Morc2a (microrchidia 2A) - Rat Genome Database

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Gene: Morc2a (microrchidia 2A) Mus musculus
Analyze
Symbol: Morc2a
Name: microrchidia 2A
RGD ID: 1551651
MGI Page MGI
Description: Enables histone binding activity. Involved in negative regulation of single stranded viral RNA replication via double stranded DNA intermediate and positive regulation of DNA methylation-dependent heterochromatin formation. Predicted to be located in cytosol; nuclear matrix; and nucleoplasm. Predicted to be part of heterochromatin. Predicted to be active in nucleus. Is expressed in gonad; heart; and nervous system. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease axonal type 2Z. Orthologous to human MORC2 (MORC family CW-type zinc finger 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 8430403M08Rik; ATPase MORC2A; MORC family CW-type zinc finger protein 2A; RP23-309E11.5; Zcwcc1; zinc finger CW-type coiled-coil domain protein 1; zinc finger, CW-type with coiled-coil domain 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm17904  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39113,599,132 - 3,640,477 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl113,599,191 - 3,640,477 (+)EnsemblGRCm39 Ensembl
GRCm38113,649,189 - 3,690,477 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl113,649,191 - 3,690,477 (+)EnsemblGRCm38mm10GRCm38
MGSCv37113,549,497 - 3,590,375 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36113,558,703 - 3,590,375 (+)NCBIMGSCv36mm8
Celera114,140,624 - 4,181,559 (+)NCBICelera
Cytogenetic Map11A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromosome  (IEA)
cytoplasm  (ISO)
cytosol  (ISO)
heterochromatin  (ISO)
nuclear matrix  (ISO)
nucleoplasm  (ISO)
nucleus  (IBA,ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
aberrant origin of the right subclavian artery  (IEA)
abnormal adrenal gland morphology  (IEA)
abnormal anterior cerebral artery morphology  (IEA)
abnormal atrioventricular cushion morphology  (IEA)
abnormal brain internal capsule morphology  (IEA)
abnormal brain morphology  (IEA)
abnormal carpal bone morphology  (IEA)
abnormal celiac artery morphology  (IEA)
abnormal choroid plexus morphology  (IEA)
abnormal clavicle morphology  (IEA)
abnormal common bile duct morphology  (IEA)
abnormal corpora quadrigemina morphology  (IAGP)
abnormal diaphragm morphology  (IEA)
abnormal dorsal pancreas topology  (IEA)
abnormal ductus venosus topology  (IEA)
abnormal external auditory canal morphology  (IEA)
abnormal eye muscle morphology  (IEA)
abnormal facial nerve topology  (IEA)
abnormal forebrain morphology  (IEA)
abnormal forelimb morphology  (IEA)
abnormal gait  (IEA)
abnormal head morphology  (IEA)
abnormal hindbrain morphology  (IEA)
abnormal humerus morphology  (IEA)
abnormal hyoid bone body morphology  (IEA)
abnormal hypoglossal nerve topology  (IEA)
abnormal incisor morphology  (IEA)
abnormal inferior vena cava morphology  (IEA)
abnormal infrahyoid muscle connection  (IEA)
abnormal inner ear morphology  (IEA)
abnormal interatrial septum morphology  (IEA)
abnormal internal carotid artery topology  (IEA)
abnormal intestine placement  (IEA)
abnormal intrathoracic topology of vagus nerve  (IEA)
abnormal jaw morphology  (IEA)
abnormal left lung morphology  (IEA)
abnormal lens morphology  (IEA)
abnormal liver morphology  (IEA)
abnormal liver vasculature morphology  (IEA)
abnormal masticatory muscle morphology  (IEA)
abnormal Meckel's cartilage morphology  (IEA)
abnormal middle ear morphology  (IEA)
abnormal middle ear ossicle morphology  (IEA)
abnormal Mullerian duct morphology  (IEA)
abnormal nasal cavity morphology  (IEA)
abnormal nasal septum morphology  (IEA)
abnormal neuron physiology  (IAGP)
abnormal occipital bone morphology  (IEA)
abnormal olfactory bulb morphology  (IEA)
abnormal olfactory bulb position  (IEA)
abnormal olfactory nerve morphology  (IEA)
abnormal optic cup morphology  (IEA)
abnormal optic stalk morphology  (IEA)
abnormal pectinate muscle morphology  (IEA)
abnormal pineal gland morphology  (IEA)
abnormal pituitary gland morphology  (IEA)
abnormal radius morphology  (IEA)
abnormal rib morphology  (IEA)
abnormal right lung morphology  (IEA)
abnormal salivary gland morphology  (IEA)
abnormal scapula morphology  (IEA)
abnormal sphenoid bone morphology  (IEA)
abnormal stapes morphology  (IEA)
abnormal subclavian artery origin  (IEA)
abnormal testis morphology  (IEA)
abnormal thymus topology  (IEA)
abnormal thyroid gland morphology  (IEA)
abnormal ulna morphology  (IEA)
abnormal ureter topology  (IEA)
abnormal vertebral arch morphology  (IEA)
abnormal vertebral artery origin  (IEA)
abnormal vertebral body morphology  (IEA)
