Bmf (BCL2 modifying factor) - Rat Genome Database

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Gene: Bmf (BCL2 modifying factor) Mus musculus
Analyze
Symbol: Bmf
Name: BCL2 modifying factor
RGD ID: 1553883
MGI Page MGI
Description: Involved in several processes, including negative regulation of autophagic cell death; negative regulation of autophagy; and positive regulation of cellular component organization. Acts upstream of or within negative regulation of apoptotic signaling pathway and positive regulation of apoptotic signaling pathway. Located in actin cytoskeleton and cytoplasm. Part of myosin complex. Is expressed in brain; lung; and pituitary gland. Orthologous to human BMF (Bcl2 modifying factor).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AW260063; AW411872; bcl-2-modifying factor
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392118,359,238 - 118,385,240 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2118,359,238 - 118,380,168 (-)EnsemblGRCm39 Ensembl
GRCm382118,528,757 - 118,549,686 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2118,528,757 - 118,549,687 (-)EnsemblGRCm38mm10GRCm38
MGSCv372118,354,493 - 118,375,414 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362118,220,198 - 118,241,119 (-)NCBIMGSCv36mm8
Celera2119,683,712 - 119,704,619 (-)NCBICelera
Cytogenetic Map2E5NCBI
cM Map259.4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(-)-alpha-phellandrene  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (EXP,ISO)
1H-pyrazole  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-methylcholanthrene  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-amino-2,6-dinitrotoluene  (ISO)
4-aminopyridine  (ISO)
5-aza-2'-deoxycytidine  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acetylsalicylic acid  (ISO)
adefovir pivoxil  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-phellandrene  (ISO)
amiodarone  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
antimycin A  (ISO)
Aroclor 1254  (ISO)
arsenous acid  (ISO)
azoxystrobin  (ISO)
benzbromarone  (ISO)
benzo[a]pyrene  (ISO)
Benzo[k]fluoranthene  (EXP)
bis(2-chloroethyl) sulfide  (EXP)
bisphenol A  (EXP,ISO)
bromobenzene  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (EXP)
chloroacetaldehyde  (ISO)
chlorpyrifos  (EXP)
chromium(6+)  (ISO)
cidofovir anhydrous  (ISO)
ciguatoxin CTX1B  (EXP)
cisplatin  (ISO)
clofibrate  (EXP,ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
cypermethrin  (EXP,ISO)
DDT  (ISO)
deguelin  (ISO)
depsipeptide  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
dichloroacetic acid  (EXP)
diethyl maleate  (ISO)
diethylstilbestrol  (EXP)
dioxygen  (EXP,ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
epoxiconazole  (EXP)
estriol  (EXP)
fenofibrate  (ISO)
fenpyroximate  (ISO)
FR900359  (ISO)
furan  (EXP,ISO)
genistein  (ISO)
gentamycin  (ISO)
inulin  (EXP)
iron dichloride  (ISO)
isoprenaline  (ISO)
L-ethionine  (ISO)
leflunomide  (ISO)
lidocaine  (ISO)
lipopolysaccharide  (EXP)
manganese(II) chloride  (ISO)
metformin  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
N-nitrosodiethylamine  (EXP)
nickel dichloride  (ISO)
niclosamide  (ISO)
O-methyleugenol  (ISO)
omeprazole  (ISO)
ozone  (EXP)
p-menthan-3-ol  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP)
picoxystrobin  (ISO)
pinostrobin  (ISO)
pirinixic acid  (EXP,ISO)
potassium bromate  (EXP)
potassium dichromate  (EXP)
progesterone  (EXP)
propiconazole  (EXP)
propionic acid  (ISO)
pyrazinecarboxamide  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
Se-methyl-L-selenocysteine  (EXP,ISO)
Se-methylselenocysteine  (EXP,ISO)
silicon dioxide  (EXP,ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenate  (EXP)
sodium arsenite  (EXP)
sodium dichromate  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tebufenpyrad  (ISO)
tetrachloromethane  (ISO)
tetraphene  (EXP)
thapsigargin  (ISO)
thifluzamide  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
tributylstannane  (EXP)
trichloroethene  (EXP,ISO)
trichostatin A  (ISO)
Triptolide  (EXP)
triptonide  (EXP)
tris(2-butoxyethyl) phosphate  (ISO)
troglitazone  (EXP)
trovafloxacin  (EXP)
urethane  (ISO)
valdecoxib  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
vorinostat  (ISO)
zearalenone  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. BH3-only proteins in apoptosis and beyond: an overview. Lomonosova E and Chinnadurai G, Oncogene. 2008 Dec;27 Suppl 1:S2-19.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11546872   PMID:12477932   PMID:14561217   PMID:14574334   PMID:14610273   PMID:14634621   PMID:15489334  
