Slc25a19 (solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19) - Rat Genome Database

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Gene: Slc25a19 (solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19) Mus musculus
Analyze
Symbol: Slc25a19
Name: solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
RGD ID: 1551315
MGI Page MGI
Description: Enables thiamine pyrophosphate transmembrane transporter activity. Involved in thiamine diphosphate biosynthetic process. Located in mitochondrion. Is active in mitochondrial inner membrane. Is expressed in central nervous system; embryo; retina inner nuclear layer; retina layer; and retina outer nuclear layer. Human ortholog(s) of this gene implicated in inherited metabolic disorder and microcephaly. Orthologous to human SLC25A19 (solute carrier family 25 member 19).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2900089E13Rik; DN; DNC; mitochondrial thiamine pyrophosphate carrier; MUP; MUP1; solute carrier family 25 (mitochondrial deoxynucleotide carrier), member 19; solute carrier family 25 member 19; TP; TPC
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911115,504,991 - 115,519,122 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11115,505,004 - 115,519,121 (-)EnsemblGRCm39 Ensembl
GRCm3811115,614,165 - 115,628,296 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11115,614,178 - 115,628,295 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711115,476,297 - 115,489,453 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611115,431,073 - 115,444,229 (-)NCBIMGSCv36mm8
Celera11127,382,733 - 127,395,903 (-)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1180.91NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Mutant deoxynucleotide carrier is associated with congenital microcephaly. Rosenberg MJ, etal., Nat Genet. 2002 Sep;32(1):175-9. Epub 2002 Aug 19.
Additional References at PubMed
PMID:8186267   PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12904583   PMID:14610273   PMID:14651853   PMID:14681479   PMID:15226823  
PMID:15489334   PMID:15782199   PMID:15951836   PMID:16141072   PMID:16141073   PMID:16602821   PMID:17035501   PMID:17967808   PMID:18280798   PMID:18614015   PMID:18799693   PMID:21267068  
PMID:21873635   PMID:26316591   PMID:31138677  


Genomics

Comparative Map Data
Slc25a19
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911115,504,991 - 115,519,122 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11115,505,004 - 115,519,121 (-)EnsemblGRCm39 Ensembl
GRCm3811115,614,165 - 115,628,296 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11115,614,178 - 115,628,295 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711115,476,297 - 115,489,453 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611115,431,073 - 115,444,229 (-)NCBIMGSCv36mm8
Celera11127,382,733 - 127,395,903 (-)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1180.91NCBI
SLC25A19
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381775,272,992 - 75,289,433 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1775,272,981 - 75,289,510 (-)EnsemblGRCh38hg38GRCh38
GRCh371773,269,073 - 73,285,514 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361770,780,669 - 70,797,109 (-)NCBINCBI36Build 36hg18NCBI36
Build 341770,780,668 - 70,797,109NCBI
Celera1769,861,413 - 69,877,887 (-)NCBICelera
Cytogenetic Map17q25.1NCBI
HuRef1768,679,265 - 68,696,066 (-)NCBIHuRef
CHM1_11773,333,658 - 73,350,100 (-)NCBICHM1_1
T2T-CHM13v2.01776,165,078 - 76,181,525 (-)NCBIT2T-CHM13v2.0
Slc25a19
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810101,353,426 - 101,366,551 (-)NCBIGRCr8
mRatBN7.210100,853,554 - 100,867,517 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10100,847,168 - 100,867,447 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx10105,914,684 - 105,927,637 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010105,377,757 - 105,390,710 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.010100,775,447 - 100,788,372 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.010104,166,594 - 104,179,523 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10104,166,598 - 104,179,523 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010104,101,681 - 104,114,610 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410105,694,526 - 105,707,452 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.110105,709,029 - 105,721,956 (-)NCBI