abnormal vitelline vein connection  (IEA)
abnormal vomeronasal organ morphology  (IEA)
abnormal Wolffian duct morphology  (IEA)
abnormal Wolffian duct topology  (IEA)
absent connection between subcutaneous lymph vessels and lymph sac  (IEA)
absent digastric muscle  (IEA)
absent ductus venosus valve  (IEA)
absent external auditory canal  (IEA)
absent eye muscles  (IEA)
absent humerus  (IEA)
absent intracranial segment of vertebral artery  (IEA)
absent intrahepatic inferior vena cava segment  (IEA)
absent mandibular nerve  (IEA)
absent Mullerian ducts  (IEA)
absent neurocranium  (IEA)
absent occipital bone  (IEA)
absent optic chiasm  (IEA)
absent pituitary gland  (IEA)
absent posterior communicating artery  (IEA)
absent radius  (IEA)
absent salivary gland  (IEA)
absent segment of anterior cerebral artery  (IEA)
absent stapedial artery  (IEA)
absent superior cervical ganglion  (IEA)
absent upper incisors  (IEA)
absent ventral pancreas  (IEA)
absent vertebral body  (IEA)
absent Wolffian ducts  (IEA)
aphakia  (IEA)
athymia  (IEA)
basisphenoid bone foramen  (IEA)
blood in lymph vessels  (IEA)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased circulating HDL cholesterol level  (IEA)
decreased embryo size  (IAGP)
decreased grip strength  (IAGP)
decreased locomotor activity  (IAGP)
diaphragmatic hernia  (IEA)
domed cranium  (IAGP)
double inlet heart right ventricle  (IEA)
double outlet right ventricle  (IEA)
embryonic growth retardation  (IEA)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
enhanced contextual conditioning behavior  (IAGP)
enlarged brain ventricles  (IEA)
facial cleft  (IEA)
fragmented Meckel's cartilage  (IEA)
heterochrony  (IEA)
holoprosencephaly  (IEA)
impaired coordination  (IAGP)
increased brain size  (IAGP)
increased midbrain size  (IAGP)
increased trigeminal neuroma incidence  (IEA)
intracerebral hemorrhage  (IEA)
left sided brachiocephalic trunk  (IEA)
liver cyst  (IEA)
muscular ventricular septal defect  (IEA)
oligodactyly  (IEA)
perimembraneous ventricular septal defect  (IEA)
persistent dorsal ophthalmic artery  (IEA)
persistent truncus arteriosis  (IEA)
premature death  (IAGP)
prenatal lethality prior to heart atrial septation  (IEA)
preweaning lethality, complete penetrance  (IEA)
reduced sympathetic cervical ganglion size  (IEA)
retro-esophageal left subclavian artery  (IEA)
right aortic arch  (IEA)
short tongue  (IEA)
small adrenal glands  (IEA)
small dorsal pancreas  (IEA)
small kidney  (IEA)
small ovary  (IEA)
small pancreas  (IEA)
small thymus  (IEA)
small thyroid gland  (IEA)
small trigeminal ganglion  (IEA)
small ventral pancreas  (IEA)
subcutaneous edema  (IEA)
thoracoschisis  (IEA)
tongue hypoplasia  (IEA)
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15368895   PMID:15489334   PMID:16141072   PMID:16141073   PMID:18799693  
PMID:19026994   PMID:19156209   PMID:21677750   PMID:21873635   PMID:24194600   PMID:24286864   PMID:29329290   PMID:29728365   PMID:30624633   PMID:31040226   PMID:32325033   PMID:33230847  
PMID:34695197   PMID:36332029  


Genomics

Comparative Map Data
Morc2a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39113,599,132 - 3,640,477 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl113,599,191 - 3,640,477 (+)EnsemblGRCm39 Ensembl
GRCm38113,649,189 - 3,690,477 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl113,649,191 - 3,690,477 (+)EnsemblGRCm38mm10GRCm38
MGSCv37113,549,497 - 3,590,375 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36113,558,703 - 3,590,375 (+)NCBIMGSCv36mm8
Celera114,140,624 - 4,181,559 (+)NCBICelera
Cytogenetic Map11A1NCBI
MORC2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382230,925,130 - 30,968,774 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl2230,925,130 - 30,968,774 (-)EnsemblGRCh38hg38GRCh38
GRCh372231,321,117 - 31,364,760 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362229,652,600 - 29,694,187 (-)NCBINCBI36Build 36hg18NCBI36
Build 342229,647,153 - 29,688,741NCBI
Celera2215,122,742 - 15,164,330 (-)NCBICelera
Cytogenetic Map22q12.2NCBI
HuRef2214,285,133 - 14,326,407 (-)NCBIHuRef
CHM1_12231,282,433 - 31,324,011 (-)NCBICHM1_1
T2T-CHM13v2.02231,388,696 - 31,432,332 (-)NCBIT2T-CHM13v2.0
Morc2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21478,529,603 - 78,571,375 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1478,527,009 - 78,571,343 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1482,979,369 - 83,012,468 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01484,219,459 - 84,252,558 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01480,665,250 - 80,698,349 (+)NCBIRnor_WKY
