Gda (guanine deaminase) - Rat Genome Database

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Gene: Gda (guanine deaminase) Mus musculus
Analyze
Symbol: Gda
Name: guanine deaminase
RGD ID: 1553769
MGI Page MGI
Description: Enables guanine deaminase activity. Involved in allantoin metabolic process; amide catabolic process; and purine-containing compound catabolic process. Is active in cytosol. Is expressed in several structures, including adrenal gland; brain; and peripheral nervous system ganglion. Orthologous to human GDA (guanine deaminase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AU015411; AW047581; GAH; guanase; guanine aminase; guanine aminohydrolase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391921,368,671 - 21,450,025 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1921,368,671 - 21,450,809 (-)EnsemblGRCm39 Ensembl
GRCm381921,391,307 - 21,472,661 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1921,391,307 - 21,473,445 (-)EnsemblGRCm38mm10GRCm38
MGSCv371921,465,797 - 21,547,151 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361921,458,404 - 21,539,758 (-)NCBIMGSCv36mm8
Celera1922,118,313 - 22,200,564 (-)NCBICelera
Cytogenetic Map19BNCBI
cM Map1914.32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (EXP)
1,2,4-trimethylbenzene  (ISO)
1-bromopropane  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
17beta-estradiol 3-benzoate  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-trinitrobenzenesulfonic acid  (EXP)
2-hydroxypropanoic acid  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',4,4'-tetrachlorobiphenyl  (EXP)
3,4-methylenedioxymethamphetamine  (ISO)
3-chloropropane-1,2-diol  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (ISO)
aflatoxin B1  (ISO)
ammonium chloride  (ISO)
arsenous acid  (ISO)
benzatropine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
benzo[e]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bleomycin A2  (ISO)
C60 fullerene  (ISO)
carbon nanotube  (EXP)
cefaloridine  (ISO)
CGP 52608  (ISO)
chlordecone  (EXP)
chlorpyrifos  (EXP,ISO)
chromium(6+)  (EXP)
chrysene  (EXP)
Cuprizon  (ISO)
curcumin  (EXP)
cyclosporin A  (ISO)
diarsenic trioxide  (ISO)
diuron  (ISO)
endosulfan  (ISO)
ethanol  (EXP)
flavonoids  (ISO)
flutamide  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
haloperidol  (ISO)
hydroquinone  (ISO)
isoprenaline  (EXP)
ivermectin  (ISO)
lipopolysaccharide  (ISO)
lithium chloride  (ISO)
methamphetamine  (ISO)
methapyrilene  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosomorpholine  (ISO)
nefazodone  (ISO)
nimesulide  (ISO)
nitrofen  (ISO)
ozone  (EXP)
p-toluidine  (ISO)
paracetamol  (ISO)
perfluorononanoic acid  (ISO)
phenobarbital  (EXP,ISO)
PhIP  (ISO)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
progesterone  (ISO)
propiconazole  (EXP)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
streptozocin  (ISO)
succimer  (EXP)
testosterone  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
tributylstannane  (EXP,ISO)
trichloroethene  (ISO)
triphenyl phosphate  (ISO)
tungsten  (EXP)
urethane  (ISO)
valdecoxib  (ISO)
valproic acid  (ISO)
vancomycin  (EXP)
venlafaxine hydrochloride  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (IBA,IDA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Adenosine deaminase, 5'-nucleotidase, guanase and cytidine deaminase activities in gastric tissues from patients with gastric cancer. Durak I, etal., Cancer Lett. 1994 Sep 15;84(2):199-202. doi: 10.1016/0304-3835(94)90376-x.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:6375655   PMID:8064675   PMID:8226898   PMID:8889548   PMID:10075721   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11962625   PMID:12477932  
PMID:14681479   PMID:15368895   PMID:16141072   PMID:16141073   PMID:18077674   PMID:19022416   PMID:19138174   PMID:19455133   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22794259  
PMID:24952961   PMID:27113764   PMID:27160897   PMID:27507650   PMID:28671696   PMID:28706196   PMID:30562941   PMID:31146259   PMID:32325033   PMID:33288908  


Genomics

Comparative Map Data
Gda
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391921,368,671 - 21,450,025 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1921,368,671 - 21,450,809 (-)EnsemblGRCm39 Ensembl
