Rhcg (Rhesus blood group-associated C glycoprotein) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Rhcg (Rhesus blood group-associated C glycoprotein) Mus musculus
Analyze
Symbol: Rhcg
Name: Rhesus blood group-associated C glycoprotein
RGD ID: 1552784
MGI Page MGI
Description: Enables ammonium channel activity. Involved in ammonium transmembrane transport and regulation of pH. Located in apical plasma membrane. Is expressed in medulla oblongata basal plate ventricular layer; renal calyx; spinal cord ventricular layer; and telencephalon. Orthologous to human RHCG (Rh family C glycoprotein).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ammonium transporter Rh type C; BB065800; rh family type C glycoprotein; Rh type C glycoprotein; rhesus blood group family type C glycoprotein; rhesus-associated C glycoprotein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39779,243,111 - 79,267,405 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl779,243,111 - 79,267,405 (-)EnsemblGRCm39 Ensembl
GRCm38779,593,363 - 79,617,657 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl779,593,363 - 79,617,657 (-)EnsemblGRCm38mm10GRCm38
MGSCv37786,738,249 - 86,762,543 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36779,466,882 - 79,491,161 (-)NCBIMGSCv36mm8
Celera776,996,917 - 77,021,608 (-)NCBICelera
Cytogenetic Map7D2NCBI
cM Map745.09NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Effect of hypokalemia on renal expression of the ammonia transporter family members, Rh B Glycoprotein and Rh C Glycoprotein, in the rat kidney. Han KH, etal., Am J Physiol Renal Physiol. 2011 Oct;301(4):F823-32. doi: 10.1152/ajprenal.00266.2011. Epub 2011 Jul 13.
2. Aldosterone requires vasopressin V1a receptors on intercalated cells to mediate acid-base homeostasis. Izumi Y, etal., J Am Soc Nephrol. 2011 Apr;22(4):673-80. doi: 10.1681/ASN.2010050468. Epub 2011 Mar 17.
3. Effect of reduced renal mass on renal ammonia transporter family, Rh C glycoprotein and Rh B glycoprotein, expression. Kim HY, etal., Am J Physiol Renal Physiol. 2007 Oct;293(4):F1238-47. Epub 2007 Jul 25.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Renal expression of the ammonia transporters, Rhbg and Rhcg, in response to chronic metabolic acidosis. Seshadri RM, etal., Am J Physiol Renal Physiol. 2006 Feb;290(2):F397-408. Epub 2005 Sep 6.
10. Expression patterns of esophageal cancer deregulated genes in C57BL/6J mouse embryogenesis. Zhang J, etal., World J Gastroenterol 2004 Apr 15;10(8):1088-92.
Additional References at PubMed
PMID:10349636   PMID:10852913   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12388412   PMID:12477932   PMID:12595489   PMID:12730882   PMID:14681479   PMID:15489334   PMID:15576624  
PMID:15798090   PMID:16131648   PMID:16141072   PMID:16141073   PMID:16227429   PMID:16563829   PMID:16563831   PMID:16564721   PMID:16564723   PMID:16564724   PMID:16580864   PMID:19020613  
PMID:19129254   PMID:19321595   PMID:19429772   PMID:20462967   PMID:21267068   PMID:21368052   PMID:21677750   PMID:21873635   PMID:23195675   PMID:23281477   PMID:23904565   PMID:24338819  
PMID:24647713   PMID:24652796   PMID:26354748   PMID:29054531  


Genomics

Comparative Map Data
Rhcg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39779,243,111 - 79,267,405 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl779,243,111 - 79,267,405 (-)EnsemblGRCm39 Ensembl
GRCm38779,593,363 - 79,617,657 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl779,593,363 - 79,617,657 (-)EnsemblGRCm38mm10GRCm38
MGSCv37786,738,249 - 86,762,543 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36779,466,882 - 79,491,161 (-)NCBIMGSCv36mm8
Celera776,996,917 - 77,021,608 (-)NCBICelera
Cytogenetic Map7D2NCBI
cM Map745.09NCBI
RHCG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381589,471,407 - 89,496,583 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1589,471,398 - 89,496,589 (-)EnsemblGRCh38hg38GRCh38
GRCh371590,014,638 - 90,039,814 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361587,815,642 - 87,840,803 (-)NCBINCBI36Build 36hg18NCBI36
Build 341587,815,645 - 87,840,803NCBI
Celera1566,417,127 - 66,442,288 (-)NCBICelera
Cytogenetic Map15q26.1NCBI
HuRef1566,127,581 - 66,152,746 (-)NCBIHuRef
CHM1_11589,855,641 - 89,880,764 (-)NCBICHM1_1
T2T-CHM13v2.01587,227,437 - 87,252,613 (-)NCBIT2T-CHM13v2.0
Rhcg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81142,941,046 - 142,965,242 (-)NCBIGRCr8
mRatBN7.21133,531,704 - 133,555,902 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1133,531,716 - 133,555,876 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1141,441,386 - 141,465,168 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01148,610,769 - 148,634,552 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01141,528,475 - 141,552,260 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01141,325,854 - 141,349,881 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1141,325,856 - 141,349,881 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01142,286,922 - 142,310,949 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41135,361,418 - 135,386,461 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11135,439,824 - 135,464,867 (-)NCBI