Celera1099,428,914 - 99,441,839 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
Slc25a19
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555532,134,715 - 2,160,777 (-)NCBIChiLan1.0ChiLan1.0
SLC25A19
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21991,312,529 - 91,329,536 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11796,135,619 - 96,152,601 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01769,220,073 - 69,237,067 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11774,773,341 - 74,789,700 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1774,773,341 - 74,789,699 (-)Ensemblpanpan1.1panPan2
SLC25A19
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.195,208,982 - 5,226,925 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl95,209,059 - 5,226,569 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha95,888,236 - 5,905,909 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.095,879,063 - 5,896,973 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl95,879,117 - 5,896,971 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.195,917,854 - 5,935,745 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.096,028,083 - 6,045,961 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.096,087,988 - 6,105,697 (+)NCBIUU_Cfam_GSD_1.0
Slc25a19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244056025,841,303 - 5,854,135 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936594557,823 - 570,599 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A19
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl126,033,669 - 6,046,763 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1126,033,605 - 6,045,435 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2125,824,120 - 5,835,897 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A19
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11646,380,665 - 46,403,532 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1646,381,271 - 46,403,360 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607717,150,051 - 17,169,518 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a19
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248015,086,925 - 5,114,171 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc25a19
474 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2741
Count of miRNA genes:714
Interacting mature miRNAs:904
Transcripts:ENSMUST00000021089, ENSMUST00000106503, ENSMUST00000129194, ENSMUST00000134171, ENSMUST00000135552, ENSMUST00000140539, ENSMUST00000141614, ENSMUST00000144083, ENSMUST00000150898, ENSMUST00000154623, ENSMUST00000155709, ENSMUST00000178003
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191604608121973369Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1301072Eae22_mexperimental allergic encephalomyelitis 22 (mouse)Not determined1182377698116377820Mouse
1300944Alcp20_malcohol preference locus 20 (mouse)Not determined1195403965121973369Mouse
1301012Vispl_mvisual placing (mouse)Not determined11101022590121973369Mouse
4141939Pregq2_mpregnancy QTL 2 (mouse)Not determined1194063779118022724Mouse
1301983Berr2_mberghei resistance locus 2 (mouse)Not determined1198352609121973369Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181574481115574636Mouse
10043976Obq33_mobesity QTL 33 (mouse)Not determined1198500469121973369Mouse
1301057Nidd4_mnon-insulin-dependent diabetes mellitus 4 (mouse)Not determined1196810136121973369Mouse
1301958Alcp18_malcohol preference locus 18 (mouse)Not determined1195403965121973369Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185844911119844911Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181810267115810267Mouse
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189869251121973369Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186608320120608320Mouse
4141465Dbm2_mdiabetes modifier 2 (mouse)Not determined94437183118022724Mouse
15039374Adip29_madiposity 29 (mouse)1186608320120608320Mouse
