Nbeal2 (neurobeachin-like 2) - Rat Genome Database

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Gene: Nbeal2 (neurobeachin-like 2) Mus musculus
Analyze
Symbol: Nbeal2
Name: neurobeachin-like 2
RGD ID: 1551459
MGI Page MGI
Description: Predicted to enable protein kinase binding activity. Acts upstream of or within blood coagulation; megakaryocyte development; and platelet alpha granule organization. Predicted to be located in endoplasmic reticulum. Predicted to be active in cytosol and membrane. Used to study gray platelet syndrome. Human ortholog(s) of this gene implicated in gray platelet syndrome. Orthologous to human NBEAL2 (neurobeachin like 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1110014F23Rik; BC042396; mKIAA0540; neurobeachin-like protein 2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399110,453,857 - 110,483,229 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9110,453,857 - 110,483,229 (-)EnsemblGRCm39 Ensembl
GRCm389110,624,789 - 110,654,161 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9110,624,789 - 110,654,161 (-)EnsemblGRCm38mm10GRCm38
MGSCv379110,527,293 - 110,556,665 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369110,469,609 - 110,498,977 (-)NCBIMGSCv36mm8
Celera9110,354,722 - 110,384,193 (-)NCBICelera
Cytogenetic Map9F2NCBI
cM Map960.27NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IBA)
endoplasmic reticulum  (ISO,ISS)
membrane  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Aug 31;10(4):167-80.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12466851   PMID:12477932   PMID:14610273   PMID:16141072   PMID:16141073   PMID:20562862   PMID:21677750   PMID:21873635  
PMID:23861251   PMID:23863626   PMID:25258341   PMID:25908104   PMID:26916731   PMID:26950939   PMID:27079884   PMID:28077416   PMID:28783043   PMID:28887433   PMID:29187380   PMID:29930006  
PMID:30354215   PMID:30936549   PMID:30973865   PMID:31171812   PMID:32245826   PMID:32325033   PMID:32697818   PMID:32929010   PMID:38355793  


Genomics

Comparative Map Data
Nbeal2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399110,453,857 - 110,483,229 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9110,453,857 - 110,483,229 (-)EnsemblGRCm39 Ensembl
GRCm389110,624,789 - 110,654,161 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9110,624,789 - 110,654,161 (-)EnsemblGRCm38mm10GRCm38
MGSCv379110,527,293 - 110,556,665 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369110,469,609 - 110,498,977 (-)NCBIMGSCv36mm8
Celera9110,354,722 - 110,384,193 (-)NCBICelera
Cytogenetic Map9F2NCBI
cM Map960.27NCBI
NBEAL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38346,979,666 - 47,009,701 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl346,979,666 - 47,009,704 (+)EnsemblGRCh38hg38GRCh38
GRCh37347,021,156 - 47,051,191 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36346,996,177 - 47,026,197 (+)NCBINCBI36Build 36hg18NCBI36
Celera346,959,687 - 46,989,710 (+)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef347,064,280 - 47,094,298 (+)NCBIHuRef
CHM1_1346,971,583 - 47,001,579 (+)NCBICHM1_1
T2T-CHM13v2.0346,996,032 - 47,026,064 (+)NCBIT2T-CHM13v2.0
Nbeal2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88119,481,608 - 119,511,997 (-)NCBIGRCr8
mRatBN7.28110,603,220 - 110,633,612 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8110,599,389 - 110,633,707 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.08118,893,987 - 118,924,390 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8118,893,995 - 118,926,613 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08118,234,959 - 118,265,227 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48115,005,741 - 115,034,787 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18115,025,276 - 115,055,017 (-)NCBI
Celera8109,887,398 - 109,917,800 (-)NCBICelera
Cytogenetic Map8q32NCBI
Nbeal2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542025,184,198 - 25,205,442 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542025,184,574 - 25,204,870 (-)NCBIChiLan1.0ChiLan1.0
NBEAL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2246,935,998 - 46,966,045 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1346,940,771 - 46,970,814 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0346,879,867 - 46,909,901 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1347,991,098 - 48,011,147 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl347,987,142 - 48,010,766 (+)Ensemblpanpan1.1panPan2
NBEAL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12041,806,903 - 41,836,286 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2041,803,702 - 41,827,587 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2041,723,466 - 41,752,507 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02042,290,044 - 42,319,069 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2042,290,104 - 42,318,880 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12041,531,736 - 41,560,747 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02041,932,687 - 41,961,726 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02042,213,648 - 42,242,687 (-)NCBIUU_Cfam_GSD_1.0
Nbeal2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118201,209,337 - 201,240,015 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936596758,495 - 789,168 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936596758,495 - 789,252 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NBEAL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1329,855,182 - 29,878,286 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11329,847,406 - 29,881,904 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21333,122,350 - 33,133,673 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NBEAL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1228,385,109 - 8,414,553 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl228,385,229 - 8,414,655 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041158,734,654 - 158,764,072 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nbeal2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473074,284,240 - 74,310,201 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473074,283,938 - 74,310,340 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Nbeal2
963 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2080
Count of miRNA genes:651
Interacting mature miRNAs:834
Transcripts:ENSMUST00000123996, ENSMUST00000126088, ENSMUST00000129095, ENSMUST00000130024, ENSMUST00000131017, ENSMUST00000133191, ENSMUST00000138072, ENSMUST00000149089, ENSMUST00000153960, ENSMUST00000167320
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979279863113279941Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982792386116792481Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989440541123440541Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989289476123289595Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986121898120118690Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9101829255124359700Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975682646114303447Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991560372124359700Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982792386116792481Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989162124123162124Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989859058118767089Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103118511124359700Mouse
14746992Manh67_mmandible shape 67 (mouse)993865836124359700Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982792386116792481Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63239711120191934Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986107600120107729Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963239711120191934Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978522698112522808Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103118511124359700Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103118511124359700Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975682646114303447Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987677199121677199Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993591658124359700Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9100889929124359700Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996746658124359700Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994863354112701997Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991560372124359700Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986625682120625682Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9101829255124359700Mouse
12910773Splic3_mspleen iron content 3 (mouse)991291078124359700Mouse
12910772Lvic6_mliver iron content 6 (mouse)991291078124359700Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991518283124359700Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63239711120191934Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981680321115680445Mouse
12910770Splic1_mspleen iron content 1 (mouse)991291078124359700Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991560372124359700Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991518283124359700Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991518283124359700Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991518283124359700Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984406017118406120Mouse
13515058Adip20d_madiposity 20d (mouse)9108744078118744078Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991518283124359700Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991518283124359700Mouse
1301484Bwq6_mbody weight (mouse)Not determined993591658124359700Mouse


