Plod3 (procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3)

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Gene: Plod3 (procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3) Mus musculus

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Symbol:

Plod3

Name:

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3

RGD ID:

1553789

MGI Page

MGI

Description:

Enables procollagen glucosyltransferase activity and procollagen-lysine 5-dioxygenase activity. Involved in hydroxylysine biosynthetic process. Acts upstream of or within several processes, including chordate embryonic development; endothelial cell morphogenesis; and extracellular matrix organization. Located in several cellular components, including endoplasmic reticulum; extracellular space; and trans-Golgi network. Is expressed in several structures, including branchial arch; ear; future brain; incisor; and skeleton. Orthologous to human PLOD3 (procollagen-lysine,2-oxoglutarate 5-dioxygenase 3).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

AI414586; LH; LH3; lysyl hydroxylase 2; lysyl hydroxylase 3; multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3; procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	137,015,873 - 137,025,500 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	137,015,873 - 137,025,502 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	136,987,019 - 136,996,646 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	136,987,019 - 136,996,648 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	137,462,889 - 137,472,516 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	137,271,649 - 137,281,166 (+)	NCBI		MGSCv36	mm8
Celera	5	134,003,006 - 134,012,645 (+)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	76.09	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bone Fragility with Contractures, Arterial Rupture, and Deafness (ISO)

Cerebral Hemorrhage (ISO)

genetic disease (ISO)

hepatocellular carcinoma (IMP,ISO)

hypothyroidism (ISO)

Plasminogen Activator Inhibitor-1 Deficiency (ISO)

pleomorphic xanthoastrocytoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

(S)-nicotine (EXP)

1,10-phenanthroline (ISO)

1,2-dichloroethane (EXP)

1,2-dimethylhydrazine (EXP)

1,4-dithiothreitol (ISO)

17alpha-ethynylestradiol (EXP)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,6-tribromophenol (ISO)

2,6-dinitrotoluene (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

3,4-methylenedioxymethamphetamine (EXP)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (EXP,ISO)

4-hydroxyphenyl retinamide (EXP)

aconitine (ISO)

acrylamide (ISO)

allethrin (ISO)

ammonium chloride (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (EXP)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (ISO)

carbon nanotube (EXP)

chlorogenic acid (ISO)

chlorpyrifos (EXP)

choline (EXP)

clobetasol (EXP)

clofibrate (EXP)

Cuprizon (ISO)

cyclophosphamide (ISO)

cyclosporin A (ISO)

cyhalothrin (ISO)

cypermethrin (ISO)

decabromodiphenyl ether (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

ethanol (EXP)

fenthion (EXP)

fenvalerate (ISO)

folic acid (EXP)

fulvestrant (ISO)

genistein (ISO)

ivermectin (ISO)

kainic acid (EXP)

L-1,4-dithiothreitol (ISO)

L-methionine (EXP)

miconazole (EXP)

N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal (ISO)

N-nitrosodiethylamine (EXP)

nicotine (EXP)

Osajin (ISO)

paracetamol (EXP,ISO)

piperonyl butoxide (EXP)

Pomiferin (ISO)

potassium chromate (ISO)

puerarin (ISO)

pyrethrins (ISO)

quercetin (EXP)

resveratrol (ISO)

Rosavin (ISO)

rotenone (ISO)

simvastatin (ISO)

Soman (ISO)

thapsigargin (ISO)

trichostatin A (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

basement membrane assembly (IMP)

cellular response to hormone stimulus (ISO)

collagen fibril organization (IMP)

collagen metabolic process (IMP)

endothelial cell morphogenesis (IMP)

epidermis morphogenesis (IMP)

hydroxylysine biosynthetic process (IDA)

in utero embryonic development (IMP)

lung morphogenesis (IMP)

neural tube development (IMP)

peptidyl-lysine hydroxylation (IBA,IDA,IMP,ISO)

protein localization (IMP)

protein O-linked glycosylation (ISO)

vasodilation (IMP)

Cellular Component

collagen-containing extracellular matrix (HDA,IDA)

endoplasmic reticulum (IBA,IDA,ISO)

extracellular region (IEA)

extracellular space (IDA)

Golgi apparatus (ISO)

membrane (IEA)

trans-Golgi network (IDA)

Molecular Function

catalytic activity (IEA)

dioxygenase activity (IEA)

glycosyltransferase activity (IEA)

iron ion binding (ISO)

