Synrg (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 11 | 83,855,217 - 83,935,404 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 83,855,254 - 83,935,404 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 83,964,390 - 84,044,578 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 83,964,428 - 84,044,578 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 83,777,930 - 83,855,591 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 83,780,666 - 83,858,284 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 93,569,471 - 93,647,214 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | C | NCBI | | | | | cM Map | 11 | 51.25 | NCBI | | | | |
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SYNRG (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 17 | 37,514,807 - 37,609,418 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 17 | 37,514,807 - 37,609,472 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 17 | 35,874,910 - 35,969,466 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 17 | 32,952,046 - 33,043,559 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 17 | 32,952,045 - 33,043,559 | NCBI | | | | | Celera | 17 | 32,697,883 - 32,792,525 (-) | NCBI | | Celera | | | Cytogenetic Map | 17 | q12 | NCBI | | | | | HuRef | 17 | 31,812,168 - 31,906,906 (-) | NCBI | | HuRef | | | CHM1_1 | 17 | 35,906,360 - 36,001,001 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 17 | 38,501,491 - 38,596,398 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Synrg (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 10 | 69,346,154 - 69,428,714 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 68,848,828 - 68,931,252 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 68,849,642 - 68,931,250 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 10 | 73,469,676 - 73,550,565 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 10 | 72,974,685 - 73,055,576 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 10 | 68,439,105 - 68,519,999 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 10 | 71,278,698 - 71,357,791 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 70,890,012 - 70,927,522 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Rnor_5.0 | 10 | 71,230,888 - 71,271,499 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 10 | 72,247,720 - 72,330,036 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 10 | 72,262,041 - 72,309,447 (+) | NCBI | | | | | Celera | 10 | 67,788,307 - 67,860,055 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q26 | NCBI | | | | |
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Synrg (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955451 | 438,904 - 510,136 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955451 | 439,205 - 510,675 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SYNRG (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 19 | 27,144,606 - 27,237,649 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 17 | 29,028,037 - 29,121,039 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 17 | 19,467,539 - 19,560,618 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 17 | 19,768,062 - 19,860,323 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 17 | 19,768,058 - 19,860,323 (+) | Ensembl | panpan1.1 | | panPan2 | |
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SYNRG (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 9 | 37,280,620 - 37,365,477 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 37,280,645 - 37,366,116 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 36,505,186 - 36,589,564 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 38,091,575 - 38,176,008 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 38,091,575 - 38,176,037 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 36,872,387 - 36,956,768 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 37,159,961 - 37,244,338 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 37,246,724 - 37,331,356 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Synrg (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SYNRG (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 12 | 38,975,916 - 39,069,798 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 12 | 38,974,567 - 39,069,868 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 12 | 40,620,317 - 40,711,486 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SYNRG (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 16 | 30,171,704 - 30,265,143 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 16 | 30,181,431 - 30,264,981 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666077 | 893,668 - 991,044 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Synrg (Heterocephalus glaber - naked mole-rat) |
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