1300962Cd8mts4_mCD8 memory T cell subset 4 (mouse)Not determined1196137674121973369Mouse
1301095El6_mepilepsy 6 (mouse)Not determined1193229183121973369Mouse
27226731Tibmd4_mtibia midshaft diameter 4, 10 week (mouse)1194190826118890826Mouse
11341721Rvfs2_mRift Valley fever susceptibility 2 (mouse)11100254186120887165Mouse
15039376Bw42_mbody weight QTL 42 (mouse)1186608320120608320Mouse
1558753Ath19_matherosclerosis 19 (mouse)Not determined1191604608121973369Mouse
10044001Alcw8_malcohol withdrawal 8 (mouse)Not determined1199254187121973369Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181574481115574636Mouse
27226789Feml16_mfemur length 16, 10 week (mouse)1187490826121873369Mouse
11553867Stmm5_mskin tumor modifier of MSM 5 (mouse)11100058103121973369Mouse
10044007Hbnr14_mHeligmosomoides bakeri nematode resistance 14 (mouse)Not determined1187502600121502698Mouse

Markers in Region
UniSTS:236777  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811115,614,368 - 115,614,600UniSTSGRCm38
MGSCv3711115,475,682 - 115,475,914UniSTSGRCm37
Celera11127,382,113 - 127,382,350UniSTS
Cytogenetic Map11E2UniSTS
Slc25a19  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11E2UniSTS
cM Map1180.91UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001252384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_026071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030246245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK005710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL645470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL732491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV155885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC046767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI736130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY276424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA322885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF584740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF730205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX241396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000021089   ⟹   ENSMUSP00000021089
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11115,505,004 - 115,518,971 (-)Ensembl
GRCm38.p6 Ensembl11115,614,178 - 115,628,145 (-)Ensembl
Ensembl Acc Id: ENSMUST00000106503   ⟹   ENSMUSP00000102112
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11115,506,020 - 115,518,919 (-)Ensembl
GRCm38.p6 Ensembl11115,615,194 - 115,628,093 (-)Ensembl
Ensembl Acc Id: ENSMUST00000129194
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11115,507,375 - 115,508,731 (-)Ensembl
GRCm38.p6 Ensembl11115,616,549 - 115,617,905 (-)Ensembl
Ensembl Acc Id: ENSMUST00000134171
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11115,514,703 - 115,519,107 (-)Ensembl
GRCm38.p6 Ensembl11115,623,877 - 115,628,281 (-)Ensembl
Ensembl Acc Id: ENSMUST00000135552   ⟹   ENSMUSP00000114566
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11115,506,266 - 115,513,651 (-)Ensembl
GRCm38.p6 Ensembl11115,615,440 - 115,622,825 (-)Ensembl
Ensembl Acc Id: ENSMUST00000140539
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11115,514,238 - 115,518,938 (-)Ensembl
GRCm38.p6 Ensembl11115,623,412 - 115,628,112 (-)Ensembl
Ensembl Acc Id: ENSMUST00000141614   ⟹   ENSMUSP00000120390
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11115,515,025 - 115,518,938 (-)Ensembl
GRCm38.p6 Ensembl11115,624,199 - 115,628,112 (-)Ensembl
Ensembl Acc Id: ENSMUST00000144083
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11115,508,488 - 115,518,933 (-)Ensembl
GRCm38.p6 Ensembl11115,617,662 - 115,628,107 (-)Ensembl
Ensembl Acc Id: ENSMUST00000150898
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11115,513,833 - 115,518,932 (-)Ensembl
GRCm38.p6 Ensembl11115,623,007 - 115,628,106 (-)Ensembl
Ensembl Acc Id: ENSMUST00000154623   ⟹   ENSMUSP00000116005
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11115,515,046 - 115,518,774 (-)Ensembl
GRCm38.p6 Ensembl11115,624,220 - 115,627,948 (-)Ensembl
Ensembl Acc Id: ENSMUST00000155709   ⟹   ENSMUSP00000115742
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11115,515,101 - 115,518,956 (-)Ensembl
GRCm38.p6 Ensembl11115,624,275 - 115,628,130 (-)Ensembl