L-ascorbic acid binding (IEA)

metal ion binding (ISO)

oxidoreductase activity (IEA)

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (IEA)

procollagen galactosyltransferase activity (ISO)

procollagen glucosyltransferase activity (IBA,IDA,ISO)

procollagen-lysine 5-dioxygenase activity (IBA,IDA,ISO)

protein binding (ISO)

small molecule binding (ISO)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

lysine degradation pathway (IEA)

O-linked glycan biosynthetic pathway (IEA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal auditory brainstem response (IEA)

abnormal cutaneous collagen fibril morphology (IAGP)

abnormal embryo size (IEA)

abnormal epidermal layer morphology (IAGP)

abnormal eye morphology (IAGP)

abnormal intracellular organelle morphology (IAGP)

abnormal lung morphology (IAGP)

abnormal neural tube morphology (IAGP)

abnormal pericardium morphology (IEA)

abnormal preimplantation embryo development (IAGP)

abnormal Reichert's membrane morphology (IAGP)

abnormal skeleton morphology (IAGP)

abnormal urinary bladder morphology (IEA)

abnormal vascular endothelial cell morphology (IAGP)

blistering (IAGP)

cleft palate (IAGP)

decreased embryo size (IAGP)

embryonic growth retardation (IAGP)

embryonic lethality during organogenesis, complete penetrance (IAGP)

embryonic lethality during organogenesis, incomplete penetrance (IAGP)

embryonic lethality prior to tooth bud stage (IEA)

exencephaly (IAGP)

impaired basement membrane formation (IAGP)

increased vasodilation (IAGP)

intracranial hemorrhage (IAGP)

neonatal lethality, complete penetrance (IAGP)

prenatal lethality, incomplete penetrance (IAGP)

preweaning lethality, complete penetrance (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	MGD IEA	MGD IEA
4.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
6.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
7.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
8.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
10.	Differential expression of procollagen lysine 2-oxoglutarate 5-deoxygenase and matrix metalloproteinase isoforms in hypothyroid rat ovary and disintegration of extracellular matrix.	Saha SK, etal., Endocrinology. 2005 Jul;146(7):2963-75. Epub 2005 Apr 7.
11.	Barrier to autointegration factor 1, procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3, and splicing factor 3b subunit 4 as early-stage cancer decision markers and drivers of hepatocellular carcinoma.	Shen Q, etal., Hepatology. 2018 Apr;67(4):1360-1377. doi: 10.1002/hep.29606. Epub 2018 Feb 20.

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10429951	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11130984	PMID:11334715	PMID:11896059	PMID:12477932	PMID:12904583	PMID:14610273
PMID:14681479	PMID:15377789	PMID:15489334	PMID:15782199	PMID:16141072	PMID:16141073	PMID:16447251	PMID:16467571	PMID:16996725	PMID:17873278	PMID:19696018	PMID:19713213
PMID:21220425	PMID:21267068	PMID:21677750	PMID:21873635	PMID:22159717	PMID:22573318	PMID:23209641	PMID:24457600	PMID:25419660	PMID:27435297	PMID:27466183	PMID:28071719
PMID:29208648	PMID:30409884	PMID:30457570	PMID:30516406	PMID:30550785	PMID:31162944	PMID:32325033	PMID:36114006	PMID:36920550	PMID:38355793

Genomics

Comparative Map Data

Plod3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	137,015,873 - 137,025,500 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	137,015,873 - 137,025,502 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	136,987,019 - 136,996,646 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	136,987,019 - 136,996,648 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	137,462,889 - 137,472,516 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	137,271,649 - 137,281,166 (+)	NCBI		MGSCv36	mm8
Celera	5	134,003,006 - 134,012,645 (+)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	76.09	NCBI

PLOD3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	101,205,984 - 101,217,581 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	101,205,977 - 101,218,420 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	100,849,265 - 100,860,862 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	100,635,978 - 100,647,731 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	100,442,700 - 100,454,303	NCBI
Celera	7	95,858,417 - 95,870,169 (-)	NCBI		Celera
Cytogenetic Map	7	q22.1	NCBI
HuRef	7	95,442,117 - 95,454,228 (-)	NCBI		HuRef
CHM1_1	7	100,779,662 - 100,791,414 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	102,529,447 - 102,541,882 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	100,207,645 - 100,219,398 (-)	NCBI