Rnor_6.01483,889,138 - 83,930,263 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1483,889,089 - 83,930,522 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01484,574,236 - 84,615,162 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41484,303,606 - 84,336,702 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11484,313,435 - 84,355,799 (+)NCBI
Celera1477,450,490 - 77,483,586 (+)NCBICelera
Cytogenetic Map14q21NCBI
Morc2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554555,124,737 - 5,164,495 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554555,124,737 - 5,164,495 (-)NCBIChiLan1.0ChiLan1.0
MORC2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan12243,542,482 - 43,625,953 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02211,912,043 - 11,995,497 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12229,751,768 - 29,795,632 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2229,753,241 - 29,795,632 (-)Ensemblpanpan1.1panPan2
MORC2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12623,951,704 - 23,993,620 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2623,953,130 - 23,992,431 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2623,822,612 - 23,864,487 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02624,334,724 - 24,376,359 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2624,334,732 - 24,376,451 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12624,037,763 - 24,079,863 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02624,299,937 - 24,341,812 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02624,361,090 - 24,402,720 (-)NCBIUU_Cfam_GSD_1.0
Morc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118116,875,801 - 116,913,536 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936755130,983 - 171,492 (-)EnsemblSpeTri2.0
SpeTri2.0NW_004936755133,315 - 171,507 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MORC2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1447,755,267 - 47,799,628 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11447,755,264 - 47,800,432 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21450,866,492 - 50,911,012 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MORC2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11913,817,597 - 13,859,986 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1913,815,467 - 13,858,633 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045112,260,712 - 112,304,739 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Morc2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247477,384,270 - 7,426,285 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247477,386,052 - 7,426,257 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Morc2a
1065 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1531
Count of miRNA genes:564
Interacting mature miRNAs:704
Transcripts:ENSMUST00000093389, ENSMUST00000096441, ENSMUST00000126035, ENSMUST00000128666, ENSMUST00000131517, ENSMUST00000140242
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357722Vtbt11_mvertebral trabecular bone trait 11 (mouse)Not determined11123880487Mouse
1300768Tshp9_mtooth shape 9 (mouse)Not determined11125976374Mouse
1301765Skull15_mskull morphology 15 (mouse)Not determined11125976374Mouse
1300661Lmr6_mleishmaniasis resistance 6 (mouse)Not determined11125976374Mouse
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1122705234227232Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
27095914Pglq16_mpelvic girdle length QTL 16, 16 week (mouse)11325000018150000Mouse
27095919Pglq10_mpelvic girdle length QTL 10, 10 week (mouse)11325000018450000Mouse
27095925Pglq5_mpelvic girdle length QTL 5, 5 week (mouse)11325000019750000Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11325000034495048Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse

Markers in Region
AW742696  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38113,666,566 - 3,666,799UniSTSGRCm38
MGSCv37113,566,569 - 3,566,802UniSTSGRCm37
Celera114,157,752 - 4,157,985UniSTS
Cytogenetic Map11A1UniSTS
Whitehead/MRC_RH1111.46UniSTS
UniSTS:236507  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38113,689,340 - 3,689,738UniSTSGRCm38
MGSCv37113,589,343 - 3,589,741UniSTSGRCm37
Celera114,180,527 - 4,180,925UniSTS
Cytogenetic Map11A1UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000093389   ⟹   ENSMUSP00000091087
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl113,599,494 - 3,640,370 (+)Ensembl
GRCm38.p6 Ensembl113,649,494 - 3,690,370 (+)Ensembl
RefSeq Acc Id: ENSMUST00000096441   ⟹   ENSMUSP00000094176
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl113,599,191 - 3,640,477 (+)Ensembl
GRCm38.p6 Ensembl113,649,191 - 3,690,477 (+)Ensembl
RefSeq Acc Id: ENSMUST00000126035
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl113,629,907 - 3,633,907 (+)Ensembl
