Or5an9 (olfactory receptor family 5 subfamily AN member 9)

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Gene: Or5an9 (olfactory receptor family 5 subfamily AN member 9) Mus musculus

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Symbol:

Or5an9

Name:

olfactory receptor family 5 subfamily AN member 9

RGD ID:

1552337

MGI Page

MGI

Description:

Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to be located in membrane. Orthologous to human OR5AN1 (olfactory receptor family 5 subfamily AN member 1).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

GA_x6K02T2RE5P-2573738-2574676; MOR214; MOR214-5; olfactory receptor 1431; olfactory receptor MOR214-5; Olfr1431

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	12,186,932 - 12,187,870 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	12,177,998 - 12,189,555 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	12,209,568 - 12,210,506 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	12,200,634 - 12,212,191 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	12,284,058 - 12,284,996 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	12,276,613 - 12,277,551 (+)	NCBI		MGSCv36	mm8
Celera	19	12,912,320 - 12,913,258 (+)	NCBI		Celera
Cytogenetic Map	19	A	NCBI
cM Map	19	8.67	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

intellectual disability (ISO)

leukocyte adhesion deficiency 3 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (EXP)

bisphenol A (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

titanium dioxide (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

detection of chemical stimulus involved in sensory perception (ISO)

G protein-coupled receptor signaling pathway (ISA)

sensory perception of smell (ISA,ISO)

Cellular Component

membrane (ISA,ISO)

Molecular Function

odorant binding (IBA,ISO)

olfactory receptor activity (IBA,ISA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	MGDs mouse GO annotations	MGD data from the GO Consortium
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:11802173	PMID:11875048	PMID:12477932	PMID:14611657	PMID:21873635	PMID:32295537

Genomics

Comparative Map Data

Or5an9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	12,186,932 - 12,187,870 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	12,177,998 - 12,189,555 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	12,209,568 - 12,210,506 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	12,200,634 - 12,212,191 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	12,284,058 - 12,284,996 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	12,276,613 - 12,277,551 (+)	NCBI		MGSCv36	mm8
Celera	19	12,912,320 - 12,913,258 (+)	NCBI		Celera
Cytogenetic Map	19	A	NCBI
cM Map	19	8.67	NCBI

OR5AN1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	59,358,895 - 59,371,714 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	59,358,895 - 59,371,714 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	59,126,368 - 59,139,187 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	58,888,508 - 58,889,443 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	58,888,507 - 58,889,443	NCBI
Celera	11	56,493,212 - 56,494,147 (+)	NCBI		Celera
Cytogenetic Map	11	q12.1	NCBI
HuRef	11	55,479,692 - 55,480,627 (+)	NCBI		HuRef
CHM1_1	11	58,997,697 - 58,998,632 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	59,309,745 - 59,322,565 (+)	NCBI		T2T-CHM13v2.0

Or5an1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	218,666,274 - 218,667,212 (+)	NCBI		GRCr8
mRatBN7.2	1	209,241,571 - 209,242,510 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	209,241,571 - 209,242,510 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	217,616,220 - 217,617,158 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	224,551,263 - 224,552,201 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	217,370,655 - 217,371,593 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	228,628,274 - 228,629,212 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	228,628,274 - 228,629,212 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	235,788,665 - 235,789,603 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	215,177,170 - 215,178,108 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	215,335,599 - 215,336,538 (+)	NCBI
Celera	1	206,667,720 - 206,668,658 (+)	NCBI		Celera
Cytogenetic Map	1	q43	NCBI

LOC100976396
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	60,482,816 - 60,495,648 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	61,525,129 - 61,537,949 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	54,582,598 - 54,583,622 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	58,034,075 - 58,035,099 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	58,034,116 - 58,035,051 (+)	Ensembl	panpan1.1		panPan2

OR5AN1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	37,329,690 - 37,330,628 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	37,329,690 - 37,330,744 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
ROS_Cfam_1.0	18	37,968,258 - 37,969,196 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	18	37,557,962 - 37,558,900 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	37,135,042 - 37,135,980 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	37,764,171 - 37,765,109 (+)	NCBI		UU_Cfam_GSD_1.0

