Memo1 (mediator of cell motility 1) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Memo1 (mediator of cell motility 1) Mus musculus
Analyze
Symbol: Memo1
Name: mediator of cell motility 1
RGD ID: 1552554
MGI Page MGI
Description: Predicted to enable peptide binding activity. Predicted to be involved in regulation of microtubule-based process. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and sensory organ. Orthologous to human MEMO1 (mediator of cell motility 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 0610016J10Rik; D930048L02Rik; mediator of ErbB2-driven cell motility 1; memo-1; protein memo
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm11708   Gm18382   Gm18385   Gm18409  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391774,493,759 - 74,602,677 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1774,506,031 - 74,602,516 (-)EnsemblGRCm39 Ensembl
GRCm381774,186,764 - 74,295,682 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1774,199,036 - 74,295,521 (-)EnsemblGRCm38mm10GRCm38
MGSCv371774,600,040 - 74,694,203 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361774,105,655 - 74,199,965 (-)NCBIMGSCv36mm8
Celera1778,495,588 - 78,553,414 (-)NCBICelera
Cytogenetic Map17E2NCBI
cM Map1745.63NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal bone ossification  (IAGP)
abnormal coat/hair pigmentation  (IAGP)
abnormal cranial cartilage development  (IAGP)
abnormal craniofacial bone morphology  (IAGP)
abnormal cranium morphology  (IAGP)
abnormal embryo size  (IEA)
abnormal endochondral bone ossification  (IAGP)
abnormal nasal bridge morphology  (IAGP)
abnormal neurocranium morphology  (IAGP)
abnormal otic capsule morphology  (IAGP)
abnormal pericardium morphology  (IEA)
abnormal reflex  (IAGP)
abnormal sex gland morphology  (IAGP)
abnormal vasculogenesis  (IAGP)
absent gastric milk in neonates  (IAGP)
absent maxillary shelf  (IAGP)
absent palatine bone horizontal plate  (IAGP)
alopecia  (IAGP)
azoospermia  (IAGP)
basioccipital bone hypoplasia  (IAGP)
basisphenoid bone hypoplasia  (IAGP)
cleft palate  (IAGP)
cleft secondary palate  (IAGP)
decreased angiogenesis  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased subcutaneous adipose tissue amount  (IAGP)
decreased white adipose tissue amount  (IAGP)
domed cranium  (IAGP)
edema  (IEA)
embryonic lethality during organogenesis  (IAGP)
failure of endochondral bone ossification  (IAGP)
failure of palatal shelf elevation  (IAGP)
generalized edema  (IAGP)
hemorrhage  (IAGP)
improved glucose tolerance  (IAGP)
increased circulating calcium level  (IAGP)
increased circulating parathyroid hormone level  (IAGP)
increased insulin sensitivity  (IAGP)
increased vitamin D level  (IAGP)
kyphosis  (IAGP)
maxilla hypoplasia  (IAGP)
maxillary shelf hypoplasia  (IAGP)
palate bone hypoplasia  (IAGP)
palatine bone horizontal plate hypoplasia  (IAGP)
premature death  (IAGP)
premaxilla hypoplasia  (IAGP)
presphenoid bone hypoplasia  (IAGP)
preweaning lethality, complete penetrance  (IAGP)
small basisphenoid bone  (IAGP)
thick ventricular wall  (IEA)
trunk curl  (IEA)
unresponsive to tactile stimuli  (IEA)
weight loss  (IAGP)
wide coronal suture  (IAGP)
wide metopic suture  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. A gene expression map of human chromosome 21 orthologues in the mouse. Gitton Y, etal., Nature 2002 Dec 5;420(6915):586-90.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. From PREDs and open reading frames to cDNA isolation: revisiting the human chromosome 21 transcription map. Reymond A, etal., Genomics 2001 Nov;78(1-2):46-54.