PMID:15694340   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16645638   PMID:16697956   PMID:16909112   PMID:17360431   PMID:17634411   PMID:18299399   PMID:18462686   PMID:18799693  
PMID:19129488   PMID:19841067   PMID:19965635   PMID:20664053   PMID:20706276   PMID:21041309   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22210314   PMID:22219353   PMID:22430207  
PMID:22960223   PMID:23000175   PMID:23180554   PMID:23618904   PMID:23629966   PMID:24483844   PMID:24571986   PMID:24632712   PMID:25299781   PMID:25694434   PMID:25698446   PMID:26045049  
PMID:26917450   PMID:27035620   PMID:27044867   PMID:27621418   PMID:28771225   PMID:29141222   PMID:29654210   PMID:29749531   PMID:30728831   PMID:30970248   PMID:31093317   PMID:31189926  
PMID:34462553   PMID:35361962  


Genomics

Comparative Map Data
Bmf
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392118,359,238 - 118,385,240 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2118,359,238 - 118,380,168 (-)EnsemblGRCm39 Ensembl
GRCm382118,528,757 - 118,549,686 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2118,528,757 - 118,549,687 (-)EnsemblGRCm38mm10GRCm38
MGSCv372118,354,493 - 118,375,414 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362118,220,198 - 118,241,119 (-)NCBIMGSCv36mm8
Celera2119,683,712 - 119,704,619 (-)NCBICelera
Cytogenetic Map2E5NCBI
cM Map259.4NCBI
BMF
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381540,087,890 - 40,108,879 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1540,087,890 - 40,108,892 (-)EnsemblGRCh38hg38GRCh38
GRCh371540,380,091 - 40,401,080 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361538,167,383 - 38,188,367 (-)NCBINCBI36Build 36hg18NCBI36
Build 341538,167,385 - 38,185,931NCBI
Celera1517,145,999 - 17,167,002 (-)NCBICelera
Cytogenetic Map15q15.1NCBI
HuRef1517,223,445 - 17,244,440 (-)NCBIHuRef
CHM1_11540,499,972 - 40,520,967 (-)NCBICHM1_1
T2T-CHM13v2.01537,894,726 - 37,915,713 (-)NCBIT2T-CHM13v2.0
Bmf
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83125,953,466 - 125,974,087 (-)NCBIGRCr8
mRatBN7.23105,499,534 - 105,520,159 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3105,499,538 - 105,520,145 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3109,173,179 - 109,193,801 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03117,768,734 - 117,789,356 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03115,429,111 - 115,449,729 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03110,303,515 - 110,324,125 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3110,306,067 - 110,324,084 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03116,849,170 - 116,869,775 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43104,966,652 - 104,984,752 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13104,863,079 - 104,881,180 (-)NCBI
Celera3104,419,059 - 104,437,108 (-)NCBICelera
Cytogenetic Map3q35NCBI
Bmf
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554167,052,290 - 7,068,910 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554167,048,654 - 7,068,917 (-)NCBIChiLan1.0ChiLan1.0
BMF
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21629,326,014 - 29,346,967 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11533,477,360 - 33,498,321 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01519,026,053 - 19,047,008 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11537,281,655 - 37,302,365 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1537,281,655 - 37,302,075 (-)Ensemblpanpan1.1panPan2
BMF
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1307,301,000 - 7,321,949 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl307,274,174 - 7,322,034 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha307,355,731 - 7,376,675 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0307,429,431 - 7,450,406 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl307,402,587 - 7,450,406 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1307,351,934 - 7,372,873 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0307,458,286 - 7,479,257 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0307,586,431 - 7,607,394 (-)NCBIUU_Cfam_GSD_1.0
