAGGAACCAAAT
ACATTTGCCTTTAAGCATGAAAAAATTTTGGTATCTTGGTGTATGCTTTCTTTTTAAATTGGTT
TTAGGCTATAGAAAGAGAGGTATTTATACTTACTATAATTATGTTGCCAAAATGGCAGTGTAAG
TACCAACACTAAAAATATTAAATGAACTTCTGCAAACAATGCATGAAGTAATATAAGTATTATA
TATGGTAGGTGGGTCTTTATGGAAACCAGCTGTAAGAACTTCATGAAATACAACATTTAAGCAA
GAATTTGAAATGTATTTCTTTTACATACGAGTACTCTATCTGCATGTTCAACTCTGTGCCAAAT
CCCATTACAGATGGTTGTAAGCCACCATGTGGTTGCTGGGAATTGGACTTAGGACCACTTGAAG
AGCAACCAGTGCTCTTAACTGCTGAGCATCTCTCCAGTCCCTTAAGCAAAAATTTTAAAGAGAT
GTTCCAGGCATTCAGAATAAGAATAGCATATGTGTAATAAATTATTTTCATCAAATGCAATCTC
CATCAGAAATATTGCTTAATATAAAAATCCATGTATACTTTACATTATTCCATAATAGCTATTA
CCATGAGCTCAACTCCAACTACAAAAGCATCTTCCAGAAGTTAAGTCTTCTATCATCTTCATTA
TACCCACAGGGCTTACTGCTTAATAGATTTCAAATATTTTTGAATATATTAATTGTATAAAGAA
AGCTTCCCGTTAAAGGTTAGGTTTACCTCAAATGAATTCTTAGATATGTAGATGATCCTTTGTG
CAATAGTATATTTTTAAGGTCATACATTAAGCATAATTACTTTTTTGACATACCTTAACATTGA
CATACTTTTGAAAATTGAAACTACCAGTGGATGTGTAAAACTAATTAGGATTCACCTATTTGCA
TTTCCTCACTACGTTTTGATTTTATTTGAGCCAATATAAGTTATTCTACTTGTAATACATATTA
ATCATCTTTCCTTACATGGTAGTATAACCAGCCTTGGTATATATTTTTCTCAAAAATTTGAAGA
TGATTTTTCACTATTTACTGTGGAAACATAAAGAGAGTACAGTGATTTCCCCAAGTATCCATTG
CTTGCCTATAGCAATCATGTAATTGTATTTTTTATCAATTATTATAATATACCTGCCATTTTAT
TGTTTGCCATATGTATTCAATACTAAAAATCTAAATATTTTTTTGTTTTAAAACTTTAAAAAAG
GGCTGGAGAGATGGCTTAGCCATTAAAGGCTAGGCTCACAACCAAAAGTATAAAACTTTTAAAA
AAATCATAATACCTTTTTATTACAGAAAAATTAATAATGGTTAATGTCAAAACCATGCAGTATT
TAAAATCCTCTTTGTATGTACAATATATTTATTGACACCTGTGTGCTATCATCTGTTTTATAGT
TCTTTGTATTCTTCTTGGGGTTGTGCCATTTATGGTGATTCTTGATGTAGCCATGTTGTTCTCC
CTGTGTCTTAAGTATCATTGGCATGGTGAGAGCAAAAGCTACTGCAATGCCCCTTTGGGTATGT
GGTGAGGAGTGGTCATCTAGTATCTCTCTAGTGGGTTGGTAGCTGACTTCTGATCCATCTGCTT
TCTTTCTGATTAATAGGGGTTACAACTAATAGACTAGTGGACTGGAGTTCCTTCAAAAGGTTAT
AATAGGTAATGGTCTAGACTCACATTCTACCCTGGTCTGAAATAAAATCTATAATTCTATCCTC
AAGTTGGTCAGACTCCACTTGTGTTTGTGTAGAGGTGGTGCAGAGGGTTATTAGTCACAATTAG
CACACTTCAAGCTCCAGTTTAGGTCAGTGGTTAGTGAAGTAGCCTCAAGCAGTTTGGGGAACCT
CTATTGAGGGCTCATTGAGTCAGCATCTTTGCTTCATCTTAAATGGGAGATTACTGGGGATGTA
GCTCAGTGGTAAAGCATTTACCTAGTGTTTGTGAGGGCCTGGGTTCAATCACCAACATTGTGAG
AACAGAATAGCCAAGCAGGCTTGAGTTTAAATGGGAGATTACATTTTCTGAAAAAAGCAGGTAG
CTGTCTTTCCATGCACAACCTAAATGTTACCAGGGTGAGGCAGTTACACTATTGAATACATTTG
GTTTTGATTAGTGTTAATGTTTTCAATGAAAATGACCCCCATAGTCTCATAGGGAATGACACTA
ATAGGAGGTGTGTCCTTGTTGAAAGTAGGTGTACCTTATTGGAGGAAGTTTGTCACTGGGAGTG
GGATTGAGGTTTCAGAAGATCAAGCAAGGCCTAGTGGTTCATTCTCTTGCCTACTGATCCAGAT
GTAAAGCTCAGTCCTTTCTCTAACACTGTGTCTGCCTGCCTAGATGATAGATGCTTCCCACCAT
AATGATAATGGACTAAACCTCTGAACTGTAAGCCAACCCCAATTAAATGTTTTCGTTTATA

