Phkb (phosphorylase kinase beta) - Rat Genome Database

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Gene: Phkb (phosphorylase kinase beta) Mus musculus
Analyze
Symbol: Phkb
Name: phosphorylase kinase beta
RGD ID: 1552167
MGI Page MGI
Description: Predicted to enable calmodulin binding activity. Predicted to be involved in protein phosphorylation. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in plasma membrane. Predicted to be part of phosphorylase kinase complex. Is expressed in colon; hindgut; and primitive hindgut. Human ortholog(s) of this gene implicated in glycogen storage disease IXb. Orthologous to human PHKB (phosphorylase kinase regulatory subunit beta).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI463271; MGC62514; phosphorylase b kinase regulatory subunit beta; phosphorylase kinase subunit beta
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39886,567,489 - 86,790,883 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl886,567,588 - 86,788,005 (+)EnsemblGRCm39 Ensembl
GRCm38885,840,853 - 86,064,251 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl885,840,959 - 86,061,376 (+)EnsemblGRCm38mm10GRCm38
MGSCv37888,364,901 - 88,584,541 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36888,731,107 - 88,950,747 (+)NCBIMGSCv36mm8
Celera890,138,260 - 90,352,039 (+)NCBICelera
Cytogenetic Map8C3NCBI
cM Map841.61NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phosphorylase kinase: the complexity of its regulation is reflected in the complexity of its structure. Brushia RJ and Walsh DA, Front Biosci. 1999 Sep 15;4:D618-41.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:1874721   PMID:3472241   PMID:9060410   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12520002   PMID:14610273   PMID:15489334  
PMID:15741177   PMID:16141072   PMID:16141073   PMID:16512683   PMID:17967808   PMID:18549242   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22665494   PMID:24200680  
PMID:27215380   PMID:27899360   PMID:29093530   PMID:30333137   PMID:31040226   PMID:31524221   PMID:32325033   PMID:36077341  


Genomics

Comparative Map Data
Phkb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39886,567,489 - 86,790,883 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl886,567,588 - 86,788,005 (+)EnsemblGRCm39 Ensembl
GRCm38885,840,853 - 86,064,251 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl885,840,959 - 86,061,376 (+)EnsemblGRCm38mm10GRCm38
MGSCv37888,364,901 - 88,584,541 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36888,731,107 - 88,950,747 (+)NCBIMGSCv36mm8
Celera890,138,260 - 90,352,039 (+)NCBICelera
Cytogenetic Map8C3NCBI
cM Map841.61NCBI
PHKB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381647,461,299 - 47,701,523 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1647,461,123 - 47,701,523 (+)EnsemblGRCh38hg38GRCh38
GRCh371647,495,210 - 47,735,434 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361646,052,739 - 46,291,755 (+)NCBINCBI36Build 36hg18NCBI36
Build 341646,052,738 - 46,291,755NCBI
Celera1632,003,151 - 32,243,373 (+)NCBICelera
Cytogenetic Map16q12.1NCBI
HuRef1633,385,772 - 33,625,996 (+)NCBIHuRef
CHM1_11648,902,240 - 49,142,934 (+)NCBICHM1_1
T2T-CHM13v2.01653,258,117 - 53,498,326 (+)NCBIT2T-CHM13v2.0
Phkb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21921,013,719 - 21,210,672 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1921,025,733 - 21,210,633 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1922,713,124 - 22,893,420 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01927,907,652 - 28,087,942 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01930,870,462 - 31,050,747 (-)NCBIRnor_WKY
Rnor_6.01922,031,684 - 22,281,788 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1922,033,228 - 22,281,778 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01933,031,043 - 33,289,256 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41922,373,355 - 22,561,509 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11922,378,643 - 22,380,741 (-)NCBI
Celera1920,893,425 - 21,075,361 (-)NCBICelera
Cytogenetic Map19p11NCBI
Phkb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554747,598,463 - 7,801,083 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554747,599,657 - 7,801,083 (-)NCBIChiLan1.0ChiLan1.0
PHKB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan11662,819,336 - 63,059,963 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01627,720,300 - 27,960,740 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11646,612,062 - 46,853,157 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1646,612,053 - 46,853,157 (+)Ensemblpanpan1.1panPan2