Bmf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864085,725,364 - 85,746,902 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364713,577,221 - 3,594,981 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364713,573,437 - 3,594,438 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BMF
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1131,178,315 - 131,200,393 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11131,178,021 - 131,199,668 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
BMF
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12642,893,997 - 42,915,062 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2642,894,460 - 42,915,062 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604898,040,714 - 98,061,923 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bmf
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248047,423,547 - 7,440,014 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248047,420,003 - 7,440,012 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Bmf
799 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4292
Count of miRNA genes:827
Interacting mature miRNAs:1137
Transcripts:ENSMUST00000090219, ENSMUST00000110859, ENSMUST00000125860, ENSMUST00000138342, ENSMUST00000143583, ENSMUST00000146962, ENSMUST00000152123, ENSMUST00000154521
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301905Lgth2_mbody length 2 (mouse)Not determined2111173704145173821Mouse
1302033Nsv1_mNeuroadapted Sindbis viral RNA level 1 (mouse)Not determined2111623386145623526Mouse
12904007Cfq7_mconditioned fear QTL 7 (mouse)2118356772125048872Mouse
13506762Tbvq2_mtrabecular bone volume QTL 2 (mouse)2115430481124741920Mouse
13824983Vclq1_mcurvilinear velocity QTL 1 (mouse)261830344136841920Mouse
1301909Smdq2_msegregation of mitochondrial DNA QTL 2 (mouse)Not determined292778465126778607Mouse
11039520Ltpr2h_mLeishmania tropica response 2h (mouse)2112212746146213005Mouse
11039521Ltpr2g_mLeishmania tropica response 2g (mouse)2115212857149212994Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
11532731Sluc31a_msusceptibility to lung cancer 31a (mouse)288015003122015170Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294230345154241920Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357577Trmq3_mT cell ratio modifier QTL 3 (mouse)Not determined260520612119355518Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
12904935Edlmmq2_mextensor digitorum longus muscle mass QTL 2 (mouse)297210364131210364Mouse
1302071Fembrs1_mfemur breaking strength 1 (mouse)Not determined2100942930134943090Mouse
10045885Cplaq15_mcircadian period of locomotor activity 15 (mouse)Not determined2110916118154354667Mouse
1302203Gvhd3_mgraft-versus host disease 3 (mouse)Not determined2100942930134943090Mouse
1300793Pcfm2_mperiosteal circumference and femur length 2 (mouse)Not determined2111173704145173821Mouse
10412082Hylaq1_mHyperlocomotor activity related QTL 1 (mouse)Not determined284013198148667470Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1300798Actre3_mactivity response to ethanol 3 (mouse)Not determined2112024987128173821Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
4142223Femwf4_mfemur work to failure 4 (mouse)Not determined88143423122143570Mouse
1301415Actre4_mactivity response to ethanol 4 (mouse)Not determined2112024987128173821Mouse
1301029T2dm3_mtype 2 diabetes mellitus 3 (mouse)Not determined2114288075132714157Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
1301295Prdt1_mprion disease incubation time 1 (mouse)Not determined2116077623150077741Mouse
12904954Gmmq2_mgastrocnemius muscle mass QTL 2 (mouse)297210364131210364Mouse
1558825Aabpr_maberrant activation of B cell proliferation (mouse)Not determined2116033229122207534Mouse
11038696Ltpr2f_mLeishmania tropica response 2f (mouse)2115212857149212994Mouse
11038697Ltpr2d_mLeishmania tropica response 2d (mouse)286095716120095823Mouse
1301330Tbbmd2_mtotal body bone mineral density 2 (mouse)Not determined2100942930134943090Mouse
11038698Ltpr2c_mLeishmania tropica response 2c (mouse)286095716120095823Mouse
1301201Chab1_mcholesterol absorption 1 (mouse)Not determined2111551028145551163Mouse
11038699Ltpr2b_mLeishmania tropica response 2b (mouse)2112212746146213005Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
11038700Ltpr2a_mLeishmania tropica response 2a (mouse)2112212746146213005Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
11049568Lmr28c_mleishmaniasis resistance 28c (mouse)297123370131123532Mouse
11049569Lmr28d_mleishmaniasis resistance 28d (mouse)297123370131123532Mouse