hide sequence

Protein Sequences


Protein RefSeqs	NP_080402	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH42794	(Get FASTA)	NCBI Sequence Viewer
	AAH49566	(Get FASTA)	NCBI Sequence Viewer
	AAH61464	(Get FASTA)	NCBI Sequence Viewer
	AAO89275	(Get FASTA)	NCBI Sequence Viewer
	BAB28867	(Get FASTA)	NCBI Sequence Viewer
	BAB29513	(Get FASTA)	NCBI Sequence Viewer
	BAC27304	(Get FASTA)	NCBI Sequence Viewer
	EDL29228	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000033541
	ENSMUSP00000033541.5
GenBank Protein	Q9D6K8	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_080402 ⟸ NM_026126
- UniProtKB:	Q8BSM8 (UniProtKB/Swiss-Prot), Q80YD9 (UniProtKB/Swiss-Prot), Q80VT2 (UniProtKB/Swiss-Prot), Q9D617 (UniProtKB/Swiss-Prot), Q9D6K8 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAANSQGNFDGKFEALDLAELTKKQPWWRKLFGQESGPSAEKYSVATQLVIGGVTGWCTGFVFQ KVGKLAATAVGGGFFLLQLANHTGYIKVDWQRVEKDMKKAKEQLKIRKNKQIPTEVKSKAEEVV SFVKKNVLVTGGFFGGFLLGMAS hide sequence

Ensembl Acc Id:

ENSMUSP00000033541 ⟸ ENSMUST00000033541

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9D6K8-F1-model_v2	AlphaFold	Q9D6K8	1-151	view protein structure

Promoters

RGD ID:

13680820

Promoter ID:

EPDNEW_M24559

Type:

multiple initiation site

Name:

Fundc2_1

Description:

Mus musculus FUN14 domain containing 2 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	X	75,382,417 - 75,382,477	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1914641	AgrOrtholog
Ensembl Genes	ENSMUSG00000031198	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000033541	ENTREZGENE
	ENSMUST00000033541.5	UniProtKB/Swiss-Prot
InterPro	FUN14	UniProtKB/Swiss-Prot
KEGG Report	mmu:67391	UniProtKB/Swiss-Prot
MGD	MGI:1914641	ENTREZGENE
NCBI Gene	67391	ENTREZGENE
PANTHER	FUN14 DOMAIN-CONTAINING PROTEIN 2	UniProtKB/Swiss-Prot
	PTHR21346	UniProtKB/Swiss-Prot
Pfam	FUN14	UniProtKB/Swiss-Prot
PhenoGen	Fundc2	PhenoGen
UniProt	FUND2_MOUSE	UniProtKB/Swiss-Prot
	Q80VT2	ENTREZGENE
	Q80YD9	ENTREZGENE
	Q8BSM8	ENTREZGENE
	Q9D617	ENTREZGENE
	Q9D6K8	ENTREZGENE
UniProt Secondary	Q80VT2	UniProtKB/Swiss-Prot
	Q80YD9	UniProtKB/Swiss-Prot
	Q8BSM8	UniProtKB/Swiss-Prot
	Q9D617	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype