Slc44a4 (solute carrier family 44, member 4) - Rat Genome Database

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Gene: Slc44a4 (solute carrier family 44, member 4) Mus musculus
Analyze
Symbol: Slc44a4
Name: solute carrier family 44, member 4
RGD ID: 1557086
MGI Page MGI
Description: Enables thiamine pyrophosphate transmembrane transporter activity. Involved in thiamine pyrophosphate transmembrane transport. Predicted to be located in apical plasma membrane. Predicted to be active in plasma membrane. Is expressed in embryo. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 72. Orthologous to human SLC44A4 (solute carrier family 44 member 4).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2210409B01Rik; choline transporter-like protein 4; mTPPT1; NG2; NG22; solute carrier family 44 member 4; thiamine pyrophosphate transporter 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391735,133,200 - 35,149,412 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1735,133,442 - 35,149,412 (+)EnsemblGRCm39 Ensembl
GRCm381734,914,224 - 34,930,436 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,914,466 - 34,930,436 (+)EnsemblGRCm38mm10GRCm38
MGSCv371735,051,411 - 35,067,381 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,522,536 - 34,538,412 (+)NCBIMGSCv36mm8
Celera1738,010,698 - 38,026,669 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.46NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,1-dichloroethene  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
amiodarone  (ISO)
aristolochic acid A  (ISO)
asbestos  (ISO)
Azoxymethane  (EXP)
Benzo[ghi]perylene  (EXP)
beta-lapachone  (ISO)
beta-naphthoflavone  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
butan-1-ol  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
CGP 52608  (ISO)
chlordecone  (EXP)
chloropicrin  (ISO)
choline  (EXP)
Cuprizon  (ISO)
cyclosporin A  (ISO)
desferrioxamine B  (ISO)
dextran sulfate  (EXP)
diethyl maleate  (ISO)
diethylstilbestrol  (EXP)
dioxygen  (ISO)
elemental selenium  (ISO)
endosulfan  (ISO)
folic acid  (EXP)
fonofos  (ISO)
furan  (ISO)
genistein  (EXP)
glyphosate  (ISO)
hydrogen peroxide  (ISO)
indole-3-methanol  (ISO)
L-methionine  (EXP)
Licochalcone B  (ISO)
menadione  (ISO)
N(4)-hydroxycytidine  (EXP)
N-nitrosodiethylamine  (ISO)
p-toluidine  (ISO)
parathion  (ISO)
pirinixic acid  (EXP,ISO)
potassium dichromate  (EXP)
resveratrol  (ISO)
selenium atom  (ISO)
sodium arsenite  (EXP)
sulforaphane  (EXP)
terbufos  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
triptonide  (EXP)
urethane  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10871872   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:14656967   PMID:14681479   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:18799693   PMID:20562862   PMID:21267068   PMID:21873635   PMID:24379411   PMID:26901654   PMID:38355793   PMID:38713615  


Genomics

Comparative Map Data
Slc44a4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391735,133,200 - 35,149,412 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1735,133,442 - 35,149,412 (+)EnsemblGRCm39 Ensembl
GRCm381734,914,224 - 34,930,436 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,914,466 - 34,930,436 (+)EnsemblGRCm38mm10GRCm38
MGSCv371735,051,411 - 35,067,381 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,522,536 - 34,538,412 (+)NCBIMGSCv36mm8
Celera1738,010,698 - 38,026,669 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.46NCBI
SLC44A4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38631,863,192 - 31,878,997 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl631,863,192 - 31,879,046 (-)EnsemblGRCh38hg38GRCh38
GRCh37631,830,969 - 31,846,774 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36631,938,948 - 31,954,802 (-)NCBINCBI36Build 36hg18NCBI36
Build 34631,938,953 - 31,954,753NCBI
Celera633,429,555 - 33,445,404 (-)NCBICelera
Cytogenetic Map6p21.33NCBI
HuRef631,616,782 - 31,632,627 (-)NCBIHuRef
CHM1_1631,833,110 - 31,848,964 (-)NCBICHM1_1
T2T-CHM13v2.0631,716,432 - 31,732,232 (-)NCBIT2T-CHM13v2.0
Slc44a4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8203,907,737 - 3,923,911 (-)NCBIGRCr8
mRatBN7.2203,903,099 - 3,919,215 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl203,903,099 - 3,919,215 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx204,603,033 - 4,619,120 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0203,964,775 - 3,980,862 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0204,501,983 - 4,518,066 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0204,593,389 - 4,609,641 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl204,593,389 - 4,609,631 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0206,673,376 - 6,689,628 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4204,005,154 - 4,021,270 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1204,005,380 - 4,021,497 (-)NCBI
Celera204,110,301 - 4,126,373 (+)NCBICelera
Cytogenetic Map20p12NCBI
Slc44a4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955437383,271 - 397,217 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955437383,523 - 396,456 (-)NCBIChiLan1.0ChiLan1.0
SLC44A4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2546,342,553 - 46,354,982 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1642,303,767 - 42,316,468 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0631,526,660 - 31,542,165 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1632,413,441 - 32,428,550 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl632,413,441 - 32,428,550 (-)Ensemblpanpan1.1panPan2
SLC44A4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1121,328,276 - 1,340,752 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl121,328,399 - 1,340,778 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha121,463,542 - 1,476,028 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0121,470,452 - 1,482,939 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl121,466,890 - 1,483,011 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1121,328,172 - 1,340,646 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0121,396,104 - 1,408,588 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0121,461,326 - 1,474,043 (-)NCBIUU_Cfam_GSD_1.0
Slc44a4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494635,878,349 - 35,897,867 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367271,663,747 - 1,682,941 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367271,663,593 - 1,683,061 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC44A4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl723,958,942 - 23,977,482 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1723,958,935 - 23,977,466 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2727,834,744 - 27,853,364 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC44A4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11740,142,349 - 40,158,024 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1740,142,730 - 40,157,858 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604431,777,498 - 31,794,091 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc44a4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475424,368,716 - 24,382,397 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475424,368,697 - 24,381,959 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:481
Count of miRNA genes:311
Interacting mature miRNAs:344
Transcripts:ENSMUST00000007249, ENSMUST00000169230, ENSMUST00000173664
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172787811943885114Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173311897454107028Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172771579245622654Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3098790348039703Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172507658355712970Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172558491443976235Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1302189Dps3_mdelta power in slow-wave sleep 3 (mouse)Not determined173381972136250180Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1300692Blmpf1_mbleomycin-induced pulmonary fibrosis 1 (mouse)Not determined173206165237644775Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172650533741105037Mouse
25394538Skmw84_mskeletal muscle weight 84, TA (mouse)173266042635520036Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1301759Sles1_msystemic lupus erythmatosus suppressor 1 (mouse)Not determined173421989035175937Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172640101252911704Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse

