Kirrel1 (kirre like nephrin family adhesion molecule 1) - Rat Genome Database

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Gene: Kirrel1 (kirre like nephrin family adhesion molecule 1) Mus musculus
Analyze
Symbol: Kirrel1 (Ensembl: Kirrel)
Name: kirre like nephrin family adhesion molecule 1
RGD ID: 1551642
MGI Page MGI
Description: Predicted to enable cell adhesion molecule binding activity and myosin binding activity. Acts upstream of or within several processes, including negative regulation of protein phosphorylation; positive regulation of actin filament polymerization; and renal protein absorption. Located in cell-cell junction; dendritic shaft; and plasma membrane. Is expressed in several structures, including brain; craniocervical region bone; heart; limb primordium; and sensory organ. Human ortholog(s) of this gene implicated in nephrotic syndrome type 23. Orthologous to human KIRREL1 (kirre like nephrin family adhesion molecule 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 6720469N11Rik; kin of IRRE like (Drosophila); kin of IRRE like 1; kin of irre like 1 (drosophila); kin of IRRE-like protein 1; kin of irregular chiasm-like protein 1; Kir; Kirrel; Nep; Neph1; nephrin 1; nephrin-like protein 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39386,985,900 - 87,082,084 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl386,985,900 - 87,082,054 (-)EnsemblGRCm39 Ensembl
GRCm38387,078,593 - 87,174,777 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl387,078,593 - 87,174,747 (-)EnsemblGRCm38mm10GRCm38
MGSCv37386,882,514 - 86,978,669 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36387,168,739 - 87,227,036 (-)NCBIMGSCv36mm8
Celera387,105,684 - 87,203,142 (-)NCBICelera
Cytogenetic Map3F1NCBI
cM Map338.18NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. MGD IEA MGD IEA
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:9560157   PMID:10349636   PMID:10512203   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11416156   PMID:11562357   PMID:11733557   PMID:12424224   PMID:12477932  
PMID:12520002   PMID:12538735   PMID:12668668   PMID:12782671   PMID:12865409   PMID:12904583   PMID:14610273   PMID:15489334   PMID:15782199   PMID:15840001   PMID:15924139   PMID:16141072  
PMID:16141073   PMID:16874800   PMID:17923684   PMID:17967808   PMID:18022324   PMID:18082680   PMID:18328474   PMID:18562307   PMID:18752272   PMID:18799693   PMID:19470472   PMID:20233749  
PMID:21241806   PMID:21267068   PMID:21306299   PMID:21677750   PMID:21873635   PMID:22205279   PMID:23637329   PMID:25730372   PMID:25826454   PMID:26792178   PMID:27430022   PMID:27707879  
PMID:28378742   PMID:29717104   PMID:34391780  


Genomics

Comparative Map Data
Kirrel1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39386,985,900 - 87,082,084 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl386,985,900 - 87,082,054 (-)EnsemblGRCm39 Ensembl
GRCm38387,078,593 - 87,174,777 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl387,078,593 - 87,174,747 (-)EnsemblGRCm38mm10GRCm38
MGSCv37386,882,514 - 86,978,669 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36387,168,739 - 87,227,036 (-)NCBIMGSCv36mm8
Celera387,105,684 - 87,203,142 (-)NCBICelera
Cytogenetic Map3F1NCBI
cM Map338.18NCBI
KIRREL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381157,993,645 - 158,100,262 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1157,993,273 - 158,100,262 (+)EnsemblGRCh38hg38GRCh38
GRCh371157,963,435 - 158,070,052 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361156,229,687 - 156,332,465 (+)NCBINCBI36Build 36hg18NCBI36
Build 341154,776,135 - 154,878,919NCBI
Celera1131,034,468 - 131,136,921 (+)NCBICelera
Cytogenetic Map1q23.1NCBI
HuRef1129,321,031 - 129,423,944 (+)NCBIHuRef
CHM1_11159,359,575 - 159,462,305 (+)NCBICHM1_1
T2T-CHM13v2.01157,130,739 - 157,237,353 (+)NCBIT2T-CHM13v2.0
Kirrel1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82174,819,564 - 174,912,998 (-)NCBIGRCr8