GRCm381921,391,307 - 21,472,661 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1921,391,307 - 21,473,445 (-)EnsemblGRCm38mm10GRCm38
MGSCv371921,465,797 - 21,547,151 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361921,458,404 - 21,539,758 (-)NCBIMGSCv36mm8
Celera1922,118,313 - 22,200,564 (-)NCBICelera
Cytogenetic Map19BNCBI
cM Map1914.32NCBI
GDA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38972,114,608 - 72,259,869 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl972,114,595 - 72,257,193 (+)EnsemblGRCh38hg38GRCh38
GRCh37974,729,524 - 74,868,476 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36973,954,113 - 74,056,960 (+)NCBINCBI36Build 36hg18NCBI36
Build 34971,993,846 - 72,096,693NCBI
Celera945,336,999 - 45,439,843 (+)NCBICelera
Cytogenetic Map9q21.13NCBI
HuRef944,551,284 - 44,688,805 (+)NCBIHuRef
CHM1_1974,876,140 - 75,013,785 (+)NCBICHM1_1
T2T-CHM13v2.0984,265,431 - 84,404,368 (+)NCBIT2T-CHM13v2.0
Gda
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21218,903,045 - 218,982,360 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1218,906,815 - 218,982,416 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1227,355,381 - 227,430,867 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01234,291,943 - 234,367,437 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01227,109,969 - 227,185,465 (-)NCBIRnor_WKY
Rnor_6.01238,982,542 - 239,057,663 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1238,982,392 - 239,057,732 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01246,267,039 - 246,345,967 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41224,579,794 - 224,655,298 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11224,743,773 - 224,819,377 (-)NCBI
Celera1216,146,233 - 216,221,719 (-)NCBICelera
Cytogenetic Map1q51NCBI
Gda
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955434983,388 - 1,049,948 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955434983,388 - 1,050,413 (-)NCBIChiLan1.0ChiLan1.0
GDA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1970,891,615 - 70,994,574 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl970,891,319 - 70,994,574 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0952,559,752 - 52,662,886 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
GDA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1185,506,598 - 85,586,212 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl185,444,917 - 85,586,163 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha185,972,183 - 86,051,720 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0185,957,462 - 86,037,026 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl185,936,847 - 86,132,041 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1185,718,567 - 85,798,015 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0185,423,312 - 85,502,937 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0186,182,014 - 86,261,677 (-)NCBIUU_Cfam_GSD_1.0
Gda
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947132,890,190 - 132,981,107 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365038,192,049 - 8,278,790 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049365038,191,925 - 8,279,806 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GDA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1225,403,138 - 225,589,827 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11225,425,389 - 225,589,835 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21252,188,929 - 252,201,181 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GDA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11283,195,746 - 83,305,181 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1283,195,994 - 83,306,792 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603871,615,877 - 71,727,012 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gda
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624736836,286 - 914,409 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624736836,283 - 914,616 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1464
Count of miRNA genes:611
Interacting mature miRNAs:747
Transcripts:ENSMUST00000087600, ENSMUST00000121725, ENSMUST00000136258
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142302Nstr1_mnerve sheath tumor resistance QTL 1 (mouse)Not determined19122371338Mouse