Markers in Region
D17Ertd710e  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,913,812 - 34,914,036UniSTSGRCm38
MGSCv371735,050,757 - 35,050,981UniSTSGRCm37
Celera1738,010,044 - 38,010,268UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map17B2UniSTS
cM Map1718.0UniSTS
cM Map1718.87UniSTS
UniSTS:237636  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,912,665 - 34,912,806UniSTSGRCm38
MGSCv371735,049,610 - 35,049,751UniSTSGRCm37
Celera1738,008,897 - 38,009,038UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.87UniSTS
Slc44a4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17B2UniSTS
cM Map1718.46UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000007249   ⟹   ENSMUSP00000007249
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,133,446 - 35,149,332 (+)Ensembl
GRCm38.p6 Ensembl1734,914,470 - 34,930,356 (+)Ensembl
Ensembl Acc Id: ENSMUST00000169230   ⟹   ENSMUSP00000132965
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,136,695 - 35,149,412 (+)Ensembl
GRCm38.p6 Ensembl1734,917,719 - 34,930,436 (+)Ensembl
Ensembl Acc Id: ENSMUST00000173664
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,133,442 - 35,149,355 (+)Ensembl
GRCm38.p6 Ensembl1734,914,466 - 34,930,379 (+)Ensembl
RefSeq Acc Id: NM_023557   ⟹   NP_076046
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,133,442 - 35,149,412 (+)NCBI
GRCm381734,914,466 - 34,930,436 (+)NCBI
MGSCv371735,051,411 - 35,067,381 (+)RGD
Celera1738,010,698 - 38,026,669 (+)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006524885   ⟹   XP_006524948
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,133,200 - 35,149,335 (+)NCBI
GRCm381734,914,224 - 34,930,359 (+)NCBI
Sequence:
RefSeq Acc Id: NP_076046   ⟸   NM_023557
- UniProtKB: Q91VA1 (UniProtKB/Swiss-Prot),   Q7TQ02 (UniProtKB/Swiss-Prot),   Q9CVA7 (UniProtKB/Swiss-Prot),   Q3ULA4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524948   ⟸   XM_006524885
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSMUSP00000007249   ⟸   ENSMUST00000007249
Ensembl Acc Id: ENSMUSP00000132965   ⟸   ENSMUST00000169230

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q91VA1-F1-model_v2 AlphaFold Q91VA1 1-707 view protein structure

Promoters
RGD ID:13675760
Promoter ID:EPDNEW_M22029
Type:multiple initiation site
Name:Slc44a4_1
Description:Mus musculus solute carrier family 44, member 4 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381734,914,470 - 34,914,530EPDNEW
RGD ID:6828693
Promoter ID:MM_KWN:23244
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Lung,   MEF_B4
Transcripts:NM_023557
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,050,546 - 35,051,867 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1917379 AgrOrtholog
Ensembl Genes ENSMUSG00000007034 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000007249 ENTREZGENE
  ENSMUST00000007249.15 UniProtKB/Swiss-Prot
  ENSMUST00000169230.2 UniProtKB/TrEMBL
InterPro Choline_transptr-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:70129 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1917379 ENTREZGENE
NCBI Gene 70129 ENTREZGENE
PANTHER CHOLINE TRANSPORTER-LIKE PROTEIN 4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12385 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Choline_transpo UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slc44a4 PhenoGen
UniProt CTL4_MOUSE UniProtKB/Swiss-Prot
  E9PWK0_MOUSE UniProtKB/TrEMBL
  Q3TL93_MOUSE UniProtKB/TrEMBL
  Q3ULA4 ENTREZGENE, UniProtKB/TrEMBL
  Q7TQ02 ENTREZGENE
  Q91VA1 ENTREZGENE
  Q9CVA7 ENTREZGENE
UniProt Secondary Q7TQ02 UniProtKB/Swiss-Prot
  Q9CVA7 UniProtKB/Swiss-Prot