mRatBN7.22172,521,644 - 172,615,057 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2172,525,245 - 172,615,299 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2179,676,244 - 179,730,913 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02177,698,563 - 177,753,230 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02172,286,976 - 172,341,500 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02186,420,743 - 186,515,209 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2186,420,795 - 186,515,135 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02205,825,636 - 205,919,683 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42179,114,757 - 179,169,185 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12179,064,862 - 179,119,291 (-)NCBI
Celera2166,483,236 - 166,536,703 (-)NCBICelera
Cytogenetic Map2q34NCBI
Kirrel1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554689,821,303 - 9,916,667 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554689,820,649 - 9,919,958 (+)NCBIChiLan1.0ChiLan1.0
KIRREL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2191,736,817 - 91,842,857 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1191,480,731 - 91,586,707 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01133,363,880 - 133,465,717 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11137,237,218 - 137,261,101 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1137,233,701 - 137,255,927 (+)Ensemblpanpan1.1panPan2
KIRREL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13823,530,930 - 23,593,957 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3823,530,885 - 23,594,236 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3823,556,953 - 23,620,213 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03823,696,328 - 23,762,792 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3823,699,336 - 23,763,035 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13823,440,193 - 23,506,559 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03823,993,900 - 24,059,856 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03824,394,780 - 24,461,104 (-)NCBIUU_Cfam_GSD_1.0
Kirrel1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244050583,719,999 - 3,761,108 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936847821,479 - 841,988 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936847820,538 - 844,829 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIRREL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl492,176,746 - 92,290,610 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1492,173,897 - 92,290,887 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24100,513,435 - 100,628,217 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KIRREL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1205,811,111 - 5,918,064 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl205,816,187 - 5,917,968 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660385,003,417 - 5,112,184 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kirrel1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247942,829,496 - 2,922,352 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247942,824,716 - 2,922,300 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kirrel1
3950 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3684
Count of miRNA genes:808
Interacting mature miRNAs:1056
Transcripts:ENSMUST00000041732, ENSMUST00000107618, ENSMUST00000159976
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
26884427Cvht4_mcranial vault height 4, 10 week (mouse)316054164109707316Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
26884422Cvht7_mcranial vault height 7, 16 week (mouse)328954149118893649Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
1301705Sles3_msystemic lupus erythmatosus suppressor 3 (mouse)Not determined337174862143353183Mouse
13208566Bmiq5_mbody mass index QTL 5 (mouse)340954435115793649Mouse
26884380Skwq1_mskull length QTL 1, 5 week (mouse)343954435101607316Mouse
26884378Skwq6_mskull length QTL 6, 10 week (mouse)351907421102307316Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
11039519Ltpr3_mLeishmania tropica response 3 (mouse)356704102100464137Mouse
12880419V125Dq4_mvitamin D active form serum level QTL 4 (mouse)35890730792907307Mouse
4141294Bmd24_mbone mineral density 24 (mouse)Not determined36174006195740241Mouse
1301971Cia5_mcollagen induced arthritis QTL 5 (mouse)Not determined366046658100046795Mouse
25314313Syncl1_msynaptonemal complex length 1 (mouse)367907333128393649Mouse
11251721Ewc3_methanol withdrawal and consumption 3 (mouse)369568554103568554Mouse
1301791Char4_mP. chabaudi malaria resistance QTL 4 (mouse)Not determined369625509100655290Mouse
