Rnd3 (Rho family GTPase 3) - Rat Genome Database

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Gene: Rnd3 (Rho family GTPase 3) Mus musculus
Analyze
Symbol: Rnd3
Name: Rho family GTPase 3
RGD ID: 1551418
MGI Page MGI
Description: Predicted to enable GTP binding activity; GTPase activity; and protein kinase binding activity. Predicted to be involved in several processes, including actin filament organization; regulation of actin cytoskeleton organization; and signal transduction. Predicted to be located in Golgi membrane. Predicted to be active in cytosol and plasma membrane. Is expressed in several structures, including cardiovascular system; central nervous system; genitourinary system; liver; and retina. Orthologous to human RND3 (Rho family GTPase 3).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 2610017M01Rik; AI661404; Ar; Arhe; ras homolog gene family, member E; Rh; rho-related GTP-binding protein RhoE; Rhoe
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39251,020,451 - 51,039,123 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl251,020,450 - 51,039,123 (-)EnsemblGRCm39 Ensembl
GRCm38251,130,439 - 51,149,111 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl251,130,438 - 51,149,111 (-)EnsemblGRCm38mm10GRCm38
MGSCv37250,985,959 - 51,004,631 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36250,952,448 - 50,971,120 (-)NCBIMGSCv36mm8
Celera252,814,575 - 52,833,308 (-)NCBICelera
Cytogenetic Map2C1.1NCBI
cM Map229.63NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(S)-nicotine  (ISO)
1,1-dichloroethene  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-nitropyrene  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2,6-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-methylcholanthrene  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4-vinylcyclohexene dioxide  (EXP)
6-propyl-2-thiouracil  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
amphetamine  (ISO)
amphotericin B  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (EXP)
arsenous acid  (ISO)
atrazine  (ISO)
azoxystrobin  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-lapachone  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
bortezomib  (ISO)
butan-1-ol  (ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
cannabidiol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chloroacetaldehyde  (ISO)
chloropicrin  (ISO)
chloroprene  (EXP)
chlorpromazine  (ISO)
chlorpyrifos  (ISO)
cidofovir anhydrous  (ISO)
ciguatoxin CTX1B  (EXP)
cisplatin  (EXP)
clodronic acid  (ISO)
cobalt dichloride  (ISO)
cocaine  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
corosolic acid  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
cyproconazole  (ISO)
diallyl trisulfide  (ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
dibutyl phthalate  (EXP,ISO)
dieldrin  (ISO)
dimethylarsinous acid  (ISO)
dioxygen  (EXP,ISO)
diquat  (ISO)
dorsomorphin  (ISO)
elemental selenium  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
ethyl methanesulfonate  (ISO)
fenofibrate  (ISO)
fluoranthene  (EXP)
folic acid  (EXP)
formaldehyde  (ISO)
gentamycin  (ISO)
glycidol  (ISO)
glyphosate  (ISO)
imidacloprid  (ISO)
isotretinoin  (ISO)
ketamine  (ISO)
lead(0)  (ISO)
lithium chloride  (ISO)
mercury dibromide  (ISO)
mercury dichloride  (ISO)
metformin  (ISO)
methapyrilene  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
methylseleninic acid  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
nickel dichloride  (ISO)
nicotine  (ISO)
oxaliplatin  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP,ISO)
phenylmercury acetate  (ISO)
PhIP  (ISO)
pirinixic acid  (EXP,ISO)
piroxicam  (ISO)
progesterone  (ISO)
quinomethionate  (ISO)
rac-lactic acid  (ISO)
raloxifene  (ISO)
SB 203580  (EXP)
SB 431542  (ISO)
selenium atom  (ISO)
silicon dioxide  (ISO)
SL-327  (EXP)
sodium arsenite  (ISO)
Soman  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloro-1,4-benzoquinone  (ISO)
tetrachloromethane  (EXP)
thiabendazole  (ISO)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
trichostatin A  (ISO)
troglitazone  (ISO)
trovafloxacin  (EXP)
tunicamycin  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
vitamin E  (ISO)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. RhoE inhibits cell cycle progression and Ras-induced transformation. Villalonga P, etal., Mol Cell Biol 2004 Sep;24(18):7829-40.