LOC100516243
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa10.2	2	11,525,200 - 11,526,138 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC101720079
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624864	1,378,172 - 1,390,681 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Or5an9
28 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	66
Count of miRNA genes:	65
Interacting mature miRNAs:	65
Transcripts:	ENSMUST00000072316
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4142302	Nstr1_m	nerve sheath tumor resistance QTL 1 (mouse)			Not determined		19	1	22371338	Mouse
1301271	Datd_m	dopamine transporter density (mouse)			Not determined		19	1	32340234	Mouse
1300923	Bits4_m	bitterness sensitivity 4 (mouse)			Not determined		19	3323216	37323348	Mouse
11039522	Tbbr4_m	Trypanosoma brucei brucei response 4 (mouse)					19	5313326	39313470	Mouse
4142161	Drinksac2_m	drink saccharin 2 (mouse)			Not determined			1	20695286	Mouse
1357819	Tgct2_m	testicular germ cell tumor 2 (mouse)			Not determined		19	3328551	20539663	Mouse
1302019	Pgia23_m	proteoglycan induced arthritis 23 (mouse)			Not determined		19	9787453	43787602	Mouse
14928311	Manh85_m	mandible shape 85 (mouse)					19	11914789	45914789	Mouse
38455997	Cdtm2_m	CD62L+ CD8 TM cells 2 (mouse)					19	9977364	19977364	Mouse
4142406	Pbctlp1_m	peripheral blood cytotoxic T lymphocyte percentage 1 (mouse)			Not determined			1	32875174	Mouse
1300776	Lfp3_m	long free running period 3 (mouse)			Not determined		19	1	20328703	Mouse
1300904	Chab5_m	cholesterol absorption 5 (mouse)			Not determined		19	1653764	35653927	Mouse
26884385	Skwq14_m	skull length QTL 14, 16 week (mouse)					19	3250000	35877400	Mouse
1301800	Faq10_m	fluctuating asymmetry QTL 10 (mouse)			Not determined		19	3323216	37323348	Mouse
1300591	Pas3_m	pulmonary adenoma susceptibility 3 (mouse)			Not determined		19	3323216	37323348	Mouse
1302126	Skull26_m	skull morphology 26 (mouse)			Not determined		19	3323216	37323348	Mouse
1301228	Iba4_m	induction of brown adipocytes 4 (mouse)			Not determined		19	9305715	43305821	Mouse

Markers in Region

UniSTS:491630

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	19	12,209,512 - 12,210,581	UniSTS	GRCm38
MGSCv37	19	12,284,002 - 12,285,071	UniSTS	GRCm37
Celera	19	12,912,264 - 12,913,333	UniSTS
Cytogenetic Map	19	C1	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_146414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC131724	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY073681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY318650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC133710	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KP290760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000072316 ⟹ ENSMUSP00000072158

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	19	12,186,932 - 12,187,870 (+)	Ensembl
GRCm38.p6 Ensembl	19	12,209,568 - 12,210,506 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000213759 ⟹ ENSMUSP00000150967

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	19	12,177,998 - 12,189,555 (+)	Ensembl
GRCm38.p6 Ensembl	19	12,200,634 - 12,212,191 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000214138

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	19	12,178,169 - 12,189,555 (+)	Ensembl
GRCm38.p6 Ensembl	19	12,200,805 - 12,212,191 (+)	Ensembl

RefSeq Acc Id:

NM_146414 ⟹ NP_666526

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	19	12,186,932 - 12,187,870 (+)	NCBI
GRCm38	19	12,209,568 - 12,210,506 (+)	ENTREZGENE
MGSCv37	19	12,284,058 - 12,284,996 (+)	RGD
Celera	19	12,912,320 - 12,913,258 (+)	RGD
cM Map	19		ENTREZGENE

Sequence:

