LOC127889946 (H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:2048181-2048837) - Rat Genome Database

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Gene: LOC127889946 (H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:2048181-2048837) Homo sapiens
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Symbol: LOC127889946
Name: H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:2048181-2048837
RGD ID: 155752009
Description: This genomic region was validated as an active enhancer by the ChIP-STARR-seq massively parallel reporter assay in primed human embryonic stem cells. This enhancer is marked by the H3K27ac and H3K4me1 histone modifications. [provided by RefSeq, Dec 2022]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38192,048,182 - 2,048,838 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37192,048,181 - 2,048,837 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.0192,021,255 - 2,021,911 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30033119  


Genomics

Variants

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Variants in LOC127889946
2 total Variants

QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298499UAE1_HUrinary albumin excretion QTL 1 (human)2.730.0009Urinary albumin excretionurine albumin:creatinine ratio (ACR)19116075902Human
406914625GWAS563601_Hskin hydration measurement QTL GWAS563601 (human)0.000007skin hydration measurementskin water level (CMO:0002766)1920485992048600Human
1643451SLIPL6_HSerum lipid level QTL 6 (human)2.190.0008Lipid level19116075902Human
406951811GWAS600787_Hwellbeing measurement QTL GWAS600787 (human)0.000003wellbeing measurement1920482822048283Human
1581534BP76_HBlood pressure QTL 76 (human)20.001Blood pressurepulse pressure19116075902Human
1581535BP65_HBlood pressure QTL 65 (human)3.10.001Blood pressurepulse pressure19116075902Human
2314591INSUL4_HInsulin level QTL 4 (human)3.80.000038Insulin levelfasting19116075902Human
1298476BP3_HBlood pressure QTL 3 (human)2.4Blood pressuresystolic19116075902Human


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC LOC127889946 COSMIC
GTEx LOC127889946 GTEx
Human Proteome Map LOC127889946 Human Proteome Map
NCBI Gene LOC127889946 ENTREZGENE