1301422Sle11_msystematic lupus erythematosus susceptibility 11 (mouse)Not determined370208904104209042Mouse
11049572Lmr11c_mleishmaniasis resistance 11c (mouse)372139967106140094Mouse
1300982Lmr11_mleishmaniasis resistance 11 (mouse)Not determined372139967106140094Mouse
1300595Tmevd2_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 2 (mouse)Not determined375463302109463549Mouse
1301392Eae3_msusceptibility to experimental allergic encephalomyelitis 3 (mouse)Not determined379548730113548837Mouse
1301947Pcfm3_mperiosteal circumference and femur length 3 (mouse)Not determined381084652115084797Mouse
1301904Iba2_minduction of brown adipocytes 2 (mouse)Not determined382147043116147184Mouse
11041900Lmr11a_mleishmaniasis resistance 11a (mouse)383463991117464137Mouse
11039510Ltpr3d_mLeishmania tropica response 3d (mouse)383463991117464137Mouse
11039511Ltpr3c_mLeishmania tropica response 3c (mouse)383463991117464137Mouse
11039507Ltpr3g_mLeishmania tropica response 3g (mouse)383463991117464137Mouse
11039508Ltpr3f_mLeishmania tropica response 3f (mouse)383463991117464137Mouse
11039509Ltpr3e_mLeishmania tropica response 3e (mouse)383463991117464137Mouse
11039512Ltpr3b_mLeishmania tropica response 3b (mouse)383463991117464137Mouse
1301272Cfsw1_mcystic fibrosis survival to weaning 1 (mouse)Not determined383882912117883044Mouse
4142099Cq3_mcholesterol QTL 3 (mouse)Not determined384888918118889067Mouse
14746984Manh54_mmandible shape 54 (mouse)385289152119289152Mouse

Markers in Region
D3Mit155  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38387,126,643 - 87,126,775UniSTSGRCm38
MGSCv37386,930,565 - 86,930,697UniSTSGRCm37
Cytogenetic Map3F1UniSTS
cM Map339.7UniSTS
Whitehead Genetic329.5UniSTS
D3Mit155.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38387,126,737 - 87,126,846UniSTSGRCm38
MGSCv37386,930,659 - 86,930,768UniSTSGRCm37
Celera387,154,636 - 87,154,745UniSTS
Cytogenetic Map3F1UniSTS
cM Map339.7UniSTS
cM Map3 UniSTS
Whitehead Genetic329.5UniSTS
UniSTS:234720  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38387,082,676 - 87,082,914UniSTSGRCm38
MGSCv37386,886,598 - 86,886,836UniSTSGRCm37
Celera387,109,768 - 87,110,006UniSTS
Cytogenetic Map3F1UniSTS
PMC164293P3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38387,084,922 - 87,085,123UniSTSGRCm38
MGSCv37386,888,844 - 86,889,045UniSTSGRCm37
Celera387,112,014 - 87,112,215UniSTS
Cytogenetic Map3F1UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001170985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001377046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_130867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011240028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011240029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC102115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF480411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI843542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY017368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY243095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY736743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ106213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ128949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV559096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000041732   ⟹   ENSMUSP00000043756
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl386,991,935 - 87,081,857 (-)Ensembl
GRCm38.p6 Ensembl387,084,628 - 87,174,550 (-)Ensembl
RefSeq Acc Id: ENSMUST00000107618   ⟹   ENSMUSP00000103243
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl386,985,908 - 87,082,054 (-)Ensembl
GRCm38.p6 Ensembl387,078,601 - 87,174,747 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159976   ⟹   ENSMUSP00000125525
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl386,985,900 - 87,082,007 (-)Ensembl
GRCm38.p6 Ensembl387,078,593 - 87,174,700 (-)Ensembl
RefSeq Acc Id: NM_001170985   ⟹   NP_001164456
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39386,985,900 - 87,081,844 (-)NCBI
GRCm38387,078,593 - 87,174,537 (-)NCBI
MGSCv37386,882,514 - 86,978,669 (-)RGD
Celera387,105,684 - 87,203,142 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001377046   ⟹   NP_001363975
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39386,985,900 - 87,081,844 (-)NCBI
GRCm38387,078,593 - 87,174,537 (-)NCBI
Sequence:
RefSeq Acc Id: NM_130867   ⟹   NP_570937
