Fut8 (fucosyltransferase 8) - Rat Genome Database

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Gene: Fut8 (fucosyltransferase 8) Mus musculus
Analyze
Symbol: Fut8
Name: fucosyltransferase 8
RGD ID: 1550689
MGI Page MGI
Description: Enables alpha-(1->6)-fucosyltransferase activity. Acts upstream of or within several processes, including N-glycan fucosylation; cell surface receptor signaling pathway; and fibroblast migration. Predicted to be located in Golgi cisterna membrane. Is expressed in telencephalon. Used to study pulmonary emphysema. Orthologous to human FUT8 (fucosyltransferase 8).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: alpha (1,6) fucosyltransferase; alpha-(1,6)-fucosyltransferase; alpha-1,6-fucosyltransferase; alpha1-6FucT; GDP-fucose--glycoprotein fucosyltransferase; GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha1,6-fucosyltransferase; glycoprotein 6-alpha-L-fucosyltransferase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391277,284,878 - 77,522,770 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1277,284,899 - 77,523,112 (+)EnsemblGRCm39 Ensembl
GRCm381277,237,430 - 77,475,998 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1277,238,125 - 77,476,338 (+)EnsemblGRCm38mm10GRCm38
MGSCv371278,340,008 - 78,576,974 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361278,157,861 - 78,394,827 (+)NCBIMGSCv36mm8
Celera1278,319,280 - 78,556,375 (+)NCBICelera
Cytogenetic Map12C3NCBI
cM Map1235.46NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-diaminotoluene  (EXP)
2,4-dinitrotoluene  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methylcholanthrene  (EXP)
4,4'-sulfonyldiphenol  (ISO)
acetamide  (ISO)
afimoxifene  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
caffeine  (ISO)
calcitriol  (ISO)
carmustine  (ISO)
chlordecone  (EXP)
choline  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
cocaine  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (EXP)
dibenzo[a,l]pyrene  (ISO)
diethyl pyrocarbonate  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
etoposide  (ISO)
folic acid  (EXP)
fucose  (ISO)
fulvestrant  (ISO)
GDP  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
glyphosate  (ISO)
GTP  (ISO)
guanosine 5'-monophosphate  (ISO)
indometacin  (ISO)
iodomethane  (ISO)
isotretinoin  (ISO)
L-methionine  (EXP)
menadione  (ISO)
methoxychlor  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
N-nitrosodiethylamine  (EXP)
nickel dichloride  (ISO)
oxaliplatin  (ISO)
p-chloromercuribenzoic acid  (ISO)
paracetamol  (ISO)
PCB138  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
phenobarbital  (EXP)
Phenylglyoxal  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
piroxicam  (ISO)
potassium chromate  (ISO)
pyridoxal 5'-phosphate  (ISO)
quercetin  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
sodium arsenite  (EXP)
tamoxifen  (EXP)
temozolomide  (ISO)
thioacetamide  (ISO)
topotecan  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
trovafloxacin  (EXP)
uranium atom  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
zoledronic acid  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Composition of Drosophila melanogaster proteome involved in fucosylated glycan metabolism. Roos C, etal., J Biol Chem 2002 Feb 1;277(5):3168-75. Epub 2001 Nov 6.