Ensembl Acc Id: ENSMUST00000178003   ⟹   ENSMUSP00000137534
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11115,505,010 - 115,519,121 (-)Ensembl
GRCm38.p6 Ensembl11115,614,184 - 115,628,295 (-)Ensembl
RefSeq Acc Id: NM_001252384   ⟹   NP_001239313
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911115,505,007 - 115,519,121 (-)NCBI
GRCm3811115,614,181 - 115,628,295 (-)NCBI
Celera11127,381,926 - 127,396,059 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252394   ⟹   NP_001239323
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911115,505,007 - 115,519,121 (-)NCBI
GRCm3811115,614,181 - 115,628,295 (-)NCBI
Celera11127,381,926 - 127,396,059 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252395   ⟹   NP_001239324
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911115,505,007 - 115,519,121 (-)NCBI
GRCm3811115,614,181 - 115,628,295 (-)NCBI
Celera11127,381,926 - 127,396,059 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252396   ⟹   NP_001239325
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911115,505,007 - 115,519,121 (-)NCBI
GRCm3811115,614,181 - 115,628,295 (-)NCBI
Celera11127,381,926 - 127,396,059 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_026071   ⟹   NP_080347
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911115,505,007 - 115,519,121 (-)NCBI
GRCm3811115,614,181 - 115,628,295 (-)NCBI
MGSCv3711115,476,297 - 115,489,453 (-)RGD
Celera11127,381,926 - 127,396,059 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006533979   ⟹   XP_006534042
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911115,504,996 - 115,519,102 (-)NCBI
GRCm3811115,614,170 - 115,628,276 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249183   ⟹   XP_011247485
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911115,504,991 - 115,519,122 (-)NCBI
GRCm3811115,614,165 - 115,628,296 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314714   ⟹   XP_017170203
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911115,504,996 - 115,519,102 (-)NCBI
GRCm3811115,614,170 - 115,628,276 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246244   ⟹   XP_030102104
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911115,504,991 - 115,519,102 (-)NCBI
GRCm3811115,614,165 - 115,628,276 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030246245   ⟹   XP_030102105
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911115,504,991 - 115,518,218 (-)NCBI
GRCm3811115,614,165 - 115,627,392 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156902   ⟹   XP_036012795
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911115,504,991 - 115,519,102 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156903   ⟹   XP_036012796
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911115,504,991 - 115,519,108 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156904   ⟹   XP_036012797
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911115,504,991 - 115,519,118 (-)NCBI
Sequence:
RefSeq Acc Id: NP_080347   ⟸   NM_026071
- Peptide Label: isoform 1
- UniProtKB: A2A9V6 (UniProtKB/Swiss-Prot),   Q3T9C4 (UniProtKB/Swiss-Prot),   Q9DAM5 (UniProtKB/Swiss-Prot),   Q80XJ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239325   ⟸   NM_001252396
- Peptide Label: isoform 4
- UniProtKB: Q80XJ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239323   ⟸   NM_001252394
- Peptide Label: isoform 2
- UniProtKB: A2A9V5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239324   ⟸   NM_001252395
- Peptide Label: isoform 3
- UniProtKB: A2A9V7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239313   ⟸   NM_001252384
- Peptide Label: isoform 1
- UniProtKB: A2A9V6 (UniProtKB/Swiss-Prot),   Q3T9C4 (UniProtKB/Swiss-Prot),   Q9DAM5 (UniProtKB/Swiss-Prot),   Q80XJ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006534042   ⟸   XM_006533979
- Peptide Label: isoform X1
- UniProtKB: A2A9V6 (UniProtKB/Swiss-Prot),   Q3T9C4 (UniProtKB/Swiss-Prot),   Q9DAM5 (UniProtKB/Swiss-Prot),   Q80XJ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011247485   ⟸   XM_011249183
- Peptide Label: isoform X3
- UniProtKB: A2A9V7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017170203   ⟸   XM_017314714
