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Gene: Nceh1 (neutral cholesterol ester hydrolase 1) Mus musculus

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Symbol:

Nceh1

Name:

neutral cholesterol ester hydrolase 1

RGD ID:

1552527

MGI Page

MGI

Description:

Enables phosphate ion binding activity and serine hydrolase activity. Involved in ether lipid metabolic process. Acts upstream of or within protein dephosphorylation and xenobiotic metabolic process. Located in membrane. Is expressed in nervous system; retina; and tooth. Orthologous to human NCEH1 (neutral cholesterol ester hydrolase 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

2-acetyl MAGE hydrolase; Aad; Aadacl1; acetylalkylglycerol acetylhydrolase; arylacetamide deacetylase-like 1; B230106I24Rik; chlorpyrifos oxon-binding protein; CPO; CPO-BP; Nceh

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NCEH1 (neutral cholesterol ester hydrolase 1)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Nceh1 (neutral cholesterol ester hydrolase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Nceh1 (neutral cholesterol ester hydrolase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NCEH1 (neutral cholesterol ester hydrolase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NCEH1 (neutral cholesterol ester hydrolase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nceh1 (neutral cholesterol ester hydrolase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NCEH1 (neutral cholesterol ester hydrolase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NCEH1 (neutral cholesterol ester hydrolase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nceh1 (neutral cholesterol ester hydrolase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Nceh1 (neutral cholesterol ester hydrolase 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	NCEH1 (neutral cholesterol ester hydrolase 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	nceh1b.1 (neutral cholesterol ester hydrolase 1b, tandem duplicate 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|ZFIN)
Danio rerio (zebrafish):	nceh1a (neutral cholesterol ester hydrolase 1a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid\|ZFIN)
Caenorhabditis elegans (roundworm):	F16F9.4	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	nceh-1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	trcs-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	T09B9.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	nceh1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PhylomeDB)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	27,237,153 - 27,299,112 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	27,237,114 - 27,338,757 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	27,183,004 - 27,245,266 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	27,182,965 - 27,284,608 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	27,081,926 - 27,143,833 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	27,374,077 - 27,435,984 (+)	NCBI		MGSCv36	mm8
Celera	3	27,145,396 - 27,207,661 (+)	NCBI		Celera
Cytogenetic Map	3	A3	NCBI
cM Map	3	10.82	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

disease of cellular proliferation (ISO)

Fanconi-Bickel syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-demecolcine (ISO)

1,2-dichloroethane (EXP)

1,2-dimethylhydrazine (EXP)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

2-acetyl-1-alkyl-sn-glycero-3-phosphocholine (EXP)

2-palmitoylglycerol (ISO)

3,4-methylenedioxymethamphetamine (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

4-hydroxyphenyl retinamide (EXP)

6-propyl-2-thiouracil (ISO)

acetamide (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

amitrole (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

Azoxymethane (EXP)

benzo[a]pyrene (EXP,ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (EXP,ISO)

bromobenzene (ISO)

Butylbenzyl phthalate (EXP)

cadmium atom (EXP)

cadmium dichloride (EXP,ISO)

CDP-choline (EXP)

CGP 52608 (ISO)

chlorpyrifos (EXP,ISO)

clofibrate (EXP,ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (EXP,ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

dextran sulfate (EXP)

diarsenic trioxide (ISO)

diazoxon (EXP)

dibenz[a,h]anthracene (EXP)

dibutyl phthalate (EXP)

dichloroacetic acid (EXP)

dichlorvos (EXP,ISO)

diethyl phthalate (EXP)

diisobutyl phthalate (EXP)

diisononyl phthalate (EXP)

diisopropyl fluorophosphate (EXP)

disulfiram (ISO)

ecothiopate iodide (EXP)

endosulfan (ISO)

entinostat (ISO)

epoxiconazole (EXP)

ethyl methanesulfonate (ISO)

fenitrothion (EXP)

fenofibrate (ISO)

folic acid (EXP)

formaldehyde (ISO)

fulvestrant (ISO)

furan (ISO)

gemfibrozil (ISO)

gentamycin (ISO)

gold atom (EXP)

gold(0) (EXP)

hydrogen peroxide (ISO)

indometacin (ISO)

ivermectin (ISO)

methimazole (ISO)

methyl methanesulfonate (ISO)

N-methyl-4-phenylpyridinium (ISO)

nickel atom (ISO)

paracetamol (EXP,ISO)

paraoxon (EXP)

paraquat (ISO)

parathion (EXP)

perfluorohexanesulfonic acid (EXP)

perfluorononanoic acid (EXP)

perfluorooctane-1-sulfonic acid (EXP)

perfluorooctanoic acid (EXP,ISO)

phenobarbital (EXP)

pirinixic acid (EXP,ISO)

profenofos (EXP)

quercetin (ISO)

rotenone (ISO)

silicon dioxide (EXP)

sodium fluoride (EXP)

sulfadimethoxine (ISO)

tetrachloromethane (EXP)

tetrahydropalmatine (ISO)

tetraphene (EXP)

thioacetamide (ISO)

titanium dioxide (EXP)

trichloroethene (ISO)

trichostatin A (ISO)

triclosan (ISO)

tris(2-butoxyethyl) phosphate (ISO)

valproic acid (ISO)

vincristine (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

ether lipid metabolic process (IDA)

lipid catabolic process (IEA)

protein dephosphorylation (IDA)

xenobiotic metabolic process (IMP)