PHKB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1267,260,532 - 67,476,596 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl267,254,542 - 67,476,532 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha263,836,201 - 64,052,047 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0267,818,656 - 68,034,694 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl267,818,659 - 68,034,650 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1264,631,779 - 64,847,974 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0265,655,460 - 65,871,221 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0266,543,573 - 66,759,826 (-)NCBIUU_Cfam_GSD_1.0
Phkb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934958,586,224 - 58,809,915 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936475779,302 - 1,003,262 (+)EnsemblSpeTri2.0
SpeTri2.0NW_004936475779,238 - 1,002,851 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PHKB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl636,991,274 - 37,193,593 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1636,994,424 - 37,193,631 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2632,141,368 - 32,246,744 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PHKB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1533,288,396 - 33,512,445 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl533,291,009 - 33,513,244 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604743,031,736 - 43,259,030 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Phkb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249141,013,145 - 1,234,610 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249141,013,828 - 1,235,023 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Phkb
7163 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1525
Count of miRNA genes:761
Interacting mature miRNAs:973
Transcripts:ENSMUST00000053771, ENSMUST00000159716, ENSMUST00000159882, ENSMUST00000160611, ENSMUST00000160731, ENSMUST00000161850, ENSMUST00000162305, ENSMUST00000162464, ENSMUST00000162981
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)84016229795416226Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85474046188740637Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85515925889159407Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85629887290298872Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85892810792928107Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85913640493136404Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86151347995513605Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6418673698186736Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86466617698666325Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined866084397100084549Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined866326836100326976Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined871032003105032123Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined871032003105032123Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7158942790929226Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871740461124622354Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71740461124622354Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871829531105829637Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined872122809106123021Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873929123107929226Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)874126628126826739Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined876402145110402251Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined876411976110412125Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined876411976110412125Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined876411976110412125Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined879245241113245331Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879808806113809031Mouse
12904012Cfq10_mconditioned fear QTL 10 (mouse)88079340489740987Mouse
10755530Wbc2_mwhite blood cell count 2 (mouse)881819296115819296Mouse
10755519Wbc1_mwhite blood cell count 1 (mouse)882345783116345783Mouse
1301766Desp1_mdespair 1 (mouse)Not determined885486208119486373Mouse
1302049Heal1_mwound healing/regeneration 1 (mouse)Not determined886443553120443701Mouse
1301253Skmw2_mskeletal muscle weight 2 (mouse)Not determined886443553120443701Mouse
10045619Heal14_mwound healing/regeneration 14 (mouse)Not determined886443553120443701Mouse

Markers in Region
AI463271  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38886,060,410 - 86,060,567UniSTSGRCm38
MGSCv37888,584,309 - 88,584,466UniSTSGRCm37
Celera890,351,807 - 90,351,964UniSTS
Cytogenetic Map8C3UniSTS
cM Map838.6UniSTS
Whitehead/MRC_RH81025.51UniSTS
RH125742  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38885,850,759 - 85,851,007UniSTSGRCm38
MGSCv37888,374,658 - 88,374,906UniSTSGRCm37
Celera890,148,015 - 90,148,263UniSTS
Cytogenetic Map8C3UniSTS
cM Map838.6UniSTS
Whitehead/MRC_RH81018.05UniSTS
UniSTS:235956  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38885,964,452 - 85,964,531UniSTSGRCm38