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:12009891   PMID:12477932   PMID:12773565   PMID:14610273   PMID:15489334   PMID:15582152   PMID:15775972   PMID:16107646   PMID:16141072  
PMID:16141073   PMID:16602821   PMID:18369372   PMID:18946488   PMID:19349584   PMID:19589369   PMID:19850923   PMID:20811643   PMID:21435554   PMID:21552537   PMID:21873635   PMID:22357615  
PMID:22428561   PMID:23431145   PMID:23535656   PMID:23622247   PMID:23630292   PMID:24194600   PMID:24284899   PMID:24525741   PMID:24572910   PMID:24901055   PMID:25025691   PMID:25270035  
PMID:25348166   PMID:26036260   PMID:26655900   PMID:26781283   PMID:27555595   PMID:27626380   PMID:29207629   PMID:30553270   PMID:30586715   PMID:31812516   PMID:32325033   PMID:32707082  
PMID:33416158   PMID:33576044   PMID:34321999   PMID:34724108   PMID:36438502   PMID:37743632   PMID:38355793   PMID:38482696   PMID:38744409  


Genomics

Comparative Map Data
Rnd3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39251,020,451 - 51,039,123 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl251,020,450 - 51,039,123 (-)EnsemblGRCm39 Ensembl
GRCm38251,130,439 - 51,149,111 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl251,130,438 - 51,149,111 (-)EnsemblGRCm38mm10GRCm38
MGSCv37250,985,959 - 51,004,631 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36250,952,448 - 50,971,120 (-)NCBIMGSCv36mm8
Celera252,814,575 - 52,833,308 (-)NCBICelera
Cytogenetic Map2C1.1NCBI
cM Map229.63NCBI
RND3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382150,468,193 - 150,487,695 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2150,468,195 - 150,539,011 (-)EnsemblGRCh38hg38GRCh38
GRCh372151,324,707 - 151,344,209 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362151,032,955 - 151,052,426 (-)NCBINCBI36Build 36hg18NCBI36
Build 342151,150,216 - 151,169,688NCBI
Celera2144,938,960 - 144,958,449 (-)NCBICelera
Cytogenetic Map2q23.3NCBI
HuRef2143,221,253 - 143,240,784 (-)NCBIHuRef
CHM1_12151,330,489 - 151,349,997 (-)NCBICHM1_1
T2T-CHM13v2.02150,918,573 - 150,938,077 (-)NCBIT2T-CHM13v2.0
Rnd3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8355,981,142 - 55,998,494 (-)NCBIGRCr8
mRatBN7.2335,571,929 - 35,589,283 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl335,571,143 - 35,589,327 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx338,969,914 - 38,987,277 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0347,554,663 - 47,572,026 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0345,332,304 - 45,350,239 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0336,643,374 - 36,660,727 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl336,642,587 - 36,660,758 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0341,757,186 - 41,774,539 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4332,101,433 - 32,118,785 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1331,997,804 - 32,015,157 (-)NCBI
Celera333,730,327 - 33,747,679 (-)NCBICelera
Cytogenetic Map3q12NCBI
Rnd3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495544016,106,555 - 16,113,337 (-)NCBIChiLan1.0ChiLan1.0
RND3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21324,453,723 - 24,473,246 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B24,468,716 - 24,488,201 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B9,387,338 - 9,406,785 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B154,813,235 - 154,832,768 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B154,810,039 - 154,832,768 (-)Ensemblpanpan1.1panPan2
RND3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11951,889,693 - 51,909,028 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1951,891,494 - 51,909,033 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1952,002,669 - 52,022,012 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01953,352,354 - 53,372,496 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1953,352,356 - 53,373,467 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11952,048,081 - 52,066,346 (-)NCBIUMICH_Zoey_3.1
UMICH_Zoey_3.11952,034,519 - 52,038,409 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01952,130,759 - 52,149,808 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01953,545,000 - 53,564,447 (-)NCBIUU_Cfam_GSD_1.0
