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Gene: Fut8 (fucosyltransferase 8) Mus musculus

Analyze

Symbol:

Fut8

Name:

fucosyltransferase 8

RGD ID:

1550689

MGI Page

MGI

Description:

Enables alpha-(1->6)-fucosyltransferase activity. Acts upstream of or within several processes, including N-glycan fucosylation; cell surface receptor signaling pathway; and fibroblast migration. Predicted to be located in Golgi cisterna membrane. Is expressed in telencephalon. Used to study pulmonary emphysema. Orthologous to human FUT8 (fucosyltransferase 8).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

alpha (1,6) fucosyltransferase; alpha-(1,6)-fucosyltransferase; alpha-1,6-fucosyltransferase; alpha1-6FucT; GDP-fucose--glycoprotein fucosyltransferase; GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha1,6-fucosyltransferase; glycoprotein 6-alpha-L-fucosyltransferase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FUT8 (fucosyltransferase 8)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Rattus norvegicus (Norway rat):	Fut8 (fucosyltransferase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Fut8 (fucosyltransferase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FUT8 (fucosyltransferase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FUT8 (fucosyltransferase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fut8 (fucosyltransferase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FUT8 (fucosyltransferase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FUT8 (fucosyltransferase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fut8 (fucosyltransferase 8)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Fut8 (fucosyltransferase 8)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	FUT8 (fucosyltransferase 8)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	fut8a (fucosyltransferase 8a (alpha (1,6) fucosyltransferase))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Danio rerio (zebrafish):	fut8b (fucosyltransferase 8b (alpha (1,6) fucosyltransferase))	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Caenorhabditis elegans (roundworm):	fut-8	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	FucT6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	fut8	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	77,284,878 - 77,522,770 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	77,284,899 - 77,523,112 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	77,237,430 - 77,475,998 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	77,238,125 - 77,476,338 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	78,340,008 - 78,576,974 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	78,157,861 - 78,394,827 (+)	NCBI		MGSCv36	mm8
Celera	12	78,319,280 - 78,556,375 (+)	NCBI		Celera
Cytogenetic Map	12	C3	NCBI
cM Map	12	35.46	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Congenital Disorder of Glycosylation with Defective Fucosylation 1 (ISO)

genetic disease (ISO)

Leber congenital amaurosis 13 (ISO)

pulmonary emphysema (IAGP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

(1->4)-beta-D-glucan (EXP)

1,2-dimethylhydrazine (EXP)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-diaminotoluene (EXP)

2,4-dinitrotoluene (ISO)

3-chloropropane-1,2-diol (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

3-methylcholanthrene (EXP)

4,4'-sulfonyldiphenol (EXP,ISO)

acetamide (ISO)

afimoxifene (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

Aroclor 1254 (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (EXP)

benzo[a]pyrene (EXP,ISO)

benzo[a]pyrene diol epoxide I (ISO)

bis(2-chloroethyl) sulfide (ISO)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (ISO)

bisphenol F (ISO)

caffeine (ISO)

calcitriol (ISO)

carmustine (ISO)

chlordecone (EXP)

choline (EXP)

cisplatin (ISO)

cobalt dichloride (ISO)

cocaine (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

diarsenic trioxide (EXP)

dibenzo[a,l]pyrene (ISO)

diethyl pyrocarbonate (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (ISO)

etoposide (ISO)

folic acid (EXP)

fucose (ISO)

fulvestrant (ISO)

GDP (ISO)

gentamycin (ISO)

glafenine (ISO)

glyphosate (ISO)

GTP (ISO)

guanosine 5'-monophosphate (ISO)

indometacin (ISO)

iodomethane (ISO)

isotretinoin (ISO)

L-methionine (EXP)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

menadione (ISO)

methoxychlor (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

N-nitrosodiethylamine (EXP)

nickel dichloride (ISO)

oxaliplatin (ISO)

p-chloromercuribenzoic acid (ISO)

paracetamol (ISO)

PCB138 (ISO)

perfluorooctane-1-sulfonic acid (EXP)

phenobarbital (EXP)

Phenylglyoxal (ISO)

phenylmercury acetate (ISO)

pirinixic acid (EXP)

piroxicam (ISO)

potassium chromate (ISO)

pyridoxal 5'-phosphate (ISO)

quercetin (ISO)

rotenone (ISO)