MGSCv37888,488,351 - 88,488,430UniSTSGRCm37
Celera890,255,019 - 90,255,098UniSTS
Cytogenetic Map8B1.3UniSTS
Cytogenetic Map8C3UniSTS
cM Map838.6UniSTS
UniSTS:235958  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38886,059,800 - 86,060,102UniSTSGRCm38
MGSCv37888,583,699 - 88,584,001UniSTSGRCm37
Celera890,351,197 - 90,351,499UniSTS
Cytogenetic Map8C3UniSTS
cM Map838.6UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001364411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_199446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_175780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001778385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001778386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_878767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC116323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC117185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC122830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK089493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KY468199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000053771   ⟹   ENSMUSP00000050788
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl886,567,631 - 86,788,005 (+)Ensembl
GRCm38.p6 Ensembl885,841,002 - 86,061,376 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159716
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl886,567,588 - 86,606,354 (+)Ensembl
GRCm38.p6 Ensembl885,840,959 - 85,879,725 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159882
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl886,567,637 - 86,649,045 (+)Ensembl
GRCm38.p6 Ensembl885,841,008 - 85,922,416 (+)Ensembl
RefSeq Acc Id: ENSMUST00000160611   ⟹   ENSMUSP00000125690
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl886,567,620 - 86,663,675 (+)Ensembl
GRCm38.p6 Ensembl885,840,991 - 85,937,046 (+)Ensembl
RefSeq Acc Id: ENSMUST00000160731   ⟹   ENSMUSP00000125051
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl886,744,061 - 86,757,020 (+)Ensembl
GRCm38.p6 Ensembl886,017,432 - 86,030,391 (+)Ensembl
RefSeq Acc Id: ENSMUST00000161850   ⟹   ENSMUSP00000124939
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl886,567,645 - 86,648,779 (+)Ensembl
GRCm38.p6 Ensembl885,841,016 - 85,922,150 (+)Ensembl
RefSeq Acc Id: ENSMUST00000162305
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl886,762,275 - 86,787,270 (+)Ensembl
GRCm38.p6 Ensembl886,035,646 - 86,060,641 (+)Ensembl
RefSeq Acc Id: ENSMUST00000162464   ⟹   ENSMUSP00000125197
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl886,569,416 - 86,623,166 (+)Ensembl
GRCm38.p6 Ensembl885,842,787 - 85,896,537 (+)Ensembl
RefSeq Acc Id: ENSMUST00000162981   ⟹   ENSMUSP00000124522
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl886,569,680 - 86,606,441 (+)Ensembl
GRCm38.p6 Ensembl885,843,051 - 85,879,812 (+)Ensembl
RefSeq Acc Id: NM_001364411   ⟹   NP_001351340
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,617 - 86,790,883 (+)NCBI
GRCm38885,840,988 - 86,060,642 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001364412   ⟹   NP_001351341
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,617 - 86,790,883 (+)NCBI
GRCm38885,840,988 - 86,060,642 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001403917   ⟹   NP_001390846
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,617 - 86,790,883 (+)NCBI
RefSeq Acc Id: NM_001403918   ⟹   NP_001390847
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,617 - 86,790,883 (+)NCBI
RefSeq Acc Id: NM_001403919   ⟹   NP_001390848
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,617 - 86,790,883 (+)NCBI
RefSeq Acc Id: NM_001403920   ⟹   NP_001390849
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,617 - 86,790,883 (+)NCBI
RefSeq Acc Id: NM_001403921   ⟹   NP_001390850
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,617 - 86,790,883 (+)NCBI
RefSeq Acc Id: NM_199446   ⟹   NP_955517
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,617 - 86,790,883 (+)NCBI
GRCm38885,840,988 - 86,060,642 (+)NCBI
MGSCv37888,364,901 - 88,584,541 (+)RGD
Celera890,138,260 - 90,352,039 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_175780
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,617 - 86,790,883 (+)NCBI
RefSeq Acc Id: XM_006530533   ⟹   XP_006530596
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,495 - 86,790,880 (+)NCBI
GRCm38885,840,859 - 86,064,251 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530537   ⟹   XP_006530600
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,649,884 - 86,790,880 (+)NCBI
GRCm38885,922,872 - 86,064,251 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036153698   ⟹   XP_036009591
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,591 - 86,790,880 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001778385
