Dlst (dihydrolipoamide S-succinyltransferase) - Rat Genome Database

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Gene: Dlst (dihydrolipoamide S-succinyltransferase) Mus musculus
Analyze
Symbol: Dlst
Name: dihydrolipoamide S-succinyltransferase
RGD ID: 1551842
MGI Page MGI
Description: Predicted to enable dihydrolipoyllysine-residue succinyltransferase activity; heat shock protein binding activity; and protein-folding chaperone binding activity. Predicted to be involved in 2-oxoglutarate metabolic process; nucleoside phosphate metabolic process; and tricarboxylic acid cycle. Located in mitochondrion and myelin sheath. Part of oxoglutarate dehydrogenase complex. Is expressed in several structures, including alimentary system; metanephros; nervous system; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in Alzheimer's disease and paraganglioma. Orthologous to human DLST (dihydrolipoamide S-succinyltransferase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1600017E01Rik; 2-oxoglutarate dehydrogenase complex component E2; 4632413C10Rik; 4930529O08Rik; dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex); dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial; DLTS; E2K; OGDC-E2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391285,157,597 - 85,180,865 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1285,157,607 - 85,181,619 (+)EnsemblGRCm39 Ensembl
GRCm381285,110,822 - 85,134,091 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1285,110,833 - 85,134,845 (+)EnsemblGRCm38mm10GRCm38
MGSCv371286,451,783 - 86,475,041 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361285,999,999 - 86,023,189 (+)NCBIMGSCv36mm8
Celera1286,568,081 - 86,591,232 (+)NCBICelera
Cytogenetic Map12D1NCBI
cM Map1239.55NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-dexrazoxane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2,2-tetramine  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,4,6-tribromophenol  (ISO)
2,4,6-trinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-methylcholine  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-methyl-4-oxido-2-pyrazin-4-iumcarboxylic acid  (ISO)
6-propyl-2-thiouracil  (ISO)
acetylsalicylic acid  (ISO)
all-trans-retinoic acid  (ISO)
allethrin  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
Aroclor 1254  (EXP)
arsenite(3-)  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
butanal  (ISO)
cannabidiol  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
clofibrate  (EXP,ISO)
clozapine  (ISO)
Cuprizon  (ISO)
cyhalothrin  (ISO)
cypermethrin  (ISO)
decabromodiphenyl ether  (ISO)
doxorubicin  (EXP)
ethanol  (EXP,ISO)
fenthion  (EXP)
fenvalerate  (ISO)
flutamide  (ISO)
gentamycin  (ISO)
hypochlorous acid  (EXP)
isotretinoin  (ISO)
ivermectin  (ISO)
lamivudine  (EXP)
lovastatin  (EXP)
maneb  (EXP)
methamphetamine  (ISO)
methidathion  (EXP)
methimazole  (ISO)
minocycline  (EXP)
oxybenzone  (ISO)
ozone  (ISO)
paraquat  (EXP)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (EXP,ISO)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
pyrethrins  (ISO)
resveratrol  (EXP)
sarin  (ISO)
sodium arsenite  (ISO)
streptozocin  (ISO)
sulfadimethoxine  (ISO)
thapsigargin  (ISO)
thiram  (ISO)
triphenyl phosphate  (ISO)
trovafloxacin  (ISO)
tunicamycin  (EXP)
valproic acid  (EXP,ISO)
vitamin E  (ISO)
warfarin  (EXP)
zidovudine  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. The alpha-ketoglutarate dehydrogenase complex. Sheu KF and Blass JP, Ann N Y Acad Sci. 1999;893:61-78.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12904583   PMID:14610273   PMID:14681479   PMID:15489334   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:17500595   PMID:17626619   PMID:17634366   PMID:18614015   PMID:19596066   PMID:19660549   PMID:21267068   PMID:21374701   PMID:21677750   PMID:21873635  
PMID:22169199   PMID:22496890   PMID:23475850   PMID:25706746   PMID:26465331   PMID:27113764   PMID:27215380   PMID:28130547   PMID:28245920   PMID:28369354   PMID:28378742   PMID:28611091  
PMID:29128334   PMID:29199018   PMID:29222160   PMID:30457570   PMID:30550785   PMID:31042466   PMID:32325033   PMID:33601422   PMID:36417873   PMID:37142655   PMID:37442135   PMID:38355793  
PMID:38418556  


Genomics

Comparative Map Data
Dlst
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391285,157,597 - 85,180,865 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1285,157,607 - 85,181,619 (+)EnsemblGRCm39 Ensembl