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39386,985,900 - 87,081,844 (-)NCBI
GRCm38387,078,593 - 87,174,537 (-)NCBI
MGSCv37386,882,514 - 86,978,669 (-)RGD
Celera387,105,684 - 87,203,142 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006501076   ⟹   XP_006501139
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39386,985,900 - 87,082,064 (-)NCBI
GRCm38387,078,593 - 87,174,696 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011240028   ⟹   XP_011238330
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39386,985,900 - 87,082,049 (-)NCBI
GRCm38387,078,593 - 87,174,704 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011240029   ⟹   XP_011238331
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39386,985,900 - 87,082,084 (-)NCBI
GRCm38387,078,593 - 87,174,777 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017319471   ⟹   XP_017174960
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39386,985,900 - 87,038,425 (-)NCBI
GRCm38387,078,593 - 87,129,059 (-)NCBI
Sequence:
RefSeq Acc Id: NP_570937   ⟸   NM_130867
- Peptide Label: isoform 1 precursor
- UniProtKB: Q8CJ59 (UniProtKB/Swiss-Prot),   Q8CIJ4 (UniProtKB/Swiss-Prot),   Q923L4 (UniProtKB/Swiss-Prot),   Q80W68 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001164456   ⟸   NM_001170985
- Peptide Label: isoform 1 precursor
- UniProtKB: Q8CJ59 (UniProtKB/Swiss-Prot),   Q8CIJ4 (UniProtKB/Swiss-Prot),   Q923L4 (UniProtKB/Swiss-Prot),   Q80W68 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006501139   ⟸   XM_006501076
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011238331   ⟸   XM_011240029
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011238330   ⟸   XM_011240028
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017174960   ⟸   XM_017319471
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: NP_001363975   ⟸   NM_001377046
- Peptide Label: isoform 2 precursor
RefSeq Acc Id: ENSMUSP00000125525   ⟸   ENSMUST00000159976
RefSeq Acc Id: ENSMUSP00000103243   ⟸   ENSMUST00000107618
RefSeq Acc Id: ENSMUSP00000043756   ⟸   ENSMUST00000041732
Protein Domains
Ig-like C2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q80W68-F1-model_v2 AlphaFold Q80W68 1-789 view protein structure

Promoters
RGD ID:6833228
Promoter ID:MM_KWN:34776
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   MEF_B6
Transcripts:AK032898_6720469N11RIK
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36386,883,156 - 86,885,607 (-)MPROMDB
RGD ID:6881040
Promoter ID:EPDNEW_M3971
Type:initiation region
Name:Kirrel_1
Description:Mus musculus kirre like nephrin family adhesion molecule 1 ,transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38387,174,667 - 87,174,727EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1891396 AgrOrtholog
Ensembl Genes ENSMUSG00000041734 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000041732.9 UniProtKB/Swiss-Prot
  ENSMUST00000107618 ENTREZGENE
  ENSMUST00000107618.9 UniProtKB/Swiss-Prot
  ENSMUST00000159976 ENTREZGENE
  ENSMUST00000159976.8 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot
InterPro CD80_C2-set UniProtKB/Swiss-Prot
  Ig-like_dom UniProtKB/Swiss-Prot
  Ig-like_dom_sf UniProtKB/Swiss-Prot
  Ig-like_fold UniProtKB/Swiss-Prot
  Ig_I-set UniProtKB/Swiss-Prot
  Ig_sub UniProtKB/Swiss-Prot
  Ig_sub2 UniProtKB/Swiss-Prot
KEGG Report mmu:170643 UniProtKB/Swiss-Prot
MGD MGI:1891396 ENTREZGENE
NCBI Gene 170643 ENTREZGENE
PANTHER KIN OF IRRE-LIKE PROTEIN 1 UniProtKB/Swiss-Prot
  NEPHRIN UniProtKB/Swiss-Prot
Pfam C2-set_2 UniProtKB/Swiss-Prot
  I-set UniProtKB/Swiss-Prot
  Ig_3 UniProtKB/Swiss-Prot
PhenoGen Kirrel1 PhenoGen
PROSITE IG_LIKE UniProtKB/Swiss-Prot
SMART IGc2 UniProtKB/Swiss-Prot
  SM00409 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot
UniProt KIRR1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8CIJ4 ENTREZGENE
  Q8CJ59 ENTREZGENE
  Q923L4 ENTREZGENE
UniProt Secondary Q8CIJ4 UniProtKB/Swiss-Prot
  Q8CJ59 UniProtKB/Swiss-Prot
  Q923L4 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-06-12 Kirrel1  kirre like nephrin family adhesion molecule 1  Kirrel  kirre like nephrin family adhesion molecule 1  Symbol and/or name updated 27372883 PROVISIONAL
2017-10-31 Kirrel  kirre like nephrin family adhesion molecule 1    kin of IRRE like (Drosophila)  Symbol and/or name change 5135510 APPROVED