Celera1125,594,825 - 125,618,934 (-)NCBICelera
Cytogenetic Map1q31NCBI
Rhcg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541615,639,551 - 15,654,293 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541615,639,425 - 15,657,708 (+)NCBIChiLan1.0ChiLan1.0
RHCG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21679,021,969 - 79,050,885 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11582,726,346 - 82,755,232 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01568,165,708 - 68,190,964 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11587,372,238 - 87,397,011 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1587,372,238 - 87,397,011 (-)Ensemblpanpan1.1panPan2
RHCG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1352,503,172 - 52,526,362 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl352,503,176 - 52,526,719 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha355,136,730 - 55,159,917 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0352,919,695 - 52,942,920 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl352,918,628 - 52,943,290 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1352,441,812 - 52,464,994 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0352,652,116 - 52,675,289 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0352,992,155 - 53,015,328 (-)NCBIUU_Cfam_GSD_1.0
Rhcg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640130,981,170 - 131,005,380 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648315,328,364 - 15,353,404 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648315,329,147 - 15,353,301 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RHCG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl755,046,245 - 55,071,475 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1755,046,244 - 55,071,504 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2760,022,002 - 60,039,452 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RHCG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1298,015,391 - 8,040,811 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl298,015,620 - 8,040,486 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605938,774,862 - 38,799,656 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rhcg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476816,623,599 - 16,644,189 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476816,623,667 - 16,644,149 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rhcg
1346 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:961
Count of miRNA genes:512
Interacting mature miRNAs:605
Transcripts:ENSMUST00000032766, ENSMUST00000161084, ENSMUST00000172788
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)761849748102749207Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
26884381Bzwq2_mbi-zygomatic width QTL 2, 5 week (mouse)76524974896949207Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767290094101290240Mouse
1301663Skull9_mskull morphology 9 (mouse)Not determined75732612191326352Mouse
14746989Manh62_mmandible shape 62 (mouse)775742528109742528Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
1301383Aem2_manti-erythrocyte autoantibody modifier 2 (mouse)Not determined76413542498135653Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse
27095937Ulnl7_mulna length 7, 10 week (mouse)76644974898349207Mouse
11565101Tsve1_mvariable short tail (Tsv) enhancer 1 (mouse)75588950887142720Mouse
1300620Pgia21_mproteoglycan induced arthritis 21 (mouse)Not determined767290094101290240Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
10054064Bwq11_mbody weight QTL 11 (mouse)Not determined75112495485125093Mouse
1357752Tabw_mtally ho asscoiated body weight (mouse)Not determined74919327883193390Mouse
10053685Eae43_mexperimental allergic encephalomyelitis susceptibility 43 (mouse)Not determined75112495485125093Mouse
1301566Adip3_madiposity 3 (mouse)Not determined775394215109394346Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301155Bpq7_mblood pressure QTL 7 (mouse)Not determined770143137104143379Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
4142212Png1_mPostnatal growth 1 (mouse)Not determined7432612192394346Mouse
1300654Bomd1_mbone mineral density 1 (mouse)Not determined768365595102365702Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)754819589116822815Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
1301465Egrm3_mearly growth rate (mouse)Not determined75732612191326352Mouse
1300952Hcs1_mhepatocarcinogenesis susceptibility 1 (mouse)Not determined75732612191326352Mouse
4142319Powg_mpost-ovarectomy weight gain (mouse)Not determined7285710592582163Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1301826Pgia3_mproteoglycan induced arthritis 3 (mouse)Not determined767290094101290240Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
26884418Bzwq7_mbi-zygomatic width QTL 7, 10 week (mouse)767849748105449207Mouse
10043973Obq29_mobesity QTL 29 (mouse)Not determined772263372106263372Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
12880417V125Dq5_mvitamin D active form serum level QTL 5 (mouse)74524974879249748Mouse
12880418V125Dq6_mvitamin D active form serum level QTL 6 (mouse)75214974886149748Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)774849748122199223Mouse