5. Human chromosome 21 gene expression atlas in the mouse. Reymond A, etal., Nature 2002 Dec 5;420(6915):582-6.
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:14681479   PMID:15489334   PMID:16141072  
PMID:16141073   PMID:17077023   PMID:17967808   PMID:18045866   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:24056085   PMID:24714781   PMID:24917593   PMID:26746790  
PMID:27113764   PMID:27626380   PMID:29180744   PMID:29578408   PMID:30038585   PMID:31277925   PMID:32291966   PMID:32325033   PMID:32706793   PMID:36967231   PMID:38355793  


Genomics

Comparative Map Data
Memo1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391774,493,759 - 74,602,677 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1774,506,031 - 74,602,516 (-)EnsemblGRCm39 Ensembl
GRCm381774,186,764 - 74,295,682 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1774,199,036 - 74,295,521 (-)EnsemblGRCm38mm10GRCm38
MGSCv371774,600,040 - 74,694,203 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361774,105,655 - 74,199,965 (-)NCBIMGSCv36mm8
Celera1778,495,588 - 78,553,414 (-)NCBICelera
Cytogenetic Map17E2NCBI
cM Map1745.63NCBI
MEMO1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38231,867,823 - 32,011,008 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl231,865,060 - 32,011,230 (-)EnsemblGRCh38hg38GRCh38
GRCh37232,092,892 - 32,236,077 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36231,946,396 - 32,089,202 (-)NCBINCBI36Build 36hg18NCBI36
Build 34232,004,546 - 32,147,349NCBI
Celera231,937,749 - 32,080,568 (-)NCBICelera
Cytogenetic Map2p22.3NCBI
HuRef231,832,452 - 31,923,497 (-)NCBIHuRef
CHM1_1232,022,713 - 32,165,883 (-)NCBICHM1_1
T2T-CHM13v2.0231,916,231 - 32,059,416 (-)NCBIT2T-CHM13v2.0
Memo1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8626,895,497 - 26,986,248 (+)NCBIGRCr8
mRatBN7.2621,144,525 - 21,234,363 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl621,125,639 - 21,234,561 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx621,475,758 - 21,564,825 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0621,791,599 - 21,880,664 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0621,272,051 - 21,361,118 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0622,362,483 - 22,409,583 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl622,362,484 - 22,409,579 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0632,248,023 - 32,295,278 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4621,149,520 - 21,197,328 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1621,152,474 - 21,200,281 (+)NCBI
Celera620,744,198 - 20,791,297 (+)NCBICelera
Cytogenetic Map6q13NCBI
Memo1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955441332,864 - 391,838 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955441332,864 - 391,836 (-)NCBIChiLan1.0ChiLan1.0
MEMO1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21294,478,056 - 94,622,140 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A94,469,913 - 94,638,453 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A31,887,899 - 32,032,155 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A31,956,294 - 32,098,889 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A31,956,831 - 32,051,337 (-)Ensemblpanpan1.1panPan2
MEMO1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11725,231,982 - 25,298,786 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1725,237,661 - 25,303,462 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1725,031,330 - 25,153,198 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01725,801,068 - 25,923,444 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1725,799,405 - 25,923,546 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11725,101,370 - 25,223,192 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01725,166,579 - 25,295,146 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01725,268,985 - 25,394,281 (-)NCBIUU_Cfam_GSD_1.0
Memo1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629269,327,591 - 69,443,276 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364931,449,152 - 1,506,716 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364931,396,106 - 1,506,716 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MEMO1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3107,542,096 - 107,658,455 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13107,542,045 - 107,657,195 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23114,306,301 - 114,420,268 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MEMO1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11475,480,890 - 75,625,264 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1475,557,793 - 75,627,858 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604536,438,746 - 36,590,242 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Memo1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473813,575,542 - 13,687,497 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473813,575,542 - 13,687,002 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Memo1