Plod3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	25,313,070 - 25,323,631 (-)	NCBI		GRCr8
mRatBN7.2	12	19,676,384 - 19,686,945 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	19,676,386 - 19,686,960 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	20,814,848 - 20,825,421 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	21,427,553 - 21,438,126 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	20,492,753 - 20,503,314 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	22,716,421 - 22,726,982 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	22,716,423 - 22,726,982 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	24,728,205 - 24,738,766 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	20,856,527 - 20,867,088 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	20,846,399 - 20,856,690 (+)	NCBI
Celera	12	21,452,299 - 21,462,860 (-)	NCBI		Celera
Cytogenetic Map	12	q12	NCBI

Plod3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955456	16,082,437 - 16,093,389 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955456	16,082,424 - 16,090,773 (+)	NCBI	ChiLan1.0	ChiLan1.0

PLOD3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	119,219,216 - 119,230,857 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	167,483,838 - 167,495,393 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	93,347,335 - 93,358,921 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	106,587,858 - 106,599,605 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	106,587,858 - 106,599,605 (-)	Ensembl	panpan1.1		panPan2

PLOD3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	8,664,135 - 8,671,637 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	8,664,358 - 8,671,620 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	10,361,502 - 10,368,957 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	8,483,656 - 8,491,120 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	8,483,333 - 8,491,117 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	8,443,884 - 8,451,311 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	8,414,481 - 8,421,939 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	8,579,093 - 8,586,540 (+)	NCBI		UU_Cfam_GSD_1.0

Plod3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	132,939,235 - 132,946,261 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936543	1,090,253 - 1,097,301 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936543	1,090,268 - 1,097,170 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PLOD3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	8,911,791 - 8,919,516 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	8,911,787 - 8,919,525 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

PLOD3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	11,962,394 - 11,974,206 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	28	11,962,286 - 11,975,228 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666070	4,378,287 - 4,390,520 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Plod3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	16,074,141 - 16,082,223 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	16,074,027 - 16,082,139 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Plod3
416 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	861
Count of miRNA genes:	492
Interacting mature miRNAs:	553
Transcripts:	ENSMUST00000004968, ENSMUST00000127100, ENSMUST00000129896, ENSMUST00000137419, ENSMUST00000144784, ENSMUST00000151642
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
27226719	Tibw6_m	tibia width 6, proximal, 16 week (mouse)					5	72857343	139985755	Mouse
1301715	Elmaz2_m	elevated maze behavior 2 (mouse)			Not determined		5	125178229	141700466	Mouse
10412191	Bbaa24_m	B.burgdorferi-associated arthritis 24 (mouse)			Not determined		5	119945037	141700466	Mouse
13464143	Bbaa2b_m	B.burgdorferi-associated arthritis 2b (mouse)					5	133052969	140709801	Mouse
11528552	Scram1_m	spinal cord resistance to astrocytoma modifier 1 (mouse)					5	121455402	151758149	Mouse
1300827	Cora1_m	correlation in cytokine production 1 (mouse)			Not determined		5	115156883	149157015	Mouse
10412239	Alpq7_m	alcohol preference QTL 7 (mouse)			Not determined		5	104705939	138705939	Mouse
12880406	Jcdq2_m	joint cartilage degeneration QTL 2 (mouse)					5	129787831	151758149	Mouse
4141218	Ath24_m	atherosclerosis 24 (mouse)			Not determined			129520084	151758149	Mouse
1301363	Pbwg13_m	postnatal body weight growth 13 (mouse)			Not determined		5	125133457	151758149	Mouse
1301362	Prnr1_m	prion resistance 1 (mouse)			Not determined		5	89418876	146787935	Mouse
1300913	Bwefm_m	body weight females and males day 10 (mouse)			Not determined		5	109439348	143439459	Mouse
4141081	Nidd7k_m	Nidd7 on KK-A (mouse)			Not determined			119945037	149347326	Mouse
10043890	Trigq4_m	triglyceride QTL 4 (mouse)			Not determined		5	107906299	141906412	Mouse
1302079	Lbw3_m	lupus NZB x NZW 3 (mouse)			Not determined		5	124700335	151758149	Mouse
1301986	Bpq4_m	blood pressure QTL 4 (mouse)			Not determined		5	121555236	151758149	Mouse
1301857	Bglq14_m	body growth late QTL 14 (mouse)			Not determined		5	118948964	151758149	Mouse
10412202	Bbaa26_m	B.burgdorferi-associated arthritis 26 (mouse)			Not determined		5	104583688	138555455	Mouse
1301543	Hypch_m	hypercholesterolemia (mouse)			Not determined		5	109238624	139118905	Mouse
4142473	Chlq11_m	circulating hormone level QTL 11 (mouse)			Not determined		5	107906299	141906412	Mouse
13464251	Ahl21_m	age related hearing loss, early onset 21 (mouse)					5	109167240	143167381	Mouse
11341716	Rvfs3_m	Rift Valley fever susceptibility 3 (mouse)					5	26441234	138455402	Mouse
1301226	Bbaa2_m	B.burgdorferi-associated arthritis 2 (mouse)			Not determined		5	115156883	149157015	Mouse
10412197	Bbaa25_m	B.burgdorferi-associated arthritis 25 (mouse)			Not determined		5	109167240	143167381	Mouse
1301102	Cia14_m	collagen induced arthritis 14 (mouse)			Not determined		5	113320385	138555455	Mouse
11049557	Lmr26_m	leishmaniasis resistance 26 (mouse)					5	133925558	151758149	Mouse
13464243	Ahl20_m	age related hearing loss, early onset 20 (mouse)					5	107906299	141906412	Mouse