GRCm38.p6 Ensembl113,679,907 - 3,683,907 (+)Ensembl
RefSeq Acc Id: ENSMUST00000128666
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl113,630,362 - 3,633,689 (+)Ensembl
GRCm38.p6 Ensembl113,680,362 - 3,683,689 (+)Ensembl
RefSeq Acc Id: ENSMUST00000131517
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl113,630,267 - 3,631,151 (+)Ensembl
GRCm38.p6 Ensembl113,680,267 - 3,681,151 (+)Ensembl
RefSeq Acc Id: ENSMUST00000140242   ⟹   ENSMUSP00000120211
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl113,599,759 - 3,619,410 (+)Ensembl
GRCm38.p6 Ensembl113,649,759 - 3,669,410 (+)Ensembl
RefSeq Acc Id: NM_001159288   ⟹   NP_001152760
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39113,599,437 - 3,640,477 (+)NCBI
GRCm38113,649,437 - 3,690,477 (+)NCBI
MGSCv37113,549,497 - 3,590,375 (+)RGD
Celera114,140,624 - 4,181,559 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001363202   ⟹   NP_001350131
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39113,599,437 - 3,640,477 (+)NCBI
GRCm38113,649,437 - 3,690,477 (+)NCBI
Sequence:
RefSeq Acc Id: NM_198162   ⟹   NP_937805
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39113,608,672 - 3,640,477 (+)NCBI
GRCm38113,658,672 - 3,690,477 (+)NCBI
MGSCv37113,549,497 - 3,590,375 (+)RGD
Celera114,140,624 - 4,181,559 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006514871   ⟹   XP_006514934
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39113,599,204 - 3,640,477 (+)NCBI
GRCm38113,649,204 - 3,690,477 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011243775   ⟹   XP_011242077
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39113,599,132 - 3,640,477 (+)NCBI
GRCm38113,649,189 - 3,690,477 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036157052   ⟹   XP_036012945
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39113,599,284 - 3,640,477 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_937805   ⟸   NM_198162
- Peptide Label: isoform 2
- UniProtKB: Q6PCN6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001152760   ⟸   NM_001159288
- Peptide Label: isoform 1
- UniProtKB: Q6P547 (UniProtKB/Swiss-Prot),   Q69ZX6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006514934   ⟸   XM_006514871
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011242077   ⟸   XM_011243775
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001350131   ⟸   NM_001363202
- Peptide Label: isoform 1
- UniProtKB: Q6P547 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: ENSMUSP00000091087   ⟸   ENSMUST00000093389
RefSeq Acc Id: ENSMUSP00000120211   ⟸   ENSMUST00000140242
RefSeq Acc Id: ENSMUSP00000094176   ⟸   ENSMUST00000096441
RefSeq Acc Id: XP_036012945   ⟸   XM_036157052
- Peptide Label: isoform X2
- UniProtKB: Q6PCN6 (UniProtKB/TrEMBL)
Protein Domains
CW-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q69ZX6-F1-model_v2 AlphaFold Q69ZX6 1-1030 view protein structure

Promoters
RGD ID:8673746
Promoter ID:EPDNEW_M14904
Type:initiation region
Name:Morc2a_1
Description:Mus musculus microrchidia 2A , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38113,649,435 - 3,649,495EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1921772 AgrOrtholog
Ensembl Genes ENSMUSG00000034543 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000091087 ENTREZGENE
  ENSMUSP00000091087.3 UniProtKB/Swiss-Prot
  ENSMUSP00000094176 ENTREZGENE
  ENSMUSP00000094176.4 UniProtKB/Swiss-Prot
  ENSMUSP00000120211.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000093389 ENTREZGENE
  ENSMUST00000093389.9 UniProtKB/Swiss-Prot
  ENSMUST00000096441 ENTREZGENE
  ENSMUST00000096441.5 UniProtKB/Swiss-Prot
  ENSMUST00000140242.8 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.100 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.565.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro HATPase_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Morc_S5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_CW UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:74522 UniProtKB/Swiss-Prot
MGD MGI:1921772 ENTREZGENE
NCBI Gene 74522 ENTREZGENE
PANTHER ATPASE MORC2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HATPase_c_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Morc6_S5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-CW UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Morc2a PhenoGen
PROSITE ZF_CW UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF55874 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt MOR2A_MOUSE UniProtKB/Swiss-Prot
  Q5QNQ8_MOUSE UniProtKB/TrEMBL
  Q69ZX6 ENTREZGENE
  Q6P547 ENTREZGENE
  Q6PCN6 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q5QNQ7 UniProtKB/Swiss-Prot
  Q6P547 UniProtKB/Swiss-Prot