show sequence

ATGATTGGGGAAAGAAATATTACCACAATAACCCAGTTCATCCTCCTGGGATTTTCAGATTTCC
CTAGAATCACAGTTCTGCTTTTTGTCATATTTTTGATGATCTACATTATGACTATGACCTGGAA
CTTGTCCCTTATTGCTTTAATAAGAATGGATTCCCACCTTCACACACCCATGTATTTCTTCCTC
AGTAATCTCTCCTTTATAGACCTCTGCTTTGTTACTTCCACAGCCCCCAAGATGCTTTCCAACT
TCTTCCAGGAAAACCAAACTATCAGCTTTGTGGGCTGCATAGTTCAATACTTTATCCTTTCCAC
TATGGGGCTGACTGAATGTTGCCTCATGACAGCCATGGCCTATGACAGGTATGCTGCCATTTGT
AACCCTCTTCTGTACTCATCAGTCATGTCACCCACACTATGTGCTCAGATGGTGATGGGAAGCT
ACACAGCAGGACTCACAGGCTCTGTATCTCAGATATGTGCCTTGCTGCAGCTCTATTTCTGTGG
CCCTAATGTCATTAGGCATTTCTTCTGTGACATATCTCAGCTATTAAATCTATCCTGTAGTGAT
GCTTTCTTTGTACAGGTCCTTCTTGCTATATTAACCATGTGTTTTGGAATAGCAAATGCCTTAG
CCACCATGCTGTCCTATGGTTTCATCGTCCTGTCCATCTTAAAGATCACTTCAGCTAAAGGCAG
GTCCAAGGCCTTCAACACCTGTGCTTCTCACCTGACAGCTGTTTCTCTCTTCTATAGTACTGGC
ATCTTTGTCTATTTGCGATCCAGCTCTGGTAGCTCCTCCAGTTTTGACAGATTCACATCTGTCT
TCTACACTGTGGTGATTCCCATGTTGAACCCTTTGATATATAGTCTGAGAAACAAGGAAATCAA
AGATGCCATGAAGCGGTTGCAGAAAAAGAAAATCTGCAACTAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_666526	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI33711	(Get FASTA)	NCBI Sequence Viewer
	AAL61344	(Get FASTA)	NCBI Sequence Viewer
	AAP71806	(Get FASTA)	NCBI Sequence Viewer
	ALI87918	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000072158
	ENSMUSP00000072158.5
	ENSMUSP00000150967.2

RefSeq Acc Id:

NP_666526 ⟸ NM_146414

- UniProtKB:

Q8VF59 (UniProtKB/TrEMBL), Q8VFV6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MIGERNITTITQFILLGFSDFPRITVLLFVIFLMIYIMTMTWNLSLIALIRMDSHLHTPMYFFL
SNLSFIDLCFVTSTAPKMLSNFFQENQTISFVGCIVQYFILSTMGLTECCLMTAMAYDRYAAIC
NPLLYSSVMSPTLCAQMVMGSYTAGLTGSVSQICALLQLYFCGPNVIRHFFCDISQLLNLSCSD
AFFVQVLLAILTMCFGIANALATMLSYGFIVLSILKITSAKGRSKAFNTCASHLTAVSLFYSTG
IFVYLRSSSGSSSSFDRFTSVFYTVVIPMLNPLIYSLRNKEIKDAMKRLQKKKICN

hide sequence

Ensembl Acc Id:

ENSMUSP00000072158 ⟸ ENSMUST00000072316

Ensembl Acc Id:

ENSMUSP00000150967 ⟸ ENSMUST00000213759

Protein Domains

G-protein coupled receptors family 1 profile

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8VF59-F1-model_v2	AlphaFold	Q8VF59	1-312	view protein structure

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:3031265	AgrOrtholog
Ensembl Genes	ENSMUSG00000058641
	ENSMUSG00000094133	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000072316	ENTREZGENE
	ENSMUST00000072316.5	UniProtKB/TrEMBL
	ENSMUST00000213759.2	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	7TM_GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_supfam	UniProtKB/TrEMBL
	Olfact_rcpt	UniProtKB/TrEMBL
	Olfactory_GPCR	UniProtKB/TrEMBL
KEGG Report	mmu:258409	UniProtKB/TrEMBL
MGD	MGI:3031265	ENTREZGENE
NCBI Gene	258409	ENTREZGENE
PANTHER	OLFACTORY RECEPTOR	UniProtKB/TrEMBL
	OLFACTORY RECEPTOR	UniProtKB/TrEMBL
Pfam	7tm_4	UniProtKB/TrEMBL
PhenoGen	Or5an9	PhenoGen
PRINTS	GPCRRHODOPSN	UniProtKB/TrEMBL
	OLFACTORYR	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	Q8VF59	ENTREZGENE, UniProtKB/TrEMBL
	Q8VFV6	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-05-24	Or5an9	olfactory receptor family 5 subfamily AN member 9	Olfr1431	olfactory receptor 1431	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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