11528549Sluc31_msusceptibility to lung cancer 31 (mouse)274524117129213005Mouse
1301087Bbaa15_mB.burgdorferi-associated arthritis 15 (mouse)Not determined2110489658144489807Mouse
1301825Pbrgcsf1_mperipheral blood stem cell response to granulocyte colony stimulating factor 1 (mouse)Not determined2106233580140233729Mouse
4141802Ignpq1_mIgA nephropathy QTL 1 (mouse)Not determined2100824060134824269Mouse
1301834Bits1_mbitterness sensitivity 1 (mouse)Not determined287440643121440778Mouse
1558990Skmw9_mskeletal muscle weight 9 (mouse)Not determined2111173704145173821Mouse
11041906Lmr28a_mleishmaniasis resistance 28a (mouse)2103095716129213005Mouse
4141155Plast2b_mplasma plant sterol 2b (mouse)Not determined284013198148522175Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1300852Lmr14_mleishmaniasis resistance 14 (mouse)Not determined286095716120095823Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
1301755Hrq1_mheart rate quantitative locus 1 (mouse)Not determined2111173704145173821Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
11049565Lmr28g_mleishmaniasis resistance 28g (mouse)286095716120095823Mouse
1558881Ses7_msalmonella enteritidis susceptibility 7 (mouse)Not determined2116306330150306474Mouse
1301098Cd8mts3_mCD8 memory T cell subset 3 (mouse)Not determined291089974125090104Mouse
10043875Bw25_mbody weight QTL 25 (mouse)Not determined2107255676141255676Mouse

Markers in Region
AW260063  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382118,528,995 - 118,529,132UniSTSGRCm38
MGSCv372118,354,731 - 118,354,868UniSTSGRCm37
Celera2119,683,950 - 119,684,087UniSTS
Cytogenetic Map2E5UniSTS
Whitehead/MRC_RH21508.49UniSTS
AW411872  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382118,528,995 - 118,529,132UniSTSGRCm38
MGSCv372118,354,731 - 118,354,868UniSTSGRCm37
Celera2119,683,950 - 119,684,087UniSTS
Cytogenetic Map2E5UniSTS
Whitehead/MRC_RH21508.44UniSTS
D15S214  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382118,548,827 - 118,549,089UniSTSGRCm38
MGSCv372118,374,563 - 118,374,825UniSTSGRCm37
Celera2119,703,768 - 119,704,030UniSTS
Cytogenetic Map2E5UniSTS
AW821977  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382118,528,945 - 118,529,183UniSTSGRCm38
MGSCv372118,354,681 - 118,354,919UniSTSGRCm37
Celera2119,683,900 - 119,684,138UniSTS
Cytogenetic Map2E5UniSTS
Whitehead/MRC_RH21508.44UniSTS


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001311140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001424740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001424741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_138313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_138603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036159004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK040622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK089218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL929381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY029253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000090219   ⟹   ENSMUSP00000087686
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2118,359,238 - 118,380,168 (-)Ensembl
GRCm38.p6 Ensembl2118,528,757 - 118,549,687 (-)Ensembl
Ensembl Acc Id: ENSMUST00000110859   ⟹   ENSMUSP00000106483
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2118,360,713 - 118,378,040 (-)Ensembl
GRCm38.p6 Ensembl2118,530,232 - 118,547,559 (-)Ensembl
Ensembl Acc Id: ENSMUST00000125860   ⟹   ENSMUSP00000159051
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2118,363,039 - 118,377,508 (-)Ensembl
GRCm38.p6 Ensembl2118,532,558 - 118,547,027 (-)Ensembl
Ensembl Acc Id: ENSMUST00000138342
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2118,377,390 - 118,380,156 (-)Ensembl
GRCm38.p6 Ensembl2118,546,909 - 118,549,675 (-)Ensembl
Ensembl Acc Id: ENSMUST00000143583
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2118,362,455 - 118,375,068 (-)Ensembl
GRCm38.p6 Ensembl2118,531,974 - 118,544,587 (-)Ensembl
Ensembl Acc Id: ENSMUST00000146962
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2118,375,717 - 118,378,080 (-)Ensembl
GRCm38.p6 Ensembl2118,545,236 - 118,547,599 (-)Ensembl
Ensembl Acc Id: ENSMUST00000152123
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2118,362,903 - 118,380,143 (-)Ensembl
GRCm38.p6 Ensembl2118,532,422 - 118,549,662 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154521
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2118,362,536 - 118,375,797 (-)Ensembl