Markers in Region

AI414586

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	136,996,352 - 136,996,476	UniSTS	GRCm38
MGSCv37	5	137,472,222 - 137,472,346	UniSTS	GRCm37
Celera	5	134,012,351 - 134,012,475	UniSTS
Cytogenetic Map	5	G2	UniSTS
cM Map	5	80.0	UniSTS
Whitehead/MRC_RH	5	1649.31	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_011962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC147987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF046783	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK013195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK033360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK053320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK088948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK157741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK178931	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK180845	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK183180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK183516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK185389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK186785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK191469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK192746	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK193849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK194341	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK197520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK198820	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK199802	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK200122	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK201573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK204070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK205094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK206428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK206950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK207731	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK209058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK210020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK215272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK215677	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK217108	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK217183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK219112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK220112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY014830	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BB692664	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC043047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC054734	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000004968 ⟹ ENSMUSP00000004968

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,015,873 - 137,025,502 (+)	Ensembl
GRCm38.p6 Ensembl	5	136,987,019 - 136,996,648 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000127100 ⟹ ENSMUSP00000123550

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,020,478 - 137,024,031 (+)	Ensembl
GRCm38.p6 Ensembl	5	136,991,624 - 136,995,177 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000129896

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,016,232 - 137,020,942 (+)	Ensembl
GRCm38.p6 Ensembl	5	136,987,378 - 136,992,088 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000137419

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,019,356 - 137,020,942 (+)	Ensembl
GRCm38.p6 Ensembl	5	136,990,502 - 136,992,088 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000144784

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,016,330 - 137,021,559 (+)	Ensembl
GRCm38.p6 Ensembl	5	136,987,476 - 136,992,705 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000151642

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,019,160 - 137,023,033 (+)	Ensembl
GRCm38.p6 Ensembl	5	136,990,306 - 136,994,179 (+)	Ensembl

RefSeq Acc Id:

NM_011962 ⟹ NP_036092

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	137,015,873 - 137,025,500 (+)	NCBI
GRCm38	5	136,987,019 - 136,996,646 (+)	ENTREZGENE
MGSCv37	5	137,462,889 - 137,472,516 (+)	RGD
Celera	5	134,003,006 - 134,012,645 (+)	RGD
cM Map	5		ENTREZGENE

Sequence:

show sequence

GGGCAAACCTAATTCCGGTCGCATTGTGGTTACCCAAAAAAAAAAATCTGAGAGCCGCCTGCAA
ATGGTCACTTTTTAAAAACTGGCGTGGGTGGTCTTTAGGGGAGCGCTCTTGTCCCTGTGCCCTT
TGCATCCCCGGTGCGTGTCCCCGCGCTGCGGGACAGGATAGGCAGGTTCGGTGGCTTTGTTGAA
CCCAGACCCACGAGGATGTCCGCGCGATCCCGCCTCCGGCTTCCCGGCCCCTCCGGGCCCGTCG
CCCCCGCCGCGCGCCACCCCAGGCCTTGCTGTCCTGTGTTCCTCCGGGTCAGACTTGTGGTCAA
GACCCGCCCCCGCGTCGCCTGGACCCTCCTCAAAAGGTCACTTCCCCTCCCGGGGGGATTCGGT
TGCTCCGGTGTGAGTCAGGCAGTGCCCAGGACCGGACCCTCGGCTCCTCCCCACCCTCCAGCCC
GCGCCCGCGGGACAATCCTTGCCTTGTCTCGCCGTCTGCATCTCGGGTTTTCGGTGGCCTCGGG
TTACGCCTTTTTTCCAGGGCGGAGTCCCGAGCACAGCTCCTCCTCTCAGCGGGCTCGGTTTCCC
CTTTTCCCAGAATCTTCCCGGGGCGTCGGAATCCAGGCGCTCAGCTCAGCGCCGGTGCGGGCCT
GGGTGTAGCCTAAGCGTGCTGCTAGCCATGGCTGCGGCAGGCCCGGAACCCCGGCTTTTGCTCC
TGCTCCTGCTGCTGCTGCCGCCGCTGCCCCCCGTAACTTCTGCCTCCGATCGACCCCGGGGCGC
CAATGCTGTCAACCCAGACAAATTGCTGGTGATCACTGTGGCTACGGCAGAGACAGAGGGGTAC
CGGCGTTTTCTGCAGTCTGCGGAGTTCTTTAACTACACTGTACGGACCCTGGGCCTGGGACAGG
AGTGGCGAGGGGGTGATGTGGCTCGAACAGTTGGTGGAGGCCAGAAGGTCAGGTGGCTCAAGAA
GGAAATGGAGAAATATGCAGATCAGAAAGACATGATCATCATGTTTGTGGACAGCTACGACGTG
ATTCTGGCAAGCAGCCCGACAGAGCTGCTGAAGAAGTTTGTTCAGAGTGGCAGTCATCTGCTGT
TCTCTGCTGAGAGCTTCTGCTGGCCTGAGTGGGGGCTGGCAGAGCAGTACCCTGAGGTGGGCAT
GGGGAAGCGCTTCCTCAACTCTGGTGGATTCATCGGCTTTGCTCCCACCATCCATCAGATTGTC
CGCCAGTGGAACTACAAAGACGACGATGATGATCAATTGTTCTACACTCAACTGTACCTGGACC
CAGGGCTGCGGGAGAAACTCAAACTGAGTCTGGACCATAAATCCCGGATCTTTCAGAACCTCAA
TGGAGCCTTAGATGAAGTGATCTTAAAGTTTGACCAGAATCGTGTGCGCATCCGGAATGTGGCC
TACGACACACTTCCTGTTGTGGTCCATGGAAATGGTCCCACTAAGCTCCAGCTCAACTACCTGG
GGAACTATGTCCCCAATGGCTGGACTCCCCAGGGAGGCTGTGGATTCTGCAACCAGACCCTGAG
GACACTCCCGGGGGGGCAGCCTCCCCCCCGGGTGCTTCTGGCCGTGTTTGTGGAGCAGCCTACT
CCCTTCCTGCCTCGGTTCCTGCAGCGCCTACTGCTCCTGGATTACCCCCCGGACAGGATCTCTC
TCTTCCTTCACAACAGCGAGGTGTACCACGAGCCTCATATTGCAGATGCCTGGCCACAGCTCCA
GGACCATTTTTCAGCTGTAAAGCTGGTGGGGCCAGAGGAGGCCCTGAGCGCAGGGGAGGCCAGG
GACATGGCCATGGACAGCTGTCGGCAGAACCCTGAGTGTGAGTTCTACTTTAGCCTGGATGCTG
ATGCCGTCCTTACGAACCCGGAGACCTTGCGTGTCTTGATTGAACAAAACAGGAAGGTAATAGC
TCCCATGCTTTCCCGCCATGGCAAGCTCTGGTCCAACTTCTGGGGTGCCCTGAGCCCCAATGAG
TACTACGCCCGCTCCGAAGACTACGTGGAACTGGTGCAGCGGAAGCGAGTGGGCGTGTGGAATG
TACCCTACATATCTCAGGCATATGTGATCCGCGGGGAGACCCTGAGGACTGAACTGCCCCAAAA
GGAGGTATTCTCCAGCAGCGACACAGACCCAGATATGGCTTTCTGCAAGAGCGTCCGGGACAAG
GGCATCTTCCTCCACCTCAGCAACCAGCACGAGTTTGGCCGGCTGCTGGCTACTTCTCGCTATG
ACACAGACCACCTACACCCAGACCTCTGGCAGATCTTTGACAACCCTGTGGACTGGAGAGAACA
GTACATTCACGAGAATTACAGCCGGGCCCTGGATGGGGAAGGGCTAGTGGAACAGCCATGCCCA
GATGTGTACTGGTTCCCACTGCTGACCGAGCAGATGTGTGATGAGCTGGTGGAGGAAATGGAAC