Cellular Component

endoplasmic reticulum (IEA)

membrane (IDA)

plasma membrane (IEA)

Molecular Function

acetylalkylglycerol acetylhydrolase activity (IEA)

phosphate ion binding (IDA)

serine hydrolase activity (IBA,IDA)

Molecular Pathway Annotations Click to see Annotation Detail View

bile acid transport pathway (IEA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal cholesterol homeostasis (IAGP)

abnormal macrophage physiology (IAGP)

abnormal xenobiotic pharmacokinetics (IAGP)

decreased cholesterol efflux (IAGP)

increased circulating cholesterol level (IAGP)

increased circulating free fatty acids level (IAGP)

increased circulating glucose level (IAGP)

increased circulating triglyceride level (IAGP)

increased susceptibility to atherosclerosis (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	MGDs mouse GO annotations	MGD data from the GO Consortium
2.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Database resources of the National Center for Biotechnology Information.	Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12477932	PMID:12520002	PMID:12904583	PMID:14610273	PMID:15368895	PMID:15489334
PMID:15840715	PMID:16141072	PMID:16141073	PMID:18782767	PMID:18799693	PMID:19592704	PMID:19723498	PMID:20625037	PMID:21111707	PMID:21267068	PMID:21873635	PMID:21944698
PMID:23390484	PMID:24868095	PMID:24891333	PMID:25044020	PMID:30282838	PMID:30550785	PMID:31598710	PMID:32325033	PMID:38664801

Genomics

Comparative Map Data

Nceh1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	27,237,153 - 27,299,112 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	27,237,114 - 27,338,757 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	27,183,004 - 27,245,266 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	27,182,965 - 27,284,608 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	27,081,926 - 27,143,833 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	27,374,077 - 27,435,984 (+)	NCBI		MGSCv36	mm8
Celera	3	27,145,396 - 27,207,661 (+)	NCBI		Celera
Cytogenetic Map	3	A3	NCBI
cM Map	3	10.82	NCBI

NCEH1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	172,630,249 - 172,711,067 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	172,630,249 - 172,711,218 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	172,348,039 - 172,428,857 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	173,831,129 - 173,911,700 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	170,747,009 - 170,827,586 (-)	NCBI		Celera
Cytogenetic Map	3	q26.31	NCBI
HuRef	3	169,719,068 - 169,799,827 (-)	NCBI		HuRef
CHM1_1	3	172,311,351 - 172,391,945 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	175,415,304 - 175,496,818 (-)	NCBI		T2T-CHM13v2.0

Nceh1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	112,003,677 - 112,064,274 (+)	NCBI		GRCr8
mRatBN7.2	2	110,074,985 - 110,135,592 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	110,074,957 - 110,135,588 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	116,730,236 - 116,788,524 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	114,842,807 - 114,901,088 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	109,559,833 - 109,617,962 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	112,868,834 - 112,932,622 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	112,868,707 - 112,934,953 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	132,589,874 - 132,651,914 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	113,069,474 - 113,128,268 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	112,976,297 - 113,072,425 (+)	NCBI
Celera	2	105,286,870 - 105,345,089 (+)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

Nceh1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	2,663,661 - 2,725,814 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	2,666,905 - 2,725,814 (-)	NCBI	ChiLan1.0	ChiLan1.0

NCEH1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	170,504,679 - 170,593,864 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	170,516,737 - 170,598,632 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	169,636,862 - 169,718,168 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	177,818,088 - 177,899,440 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	177,818,088 - 177,899,438 (-)	Ensembl	panpan1.1		panPan2

NCEH1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	36,813,691 - 36,874,642 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	36,817,382 - 36,874,610 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	45,826,190 - 45,885,869 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	36,898,894 - 36,959,064 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	36,898,899 - 36,959,047 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	36,837,449 - 36,897,206 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	36,806,038 - 36,865,963 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	37,063,672 - 37,123,827 (-)	NCBI		UU_Cfam_GSD_1.0