GRCm381285,110,822 - 85,134,091 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1285,110,833 - 85,134,845 (+)EnsemblGRCm38mm10GRCm38
MGSCv371286,451,783 - 86,475,041 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361285,999,999 - 86,023,189 (+)NCBIMGSCv36mm8
Celera1286,568,081 - 86,591,232 (+)NCBICelera
Cytogenetic Map12D1NCBI
cM Map1239.55NCBI
DLST
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381474,881,916 - 74,903,743 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1474,881,891 - 74,903,743 (+)EnsemblGRCh38hg38GRCh38
GRCh371475,348,619 - 75,370,446 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361474,418,372 - 74,440,199 (+)NCBINCBI36Build 36hg18NCBI36
Build 341474,418,371 - 74,440,196NCBI
Celera1455,386,967 - 55,408,821 (+)NCBICelera
Cytogenetic Map14q24.3NCBI
HuRef1455,516,596 - 55,538,452 (+)NCBIHuRef
CHM1_11475,287,750 - 75,309,620 (+)NCBICHM1_1
T2T-CHM13v2.01469,091,016 - 69,112,843 (+)NCBIT2T-CHM13v2.0
Dlst
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86110,489,576 - 110,512,841 (+)NCBIGRCr8
mRatBN7.26104,758,511 - 104,783,296 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6104,758,631 - 104,783,296 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6104,927,983 - 104,951,140 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06105,227,149 - 105,250,302 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06104,596,515 - 104,619,669 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06108,936,534 - 108,961,322 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6108,936,664 - 108,959,803 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06116,595,654 - 116,620,427 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46109,156,751 - 109,180,537 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16109,160,220 - 109,183,992 (+)NCBI
Celera6102,581,378 - 102,605,253 (+)NCBICelera
Cytogenetic Map6q31NCBI
Dlst
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955523661,738 - 680,802 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955523660,413 - 680,878 (-)NCBIChiLan1.0ChiLan1.0
DLST
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21575,963,959 - 75,986,536 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11475,180,451 - 75,205,720 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01455,433,358 - 55,455,876 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11474,278,128 - 74,300,133 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1474,278,128 - 74,300,133 (+)Ensemblpanpan1.1panPan2
DLST
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1848,003,730 - 48,025,001 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl848,002,211 - 48,024,999 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha847,687,937 - 47,709,198 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0848,231,361 - 48,252,635 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl848,230,731 - 48,252,633 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1847,902,283 - 47,923,535 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0847,923,602 - 47,944,852 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0848,321,863 - 48,343,131 (+)NCBIUU_Cfam_GSD_1.0
Dlst
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864028,007,904 - 28,030,206 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364884,038,985 - 4,061,087 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364884,038,985 - 4,061,071 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DLST
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl798,091,124 - 98,111,572 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1798,091,161 - 98,111,267 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27103,935,074 - 103,955,180 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DLST
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12452,098,270 - 52,121,560 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2452,098,349 - 52,120,121 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605340,330,079 - 40,352,940 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dlst
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473426,803,344 - 26,825,272 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473426,802,902 - 26,824,632 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dlst
610 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:554
Count of miRNA genes:369
Interacting mature miRNAs:442
Transcripts:ENSMUST00000053811
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
39128213Lwq23_mliver weight QTL 10 (mouse)1280956708113383533Mouse
