Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Zfp668 | Mouse | Ependymomas | | ISO | ZNF668 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:26075792 | |
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Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Zfp668 | Mouse | Ependymomas | | ISO | ZNF668 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:26075792 | |
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# | Reference Title | Reference Citation |
1. | Mouse brain organization revealed through direct genome-scale TF expression analysis. | Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7. |
2. | MGDs mouse GO annotations | MGD data from the GO Consortium |
3. | Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. | Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73. |
4. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:8889548 | PMID:10349636 | PMID:11042159 | PMID:11076861 | PMID:11217851 | PMID:12477932 | PMID:12520002 | PMID:14610273 | PMID:15489334 | PMID:15539151 | PMID:15782199 | PMID:16141072 |
PMID:16141073 | PMID:17967808 | PMID:18287559 | PMID:18799693 | PMID:20059953 | PMID:20412781 | PMID:21267068 | PMID:21677750 | PMID:21873635 |
Zfp668 (Mus musculus - house mouse) |
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ZNF668 (Homo sapiens - human) |
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Zfp668 (Rattus norvegicus - Norway rat) |
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Znf668 (Chinchilla lanigera - long-tailed chinchilla) |
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ZNF668 (Pan paniscus - bonobo/pygmy chimpanzee) |
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ZNF668 (Canis lupus familiaris - dog) |
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Znf668 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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ZNF668 (Sus scrofa - pig) |
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ZNF668 (Chlorocebus sabaeus - green monkey) |
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Znf668 (Heterocephalus glaber - naked mole-rat) |
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Variants in Zfp668
402 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RefSeq Transcripts | NM_001362189 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001362190 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001362191 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001362192 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_146259 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006507848 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006507850 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006507851 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017322254 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017322256 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_030242589 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_036153123 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_036153124 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC149222 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AK028847 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK047593 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK053438 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK080005 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK081436 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK142920 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK152456 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK166367 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK169556 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK208730 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK216168 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BB612340 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC028251 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC030314 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH466531 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSMUST00000054415 ⟹ ENSMUSP00000056105 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSMUST00000106261 ⟹ ENSMUSP00000101868 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSMUST00000106262 ⟹ ENSMUSP00000101869 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSMUST00000106263 ⟹ ENSMUSP00000101870 