3844 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:154
Count of miRNA genes:140
Interacting mature miRNAs:142
Transcripts:ENSMUST00000078459
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141758Pstc5_mperiosteal circumference 5 (mouse)Not determined175710765191107803Mouse
4142201Obrq15_mobesity resistance QTL 15 (mouse)Not determined5753444780885776Mouse
4141879Chlq9_mcirculating hormone level QTL 9 (mouse)Not determined175175842585758612Mouse
1357532Bmch7_mbone mechanical trait 7 (mouse)Not determined175175842585758612Mouse
11528551Sluc32_msusceptibility to lung cancer 32 (mouse)176230101095294699Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
11565819Ppipq1_mprepulse inhibition percentage QTL 1 (mouse)177105765575377655Mouse
12910536Nrq8a_mnoise-induced hearing loss resistant QTL 8a (mouse)175710765191107803Mouse
1357528Nhdlq3_mnon-HDL QTL 3 (mouse)Not determined177339513295294699Mouse
12910537Nrq8_mnoise-induced hearing loss resistant QTL 8 (mouse)175710765191107803Mouse
4141040Hmtb9_mhemostasis and thrombosis rebleeding time 9 (mouse)Not determined5758908991589197Mouse
4142256Nilac12_mnicotine induced locomotor activity 12 (mouse)Not determined176894131995294699Mouse
1302017Aliq3_macute lung injury QTL 3 (mouse)Not determined176388554895294699Mouse
1357447Heal13_mwound healing/regeneration 13 (mouse)Not determined175710765191107803Mouse
26884428Cvht3_mcranial vault height 3, 5 week (mouse)174651092682407429Mouse
14928308Manh82_mmandible shape 82 (mouse)176631524395294699Mouse
1357646Axtq3_manxiety QTL 3 (mouse)Not determined177458908990395270Mouse
1301107Scc4_mcolon tumor susceptibility 4 (mouse)Not determined176230101095294699Mouse
11039498Ltpr7b_mLeishmania tropica response 7b (mouse)177070119895294699Mouse
11039499Ltpr7a_mLeishmania tropica response 7a (mouse)177070119895294699Mouse
11039500Ltpr7c_mLeishmania tropica response 7c (mouse)177070119895294699Mouse
1357552Aaj4_manxiety in A/J 4 (mouse)Not determined177458908990395270Mouse
4141011Bmd26_mbone mineral density 26 (mouse)Not determined175710765191107803Mouse
1300735Pgia20_mproteoglycan induced arthritis 20 (mouse)Not determined175710765191107803Mouse
1357754Ahl3_mage related hearing loss 3 (mouse)Not determined175020395784204103Mouse
4142414Pregq4_mpregnancy QTL 4 (mouse)Not determined175753444793507179Mouse
11039514Ltpr7_mLeishmania tropica response 7 (mouse)177070119895294699Mouse
1301728Ffal1_mfree fatty acid level 1 (mouse)Not determined176521493895294699Mouse
13464254Ifvrq3_minfluenza virus resistance QTL 3 (mouse)176795765583908089Mouse
4141195Nilac11_mnicotine induced locomotor activity 11 (mouse)Not determined177339513295294699Mouse
4141319Hmtb8_mhemostasis and thrombosis rebleeding time 8 (mouse)Not determined4053444774534623Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
15039324Nmrs48_mNAFLD-associated magnetic resonance shift 48 (mouse)174093918774939187Mouse
4141697Hbnr3_mHeligmosomoides bakeri nematode resistance 3 (mouse)Not determined7410765193507179Mouse

Markers in Region
AA990452  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381774,248,184 - 74,248,322UniSTSGRCm38
MGSCv371774,647,524 - 74,647,662UniSTSGRCm37
Celera1778,543,095 - 78,543,233UniSTS
Cytogenetic Map17E2UniSTS
Whitehead/MRC_RH17872.02UniSTS
D17Mit38  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381774,282,094 - 74,282,202UniSTSGRCm38
MGSCv371774,681,434 - 74,681,542UniSTSGRCm37
Celera1778,577,138 - 78,577,222UniSTS
Cytogenetic Map17E2UniSTS
cM Map1745.3UniSTS
Whitehead Genetic1740.4UniSTS
Whitehead/MRC_RH17870.0UniSTS
Whitehead_YAC17 UniSTS
0610016J10Rik  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17E2UniSTS
cM Map17 UniSTS
Memo1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17E2UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_133771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006525109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011246713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003952211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_385387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC169506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF363447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF466279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT010445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000078459   ⟹   ENSMUSP00000077553
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1774,507,697 - 74,601,785 (-)Ensembl
GRCm38.p6 Ensembl1774,200,702 - 74,294,790 (-)Ensembl
Ensembl Acc Id: ENSMUST00000232861
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1774,561,670 - 74,562,980 (-)Ensembl
GRCm38.p6 Ensembl1774,254,675 - 74,255,985 (-)Ensembl
Ensembl Acc Id: ENSMUST00000232987   ⟹   ENSMUSP00000156956
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1774,508,066 - 74,602,491 (-)Ensembl
GRCm38.p6 Ensembl1774,201,071 - 74,295,496 (-)Ensembl
Ensembl Acc Id: ENSMUST00000232989   ⟹   ENSMUSP00000156437