Additional References at PubMed
PMID:10349636   PMID:10512203   PMID:10902914   PMID:11042159   PMID:11070054   PMID:11076861   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15489334   PMID:15782199   PMID:15840001  
PMID:16141072   PMID:16141073   PMID:16236725   PMID:16316986   PMID:16861703   PMID:17043354   PMID:17174880   PMID:17383961   PMID:17913729   PMID:18381897   PMID:19179362   PMID:21471224  
PMID:21873635   PMID:21951615   PMID:22084235   PMID:22433854   PMID:22732410   PMID:23267084   PMID:23375831   PMID:23609441   PMID:24619415   PMID:25652335   PMID:25873065   PMID:25979322  
PMID:25979332   PMID:26965517   PMID:27773703   PMID:28768188   PMID:29539633   PMID:30498063   PMID:30550785   PMID:30572004   PMID:31229844   PMID:31623829   PMID:32141499   PMID:32220931  
PMID:32423823   PMID:32460355   PMID:32710651   PMID:32888953   PMID:33608773   PMID:35189379   PMID:36252012   PMID:37432656  


Genomics

Comparative Map Data
Fut8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391277,284,878 - 77,522,770 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1277,284,899 - 77,523,112 (+)EnsemblGRCm39 Ensembl
GRCm381277,237,430 - 77,475,998 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1277,238,125 - 77,476,338 (+)EnsemblGRCm38mm10GRCm38
MGSCv371278,340,008 - 78,576,974 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361278,157,861 - 78,394,827 (+)NCBIMGSCv36mm8
Celera1278,319,280 - 78,556,375 (+)NCBICelera
Cytogenetic Map12C3NCBI
cM Map1235.46NCBI
FUT8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381465,356,842 - 65,744,121 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1465,410,592 - 65,744,121 (+)EnsemblGRCh38hg38GRCh38
GRCh371465,877,310 - 66,210,839 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361464,947,593 - 65,279,715 (+)NCBINCBI36Build 36hg18NCBI36
Build 341465,205,885 - 65,279,714NCBI
Celera1445,932,950 - 46,265,003 (+)NCBICelera
Cytogenetic Map14q23.3NCBI
HuRef1446,045,683 - 46,380,271 (+)NCBIHuRef
CHM1_11465,815,455 - 66,148,980 (+)NCBICHM1_1
T2T-CHM13v2.01459,615,360 - 59,948,716 (+)NCBIT2T-CHM13v2.0
Fut8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86101,682,354 - 101,909,784 (+)NCBIGRCr8
mRatBN7.2695,949,246 - 96,176,677 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl695,949,991 - 96,176,677 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx696,431,422 - 96,589,699 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0696,729,964 - 96,888,239 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0696,162,558 - 96,299,949 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06100,305,957 - 100,537,208 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6100,337,226 - 100,537,224 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06109,782,471 - 109,861,661 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.06109,896,811 - 109,922,225 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4699,871,195 - 100,010,833 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1699,874,650 - 100,014,289 (+)NCBI
Celera694,453,397 - 94,591,184 (+)NCBICelera
Cytogenetic Map6q24NCBI
Fut8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554664,246,336 - 4,399,751 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554664,248,414 - 4,481,942 (-)NCBIChiLan1.0ChiLan1.0
FUT8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21566,445,179 - 66,840,607 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11465,730,043 - 66,058,095 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01445,983,149 - 46,310,318 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11464,867,169 - 65,193,117 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1465,016,869 - 65,193,111 (+)Ensemblpanpan1.1panPan2
FUT8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1839,670,629 - 39,972,729 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl839,825,246 - 39,972,612 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha839,517,785 - 39,663,663 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0839,894,253 - 40,195,165 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl839,895,335 - 40,194,870 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1839,668,378 - 39,816,282 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0839,740,833 - 39,888,597 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0840,099,999 - 40,247,661 (+)NCBIUU_Cfam_GSD_1.0
Fut8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864064,850,261 - 65,179,285 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364959,115,938 - 9,344,068 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364959,012,425 - 9,341,538 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FUT8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl789,519,730 - 89,680,489 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1789,395,637 - 89,680,502 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2795,815,278 - 96,101,019 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FUT8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12442,627,340 - 42,965,505 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2442,788,132 - 42,968,124 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605330,814,869 - 31,156,411 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fut8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473435,264,019 - 35,458,277 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473435,257,666 - 35,617,275 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Fut8