Sequence


Ensembl Acc Id: ENSMUST00000123996   ⟹   ENSMUSP00000122014
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9110,458,638 - 110,463,517 (-)Ensembl
GRCm38.p6 Ensembl9110,629,570 - 110,634,449 (-)Ensembl
Ensembl Acc Id: ENSMUST00000126088
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9110,457,304 - 110,457,952 (-)Ensembl
GRCm38.p6 Ensembl9110,628,236 - 110,628,884 (-)Ensembl
Ensembl Acc Id: ENSMUST00000129095
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9110,457,976 - 110,458,736 (-)Ensembl
GRCm38.p6 Ensembl9110,628,908 - 110,629,668 (-)Ensembl
Ensembl Acc Id: ENSMUST00000130024   ⟹   ENSMUSP00000118061
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9110,454,111 - 110,467,685 (-)Ensembl
GRCm38.p6 Ensembl9110,625,043 - 110,638,617 (-)Ensembl
Ensembl Acc Id: ENSMUST00000131017   ⟹   ENSMUSP00000114660
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9110,454,111 - 110,461,119 (-)Ensembl
GRCm38.p6 Ensembl9110,625,043 - 110,632,051 (-)Ensembl
Ensembl Acc Id: ENSMUST00000133191   ⟹   ENSMUSP00000121373
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9110,453,857 - 110,483,229 (-)Ensembl
GRCm38.p6 Ensembl9110,624,789 - 110,654,161 (-)Ensembl
Ensembl Acc Id: ENSMUST00000138072
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9110,460,134 - 110,460,948 (-)Ensembl
GRCm38.p6 Ensembl9110,631,066 - 110,631,880 (-)Ensembl
Ensembl Acc Id: ENSMUST00000149089   ⟹   ENSMUSP00000119254
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9110,467,386 - 110,474,436 (-)Ensembl
GRCm38.p6 Ensembl9110,638,318 - 110,645,368 (-)Ensembl
Ensembl Acc Id: ENSMUST00000153960
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9110,463,688 - 110,464,155 (-)Ensembl
GRCm38.p6 Ensembl9110,634,620 - 110,635,087 (-)Ensembl
Ensembl Acc Id: ENSMUST00000167320   ⟹   ENSMUSP00000128586
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9110,453,857 - 110,483,229 (-)Ensembl
GRCm38.p6 Ensembl9110,624,789 - 110,654,161 (-)Ensembl
Ensembl Acc Id: ENSMUST00000196488   ⟹   ENSMUSP00000143265
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9110,453,940 - 110,483,210 (-)Ensembl
GRCm38.p6 Ensembl9110,624,872 - 110,654,142 (-)Ensembl
RefSeq Acc Id: NM_183276   ⟹   NP_899099
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399110,453,857 - 110,483,229 (-)NCBI
GRCm389110,624,789 - 110,654,161 (-)ENTREZGENE
MGSCv379110,527,293 - 110,556,665 (-)RGD
Celera9110,354,722 - 110,384,193 (-)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_899099   ⟸   NM_183276
- UniProtKB: E9Q9L6 (UniProtKB/TrEMBL),   B2RXS1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000118061   ⟸   ENSMUST00000130024
Ensembl Acc Id: ENSMUSP00000121373   ⟸   ENSMUST00000133191
Ensembl Acc Id: ENSMUSP00000114660   ⟸   ENSMUST00000131017
Ensembl Acc Id: ENSMUSP00000119254   ⟸   ENSMUST00000149089
Ensembl Acc Id: ENSMUSP00000128586   ⟸   ENSMUST00000167320
Ensembl Acc Id: ENSMUSP00000122014   ⟸   ENSMUST00000123996
Ensembl Acc Id: ENSMUSP00000143265   ⟸   ENSMUST00000196488
Promoters
RGD ID:6844239
Promoter ID:MM_KWN:58921
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Lung
Transcripts:OTTMUST00000081556,   OTTMUST00000081557,   UC009RUL.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369110,530,931 - 110,532,732 (-)MPROMDB
RGD ID:6844858
Promoter ID:MM_KWN:58922
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung
Transcripts:OTTMUST00000081552,   OTTMUST00000081555
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369110,534,416 - 110,535,367 (-)MPROMDB
RGD ID:6844859
Promoter ID:MM_KWN:58923
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Lung
Transcripts:OTTMUST00000081554
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369110,536,766 - 110,537,832 (-)MPROMDB