Nceh1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	103,493,909 - 103,555,709 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936593	66,509 - 127,625 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936593	66,098 - 128,056 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NCEH1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	111,139,621 - 111,248,079 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	111,148,677 - 111,207,285 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	120,035,744 - 120,052,854 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NCEH1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	16,724,037 - 16,812,235 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	16,723,664 - 16,812,329 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	25,485,023 - 25,573,900 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nceh1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	50,653,283 - 50,731,456 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	50,650,645 - 50,731,445 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Nceh1
3581 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	1529
Count of miRNA genes:	757
Interacting mature miRNAs:	969
Transcripts:	ENSMUST00000046515, ENSMUST00000091284, ENSMUST00000129412, ENSMUST00000138947, ENSMUST00000140872
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4142399	Aec1_m	autoimmune exocrinopathy 1 (mouse)			Not determined			7586174	102690034	Mouse
4141116	Lgaq4_m	late growth adjusted QTL 4 (mouse)			Not determined			10249221	83184946	Mouse
4141563	Lgq3_m	late growth QTL 3 (mouse)			Not determined			10249221	83184946	Mouse
1357584	Splq6_m	spleen weight QTL 6 (mouse)			Not determined		3	10249221	83184946	Mouse
1301114	Ssial2_m	susceptibility to sialadenitis 2 (mouse)			Not determined		3	20174862	54180103	Mouse
26884436	Zlq3_m	zygomatic length QTL 3, 10 week (mouse)					3	3265060	142405761	Mouse
12904010	Cfq8_m	conditioned fear QTL 8 (mouse)					3	24768232	31332103	Mouse
26884427	Cvht4_m	cranial vault height 4, 10 week (mouse)					3	16054164	109707316	Mouse
4142092	Tgq13_m	triglyceride QTL 13 (mouse)			Not determined			18288168	52288168	Mouse
1357440	Hrtpq1_m	heart weight percentage QTL 1 (mouse)			Not determined		3	10249221	83184946	Mouse
13432186	Rotse1_m	rotarod training saline/ethanol 1 (mouse)					3	26655227	28355227	Mouse
4141255	W10q3_m	weight 10 weeks QTL 3 (mouse)			Not determined			10249221	83184946	Mouse
1558925	Hivan1_m	HIV-associated nephropathy 1 (mouse)			Not determined		3	7586174	68716946	Mouse
39128206	Lwq18_m	liver weight QTL 18 (mouse)					3	10249221	83184946	Mouse
13207570	Tcq12_m	total cholesterol QTL 12 (mouse)					3	16504164	130163649	Mouse
1300559	Thypr3_m	thymocyte proliferative response 3 (mouse)			Not determined		3	4525419	38525519	Mouse
1301358	Eae20_m	experimental allergic encephalomyelitis 20 (mouse)			Not determined		3	11630453	45630591	Mouse

Markers in Region

D3Mit305

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	3	27,198,957 - 27,199,064	UniSTS	GRCm38
MGSCv37	3	27,097,879 - 27,097,986	UniSTS	GRCm37
Celera	3	27,161,376 - 27,161,487	UniSTS
Cytogenetic Map	3	A3	UniSTS
cM Map	3	11.2	UniSTS
Whitehead Genetic	3	9.8	UniSTS
Whitehead/MRC_RH	3	306.54	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_178772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011249684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC121099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC157919	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK034339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK038691	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK045363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK085767	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK128968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK135837	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159748	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK173158	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC082569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000046515 ⟹ ENSMUSP00000045864

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	27,237,114 - 27,299,107 (+)	Ensembl
GRCm38.p6 Ensembl	3	27,182,965 - 27,244,958 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000091284 ⟹ ENSMUSP00000088829

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	27,237,153 - 27,338,757 (+)	Ensembl
GRCm38.p6 Ensembl	3	27,183,004 - 27,284,608 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000129412

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	27,237,153 - 27,280,449 (+)	Ensembl
GRCm38.p6 Ensembl	3	27,183,004 - 27,226,300 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000138947 ⟹ ENSMUSP00000115209

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	27,237,153 - 27,276,872 (+)	Ensembl
GRCm38.p6 Ensembl	3	27,183,004 - 27,222,723 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000140872

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	27,242,590 - 27,293,733 (+)	Ensembl
GRCm38.p6 Ensembl	3	27,188,441 - 27,239,584 (+)	Ensembl

RefSeq Acc Id:

NM_178772 ⟹ NP_848887

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	27,237,153 - 27,299,107 (+)	NCBI
GRCm38	3	27,183,004 - 27,244,911 (+)	NCBI
MGSCv37	3	27,081,926 - 27,143,833 (+)	RGD
Celera	3	27,145,396 - 27,207,661 (+)	RGD
cM Map	3		ENTREZGENE

Sequence:

show sequence

AGAAACTTGCTGGTCTTCTCCGGGTAGCATCGCACCGTACCGCGGTCAGCTCCGGACAGCCCGG
CCTGGGGACAATGAGGTCGTCATGCGTCCTACTGGCCGCTCTGCTGGCTCTGGCTGCCTACTAC
GTGTACATCCCACTGCCCAGCGCGGTGTCCGACCCCTGGAAACTGATGCTGCTGGACGCCACTT
TCCGCGGCGCGCAGCAAGTGAGTAACCTGATACATTCCCTGGGACTGAACCACCATCTGATCGC
GCTGAATTTCATCATCACCTCTTTTGGCAAGCAAAGCGCAAGGTCTTCTCCGAAAGTGAAGGTG
ACAGACACCGACTTCGATGGGGTAGAAGTCCGAGTATTTGAAGGTTCTCCGAAACCAGAAGAGC
CGCTGCGACGCAGCGTCATCTATATCCACGGAGGAGGCTGGGCCCTGGCTAGTGCAAAGATCAG
CTACTATGACCAGCTGTGCACAACAATGGCTGAGGAGCTGAACGCCGTCATCGTTTCTATTGAA
TACAGGCTAGTCCCACAGGTCTATTTTCCGGAGCAAATCCATGATGTCATCCGTGCCACTAAAT
ATTTCCTGCAGCCAGAAGTCTTAGACAAGTACAAGGTCGACCCTGGAAGAGTCGGTATTTCTGG
AGACAGTGCTGGTGGGAATCTGGCCGCGGCCCTGGGACAACAGTTTACCTACGTTGCCAGCCTG
AAGAATAAGCTCAAACTGCAGGCTTTGGTCTACCCAGTCCTGCAGGCTTTGGACTTCAACACAC
CCTCTTACCAGCAAAGCATGAACACTCCGATCCTGCCGCGTCATGTCATGGTTAGGTACTGGTT
AGACTACTTCAAGGGCAACTACGACTTTGTAGAGGCCATGATTGTGAACAATCACACTTCACTT
GATGTAGAAAGGGCTGCAGCCCTCAGGGCCCGTCTCGACTGGACATCCCTGTTGCCCTCGTCCA
TCAAAAAGAACTACAAGCCTATCATGCAGACCACAGGGAACGCCAGGATCGTCCAGGAGATCCC
TCAACTGCTGGACGCTGCTGCTTCTCCGCTCATCGCAGAGCAGGAAGTGCTAGAGGCCCTCCCG
AAGACCTACATCCTTACCTGCGAGCACGACGTCCTGCGGGACGATGGGATCATGTACGCCAAGC
GCTTGGAGAGTGCGGGTGTGAACGTGACCTTGGACCACTTTGAGGACGGCTTCCATGGTTGTAT
GATTTTTACAAGCTGGCCGACCAACTTCTCCGTGGGAATCCGGACTAGGAATAGTTACATCAAA
TGGCTGGATCAAAACCTGTGACGGAGGAAACTCCTCAGACGCATGAAGCTCTTGACCTCCGTTT
GCTTTGGAAAAAACAAAACAAAACAAAACAAAACAAAAAACAAAAACACTGCGCATTTCAATCA
TCTGCACCTTTCCCTCGTTTTGCATTAGTACTGAAATCTGTACCCTACAGACCTTATAATAATT
TGCAAAGTGACTCTGACTAACGCGGTTAAGAACATCTGAACTTGGTTTCCCAAATGACTCAGTT
TTTGCTTTCTTTTCTGAAGCCCGAGTGCTAGGTAGGAATGGCCACAGTTTGAAGAGCTAGAAAT
AGCCTTAGGTCGGGCTTCTGTTATGTGCTTTCCAGAAGCAGTTTTTACAACTGTAGGTAAGGTT
GTAAATTCTGAGGAACAACAACACCACCACCACAACCATGAGCCTTTCTTCAGTTTGCTCGGGT
TGACGCGGGCTGCAGAGCAGCGTCTAGTGGACATTCCGAGGCCAGCTCTTGGGACTGTGTAGCC
TCTGCCTCCCAGGATGTTGTCTTTCATGTGGGAATTTTGACAGGATTTCTAGCAAGACAGATTT
CTTCTCGAAAGCTTTTCTTCCTCAGGAGTATGAATTTTCTGAGCTAGCTGCTGTAAATTCAGTG
AGGCTAAAGGGATACTTGAATGTTATTTTTTTTCTCCTAAGAAAATGGGAGGCTACATGCACTG
GATATGTCCTTGGGAAAATCTTTGGGGAACAAACTTATTTAACTGTAGAGTAAGTTTCCTATTA
TGAAATAAGTAAAGGTAGAAAAATAATGGTCTGTTGTTACTTAAGAATACTCCTGGCATAAGTT
ACTAGAAGTGGTGTGTATATATTCGGGGGAGTAAGGAAATAAGTTATGTTTAATAATAGCTTAA