14746976Manh73_mmandible shape 73 (mouse)126585713199857131Mouse
27226776Tibl6_mtibia length 6, 5 week (mouse)126064678692666774Mouse
1301337Cdcs8_mcytokine deficiency colitis susceptibility 8 (mouse)Not determined126468908398689229Mouse
1300633Cdcs7_mcytokine deficiency colitis susceptibility 7 (mouse)Not determined126468908398689229Mouse
25823169Hrsq8_mhost response to SARS QTL 8, log titer (mouse)1281696245108495368Mouse
27226771Tibl14_mtibia length 14, 10 week (mouse)126834677498766259Mouse
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse
4141738Tgq23_mtriglyceride QTL 23 (mouse)Not determined72112877106112877Mouse
4141610Tailaq1_mtail length adjusted QTL 1 (mouse)Not determined80956708113383533Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
13524846Ppiq11_mprepulse inhibition QTL 11 (mouse)1282666396116666396Mouse
1357749Vtbt13_mvertebral trabecular bone trait 13 (mouse)Not determined125313200287132145Mouse
13524842Ppiq10a_mprepulse inhibition QTL 10a (mouse)1277512220111512220Mouse
1301879Insq10_minsulin QTL 10 (mouse)Not determined1283532075117532224Mouse
1301046Par3_mpulmonary adenoma resistance 3 (mouse)Not determined126395670897956883Mouse
1301492Dbsty3_mdiabesity 3 (mouse)Not determined1283532075117532224Mouse
4141335W6q10_mweight 6 weeks QTL 10 (mouse)Not determined80956708113383533Mouse
1357757Lnopy2_mlens opacity 2 (mouse)Not determined125284662686846796Mouse
1301689Skull18_mskull morphology 18 (mouse)Not determined1273887422107887526Mouse
10043895Bw20_mbody weight QTL 20 (mouse)Not determined126230825296308252Mouse
27226797Scvln19_msacral vertebrae length 2, 16 week (mouse)126214678699466259Mouse
1357479Splwt1_mspleen weight 1 (mouse)Not determined124169317590887526Mouse
10043948Pbft6_mpercent body fat 6 (mouse)Not determined126120542795205427Mouse
1301926Adip6_madiposity 6 (mouse)Not determined1273887422107887526Mouse
27226793Feml10_mfemur length 10, 5 week (mouse)1268346774113363620Mouse
27226728Tibl20_mtibia length 20, 16 week (mouse)125914678693866774Mouse
1301476Pbwg12_mpostnatal body weight growth 12 (mouse)Not determined126204016496040364Mouse
4142401Egq10_mearly growth QTL 10 (mouse)Not determined80956708113383533Mouse
13524849Ppiq11a_mprepulse inhibition QTL 11a (mouse)1280989143114989143Mouse

Markers in Region
UniSTS:236906  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381285,113,800 - 85,114,017UniSTSGRCm38
MGSCv371286,454,750 - 86,454,967UniSTSGRCm37
Celera1286,571,048 - 86,571,265UniSTS
Cytogenetic Map12D3UniSTS
MARC_2710-2711:991933212:3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381285,130,477 - 85,130,939UniSTSGRCm38
MGSCv371286,471,427 - 86,471,889UniSTSGRCm37
Celera1286,587,618 - 86,588,080UniSTS
Cytogenetic Map12D3UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_030225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC127582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK005477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK198168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ308553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT010197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000053811   ⟹   ENSMUSP00000060346
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,157,607 - 85,180,862 (+)Ensembl
GRCm38.p6 Ensembl1285,110,833 - 85,134,088 (+)Ensembl
Ensembl Acc Id: ENSMUST00000220559
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,170,568 - 85,171,167 (+)Ensembl
GRCm38.p6 Ensembl1285,123,794 - 85,124,393 (+)Ensembl
Ensembl Acc Id: ENSMUST00000220633
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,174,512 - 85,177,275 (+)Ensembl
GRCm38.p6 Ensembl1285,127,738 - 85,130,501 (+)Ensembl
Ensembl Acc Id: ENSMUST00000221288
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,157,632 - 85,170,580 (+)Ensembl
GRCm38.p6 Ensembl1285,110,858 - 85,123,806 (+)Ensembl
Ensembl Acc Id: ENSMUST00000221357   ⟹   ENSMUSP00000152664
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,157,611 - 85,181,619 (+)Ensembl
GRCm38.p6 Ensembl1285,110,837 - 85,134,845 (+)Ensembl
Ensembl Acc Id: ENSMUST00000221842
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,157,667 - 85,170,583 (+)Ensembl
GRCm38.p6 Ensembl1285,110,893 - 85,123,809 (+)Ensembl
Ensembl Acc Id: ENSMUST00000222472
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,177,215 - 85,178,802 (+)Ensembl
GRCm38.p6 Ensembl1285,130,441 - 85,132,028 (+)Ensembl
Ensembl Acc Id: ENSMUST00000222998