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSMUST00000144721 ⟹ ENSMUSP00000116730 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSMUST00000150961 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001362189 ⟹ NP_001349118 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001362190 ⟹ NP_001349119 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001362191 ⟹ NP_001349120 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001362192 ⟹ NP_001349121 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_146259 ⟹ NP_666371 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006507848 ⟹ XP_006507911 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006507850 ⟹ XP_006507913 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006507851 ⟹ XP_006507914 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017322254 ⟹ XP_017177743 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017322256 ⟹ XP_017177745 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_030242589 ⟹ XP_030098449 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_036153123 ⟹ XP_036009016 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_036153124 ⟹ XP_036009017 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_001349118 | (Get FASTA) | NCBI Sequence Viewer |
NP_001349119 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001349120 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001349121 | (Get FASTA) | NCBI Sequence Viewer | |
NP_666371 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006507911 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006507913 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006507914 | (Get FASTA) | NCBI Sequence Viewer | |
XP_017177743 | (Get FASTA) | NCBI Sequence Viewer | |
XP_017177745 | (Get FASTA) | NCBI Sequence Viewer | |
XP_030098449 | (Get FASTA) | NCBI Sequence Viewer | |
XP_036009016 | (Get FASTA) | NCBI Sequence Viewer | |
XP_036009017 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH30314 | (Get FASTA) | NCBI Sequence Viewer |
BAC33091 | (Get FASTA) | NCBI Sequence Viewer | |
BAC35386 | (Get FASTA) | NCBI Sequence Viewer | |
BAE31234 | (Get FASTA) | NCBI Sequence Viewer | |
BAE41226 | (Get FASTA) | NCBI Sequence Viewer | |
EDL17596 | (Get FASTA) | NCBI Sequence Viewer | |
EDL17597 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSMUSP00000056105 | ||
ENSMUSP00000056105.6 | |||
ENSMUSP00000101868 | |||
ENSMUSP00000101868.2 | |||
ENSMUSP00000101869 | |||
ENSMUSP00000101869.2 | |||
ENSMUSP00000101870 | |||
ENSMUSP00000101870.2 | |||
ENSMUSP00000116730.2 | |||
GenBank Protein | Q8K2R5 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_666371 ⟸ NM_146259 |
- UniProtKB: | Q3U7Y5 (UniProtKB/Swiss-Prot), Q3TEM2 (UniProtKB/Swiss-Prot), Q8C8B7 (UniProtKB/Swiss-Prot), Q8K2R5 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_006507911 ⟸ XM_006507848 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q3U7Y5 (UniProtKB/Swiss-Prot), Q3TEM2 (UniProtKB/Swiss-Prot), Q8C8B7 (UniProtKB/Swiss-Prot), Q8K2R5 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_006507913 ⟸ XM_006507850 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q3U7Y5 (UniProtKB/Swiss-Prot), Q3TEM2 (UniProtKB/Swiss-Prot), Q8C8B7 (UniProtKB/Swiss-Prot), Q8K2R5 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_006507914 ⟸ XM_006507851 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q3U7Y5 (UniProtKB/Swiss-Prot), Q3TEM2 (UniProtKB/Swiss-Prot), Q8C8B7 (UniProtKB/Swiss-Prot), Q8K2R5 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_017177745 ⟸ XM_017322256 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q3U7Y5 (UniProtKB/Swiss-Prot), Q3TEM2 (UniProtKB/Swiss-Prot), Q8C8B7 (UniProtKB/Swiss-Prot), Q8K2R5 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_017177743 ⟸ XM_017322254 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q3U7Y5 (UniProtKB/Swiss-Prot), Q3TEM2 (UniProtKB/Swiss-Prot), Q8C8B7 (UniProtKB/Swiss-Prot), Q8K2R5 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | NP_001349118 ⟸ NM_001362189 |
- UniProtKB: | Q8K2R5 (UniProtKB/Swiss-Prot), Q3U7Y5 (UniProtKB/Swiss-Prot), Q3TEM2 (UniProtKB/Swiss-Prot), Q8C8B7 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | NP_001349119 ⟸ NM_001362190 |