6232 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:668
Count of miRNA genes:225
Interacting mature miRNAs:256
Transcripts:ENSMUST00000062804, ENSMUST00000171770, ENSMUST00000177595
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121534102679040364Mouse
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121759644780956883Mouse
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse
1357479Splwt1_mspleen weight 1 (mouse)Not determined124169317590887526Mouse
1357757Lnopy2_mlens opacity 2 (mouse)Not determined125284662686846796Mouse
1357749Vtbt13_mvertebral trabecular bone trait 13 (mouse)Not determined125313200287132145Mouse
12832727Ahrq1_mairway hyperresponsiveness QTL 1 (mouse)125469591082665939Mouse
27226728Tibl20_mtibia length 20, 16 week (mouse)125914678693866774Mouse
27226776Tibl6_mtibia length 6, 5 week (mouse)126064678692666774Mouse
10043948Pbft6_mpercent body fat 6 (mouse)Not determined126120542795205427Mouse
1301476Pbwg12_mpostnatal body weight growth 12 (mouse)Not determined126204016496040364Mouse
27226797Scvln19_msacral vertebrae length 2, 16 week (mouse)126214678699466259Mouse
10043895Bw20_mbody weight QTL 20 (mouse)Not determined126230825296308252Mouse
1301046Par3_mpulmonary adenoma resistance 3 (mouse)Not determined126395670897956883Mouse
1301337Cdcs8_mcytokine deficiency colitis susceptibility 8 (mouse)Not determined126468908398689229Mouse
1300633Cdcs7_mcytokine deficiency colitis susceptibility 7 (mouse)Not determined126468908398689229Mouse
14746976Manh73_mmandible shape 73 (mouse)126585713199857131Mouse
27226771Tibl14_mtibia length 14, 10 week (mouse)126834677498766259Mouse
27226793Feml10_mfemur length 10, 5 week (mouse)1268346774113363620Mouse
4141738Tgq23_mtriglyceride QTL 23 (mouse)Not determined72112877106112877Mouse
1301926Adip6_madiposity 6 (mouse)Not determined1273887422107887526Mouse
1301689Skull18_mskull morphology 18 (mouse)Not determined1273887422107887526Mouse
13524842Ppiq10a_mprepulse inhibition QTL 10a (mouse)1277512220111512220Mouse

Markers in Region
RH127620  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381277,475,581 - 77,475,795UniSTSGRCm38
MGSCv371278,576,568 - 78,576,782UniSTSGRCm37
Celera1278,555,969 - 78,556,183UniSTS
Cytogenetic Map12C3UniSTS
AB025198  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381277,475,450 - 77,475,537UniSTSGRCm38
MGSCv371278,576,437 - 78,576,524UniSTSGRCm37
Celera1278,555,838 - 78,555,925UniSTS
Cytogenetic Map12C3UniSTS
Whitehead/MRC_RH12718.66UniSTS
Fut8  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map12C3UniSTS
cM Map12 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001252614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001252616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_016893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_045554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB025198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC110302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC132342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC159296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU702757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ070536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ320809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF591874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF591875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GM744705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OQ693856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000062804   ⟹   ENSMUSP00000054530
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1277,285,839 - 77,523,112 (+)Ensembl
GRCm38.p6 Ensembl1277,239,065 - 77,476,338 (+)Ensembl
RefSeq Acc Id: ENSMUST00000171770   ⟹   ENSMUSP00000130845
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1277,284,922 - 77,522,656 (+)Ensembl
GRCm38.p6 Ensembl1277,238,148 - 77,475,882 (+)Ensembl
RefSeq Acc Id: ENSMUST00000177595   ⟹   ENSMUSP00000136327
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1277,284,899 - 77,522,759 (+)Ensembl
GRCm38.p6 Ensembl1277,238,125 - 77,475,985 (+)Ensembl
RefSeq Acc Id: ENSMUST00000217879
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1277,285,817 - 77,460,467 (+)Ensembl
GRCm38.p6 Ensembl1277,239,043 - 77,413,693 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218851
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1277,456,915 - 77,522,763 (+)Ensembl
GRCm38.p6 Ensembl1277,410,141 - 77,475,989 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219289
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1277,285,587 - 77,327,247 (+)Ensembl
GRCm38.p6 Ensembl1277,238,813 - 77,280,473 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219299
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1277,435,638 - 77,522,763 (+)Ensembl
GRCm38.p6 Ensembl1277,388,864 - 77,475,989 (+)Ensembl
RefSeq Acc Id: NM_001252614   ⟹   NP_001239543
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391277,284,878 - 77,522,770 (+)NCBI