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,164,834 - 85,166,070 (+)Ensembl
GRCm38.p6 Ensembl1285,118,060 - 85,119,296 (+)Ensembl
Ensembl Acc Id: ENSMUST00000223332   ⟹   ENSMUSP00000152235
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,157,667 - 85,175,111 (+)Ensembl
GRCm38.p6 Ensembl1285,110,893 - 85,128,337 (+)Ensembl
Ensembl Acc Id: ENSMUST00000223409
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,177,047 - 85,177,391 (+)Ensembl
GRCm38.p6 Ensembl1285,130,273 - 85,130,617 (+)Ensembl
Ensembl Acc Id: ENSMUST00000223413
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,172,635 - 85,180,864 (+)Ensembl
GRCm38.p6 Ensembl1285,125,861 - 85,134,090 (+)Ensembl
Ensembl Acc Id: ENSMUST00000223415
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,157,632 - 85,160,851 (+)Ensembl
GRCm38.p6 Ensembl1285,110,858 - 85,114,077 (+)Ensembl
Ensembl Acc Id: ENSMUST00000223438
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1285,174,856 - 85,179,438 (+)Ensembl
GRCm38.p6 Ensembl1285,128,082 - 85,132,664 (+)Ensembl
RefSeq Acc Id: NM_030225   ⟹   NP_084501
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,157,607 - 85,180,865 (+)NCBI
GRCm381285,110,833 - 85,134,091 (+)NCBI
MGSCv371286,451,783 - 86,475,041 (+)RGD
Celera1286,568,081 - 86,591,232 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006516392   ⟹   XP_006516455
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391285,157,597 - 85,180,865 (+)NCBI
GRCm381285,110,822 - 85,134,091 (+)NCBI
Sequence:
RefSeq Acc Id: NP_084501   ⟸   NM_030225
- UniProtKB: Q4FK55 (UniProtKB/Swiss-Prot),   Q3UEA0 (UniProtKB/Swiss-Prot),   Q8CIE8 (UniProtKB/Swiss-Prot),   Q9D2G2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006516455   ⟸   XM_006516392
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSMUSP00000152235   ⟸   ENSMUST00000223332
Ensembl Acc Id: ENSMUSP00000060346   ⟸   ENSMUST00000053811
Ensembl Acc Id: ENSMUSP00000152664   ⟸   ENSMUST00000221357
Protein Domains
Lipoyl-binding

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9D2G2-F1-model_v2 AlphaFold Q9D2G2 1-454 view protein structure

Promoters
RGD ID:8678818
Promoter ID:EPDNEW_M17439
Type:initiation region
Name:Dlst_1
Description:Mus musculus dihydrolipoamide S-succinyltransferase (E2 componentof 2-oxo-glutarate complex) , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381285,110,858 - 85,110,918EPDNEW
RGD ID:6822868
Promoter ID:MM_KWN:12190
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:LINCRNA_246,   NM_030225,   UC007OGI.1,   UC007OGK.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361286,451,171 - 86,451,927 (+)MPROMDB
RGD ID:6822681
Promoter ID:MM_KWN:12191
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Liver,   Lung
Transcripts:UC007OGL.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361286,470,646 - 86,471,802 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1926170 AgrOrtholog
Ensembl Genes ENSMUSG00000004789 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000053811 ENTREZGENE
  ENSMUST00000053811.10 UniProtKB/Swiss-Prot
  ENSMUST00000221357.2 UniProtKB/Swiss-Prot
  ENSMUST00000223332.2 UniProtKB/TrEMBL
Gene3D-CATH 2.40.50.100 UniProtKB/Swiss-Prot
  3.30.559.10 UniProtKB/Swiss-Prot
InterPro 2-oxoA_DH_lipoyl-BS UniProtKB/Swiss-Prot
  2-oxoacid_dehydrogenase UniProtKB/Swiss-Prot
  2-oxoacid_DH_actylTfrase UniProtKB/Swiss-Prot
  Biotin_lipoyl UniProtKB/Swiss-Prot
  CAT-like_dom_sf UniProtKB/Swiss-Prot
  Single_hybrid_motif UniProtKB/Swiss-Prot
  SucB UniProtKB/Swiss-Prot
KEGG Report mmu:78920 UniProtKB/Swiss-Prot
MGD MGI:1926170 ENTREZGENE
NCBI Gene 78920 ENTREZGENE
PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL UniProtKB/Swiss-Prot
  DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED UniProtKB/Swiss-Prot
Pfam 2-oxoacid_dh UniProtKB/Swiss-Prot
  Biotin_lipoyl UniProtKB/Swiss-Prot
PhenoGen Dlst PhenoGen
PROSITE BIOTINYL_LIPOYL UniProtKB/Swiss-Prot
  LIPOYL UniProtKB/Swiss-Prot
Superfamily-SCOP CoA-dependent acyltransferases UniProtKB/Swiss-Prot
  SSF51230 UniProtKB/Swiss-Prot
UniProt A0A1Y7VN44_MOUSE UniProtKB/TrEMBL
  ODO2_MOUSE UniProtKB/Swiss-Prot
  Q3UEA0 ENTREZGENE
  Q4FK55 ENTREZGENE
  Q8BHN4_MOUSE UniProtKB/TrEMBL
  Q8CIE8 ENTREZGENE
  Q9D2G2 ENTREZGENE
UniProt Secondary Q3UEA0 UniProtKB/Swiss-Prot
  Q4FK55 UniProtKB/Swiss-Prot
  Q8CIE8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-06-27 Dlst  dihydrolipoamide S-succinyltransferase  Dlst  dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)  Symbol and/or name change 5135510 APPROVED