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1774,507,697 - 74,601,796 (-)Ensembl
GRCm38.p6 Ensembl1774,200,702 - 74,294,801 (-)Ensembl
Ensembl Acc Id: ENSMUST00000233144   ⟹   ENSMUSP00000156440
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1774,551,973 - 74,602,516 (-)Ensembl
GRCm38.p6 Ensembl1774,244,978 - 74,295,521 (-)Ensembl
Ensembl Acc Id: ENSMUST00000233176   ⟹   ENSMUSP00000156929
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1774,507,713 - 74,601,794 (-)Ensembl
GRCm38.p6 Ensembl1774,200,718 - 74,294,799 (-)Ensembl
Ensembl Acc Id: ENSMUST00000233214
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1774,559,623 - 74,601,836 (-)Ensembl
GRCm38.p6 Ensembl1774,252,628 - 74,294,841 (-)Ensembl
Ensembl Acc Id: ENSMUST00000233422
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1774,507,697 - 74,595,643 (-)Ensembl
GRCm38.p6 Ensembl1774,200,702 - 74,288,648 (-)Ensembl
Ensembl Acc Id: ENSMUST00000233495
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1774,508,111 - 74,537,496 (-)Ensembl
GRCm38.p6 Ensembl1774,201,116 - 74,230,501 (-)Ensembl
Ensembl Acc Id: ENSMUST00000233514   ⟹   ENSMUSP00000156607
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1774,506,031 - 74,601,858 (-)Ensembl
GRCm38.p6 Ensembl1774,199,036 - 74,294,863 (-)Ensembl
RefSeq Acc Id: NM_133771   ⟹   NP_598532
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391774,507,695 - 74,601,858 (-)NCBI
GRCm381774,200,700 - 74,294,863 (-)NCBI
MGSCv371774,600,040 - 74,694,203 (-)RGD
Celera1778,495,588 - 78,553,414 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006525109   ⟹   XP_006525172
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391774,493,759 - 74,602,677 (-)NCBI
GRCm381774,200,700 - 74,295,682 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011246713   ⟹   XP_011245015
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391774,493,759 - 74,602,571 (-)NCBI
GRCm381774,186,764 - 74,295,528 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036160831   ⟹   XP_036016724
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391774,493,759 - 74,602,571 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003952211
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391774,493,759 - 74,602,571 (-)NCBI
GRCm381774,186,764 - 74,295,532 (-)NCBI
Sequence:
RefSeq Acc Id: XR_385387
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391774,493,759 - 74,602,571 (-)NCBI
GRCm381774,186,764 - 74,295,533 (-)NCBI
Sequence:
RefSeq Acc Id: NP_598532   ⟸   NM_133771
- UniProtKB: Q91VH6 (UniProtKB/Swiss-Prot),   Q3TWT2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006525172   ⟸   XM_006525109
- Peptide Label: isoform X1
- UniProtKB: Q91VH6 (UniProtKB/Swiss-Prot),   Q3TWT2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011245015   ⟸   XM_011246713
- Peptide Label: isoform X3
- Sequence:
Ensembl Acc Id: ENSMUSP00000156607   ⟸   ENSMUST00000233514
Ensembl Acc Id: ENSMUSP00000156929   ⟸   ENSMUST00000233176
Ensembl Acc Id: ENSMUSP00000156440   ⟸   ENSMUST00000233144
Ensembl Acc Id: ENSMUSP00000156437   ⟸   ENSMUST00000232989
Ensembl Acc Id: ENSMUSP00000156956   ⟸   ENSMUST00000232987
Ensembl Acc Id: ENSMUSP00000077553   ⟸   ENSMUST00000078459
RefSeq Acc Id: XP_036016724   ⟸   XM_036160831
- Peptide Label: isoform X2
- UniProtKB: A0A3B2W7C9 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q91VH6-F1-model_v2 AlphaFold Q91VH6 1-297 view protein structure

Promoters
RGD ID:13676762
Promoter ID:EPDNEW_M22530
Type:initiation region
Name:Memo1_1
Description:Mus musculus mediator of cell motility 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381774,294,790 - 74,294,850EPDNEW
RGD ID:6828343
Promoter ID:MM_KWN:24186
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:ENSMUST00000078459,   NM_133771
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361774,694,031 - 74,695,277 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1924140 AgrOrtholog
Ensembl Genes ENSMUSG00000058704 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000078459.8 UniProtKB/TrEMBL
  ENSMUST00000232987.2 UniProtKB/TrEMBL
  ENSMUST00000232989 ENTREZGENE
  ENSMUST00000232989.2 UniProtKB/TrEMBL
  ENSMUST00000233144.2 UniProtKB/TrEMBL
  ENSMUST00000233176.2 UniProtKB/TrEMBL
  ENSMUST00000233514 ENTREZGENE
  ENSMUST00000233514.3 UniProtKB/Swiss-Prot
Gene3D-CATH LigB-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro MEMO1_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:76890 UniProtKB/Swiss-Prot
MGD MGI:1924140 ENTREZGENE
NCBI Gene 76890 ENTREZGENE
PANTHER PROTEIN MEMO1 UniProtKB/Swiss-Prot
  PROTEIN MEMO1 UniProtKB/TrEMBL
  PROTEIN MEMO1 UniProtKB/TrEMBL
  PTHR11060 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Memo UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Memo1 PhenoGen
UniProt A0A3B2W4G7_MOUSE UniProtKB/TrEMBL
  A0A3B2W4I2_MOUSE UniProtKB/TrEMBL
  A0A3B2W7C9 ENTREZGENE, UniProtKB/TrEMBL
  A0A3B2WCC1_MOUSE UniProtKB/TrEMBL
  A0A3F2YNL8_MOUSE UniProtKB/TrEMBL
  MEMO1_MOUSE UniProtKB/Swiss-Prot
  Q3TWT2 ENTREZGENE, UniProtKB/TrEMBL
  Q91VH6 ENTREZGENE