ACTATGGCCAGTGGTCTGGAGGCCGGCACGAGGATTCCAGGTTGGCTGGAGGATACGAGAATGT
TCCCACCGTTGATATCCACATGAAACAGGTGGGATACGAGGACCAGTGGCTTCAGCTGCTGCGG
ACATATGTGGGGCCCATGACGGAGTACCTGTTCCCTGGCTACCACACCAAGACACGGGCAGTGA
TGAACTTCGTGGTCCGCTACCGGCCAGATGAGCAGCCCTCGCTTCGGCCACACCATGACTCGTC
CACCTTCACTCTCAATGTCGCCCTCAACCACAAGGGTGTAGATTATGAGGGAGGCGGCTGCCGC
TTCCTGCGTTACGACTGCAGAATCTCCTCTCCGAGGAAAGGCTGGGCCCTCCTGCACCCTGGCC
GCCTCACACACTACCATGAGGGGCTGCCCACCACCCGGGGTACTCGATACATCATGGTGTCCTT
TGTTGACCCCTGACACTCAACCAGTCTGCCAAACCTTCTCTGCCACTGTGCCTTGTTGGACAAC
CTGGGTCGCCATTCTCAGAGAGAGGGGACGCTGCCCGTCTCATCTCCCGAGAGTGTCTGTGTGC
CTGGGATGGAATGTGCTGGTCCCAACAGTCCTCAGGAGGTCCCTGGAGTCTTCCACTTGCCCAC
TGACCCCATGGACTCAGGGAAAGTGGACTTCTGAGGGTCCCCTGCCTGATAAATTATTAAGCTT
CCTCAGCCTCACTTTCAATAAAAGGATGTTTGTAACCATTGAGTCCGTGAGTCCAATATAAAGA
CAGGGTCTCATGTGTCCCATGCTGGCCTCCCACCATGCACAAATACACATGATTAAAATTTTTT
TTTAAAATCTGCAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_036092	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD54618	(Get FASTA)	NCBI Sequence Viewer
	AAH43047	(Get FASTA)	NCBI Sequence Viewer
	AAH54734	(Get FASTA)	NCBI Sequence Viewer
	AAK00576	(Get FASTA)	NCBI Sequence Viewer
	BAB28704	(Get FASTA)	NCBI Sequence Viewer
	BAC28246	(Get FASTA)	NCBI Sequence Viewer
	BAC40669	(Get FASTA)	NCBI Sequence Viewer
	EDL19291	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000004968
	ENSMUSP00000004968.5
	ENSMUSP00000123550.2
GenBank Protein	Q9R0E1	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_036092 ⟸ NM_011962
- Peptide Label:	precursor
- UniProtKB:	Q542E0 (UniProtKB/Swiss-Prot), Q9CYY9 (UniProtKB/Swiss-Prot), Q9R0E1 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAAAGPEPRLLLLLLLLLPPLPPVTSASDRPRGANAVNPDKLLVITVATAETEGYRRFLQSAEF FNYTVRTLGLGQEWRGGDVARTVGGGQKVRWLKKEMEKYADQKDMIIMFVDSYDVILASSPTEL LKKFVQSGSHLLFSAESFCWPEWGLAEQYPEVGMGKRFLNSGGFIGFAPTIHQIVRQWNYKDDD DDQLFYTQLYLDPGLREKLKLSLDHKSRIFQNLNGALDEVILKFDQNRVRIRNVAYDTLPVVVH GNGPTKLQLNYLGNYVPNGWTPQGGCGFCNQTLRTLPGGQPPPRVLLAVFVEQPTPFLPRFLQR LLLLDYPPDRISLFLHNSEVYHEPHIADAWPQLQDHFSAVKLVGPEEALSAGEARDMAMDSCRQ NPECEFYFSLDADAVLTNPETLRVLIEQNRKVIAPMLSRHGKLWSNFWGALSPNEYYARSEDYV ELVQRKRVGVWNVPYISQAYVIRGETLRTELPQKEVFSSSDTDPDMAFCKSVRDKGIFLHLSNQ HEFGRLLATSRYDTDHLHPDLWQIFDNPVDWREQYIHENYSRALDGEGLVEQPCPDVYWFPLLT EQMCDELVEEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTEY LFPGYHTKTRAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKGVDYEGGGCRFLRYDCRIS SPRKGWALLHPGRLTHYHEGLPTTRGTRYIMVSFVDP hide sequence