- UniProtKB: | Q8K2R5 (UniProtKB/Swiss-Prot), Q3U7Y5 (UniProtKB/Swiss-Prot), Q3TEM2 (UniProtKB/Swiss-Prot), Q8C8B7 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_030098449 ⟸ XM_030242589 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q8K2R5 (UniProtKB/Swiss-Prot), Q3U7Y5 (UniProtKB/Swiss-Prot), Q3TEM2 (UniProtKB/Swiss-Prot), Q8C8B7 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | NP_001349121 ⟸ NM_001362192 |
- UniProtKB: | Q8K2R5 (UniProtKB/Swiss-Prot), Q3U7Y5 (UniProtKB/Swiss-Prot), Q3TEM2 (UniProtKB/Swiss-Prot), Q8C8B7 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | NP_001349120 ⟸ NM_001362191 |
- UniProtKB: | Q8K2R5 (UniProtKB/Swiss-Prot), Q3U7Y5 (UniProtKB/Swiss-Prot), Q3TEM2 (UniProtKB/Swiss-Prot), Q8C8B7 (UniProtKB/Swiss-Prot) |
Ensembl Acc Id: | ENSMUSP00000116730 ⟸ ENSMUST00000144721 |
Ensembl Acc Id: | ENSMUSP00000056105 ⟸ ENSMUST00000054415 |
Ensembl Acc Id: | ENSMUSP00000101868 ⟸ ENSMUST00000106261 |
Ensembl Acc Id: | ENSMUSP00000101870 ⟸ ENSMUST00000106263 |
Ensembl Acc Id: | ENSMUSP00000101869 ⟸ ENSMUST00000106262 |
RefSeq Acc Id: | XP_036009017 ⟸ XM_036153124 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q8K2R5 (UniProtKB/Swiss-Prot), Q3U7Y5 (UniProtKB/Swiss-Prot), Q3TEM2 (UniProtKB/Swiss-Prot), Q8C8B7 (UniProtKB/Swiss-Prot) |
RefSeq Acc Id: | XP_036009016 ⟸ XM_036153123 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q8K2R5 (UniProtKB/Swiss-Prot), Q3U7Y5 (UniProtKB/Swiss-Prot), Q3TEM2 (UniProtKB/Swiss-Prot), Q8C8B7 (UniProtKB/Swiss-Prot) |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q8K2R5-F1-model_v2 | AlphaFold | Q8K2R5 | 1-619 | view protein structure |
RGD ID: | 8665721 | ||||||||
Promoter ID: | EPDNEW_M10891 | ||||||||
Type: | single initiation site | ||||||||
Name: | Zfp668_2 | ||||||||
Description: | Mus musculus zinc finger protein 668 , transcript variant 2,mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_M10892 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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RGD ID: | 8665723 | ||||||||
Promoter ID: | EPDNEW_M10892 | ||||||||
Type: | single initiation site | ||||||||
Name: | Zfp668_1 | ||||||||
Description: | Mus musculus zinc finger protein 668 , transcript variant 2,mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_M10891 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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RGD ID: | 6842426 | ||||||||
Promoter ID: | MM_KWN:52824 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen | ||||||||
Transcripts: | ENSMUST00000106261, ENSMUST00000106262, ENSMUST00000106263, OTTMUST00000053859, OTTMUST00000053863, OTTMUST00000053864 | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:2442943 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000049728 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENSMUST00000054415 | ENTREZGENE |
ENSMUST00000054415.12 | UniProtKB/Swiss-Prot | |
ENSMUST00000106261 | ENTREZGENE | |
ENSMUST00000106261.8 | UniProtKB/Swiss-Prot | |
ENSMUST00000106262 | ENTREZGENE | |
ENSMUST00000106262.2 | UniProtKB/Swiss-Prot | |
ENSMUST00000106263 | ENTREZGENE | |
ENSMUST00000106263.8 | UniProtKB/Swiss-Prot | |
ENSMUST00000144721.2 | UniProtKB/TrEMBL | |
Gene3D-CATH | Classic Zinc Finger | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
InterPro | Snail/Krueppel_Znf | UniProtKB/Swiss-Prot |
ZnF_C2H2-type_TF | UniProtKB/TrEMBL | |
Znf_C2H2_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Znf_C2H2_type | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | mmu:244219 | UniProtKB/Swiss-Prot |
MGD | MGI:2442943 | ENTREZGENE |
NCBI Gene | 244219 | ENTREZGENE |
PANTHER | C2H2-TYPE DOMAIN-CONTAINING PROTEIN-RELATED | UniProtKB/TrEMBL |
TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED | UniProtKB/TrEMBL | |
ZINC FINGER PROTEIN | UniProtKB/Swiss-Prot | |
ZINC FINGER PROTEIN 423 | UniProtKB/Swiss-Prot | |
Pfam | zf-C2H2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
zf-C2H2_6 | UniProtKB/Swiss-Prot | |
PhenoGen | Zfp668 | PhenoGen |
PROSITE | ZINC_FINGER_C2H2_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
ZINC_FINGER_C2H2_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SMART | ZnF_C2H2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | SSF57667 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | D3Z404_MOUSE | UniProtKB/TrEMBL |
Q3TEM2 | ENTREZGENE | |
Q3U7Y5 | ENTREZGENE | |
Q8C8B7 | ENTREZGENE | |
Q8K2R5 | ENTREZGENE, UniProtKB/Swiss-Prot | |
UniProt Secondary | Q3TEM2 | UniProtKB/Swiss-Prot |
Q3U7Y5 | UniProtKB/Swiss-Prot | |
Q8C8B7 | UniProtKB/Swiss-Prot |