GATGACCAGCAATGCCTGTAGAAGGCTTTGTCCGTTTTTGGCAGAAGGCCTAGGGCATCGAAAA
CTCAGCCTTTTCACTCGTAGCTGAAAATGGGACTATTTTGGTATAGCAGTTGTTTTTTTTTAAG
TTATTTAATGTTAATATATATATATAGCTAAACAGGGTTTTTCTGAAAAACATTATAAAAAATT
TAAGATAAAAGGTATTTTAAAAAGAAAACTACCATAAAGTTATATCCACATGTAATTTTTTTGA
GGAGATCGATAAGAGTAGTAGGCACCACATGTAAGTCAGGGTCAAATACTTGGATATTTATCTG
CATATGCAAATTAAAATAATTAGAAACTTTCTACCTAGTACGTCATGTTGTACTAGGTACATGA
TGCTGGTCAGCCATCCTTAATCCAAAATTTTGAGTCAAGTCTTATAAGTGGAAAATTCCAGTGA
ACATTTATTTTGTATATAAAATTTTAAACCTATTGTGTGAAGCTACCCTCAGGCTATGTAGATC
AGATGTATAAAAAGCACAAATGAATATCTCAATTACATTTGGGTTCCATTCTCAAGATATTTTA
TTATGTATATTCAATTCAAATATTCTAATGTCTAGAAAAATGAAAACCCTGGATATTCTGGTCC
TGAGTTGTTCAGATGAGGGAGAGCCAACCTATAGTTTAACAGCTTAGGTAAGACTCACTCTGCC
CATGCTGGCCAGGGGAACCCTCAGGGGACTCCTCTGGGTGAAGGGCAGATGCTAGCACTGCCTG
TTCTTAGTTCTCCTTCCATTCCTGTCCTGAAGTTCTAACTGCCGAGCCTTACCTTCATAGAAGG
TCTTCACTGCCAGAGTGGGCATCTTGCATAGTAAGGGATTCCAGATTAGATATGAGTTGAGCAC
CCTGCCTTTCTTCCTATCACCCCGCTTCTGCTGATAGTCCGTGCTACATTAAGGGACTGAGCAG
AGAACACTCAGTCAAGTCCTGATCCATTTCGTCATGAAGAGAGCAGGACCTTTCCATTCTATGA
AGGGTGCGTGTTTCTGGTTTCCAGCAGCAGGATAACAAGTGGGAATTTACTCACTGACTTCTCA
TTTATCATAAAAGCTGCAGCACCTTTATGTACAGAACAATGTCACAGTGTGTGTGTGTGTGTGT
GTGTGAGCGAGCATGTGCTGTCTGCATATGGAAATAACTACAGCACAGGCTACCTTGCTGATGT
GTCCATGTCACTGGTCTCCCTTTTAGCTAAAATCTGAGAGTAGAATAACCTGATCTTTGAGGCC
TCTTCCAATGTTAGTCTTTTCTAAGGTAATTTTTAGTAGGTCATAATTCAGTATATACTAGCCT
ACTCATCTCTGAAGACTGACTTTGCTCGTAATTTTTTTTTAATTGGCCACATAGCATTAATGCC
TCCACAGGGTTCCTGTGTTTCACATTTACGATATAAATTGATACCCATCTTCAGCTGAGGTTGT
TATGGGGGGCTGGAATCACGTGTTTTTTAAACCTGATATTTTCATTCCTAATTGAGTGACAGCC
ATCTTTTAAGGTGTTGGGCATGGAACCCCAGGCCTTACCTGCTTGGCAAGTGCTTTACCCCCGA
ACTACACCTGAAGCTCCATTCCTTGTCCCTTCTGCACCATTTAAAGGTGGGAACTATATTTTGA
CTTTATCTACCTCTGAGAAAGAGGAAAATGTAATTATTCACAGAGTTTCTCAAAATGGCATCTT
TCCTCCCAAACTGGGAGCCAAATTCTGCAGAAATCATGGACAGTAAATGGTGACAGATGTCTGA
AGGGGTCTCAAAGATGCAAGGGAACATGGGGTCAAAGGGGCCACCCACCACATCTGATGATATG
TTAGTTTTGTTGTTCTTTGGGGTTTTATTCTTCCAGGTATGTTATGCACTACAGCCTGATCTTT
TCAGTCTAAGACAGCATGGCTTCACTTTCCTGTGTTATGAGAAGGTCACACTTTGGAATACTGA
AGGACAATCCTGAAGTGCTGCAGCGCATAGTGAATGCCTCTTGGTGTTTTCACGTTCGTCTGTG
AGGACTCATAGACTTACAGAATGATGCCGAATGGAATGTTTTGTGCATGACCTTTTAACCTTTG
GCTATTGCCAATTCCCCACTGCAAAGGGGAAGGCAGATTTTATGAAGAGTTTTAGGAATAAATA
CATTTTATAGAATGGAAACCCAGTATGGTACTGGGGAAGTTT