Rnd3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303114,618,761 - 114,636,348 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646926,981,318 - 27,000,739 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493646926,981,358 - 26,998,902 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RND3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl151,715,207 - 1,734,414 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1151,715,589 - 1,732,605 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215999,583 - 1,008,986 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RND3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11035,877,147 - 35,897,318 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1035,877,153 - 35,897,286 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040163,652,947 - 163,672,492 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rnd3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248663,345,774 - 3,364,345 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248663,346,747 - 3,363,962 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1800
Count of miRNA genes:714
Interacting mature miRNAs:925
Transcripts:ENSMUST00000017288, ENSMUST00000140864, ENSMUST00000154545
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552707Cia23_mcollagen induced arthritis QTL 23 (mouse)Not determined21212953766556453Mouse
12904005Cfq2_mconditioned fear QTL 2 (mouse)22702264256396228Mouse
14746979Manh51_mmandible shape 51 (mouse)22896112962961129Mouse
1301402Ap2q_malcohol preference 2 QTL (mouse)Not determined24352061277520756Mouse
4142133Pbwg1.6_mpostnatal body weight growth 1.6 (mouse)Not determined3579732469797406Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
4142130Pgis2_mproteoglycan induced spondylitis 2 (mouse)Not determined22530805156971811Mouse
1301376Etohc1_methanol consumption 1 (mouse)Not determined22112972555129871Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
14746997Mancz2_mmandible centroid size 2 (mouse)22896112962961129Mouse
1300875Taste1_mtaste-saccharin preference 1 (mouse)Not determined25092317584923278Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
1300788Cia2_mcollagen induced arthritis QTL 2 (mouse)Not determined24352061277520756Mouse
1300671Cia4_mcollagen induced arthritis QTL 4 (mouse)Not determined24352061277520756Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1301411Pitm1_mprion incubation time 1 (mouse)Not determined24352061277520756Mouse
4141069Pbwg1.5_mpostnatal body weight growth 1.5 (mouse)Not determined4352061277520756Mouse
1558820Moo1_mmodifier of Odc1 (mouse)Not determined174826974682269934Mouse
4141708Pbwg1.2_mpostnatal body weight growth 1.2 (mouse)Not determined2112972555129871Mouse
1300645Alcp1_malcohol preference locus 1 (mouse)Not determined24522812867838868Mouse
4141186Pbwg1.8_mpostnatal body weight growth 1.8 (mouse)Not determined3579732469797406Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
11038703Ltpr1_mLeishmania tropica response 1 (mouse)23997166573971811Mouse
1300568Hdl1_mhigh density lipoprotein (HDL) level 1 (mouse)Not determined24826974682269934Mouse
26884438Sklq12_mskull length QTL 12, 16 week (mouse)22459001254890012Mouse
1559001Eae33_mexperimental allergic encephalomyelitis susceptibility 33 (mouse)Not determined23599167971609412Mouse
4142447Pbwg1.7_mpostnatal body weight growth 1.7 (mouse)Not determined3579732469797406Mouse
1301747Eae21_mexperimental allergic encephalomyelitis 21 (mouse)Not determined24826974682269934Mouse
1301235Alcw4_malcohol withdrawal 4 (mouse)Not determined24826974682269934Mouse
10449151Hdl8_mhigh density lipoprotein (HDL) level 8 (mouse)23812972567072607Mouse
10449150Pvldlc1_mplasma VLDL-cholesterol 1 (mouse)23812972567072607Mouse
10755526Lymph1_mlymphocyte differential 1 (mouse)25081931484819314Mouse
13463470Tubisq1_mtubulointerstitial injury severity, QTL 1 (mouse)22368914557689269Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1301109Dntcs2_mdental caries susceptibility 2 (mouse)Not determined240885493114910165Mouse
10449145Lanq1_mlanosterol level QTL 1 (mouse)23812972567072607Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
10755532Lymph5_mlymphocyte differential 5 (mouse)24419901778199017Mouse
11532740Pbwg1.10_mpostnatal body weight growth 1.10 (mouse)24813241282132495Mouse
13464253Ifvrq1_minfluenza virus resistance QTL 1 (mouse)23303449252034492Mouse
1300577Capsq1_mcapsaicin sensitivity related QTL 1 (mouse)Not determined22760206084013384Mouse