1301271Datd_mdopamine transporter density (mouse)Not determined19132340234Mouse
4142406Pbctlp1_mperipheral blood cytotoxic T lymphocyte percentage 1 (mouse)Not determined132875174Mouse
1300904Chab5_mcholesterol absorption 5 (mouse)Not determined19165376435653927Mouse
26884385Skwq14_mskull length QTL 14, 16 week (mouse)19325000035877400Mouse
1301800Faq10_mfluctuating asymmetry QTL 10 (mouse)Not determined19332321637323348Mouse
1300923Bits4_mbitterness sensitivity 4 (mouse)Not determined19332321637323348Mouse
1302126Skull26_mskull morphology 26 (mouse)Not determined19332321637323348Mouse
1300591Pas3_mpulmonary adenoma susceptibility 3 (mouse)Not determined19332321637323348Mouse
11039522Tbbr4_mTrypanosoma brucei brucei response 4 (mouse)19531332639313470Mouse
1301228Iba4_minduction of brown adipocytes 4 (mouse)Not determined19930571543305821Mouse
1302019Pgia23_mproteoglycan induced arthritis 23 (mouse)Not determined19978745343787602Mouse
14928311Manh85_mmandible shape 85 (mouse)191191478945914789Mouse
12801464Rta2_mretinal aging 2 (mouse)141230287425302874Mouse
10413881Moe2_mmodifier of epilepsy 2 (mouse)191492301648923138Mouse
1301336Alcp23_malcohol preference locus 23 (mouse)Not determined191591260749912719Mouse
1301633Alcp24_malcohol preference locus 24 (mouse)Not determined191591260749912719Mouse
1302063Eae19_mexperimental allergic encephalomyelitis 19 (mouse)Not determined191829516252295381Mouse
1302004Lfp2_mlong free running period 2 (mouse)Not determined191829516252295381Mouse
4142343Moen2_mmodifier of engrailed QTL 2 (mouse)Not determined192023431454234461Mouse
10412251Mnp_mmodifier of Niemann Pick type C1 (mouse)Not determined192023431454234461Mouse
1301197Tlyr1_mthymic lymphoma resistance 1 (mouse)Not determined192053952825313796Mouse
4141659Pbwg20_mpostnatal body weight growth 20 (mouse)Not determined192137870555378928Mouse

Markers in Region
AU021773  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381921,396,872 - 21,397,105UniSTSGRCm38
MGSCv371921,471,362 - 21,471,595UniSTSGRCm37
Celera1922,123,892 - 22,124,125UniSTS
Cytogenetic Map19BUniSTS
cM Map1915.5UniSTS
Whitehead/MRC_RH19198.38UniSTS
UniSTS:237904  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381921,396,785 - 21,397,030UniSTSGRCm38
MGSCv371921,471,275 - 21,471,520UniSTSGRCm37
Celera1922,123,805 - 22,124,050UniSTS
Cytogenetic Map19BUniSTS
cM Map1915.5UniSTS
UniSTS:237906  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381921,392,375 - 21,392,590UniSTSGRCm38
MGSCv371921,466,865 - 21,467,080UniSTSGRCm37
Celera1922,119,381 - 22,119,596UniSTS
Cytogenetic Map19BUniSTS
cM Map1915.5UniSTS
AW047581  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381921,391,388 - 21,391,513UniSTSGRCm38
MGSCv371921,465,878 - 21,466,003UniSTSGRCm37
Celera1922,118,394 - 22,118,519UniSTS
Cytogenetic Map19BUniSTS
cM Map1915.5UniSTS
Whitehead/MRC_RH19217.21UniSTS
AU015411  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381921,393,149 - 21,393,270UniSTSGRCm38
MGSCv371921,467,639 - 21,467,760UniSTSGRCm37
Celera1922,120,167 - 22,120,288UniSTS
Cytogenetic Map19BUniSTS
cM Map1915.5UniSTS
Whitehead/MRC_RH19217.32UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_010266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006526680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC103947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC125083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF174583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF369880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF369881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF369882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF369883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF369884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC076583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY250819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000087600   ⟹   ENSMUSP00000084882
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1921,368,671 - 21,450,036 (-)Ensembl
GRCm38.p6 Ensembl1921,391,307 - 21,472,672 (-)Ensembl
RefSeq Acc Id: ENSMUST00000121725   ⟹   ENSMUSP00000112758
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1921,371,402 - 21,450,809 (-)Ensembl