hide sequence

RefSeq Acc Id:

XM_011249684 ⟹ XP_011247986

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	27,272,849 - 27,299,112 (+)	NCBI
GRCm38	3	27,218,700 - 27,245,266 (+)	NCBI

Sequence:

show sequence

AGGGAGTAACCTGATACATTCCCTGGGACTGAACCACCATCTGATCGCGCTGAATTTCATCATC
ACCTCTTTTGGCAAGCAAAGCGCAAGGTCTTCTCCGAAAGTGAAGGTGACAGACACCGACTTCG
ATGGGGTAGAAGTCCGAGTATTTGAAGGTTCTCCGAAACCAGAAGAGCCGCTGCGACGCAGCGT
CATCTATATCCACGGAGGAGGCTGGGCCCTGGCTAGTGCAAAGATCAGCTACTATGACCAGCTG
TGCACAACAATGGCTGAGGAGCTGAACGCCGTCATCGTTTCTATTGAATACAGGCTAGTCCCAC
AGGTCTATTTTCCGGAGCAAATCCATGATGTCATCCGTGCCACTAAATATTTCCTGCAGCCAGA
AGTCTTAGACAAGTACAAGGTCGACCCTGGAAGAGTCGGTATTTCTGGAGACAGTGCTGGTGGG
AATCTGGCCGCGGCCCTGGGACAACAGTTTACCTACGTTGCCAGCCTGAAGAATAAGCTCAAAC
TGCAGGCTTTGGTCTACCCAGTCCTGCAGGCTTTGGACTTCAACACACCCTCTTACCAGCAAAG
CATGAACACTCCGATCCTGCCGCGTCATGTCATGGTTAGGTACTGGTTAGACTACTTCAAGGGC
AACTACGACTTTGTAGAGGCCATGATTGTGAACAATCACACTTCACTTGATGTAGAAAGGGCTG
CAGCCCTCAGGGCCCGTCTCGACTGGACATCCCTGTTGCCCTCGTCCATCAAAAAGAACTACAA
GCCTATCATGCAGACCACAGGGAACGCCAGGATCGTCCAGGAGATCCCTCAACTGCTGGACGCT
GCTGCTTCTCCGCTCATCGCAGAGCAGGAAGTGCTAGAGGCCCTCCCGAAGACCTACATCCTTA
CCTGCGAGCACGACGTCCTGCGGGACGATGGGATCATGTACGCCAAGCGCTTGGAGAGTGCGGG
TGTGAACGTGACCTTGGACCACTTTGAGGACGGCTTCCATGGTTGTATGATTTTTACAAGCTGG
CCGACCAACTTCTCCGTGGGAATCCGGACTAGGAATAGTTACATCAAATGGCTGGATCAAAACC
TGTGACGGAGGAAACTCCTCAGACGCATGAAGCTCTTGACCTCCGTTTGCTTTGGAAAAAACAA
AACAAAACAAAACAAAACAAAAAACAAAAACACTGCGCATTTCAATCATCTGCACCTTTCCCTC
GTTTTGCATTAGTACTGAAATCTGTACCCTACAGACCTTATAATAATTTGCAAAGTGACTCTGA
CTAACGCGGTTAAGAACATCTGAACTTGGTTTCCCAAATGACTCAGTTTTTGCTTTCTTTTCTG
AAGCCCGAGTGCTAGGTAGGAATGGCCACAGTTTGAAGAGCTAGAAATAGCCTTAGGTCGGGCT
TCTGTTATGTGCTTTCCAGAAGCAGTTTTTACAACTGTAGGTAAGGTTGTAAATTCTGAGGAAC
AACAACACCACCACCACAACCATGAGCCTTTCTTCAGTTTGCTCGGGTTGACGCGGGCTGCAGA
GCAGCGTCTAGTGGACATTCCGAGGCCAGCTCTTGGGACTGTGTAGCCTCTGCCTCCCAGGATG
TTGTCTTTCATGTGGGAATTTTGACAGGATTTCTAGCAAGACAGATTTCTTCTCGAAAGCTTTT
CTTCCTCAGGAGTATGAATTTTCTGAGCTAGCTGCTGTAAATTCAGTGAGGCTAAAGGGATACT
TGAATGTTATTTTTTTTCTCCTAAGAAAATGGGAGGCTACATGCACTGGATATGTCCTTGGGAA
AATCTTTGGGGAACAAACTTATTTAACTGTAGAGTAAGTTTCCTATTATGAAATAAGTAAAGGT
AGAAAAATAATGGTCTGTTGTTACTTAAGAATACTCCTGGCATAAGTTACTAGAAGTGGTGTGT
ATATATTCGGGGGAGTAAGGAAATAAGTTATGTTTAATAATAGCTTAAGATGACCAGCAATGCC