- Peptide Label: isoform X1
- UniProtKB: A2A9V6 (UniProtKB/Swiss-Prot),   Q3T9C4 (UniProtKB/Swiss-Prot),   Q9DAM5 (UniProtKB/Swiss-Prot),   Q80XJ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030102104   ⟸   XM_030246244
- Peptide Label: isoform X2
- UniProtKB: A2A9V5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102105   ⟸   XM_030246245
- Peptide Label: isoform X3
- UniProtKB: A2A9V7 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000137534   ⟸   ENSMUST00000178003
Ensembl Acc Id: ENSMUSP00000102112   ⟸   ENSMUST00000106503
Ensembl Acc Id: ENSMUSP00000114566   ⟸   ENSMUST00000135552
Ensembl Acc Id: ENSMUSP00000116005   ⟸   ENSMUST00000154623
Ensembl Acc Id: ENSMUSP00000021089   ⟸   ENSMUST00000021089
Ensembl Acc Id: ENSMUSP00000115742   ⟸   ENSMUST00000155709
Ensembl Acc Id: ENSMUSP00000120390   ⟸   ENSMUST00000141614
RefSeq Acc Id: XP_036012797   ⟸   XM_036156904
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036012796   ⟸   XM_036156903
- Peptide Label: isoform X3
- UniProtKB: A2A9V7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036012795   ⟸   XM_036156902
- Peptide Label: isoform X1
- UniProtKB: Q9DAM5 (UniProtKB/Swiss-Prot),   A2A9V6 (UniProtKB/Swiss-Prot),   Q3T9C4 (UniProtKB/Swiss-Prot),   Q80XJ6 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9DAM5-F1-model_v2 AlphaFold Q9DAM5 1-318 view protein structure

Promoters
RGD ID:6822127
Promoter ID:MM_KWN:10553
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:OTTMUST00000007434
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611115,483,996 - 115,485,057 (-)MPROMDB
RGD ID:6822119
Promoter ID:MM_KWN:10554
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000106503,   OTTMUST00000007425,   OTTMUST00000007426,   OTTMUST00000007427,   OTTMUST00000007428,   OTTMUST00000007429,   OTTMUST00000007430,   OTTMUST00000007431,   OTTMUST00000007432
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611115,489,304 - 115,489,804 (-)MPROMDB
RGD ID:8677370
Promoter ID:EPDNEW_M16716
Type:multiple initiation site
Name:Slc25a19_2
Description:Mus musculus solute carrier family 25 , member 19 , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M16717  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3811115,628,110 - 115,628,170EPDNEW
RGD ID:8677372
Promoter ID:EPDNEW_M16717
Type:multiple initiation site
Name:Slc25a19_1
Description:Mus musculus solute carrier family 25 , member 19 , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M16716  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3811115,628,268 - 115,628,328EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914533 AgrOrtholog
Ensembl Genes ENSMUSG00000020744 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000021089 ENTREZGENE
  ENSMUST00000021089.11 UniProtKB/Swiss-Prot
  ENSMUST00000106503 ENTREZGENE
  ENSMUST00000106503.10 UniProtKB/TrEMBL
  ENSMUST00000135552 ENTREZGENE
  ENSMUST00000135552.2 UniProtKB/TrEMBL
  ENSMUST00000141614.3 UniProtKB/TrEMBL
  ENSMUST00000154623.2 UniProtKB/TrEMBL
  ENSMUST00000155709.2 UniProtKB/TrEMBL
  ENSMUST00000178003 ENTREZGENE
  ENSMUST00000178003.8 UniProtKB/Swiss-Prot
Gene3D-CATH 1.50.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Mit_carrier UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mitochondrial_sb/sol_carrier UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67283 UniProtKB/Swiss-Prot
MGD MGI:1914533 ENTREZGENE
NCBI Gene 67283 ENTREZGENE
PANTHER MITOCHONDRIAL THIAMINE PYROPHOSPHATE CARRIER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOLUTE CARRIER FAMILY 25 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Mito_carr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slc25a19 PhenoGen
PRINTS MITOCARRIER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE SOLCAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2A9V2_MOUSE UniProtKB/TrEMBL
  A2A9V3_MOUSE UniProtKB/TrEMBL
  A2A9V4_MOUSE UniProtKB/TrEMBL
  A2A9V5 ENTREZGENE, UniProtKB/TrEMBL
  A2A9V6 ENTREZGENE
  A2A9V7 ENTREZGENE, UniProtKB/TrEMBL
  Q3T9C4 ENTREZGENE
  Q80XJ6 ENTREZGENE, UniProtKB/TrEMBL
  Q9DAM5 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary A2A9V6 UniProtKB/Swiss-Prot
  Q3T9C4 UniProtKB/Swiss-Prot