GRCm38.p6 Ensembl2118,532,055 - 118,545,316 (-)Ensembl
RefSeq Acc Id: NM_001311140   ⟹   NP_001298069
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392118,359,240 - 118,378,041 (-)NCBI
GRCm382118,528,757 - 118,547,599 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001331221   ⟹   NP_001318150
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392118,359,240 - 118,378,041 (-)NCBI
GRCm382118,528,757 - 118,547,599 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001424740   ⟹   NP_001411669
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392118,359,240 - 118,380,156 (-)NCBI
RefSeq Acc Id: NM_001424741   ⟹   NP_001411670
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392118,359,240 - 118,385,240 (-)NCBI
RefSeq Acc Id: NM_138313   ⟹   NP_612186
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392118,359,240 - 118,380,156 (-)NCBI
GRCm382118,528,757 - 118,549,686 (-)NCBI
MGSCv372118,354,493 - 118,375,414 (-)RGD
Celera2119,683,712 - 119,704,619 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_138603
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392118,359,240 - 118,375,082 (-)NCBI
GRCm382118,528,757 - 118,544,587 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036159004   ⟹   XP_036014897
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392118,359,238 - 118,379,996 (-)NCBI
Sequence:
RefSeq Acc Id: NP_612186   ⟸   NM_138313
- Peptide Label: isoform 1
- UniProtKB: A2AV75 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001298069   ⟸   NM_001311140
- Peptide Label: isoform 2
- UniProtKB: A2AV74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001318150   ⟸   NM_001331221
- Peptide Label: isoform 3
- UniProtKB: Q8BUK0 (UniProtKB/Swiss-Prot),   Q91ZE9 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000159051   ⟸   ENSMUST00000125860
Ensembl Acc Id: ENSMUSP00000087686   ⟸   ENSMUST00000090219
Ensembl Acc Id: ENSMUSP00000106483   ⟸   ENSMUST00000110859
RefSeq Acc Id: XP_036014897   ⟸   XM_036159004
- Peptide Label: isoform X2
- UniProtKB: Q91ZE9 (UniProtKB/Swiss-Prot),   Q8BUK0 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001411670   ⟸   NM_001424741
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001411669   ⟸   NM_001424740
- Peptide Label: isoform 3
- UniProtKB: Q91ZE9 (UniProtKB/Swiss-Prot),   Q8BUK0 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q91ZE9-F1-model_v2 AlphaFold Q91ZE9 1-185 view protein structure

Promoters
RGD ID:6830909
Promoter ID:MM_KWN:31169
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   Brain,   Kidney,   Liver,   Lung,   MEF_B4
Transcripts:OTTMUST00000036432,   OTTMUST00000036434
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362118,370,156 - 118,371,852 (-)MPROMDB
RGD ID:6830911
Promoter ID:MM_KWN:31170
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   Liver,   Lung
Transcripts:OTTMUST00000036430,   OTTMUST00000036433,   UC008LSB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362118,372,576 - 118,374,202 (-)MPROMDB
RGD ID:6830908
Promoter ID:MM_KWN:31171
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   Brain,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000036427,   OTTMUST00000036429,   OTTMUST00000036431
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362118,374,966 - 118,375,727 (-)MPROMDB
RGD ID:6878366
Promoter ID:EPDNEW_M2598
Type:initiation region
Name:Bmf_1
Description:Mus musculus BCL2 modifying factor , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382118,549,639 - 118,549,699EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2176433 AgrOrtholog
Ensembl Genes ENSMUSG00000040093 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000090219 ENTREZGENE
  ENSMUST00000090219.13 UniProtKB/TrEMBL
  ENSMUST00000110859 ENTREZGENE
  ENSMUST00000110859.3 UniProtKB/TrEMBL
  ENSMUST00000125860 ENTREZGENE
  ENSMUST00000125860.3 UniProtKB/Swiss-Prot
InterPro BMF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:171543 UniProtKB/Swiss-Prot
MGD MGI:2176433 ENTREZGENE
NCBI Gene 171543 ENTREZGENE
PANTHER BCL-2-MODIFYING FACTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR32014 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BMF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Bmf PhenoGen
UniProt A2AV74 ENTREZGENE, UniProtKB/TrEMBL
  A2AV75 ENTREZGENE, UniProtKB/TrEMBL
  BMF_MOUSE UniProtKB/Swiss-Prot
  Q3TAQ6_MOUSE UniProtKB/TrEMBL
  Q8BUK0 ENTREZGENE
  Q91ZE9 ENTREZGENE
UniProt Secondary Q8BUK0 UniProtKB/Swiss-Prot