TGTAGAAGGCTTTGTCCGTTTTTGGCAGAAGGCCTAGGGCATCGAAAACTCAGCCTTTTCACTC
GTAGCTGAAAATGGGACTATTTTGGTATAGCAGTTGTTTTTTTTTAAGTTATTTAATGTTAATA
TATATATATAGCTAAACAGGGTTTTTCTGAAAAACATTATAAAAAATTTAAGATAAAAGGTATT
TTAAAAAGAAAACTACCATAAAGTTATATCCACATGTAATTTTTTTGAGGAGATCGATAAGAGT
AGTAGGCACCACATGTAAGTCAGGGTCAAATACTTGGATATTTATCTGCATATGCAAATTAAAA
TAATTAGAAACTTTCTACCTAGTACGTCATGTTGTACTAGGTACATGATGCTGGTCAGCCATCC
TTAATCCAAAATTTTGAGTCAAGTCTTATAAGTGGAAAATTCCAGTGAACATTTATTTTGTATA
TAAAATTTTAAACCTATTGTGTGAAGCTACCCTCAGGCTATGTAGATCAGATGTATAAAAAGCA
CAAATGAATATCTCAATTACATTTGGGTTCCATTCTCAAGATATTTTATTATGTATATTCAATT
CAAATATTCTAATGTCTAGAAAAATGAAAACCCTGGATATTCTGGTCCTGAGTTGTTCAGATGA
GGGAGAGCCAACCTATAGTTTAACAGCTTAGGTAAGACTCACTCTGCCCATGCTGGCCAGGGGA
ACCCTCAGGGGACTCCTCTGGGTGAAGGGCAGATGCTAGCACTGCCTGTTCTTAGTTCTCCTTC
CATTCCTGTCCTGAAGTTCTAACTGCCGAGCCTTACCTTCATAGAAGGTCTTCACTGCCAGAGT
GGGCATCTTGCATAGTAAGGGATTCCAGATTAGATATGAGTTGAGCACCCTGCCTTTCTTCCTA
TCACCCCGCTTCTGCTGATAGTCCGTGCTACATTAAGGGACTGAGCAGAGAACACTCAGTCAAG
TCCTGATCCATTTCGTCATGAAGAGAGCAGGACCTTTCCATTCTATGAAGGGTGCGTGTTTCTG
GTTTCCAGCAGCAGGATAACAAGTGGGAATTTACTCACTGACTTCTCATTTATCATAAAAGCTG
CAGCACCTTTATGTACAGAACAATGTCACAGTGTGTGTGTGTGTGTGTGTGTGAGCGAGCATGT
GCTGTCTGCATATGGAAATAACTACAGCACAGGCTACCTTGCTGATGTGTCCATGTCACTGGTC
TCCCTTTTAGCTAAAATCTGAGAGTAGAATAACCTGATCTTTGAGGCCTCTTCCAATGTTAGTC
TTTTCTAAGGTAATTTTTAGTAGGTCATAATTCAGTATATACTAGCCTACTCATCTCTGAAGAC
TGACTTTGCTCGTAATTTTTTTTTAATTGGCCACATAGCATTAATGCCTCCACAGGGTTCCTGT
GTTTCACATTTACGATATAAATTGATACCCATCTTCAGCTGAGGTTGTTATGGGGGGCTGGAAT
CACGTGTTTTTTAAACCTGATATTTTCATTCCTAATTGAGTGACAGCCATCTTTTAAGGTGTTG
GGCATGGAACCCCAGGCCTTACCTGCTTGGCAAGTGCTTTACCCCCGAACTACACCTGAAGCTC
CATTCCTTGTCCCTTCTGCACCATTTAAAGGTGGGAACTATATTTTGACTTTATCTACCTCTGA
GAAAGAGGAAAATGTAATTATTCACAGAGTTTCTCAAAATGGCATCTTTCCTCCCAAACTGGGA
GCCAAATTCTGCAGAAATCATGGACAGTAAATGGTGACAGATGTCTGAAGGGGTCTCAAAGATG
CAAGGGAACATGGGGTCAAAGGGGCCACCCACCACATCTGATGATATGTTAGTTTTGTTGTTCT
TTGGGGTTTTATTCTTCCAGGTATGTTATGCACTACAGCCTGATCTTTTCAGTCTAAGACAGCA
TGGCTTCACTTTCCTGTGTTATGAGAAGGTCACACTTTGGAATACTGAAGGACAATCCTGAAGT
GCTGCAGCGCATAGTGAATGCCTCTTGGTGTTTTCACGTTCGTCTGTGAGGACTCATAGACTTA
CAGAATGATGCCGAATGGAATGTTTTGTGCATGACCTTTTAACCTTTGGCTATTGCCAATTCCC
CACTGCAAAGGGGAAGGCAGATTTTATGAAGAGTTTTAGGAATAAATACATTTTATAGAATGGA
AACCCAGTATGGTACTGGGGAAGTTTATTCATGCTTGCAATCTTGTTTGGAAATAAAATGGGTC
CGTCTGGAAGCATG