GRCm381277,238,104 - 77,475,996 (+)NCBI
Celera1278,318,438 - 78,556,384 (+)ENTREZGENE
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252615   ⟹   NP_001239544
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391277,435,638 - 77,522,770 (+)NCBI
GRCm381277,388,864 - 77,475,996 (+)NCBI
Celera1278,318,438 - 78,556,384 (+)ENTREZGENE
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001252616   ⟹   NP_001239545
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391277,456,915 - 77,522,770 (+)NCBI
GRCm381277,410,141 - 77,475,996 (+)NCBI
Celera1278,318,438 - 78,556,384 (+)ENTREZGENE
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_016893   ⟹   NP_058589
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391277,284,878 - 77,522,770 (+)NCBI
GRCm381277,238,104 - 77,475,996 (+)NCBI
MGSCv371278,340,008 - 78,576,974 (+)RGD
Celera1278,318,438 - 78,556,384 (+)ENTREZGENE
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_045554
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391277,285,513 - 77,522,770 (+)NCBI
GRCm381277,238,739 - 77,475,996 (+)NCBI
Celera1278,318,438 - 78,556,384 (+)ENTREZGENE
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_058589   ⟸   NM_016893
- Peptide Label: isoform 1
- UniProtKB: Q543F5 (UniProtKB/Swiss-Prot),   Q921U1 (UniProtKB/Swiss-Prot),   Q9WTS2 (UniProtKB/Swiss-Prot),   Q3UYN7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239543   ⟸   NM_001252614
- Peptide Label: isoform 1
- UniProtKB: Q543F5 (UniProtKB/Swiss-Prot),   Q921U1 (UniProtKB/Swiss-Prot),   Q9WTS2 (UniProtKB/Swiss-Prot),   Q3UYN7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239544   ⟸   NM_001252615
- Peptide Label: isoform 2
- UniProtKB: B2X2D7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001239545   ⟸   NM_001252616
- Peptide Label: isoform 3
- UniProtKB: B2X2D8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000136327   ⟸   ENSMUST00000177595
RefSeq Acc Id: ENSMUSP00000130845   ⟸   ENSMUST00000171770
RefSeq Acc Id: ENSMUSP00000054530   ⟸   ENSMUST00000062804
Protein Domains
GT23   SH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9WTS2-F1-model_v2 AlphaFold Q9WTS2 1-575 view protein structure

Promoters
RGD ID:8678606
Promoter ID:EPDNEW_M17333
Type:initiation region
Name:Fut8_2
Description:Mus musculus fucosyltransferase 8 , transcript variant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17334  EPDNEW_M17335  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381277,238,101 - 77,238,161EPDNEW
RGD ID:8678608
Promoter ID:EPDNEW_M17334
Type:initiation region
Name:Fut8_1
Description:Mus musculus fucosyltransferase 8 , transcript variant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17333  EPDNEW_M17335  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381277,238,781 - 77,238,841EPDNEW
RGD ID:8678610
Promoter ID:EPDNEW_M17335
Type:initiation region
Name:Fut8_3
Description:Mus musculus fucosyltransferase 8 , transcript variant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17333  EPDNEW_M17334  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381277,239,065 - 77,239,125EPDNEW
RGD ID:6822962
Promoter ID:MM_KWN:12008
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour
Transcripts:UC007NYY.1,   UC007NYZ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361278,338,886 - 78,339,386 (+)MPROMDB
RGD ID:6822963
Promoter ID:MM_KWN:12009
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_0Hour,   Brain,   ES_Cell,   Lung,   MEF_B4,   Spleen
Transcripts:ENSMUST00000062804,   UC007NZA.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361278,339,631 - 78,340,131 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1858901 AgrOrtholog
Ensembl Genes ENSMUSG00000021065 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000062804.8 UniProtKB/Swiss-Prot
  ENSMUST00000171770 ENTREZGENE
  ENSMUST00000171770.10 UniProtKB/Swiss-Prot
  ENSMUST00000177595 ENTREZGENE
  ENSMUST00000177595.9 UniProtKB/Swiss-Prot
  ENSMUST00000218851 ENTREZGENE
  ENSMUST00000219299 ENTREZGENE
Gene3D-CATH 3.40.50.11350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ESAT-6-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 Domains UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Fut8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fut8_N_cat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fut8_SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GT23_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:53618 UniProtKB/Swiss-Prot
MGD MGI:1858901 ENTREZGENE
NCBI Gene 53618 ENTREZGENE
PANTHER ALPHA- 1,6 -FUCOSYLTRANSFERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ALPHA-(1,6)-FUCOSYLTRANSFERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam FUT8_N_cat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fut8 PhenoGen
PIRSF Alpha1_6FUT_euk UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE GT23 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50044 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B2X2D7 ENTREZGENE, UniProtKB/TrEMBL
  B2X2D8 ENTREZGENE, UniProtKB/TrEMBL
  FUT8_MOUSE UniProtKB/Swiss-Prot
  Q3UYN7 ENTREZGENE, UniProtKB/TrEMBL
  Q543F5 ENTREZGENE
  Q921U1 ENTREZGENE
  Q9WTS2 ENTREZGENE
UniProt Secondary Q543F5 UniProtKB/Swiss-Prot
  Q921U1 UniProtKB/Swiss-Prot