11532741Tbrs5_mtuberculosis resistance 5 (mouse)74915922783235415Mouse
1302141Fcsa6_mfemoral cross-sectional area 6 (mouse)Not determined74838446182384607Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
12801463Rta1_mretinal aging 1 (mouse)76716802789089989Mouse
11553865Stmm1c_mskin tumor modifier of MSM 1c (mouse)76578898699788986Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
11553866Stmm1d_mskin tumor modifier of MSM 1d (mouse)76578898699788986Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773049748125699172Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73729942587049208Mouse
11553869Stmm2b_mskin tumor modifier of MSM 2a (mouse)773725965107725965Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)769949748120499223Mouse

Markers in Region
Rhcg  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38779,600,494 - 79,601,680UniSTSGRCm38
MGSCv37786,745,380 - 86,746,566UniSTSGRCm37
Celera777,004,313 - 77,005,499UniSTS
Cytogenetic Map7D3UniSTS
cM Map735.0UniSTS
BB065800  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38779,593,402 - 79,593,486UniSTSGRCm38
MGSCv37786,738,288 - 86,738,372UniSTSGRCm37
Celera776,996,956 - 76,997,040UniSTS
Cytogenetic Map7D3UniSTS
cM Map735.0UniSTS
Whitehead/MRC_RH7768.43UniSTS
Rhcg  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7D3UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000032766   ⟹   ENSMUSP00000032766
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,243,111 - 79,267,405 (-)Ensembl
GRCm38.p6 Ensembl779,593,363 - 79,617,657 (-)Ensembl
Ensembl Acc Id: ENSMUST00000161084   ⟹   ENSMUSP00000134005
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,253,514 - 79,257,621 (-)Ensembl
GRCm38.p6 Ensembl779,603,766 - 79,607,873 (-)Ensembl
Ensembl Acc Id: ENSMUST00000172788   ⟹   ENSMUSP00000134230
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,243,117 - 79,244,677 (-)Ensembl
GRCm38.p6 Ensembl779,593,369 - 79,594,929 (-)Ensembl
RefSeq Acc Id: NM_019799   ⟹   NP_062773
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39779,243,111 - 79,267,405 (-)NCBI
GRCm38779,593,363 - 79,617,657 (-)ENTREZGENE
MGSCv37786,738,249 - 86,762,543 (-)RGD
Celera776,996,917 - 77,021,608 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006541004   ⟹   XP_006541067
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39779,243,111 - 79,267,152 (-)NCBI
GRCm38779,593,363 - 79,617,404 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250878   ⟹   XP_011249180
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39779,243,111 - 79,267,259 (-)NCBI
GRCm38779,593,363 - 79,617,498 (-)NCBI
Sequence:
RefSeq Acc Id: NP_062773   ⟸   NM_019799
- UniProtKB: Q8BVS0 (UniProtKB/Swiss-Prot),   Q9QXP0 (UniProtKB/Swiss-Prot),   B2RPX8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006541067   ⟸   XM_006541004
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011249180   ⟸   XM_011250878
- Peptide Label: isoform X1
- UniProtKB: B2RPX8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000032766   ⟸   ENSMUST00000032766
Ensembl Acc Id: ENSMUSP00000134230   ⟸   ENSMUST00000172788
Ensembl Acc Id: ENSMUSP00000134005   ⟸   ENSMUST00000161084
Protein Domains
Ammonium transporter AmtB-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9QXP0-F1-model_v2 AlphaFold Q9QXP0 1-498 view protein structure

Promoters
RGD ID:8664511
Promoter ID:EPDNEW_M10287
Type:multiple initiation site
Name:Rhcg_1
Description:Mus musculus Rhesus blood group-associated C glycoprotein , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38779,617,559 - 79,617,619EPDNEW
RGD ID:6841921
Promoter ID:MM_KWN:51243
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:OTTMUST00000061559
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36786,752,566 - 86,753,066 (-)MPROMDB
RGD ID:6841919
Promoter ID:MM_KWN:51244
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:OTTMUST00000061558
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36786,762,216 - 86,762,716 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1888517 AgrOrtholog
Ensembl Genes ENSMUSG00000030549 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032766 ENTREZGENE
  ENSMUST00000032766.5 UniProtKB/Swiss-Prot
  ENSMUST00000161084.3 UniProtKB/TrEMBL
  ENSMUST00000172788.3 UniProtKB/TrEMBL
Gene3D-CATH 1.10.3430.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ammonium/urea_transptr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NH4_transpt_AmtB-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhesusRHD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:56315 UniProtKB/Swiss-Prot
MGD MGI:1888517 ENTREZGENE
NCBI Gene 56315 ENTREZGENE
PANTHER AMMONIUM TRANSPORTER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AMMONIUM TRANSPORTER RH TYPE C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ammonium_transp UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rhcg PhenoGen
PRINTS RHESUSRHD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Ammonium transporter UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B2RPX8 ENTREZGENE, UniProtKB/TrEMBL
  G3UYA4_MOUSE UniProtKB/TrEMBL
  G3UYU7_MOUSE UniProtKB/TrEMBL
  Q8BVS0 ENTREZGENE
  Q9QXP0 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q8BVS0 UniProtKB/Swiss-Prot