RGD ID:6844860
Promoter ID:MM_KWN:58925
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver,   Lung,   Spleen
Transcripts:OTTMUST00000081551
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369110,540,731 - 110,541,497 (-)MPROMDB
RGD ID:6844862
Promoter ID:MM_KWN:58926
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour,   Spleen
Transcripts:OTTMUST00000081550
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369110,547,626 - 110,548,126 (-)MPROMDB
RGD ID:6844861
Promoter ID:MM_KWN:58927
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_183276,   OTTMUST00000081549
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369110,556,431 - 110,556,931 (-)MPROMDB
RGD ID:8671010
Promoter ID:EPDNEW_M13536
Type:initiation region
Name:Nbeal2_2
Description:Mus musculus neurobeachin-like 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M13537  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389110,653,983 - 110,654,043EPDNEW
RGD ID:8671012
Promoter ID:EPDNEW_M13537
Type:initiation region
Name:Nbeal2_1
Description:Mus musculus neurobeachin-like 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M13536  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389110,654,184 - 110,654,244EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2448554 AgrOrtholog
Ensembl Genes ENSMUSG00000056724 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000123996.2 UniProtKB/TrEMBL
  ENSMUST00000130024.2 UniProtKB/TrEMBL
  ENSMUST00000131017.8 UniProtKB/TrEMBL
  ENSMUST00000133191.8 UniProtKB/Swiss-Prot
  ENSMUST00000149089.2 UniProtKB/TrEMBL
  ENSMUST00000167320 ENTREZGENE
  ENSMUST00000167320.8 UniProtKB/TrEMBL
  ENSMUST00000196488.5 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1540.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.25.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BEACH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BEACH_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BEACH_Domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ConA-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF4704 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NBCH_WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Neurobeachin_a-sol UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-BEACH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:235627 UniProtKB/TrEMBL
MGD MGI:2448554 ENTREZGENE
NCBI Gene 235627 ENTREZGENE
PANTHER BEIGE/BEACH-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13743:SF111 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Beach UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF4704 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF4800 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NBCH_WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Neurobeachin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_BEACH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Nbeal2 PhenoGen
PROSITE BEACH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_BEACH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/Swiss-Prot
SMART Beach UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF49899 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50978 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF81837 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JFQ4_MOUSE UniProtKB/TrEMBL
  B2RXS1 ENTREZGENE, UniProtKB/TrEMBL
  B7ZWL5_MOUSE UniProtKB/TrEMBL
  D3Z2K6_MOUSE UniProtKB/TrEMBL
  E9Q9L6 ENTREZGENE, UniProtKB/TrEMBL
  F6VTL9_MOUSE UniProtKB/TrEMBL
  F6ZZB1_MOUSE UniProtKB/TrEMBL
  F7CGQ9_MOUSE UniProtKB/TrEMBL
  NBEL2_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8BTE2_MOUSE UniProtKB/TrEMBL