hide sequence

Protein Sequences


Protein RefSeqs	NP_848887	(Get FASTA)	NCBI Sequence Viewer
	XP_011247986	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH82569	(Get FASTA)	NCBI Sequence Viewer
	BAC28680	(Get FASTA)	NCBI Sequence Viewer
	BAC30101	(Get FASTA)	NCBI Sequence Viewer
	BAC32327	(Get FASTA)	NCBI Sequence Viewer
	BAD32436	(Get FASTA)	NCBI Sequence Viewer
	BAE22685	(Get FASTA)	NCBI Sequence Viewer
	BAE35340	(Get FASTA)	NCBI Sequence Viewer
	BAE35545	(Get FASTA)	NCBI Sequence Viewer
	EDL34923	(Get FASTA)	NCBI Sequence Viewer
	EDL34924	(Get FASTA)	NCBI Sequence Viewer
	EDL34925	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000045864
	ENSMUSP00000045864.9
GenBank Protein	Q8BLF1	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_848887 ⟸ NM_178772

- UniProtKB:

Q69ZL0 (UniProtKB/Swiss-Prot), Q8BZK3 (UniProtKB/Swiss-Prot), Q8BLF1 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MRSSCVLLAALLALAAYYVYIPLPSAVSDPWKLMLLDATFRGAQQVSNLIHSLGLNHHLIALNF
IITSFGKQSARSSPKVKVTDTDFDGVEVRVFEGSPKPEEPLRRSVIYIHGGGWALASAKISYYD
QLCTTMAEELNAVIVSIEYRLVPQVYFPEQIHDVIRATKYFLQPEVLDKYKVDPGRVGISGDSA
GGNLAAALGQQFTYVASLKNKLKLQALVYPVLQALDFNTPSYQQSMNTPILPRHVMVRYWLDYF
KGNYDFVEAMIVNNHTSLDVERAAALRARLDWTSLLPSSIKKNYKPIMQTTGNARIVQEIPQLL
DAAASPLIAEQEVLEALPKTYILTCEHDVLRDDGIMYAKRLESAGVNVTLDHFEDGFHGCMIFT
SWPTNFSVGIRTRNSYIKWLDQNL

hide sequence

RefSeq Acc Id:

XP_011247986 ⟸ XM_011249684

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAEELNAVIVSIEYRLVPQVYFPEQIHDVIRATKYFLQPEVLDKYKVDPGRVGISGDSAGGNLA
AALGQQFTYVASLKNKLKLQALVYPVLQALDFNTPSYQQSMNTPILPRHVMVRYWLDYFKGNYD
FVEAMIVNNHTSLDVERAAALRARLDWTSLLPSSIKKNYKPIMQTTGNARIVQEIPQLLDAAAS
PLIAEQEVLEALPKTYILTCEHDVLRDDGIMYAKRLESAGVNVTLDHFEDGFHGCMIFTSWPTN
FSVGIRTRNSYIKWLDQNL

hide sequence

Ensembl Acc Id:

ENSMUSP00000045864 ⟸ ENSMUST00000046515

Ensembl Acc Id:

ENSMUSP00000088829 ⟸ ENSMUST00000091284

Ensembl Acc Id:

ENSMUSP00000115209 ⟸ ENSMUST00000138947

Protein Domains

Alpha/beta hydrolase fold-3

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8BLF1-F1-model_v2	AlphaFold	Q8BLF1	1-408	view protein structure

Promoters

RGD ID:

6833263

Promoter ID:

MM_KWN:33909

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

OTTMUST00000069733, OTTMUST00000069734, OTTMUST00000069736, OTTMUST00000069738

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	3	27,081,706 - 27,082,206 (+)	MPROMDB

RGD ID:

6833262

Promoter ID:

MM_KWN:33910

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Kidney, Lung

Transcripts:

OTTMUST00000069735

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	3	27,086,561 - 27,087,652 (+)	MPROMDB

RGD ID:

6880358

Promoter ID:

EPDNEW_M3630

Type:

initiation region

Name:

Nceh1_1

Description:

Mus musculus neutral cholesterol ester hydrolase 1 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	3	27,183,004 - 27,183,064	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2443191	AgrOrtholog
Ensembl Genes	ENSMUSG00000027698	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000046515	ENTREZGENE
	ENSMUST00000046515.15	UniProtKB/Swiss-Prot
Gene3D-CATH	3.40.50.1820	UniProtKB/Swiss-Prot
InterPro	AB_hydrolase	UniProtKB/Swiss-Prot
	AB_hydrolase_3	UniProtKB/Swiss-Prot
	Arylacetamide_deacetylase	UniProtKB/Swiss-Prot
	GDXG_lipolytic_enzyme	UniProtKB/Swiss-Prot
	Lipase_GDXG_put_SER_AS	UniProtKB/Swiss-Prot
KEGG Report	mmu:320024	UniProtKB/Swiss-Prot
MGD	MGI:2443191	ENTREZGENE
NCBI Gene	320024	ENTREZGENE
PANTHER	AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C	UniProtKB/Swiss-Prot
	NEUTRAL CHOLESTEROL ESTER HYDROLASE 1	UniProtKB/Swiss-Prot
Pfam	Abhydrolase_3	UniProtKB/Swiss-Prot
PhenoGen	Nceh1	PhenoGen
PIRSF	Arylacetamide_deacetylase	UniProtKB/Swiss-Prot
PROSITE	LIPASE_GDXG_SER	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF53474	UniProtKB/Swiss-Prot
UniProt	D6RGP7_MOUSE	UniProtKB/TrEMBL
	NCEH1_MOUSE	UniProtKB/Swiss-Prot
	Q3TVS3_MOUSE	UniProtKB/TrEMBL
	Q69ZL0	ENTREZGENE
	Q8BLF1	ENTREZGENE
	Q8BYQ0_MOUSE	UniProtKB/TrEMBL
	Q8BZK3	ENTREZGENE
UniProt Secondary	Q69ZL0	UniProtKB/Swiss-Prot
	Q8BZK3	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-12-25	Nceh1	neutral cholesterol ester hydrolase 1		arylacetamide deacetylase-like 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)

Mammalian Phenotype