1301344Lith1_mlithogenic gene 1 (mouse)Not determined245347635145312647Mouse
1301480Pbwg1_mpostnatal body weight growth 1 (mouse)Not determined24182071975820843Mouse

Markers in Region
RH143020  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38251,131,412 - 51,131,667UniSTSGRCm38
MGSCv37250,986,932 - 50,987,187UniSTSGRCm37
Celera252,815,544 - 52,815,799UniSTS
Cytogenetic Map2C1.1UniSTS
UniSTS:234388  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38251,143,169 - 51,143,429UniSTSGRCm38
MGSCv37250,998,689 - 50,998,949UniSTSGRCm37
Celera252,827,329 - 52,827,589UniSTS
Cytogenetic Map2C1.1UniSTS
AI661404  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38251,131,598 - 51,131,704UniSTSGRCm38
MGSCv37250,987,118 - 50,987,224UniSTSGRCm37
Celera252,815,730 - 52,815,836UniSTS
Cytogenetic Map2C1.1UniSTS
Whitehead/MRC_RH2829.95UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000017288   ⟹   ENSMUSP00000017288
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl251,020,450 - 51,039,123 (-)Ensembl
GRCm38.p6 Ensembl251,130,438 - 51,149,111 (-)Ensembl
Ensembl Acc Id: ENSMUST00000140864
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl251,027,081 - 51,039,106 (-)Ensembl
GRCm38.p6 Ensembl251,137,069 - 51,149,094 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154545   ⟹   ENSMUSP00000128831
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl251,021,847 - 51,039,122 (-)Ensembl
GRCm38.p6 Ensembl251,131,835 - 51,149,110 (-)Ensembl
RefSeq Acc Id: NM_028810   ⟹   NP_083086
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39251,020,451 - 51,039,123 (-)NCBI
GRCm38251,130,439 - 51,149,111 (-)ENTREZGENE
MGSCv37250,985,959 - 51,004,631 (-)RGD
Celera252,814,575 - 52,833,308 (-)RGD
cM Map2 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_083086 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH09002 (Get FASTA)   NCBI Sequence Viewer  
  BAB27622 (Get FASTA)   NCBI Sequence Viewer  
  BAC28975 (Get FASTA)   NCBI Sequence Viewer  
  EDL26891 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000017288
  ENSMUSP00000017288.3
  ENSMUSP00000128831.2
GenBank Protein P61588 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_083086   ⟸   NM_028810
- UniProtKB: Q6ZWS2 (UniProtKB/Swiss-Prot),   P61588 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000017288   ⟸   ENSMUST00000017288
Ensembl Acc Id: ENSMUSP00000128831   ⟸   ENSMUST00000154545

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P61588-F1-model_v2 AlphaFold P61588 1-244 view protein structure

Promoters
RGD ID:6832318
Promoter ID:MM_KWN:29171
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000029556,   OTTMUST00000029558,   UC008JQG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36251,004,384 - 51,004,884 (-)MPROMDB
RGD ID:6877288
Promoter ID:EPDNEW_M2095
Type:multiple initiation site
Name:Rnd3_1
Description:Mus musculus Rho family GTPase 3 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38251,149,107 - 51,149,167EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1921444 AgrOrtholog
Ensembl Genes ENSMUSG00000017144 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000017288 ENTREZGENE
  ENSMUST00000017288.9 UniProtKB/Swiss-Prot
  ENSMUST00000154545.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoE UniProtKB/Swiss-Prot
  Small_GTP-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Small_GTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Small_GTPase_Rho UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:74194 UniProtKB/Swiss-Prot
MGD MGI:1921444 ENTREZGENE
NCBI Gene 74194 ENTREZGENE
PANTHER PTHR24072 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RHO-RELATED GTP-BINDING PROTEIN RHOE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ras UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Rnd3 PhenoGen
PRINTS RASTRNSFRMNG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE RAB UniProtKB/TrEMBL
  RHO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART RAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RAS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RHO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt E9Q8D7_MOUSE UniProtKB/TrEMBL
  P61588 ENTREZGENE
  Q6ZWS2 ENTREZGENE
  RND3_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary P52199 UniProtKB/Swiss-Prot
  Q6ZWS2 UniProtKB/Swiss-Prot