Ensembl Acc Id:

ENSMUSP00000123550 ⟸ ENSMUST00000127100

Ensembl Acc Id:

ENSMUSP00000004968 ⟸ ENSMUST00000004968

Protein Domains

Fe2OG dioxygenase Prolyl 4-hydroxylase alpha subunit

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9R0E1-F1-model_v2	AlphaFold	Q9R0E1	1-741	view protein structure

Promoters

RGD ID:

6888406

Promoter ID:

EPDNEW_M7648

Type:

multiple initiation site

Name:

Plod3_2

Description:

Mus musculus procollagen-lysine, 2-oxoglutarate 5-dioxygenase3 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M7650

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	136,986,990 - 136,987,050	EPDNEW

RGD ID:

6888398

Promoter ID:

EPDNEW_M7650

Type:

initiation region

Name:

Plod3_1

Description:

Mus musculus procollagen-lysine, 2-oxoglutarate 5-dioxygenase3 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M7648

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	136,987,603 - 136,987,663	EPDNEW

RGD ID:

6838059

Promoter ID:

MM_KWN:44438

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, BoneMarrow_0Hour, BoneMarrow_4Hour, ES_Cell, MEF_B6

Transcripts:

OTTMUST00000056808, OTTMUST00000056810, UC009ABJ.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	137,462,601 - 137,463,362 (+)	MPROMDB

RGD ID:

6838058

Promoter ID:

MM_KWN:44439

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_2Hour, BoneMarrow_4Hour, Lung

Transcripts:

OTTMUST00000056811, OTTMUST00000056812

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	137,465,854 - 137,466,354 (+)	MPROMDB

RGD ID:

6838093

Promoter ID:

MM_KWN:44440

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_2Hour, BoneMarrow_4Hour, Brain

Transcripts:

NR_030483, OTTMUST00000056813

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	137,466,901 - 137,467,462 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1347008	AgrOrtholog
Ensembl Genes	ENSMUSG00000004846	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000004968	ENTREZGENE
	ENSMUST00000004968.11	UniProtKB/Swiss-Prot
	ENSMUST00000127100.2	UniProtKB/TrEMBL
Gene3D-CATH	q2cbj1_9rhob like domain	UniProtKB/Swiss-Prot
InterPro	Collagen_mod_GT25	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	IPNS-like_FE2OG_OXY	UniProtKB/Swiss-Prot
	Nucleotide-diphossugar_trans	UniProtKB/Swiss-Prot
	Oxoglu/Fe-dep_dioxygenase	UniProtKB/Swiss-Prot
	Pro_4_hyd_alph	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Procol_lys_dOase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:26433	UniProtKB/Swiss-Prot
MGD	MGI:1347008	ENTREZGENE
NCBI Gene	26433	ENTREZGENE
PANTHER	MULTIFUNCTIONAL PROCOLLAGEN LYSINE HYDROXYLASE AND GLYCOSYLTRANSFERASE LH3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	2OG-FeII_Oxy	UniProtKB/Swiss-Prot
PhenoGen	Plod3	PhenoGen
PROSITE	FE2OG_OXY	UniProtKB/Swiss-Prot
	LYS_HYDROXYLASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	P4Hc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF53448	UniProtKB/Swiss-Prot
UniProt	F6W3Q8_MOUSE	UniProtKB/TrEMBL
	PLOD3_MOUSE	UniProtKB/Swiss-Prot
	Q542E0	ENTREZGENE
	Q9CYY9	ENTREZGENE
	Q9R0E1	ENTREZGENE
UniProt Secondary	Q542E0	UniProtKB/Swiss-Prot
	Q9CYY9	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)

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