GRCm38.p6 Ensembl1921,394,038 - 21,473,445 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136258
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1921,396,089 - 21,449,952 (-)Ensembl
GRCm38.p6 Ensembl1921,418,725 - 21,472,588 (-)Ensembl
RefSeq Acc Id: ENSMUST00000237823   ⟹   ENSMUSP00000157532
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1921,370,419 - 21,418,223 (-)Ensembl
GRCm38.p6 Ensembl1921,393,055 - 21,440,859 (-)Ensembl
RefSeq Acc Id: NM_010266   ⟹   NP_034396
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391921,368,671 - 21,450,025 (-)NCBI
GRCm381921,391,307 - 21,472,661 (-)ENTREZGENE
MGSCv371921,465,797 - 21,547,151 (-)RGD
Celera1922,118,313 - 22,200,564 (-)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006526680   ⟹   XP_006526743
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391921,368,694 - 21,449,958 (-)NCBI
GRCm381921,391,330 - 21,472,594 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017318064   ⟹   XP_017173553
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391921,368,694 - 21,449,763 (-)NCBI
GRCm381921,391,330 - 21,472,408 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_034396   ⟸   NM_010266
- UniProtKB: Q9R111 (UniProtKB/Swiss-Prot),   Q548F2 (UniProtKB/TrEMBL),   A0A8C6GYV9 (UniProtKB/TrEMBL),   Q71RH5 (UniProtKB/TrEMBL),   Q71RH6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006526743   ⟸   XM_006526680
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017173553   ⟸   XM_017318064
- Peptide Label: isoform X2
- UniProtKB: D3YU09 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000157532   ⟸   ENSMUST00000237823
RefSeq Acc Id: ENSMUSP00000084882   ⟸   ENSMUST00000087600
RefSeq Acc Id: ENSMUSP00000112758   ⟸   ENSMUST00000121725
Protein Domains
Amidohydrolase-related

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9R111-F1-model_v2 AlphaFold Q9R111 1-454 view protein structure

Promoters
RGD ID:13679092
Promoter ID:EPDNEW_M23695
Type:initiation region
Name:Gda_1
Description:Mus musculus guanine deaminase , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381921,472,599 - 21,472,659EPDNEW
RGD ID:6830051
Promoter ID:MM_KWN:26644
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Liver
Transcripts:OTTMUST00000070187,   UC008GYY.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361921,546,761 - 21,547,261 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:95678 AgrOrtholog
Ensembl Genes ENSMUSG00000058624 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000084882 ENTREZGENE
  ENSMUSP00000084882.4 UniProtKB/Swiss-Prot
  ENSMUSP00000112758 ENTREZGENE
  ENSMUSP00000112758.2 UniProtKB/TrEMBL
  ENSMUSP00000157532 ENTREZGENE
  ENSMUSP00000157532.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000087600 ENTREZGENE
  ENSMUST00000087600.10 UniProtKB/Swiss-Prot
  ENSMUST00000121725 ENTREZGENE
  ENSMUST00000121725.8 UniProtKB/TrEMBL
  ENSMUST00000237823 ENTREZGENE
  ENSMUST00000237823.2 UniProtKB/TrEMBL
Gene3D-CATH 2.30.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Metal-dependent hydrolases UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Amidohydro-rel UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Guanine_deaminase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Metal-dep_hydrolase_composite UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Metal_Hydrolase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:14544 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:95678 ENTREZGENE
NCBI Gene 14544 ENTREZGENE
PANTHER GUANINE DEAMINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11271:SF6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Amidohydro_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gda PhenoGen
Superfamily-SCOP SSF51338 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF51556 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs guan_deamin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A494B982_MOUSE UniProtKB/TrEMBL
  A0A8C6GYV9 ENTREZGENE
  D3YU09 ENTREZGENE, UniProtKB/TrEMBL
  GUAD_MOUSE UniProtKB/Swiss-Prot
  Q3U0C4_MOUSE UniProtKB/TrEMBL
  Q548F2 ENTREZGENE, UniProtKB/TrEMBL
  Q69ZN0_MOUSE UniProtKB/TrEMBL
  Q6DFY1_MOUSE UniProtKB/TrEMBL
  Q71RH5 ENTREZGENE
  Q71RH6 ENTREZGENE
  Q9R111 ENTREZGENE