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,489 - 86,790,880 (+)NCBI
GRCm38885,840,853 - 86,064,251 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001778386
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,591 - 86,790,880 (+)NCBI
GRCm38885,840,962 - 86,064,251 (+)NCBI
Sequence:
RefSeq Acc Id: XR_878767
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39886,567,495 - 86,790,880 (+)NCBI
GRCm38885,840,858 - 86,064,251 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_955517   ⟸   NM_199446
- Peptide Label: isoform 1
- UniProtKB: Q7TSH2 (UniProtKB/Swiss-Prot),   A0A8C6H742 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530596   ⟸   XM_006530533
- Peptide Label: isoform X2
- UniProtKB: Q7TSH2 (UniProtKB/Swiss-Prot),   A0A8C6H742 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530600   ⟸   XM_006530537
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: NP_001351340   ⟸   NM_001364411
- Peptide Label: isoform 2
- UniProtKB: A0A8C6H7F0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001351341   ⟸   NM_001364412
- Peptide Label: isoform 3
- UniProtKB: A0A8C6H7N6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000050788   ⟸   ENSMUST00000053771
RefSeq Acc Id: ENSMUSP00000125690   ⟸   ENSMUST00000160611
RefSeq Acc Id: ENSMUSP00000125051   ⟸   ENSMUST00000160731
RefSeq Acc Id: ENSMUSP00000124522   ⟸   ENSMUST00000162981
RefSeq Acc Id: ENSMUSP00000125197   ⟸   ENSMUST00000162464
RefSeq Acc Id: ENSMUSP00000124939   ⟸   ENSMUST00000161850
RefSeq Acc Id: XP_036009591   ⟸   XM_036153698
- Peptide Label: isoform X3
- UniProtKB: A0A8C6H790 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001390849   ⟸   NM_001403920
- Peptide Label: isoform 2
- UniProtKB: A0A8C6H7F0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001390848   ⟸   NM_001403919
- Peptide Label: isoform 2
- UniProtKB: A0A8C6H7F0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001390847   ⟸   NM_001403918
- Peptide Label: isoform 1
- UniProtKB: Q7TSH2 (UniProtKB/Swiss-Prot),   A0A8C6H742 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001390850   ⟸   NM_001403921
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001390846   ⟸   NM_001403917
- Peptide Label: isoform 1
- UniProtKB: Q7TSH2 (UniProtKB/Swiss-Prot),   A0A8C6H742 (UniProtKB/TrEMBL)
Protein Domains
GH15-like   Phosphorylase b kinase regulatory subunit alpha/beta

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TSH2-F1-model_v2 AlphaFold Q7TSH2 1-1085 view protein structure

Promoters
RGD ID:8667777
Promoter ID:EPDNEW_M11920
Type:initiation region
Name:Phkb_1
Description:Mus musculus phosphorylase kinase beta , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38885,841,020 - 85,841,080EPDNEW
RGD ID:6843344
Promoter ID:MM_KWN:55161
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000061385,   NM_028007,   OTTMUST00000077272,   OTTMUST00000077274,   OTTMUST00000077277,   OTTMUST00000081079,   UC009MQI.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36888,363,956 - 88,365,382 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97578 AgrOrtholog
Ensembl Genes ENSMUSG00000036879 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000050788 ENTREZGENE
  ENSMUSP00000050788.8 UniProtKB/Swiss-Prot
  ENSMUSP00000124522.2 UniProtKB/TrEMBL
  ENSMUSP00000124939.2 UniProtKB/TrEMBL
  ENSMUSP00000125051.2 UniProtKB/TrEMBL
  ENSMUSP00000125197.2 UniProtKB/TrEMBL
  ENSMUSP00000125690.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000053771 ENTREZGENE
  ENSMUST00000053771.14 UniProtKB/Swiss-Prot
  ENSMUST00000160611.8 UniProtKB/TrEMBL
  ENSMUST00000160731.2 UniProtKB/TrEMBL
  ENSMUST00000161850.8 UniProtKB/TrEMBL
  ENSMUST00000162464.3 UniProtKB/TrEMBL
  ENSMUST00000162981.2 UniProtKB/TrEMBL
InterPro 6-hairpin_glycosidase_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GH15-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KPBA/B_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PHK_A/B_su UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:102093 UniProtKB/Swiss-Prot
MGD MGI:97578 ENTREZGENE
NCBI Gene 102093 ENTREZGENE
PANTHER PHOSPHORYLASE B KINASE REGULATORY SUBUNIT BETA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10749 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Glyco_hydro_15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KPBB_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Phkb PhenoGen
Superfamily-SCOP SSF48208 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8C6H742 ENTREZGENE
  A0A8C6H790 ENTREZGENE
  A0A8C6H7F0 ENTREZGENE
  A0A8C6H7N6 ENTREZGENE
  E0CX43_MOUSE UniProtKB/TrEMBL
  E0CXM1_MOUSE UniProtKB/TrEMBL
  E0CY30_MOUSE UniProtKB/TrEMBL
  E0CZ55_MOUSE UniProtKB/TrEMBL
  F7DF70_MOUSE UniProtKB/TrEMBL
  KPBB_MOUSE UniProtKB/Swiss-Prot
  Q3TMP9_MOUSE UniProtKB/TrEMBL
  Q3U6H6_MOUSE UniProtKB/TrEMBL
  Q3UV76_MOUSE UniProtKB/TrEMBL
  Q7TSH2 ENTREZGENE
  Q80WB7_MOUSE UniProtKB/TrEMBL