SB 431542 (ISO)

sodium arsenite (EXP,ISO)

tamoxifen (EXP)

temozolomide (ISO)

thioacetamide (ISO)

titanium dioxide (EXP)

topotecan (ISO)

trichloroethene (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

triptonide (EXP)

trovafloxacin (EXP)

uranium atom (ISO)

valproic acid (ISO)

vinclozolin (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell migration (IMP)

fibroblast migration (IMP)

GDP-L-fucose metabolic process (ISO,ISS)

integrin-mediated signaling pathway (IMP)

N-glycan fucosylation (IBA,IMP)

N-glycan processing (IMP)

protein N-linked glycosylation (IBA)

protein N-linked glycosylation via asparagine (ISO,ISS)

receptor metabolic process (IMP)

regulation of cellular response to oxidative stress (IMP)

regulation of gene expression (IMP)

respiratory gaseous exchange by respiratory system (IMP)

transforming growth factor beta receptor signaling pathway (IMP)

Cellular Component

Golgi cisterna membrane (IEA)

Molecular Function

alpha-(1->6)-fucosyltransferase activity (IBA,IMP)

glycoprotein 6-alpha-L-fucosyltransferase activity (ISO,ISS)

glycosyltransferase activity (ISA)

protein binding (ISO)

SH3 domain binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

keratan sulfate biosynthetic pathway (IEA)

N-linked glycan biosynthetic pathway (IEA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal ductus venosus valve morphology (IEA)

abnormal hepatic portal vein morphology (IEA)

abnormal hypoglossal nerve topology (IEA)

abnormal intestine placement (IEA)

abnormal pulmonary alveolus wall morphology (IAGP)

abnormal pulmonary elastic fiber morphology (IAGP)

abnormal pulmonary ventilation (IAGP)

abnormal respiration (IAGP)

abnormal rib morphology (IEA)

abnormal Wolffian duct morphology (IEA)

arteriovenous malformation (IEA)

blood in lymph vessels (IEA)

decreased survivor rate (IAGP)

dilated liver sinusoidal space (IEA)

dilated pulmonary alveolar duct (IAGP)

dilated respiratory conducting tube (IAGP)

embryo tumor (IEA)

emphysema (IAGP)

fusion of vertebral arches (IEA)

increased lung compliance (IAGP)

increased total lung capacity (IAGP)

overexpanded pulmonary alveolus (IAGP)

postnatal growth retardation (IAGP)

postnatal lethality, incomplete penetrance (IAGP)

spinal hemorrhage (IEA)

thin hypoglossal nerve (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	MGD IEA	MGD IEA
4.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
6.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
9.	Composition of Drosophila melanogaster proteome involved in fucosylated glycan metabolism.	Roos C, etal., J Biol Chem 2002 Feb 1;277(5):3168-75. Epub 2001 Nov 6.

Additional References at PubMed

PMID:10349636	PMID:10512203	PMID:10902914	PMID:11042159	PMID:11070054	PMID:11076861	PMID:12477932	PMID:12520002	PMID:14610273	PMID:15489334	PMID:15782199	PMID:15840001
PMID:16141072	PMID:16141073	PMID:16236725	PMID:16316986	PMID:16861703	PMID:17043354	PMID:17174880	PMID:17383961	PMID:17913729	PMID:18381897	PMID:19179362	PMID:21471224
PMID:21873635	PMID:21951615	PMID:22084235	PMID:22433854	PMID:22732410	PMID:23267084	PMID:23375831	PMID:23609441	PMID:24619415	PMID:25652335	PMID:25873065	PMID:25979322
PMID:25979332	PMID:26965517	PMID:27773703	PMID:28768188	PMID:29539633	PMID:30418981	PMID:30498063	PMID:30550785	PMID:30572004	PMID:31229844	PMID:31623829	PMID:32141499
PMID:32220931	PMID:32423823	PMID:32460355	PMID:32710651	PMID:32888953	PMID:33608773	PMID:35189379	PMID:36252012	PMID:37432656	PMID:38355793	PMID:38466626	PMID:38523237

Genomics

Comparative Map Data

Fut8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	77,284,878 - 77,522,770 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	77,284,899 - 77,523,112 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	77,237,430 - 77,475,998 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	77,238,125 - 77,476,338 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	78,340,008 - 78,576,974 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	78,157,861 - 78,394,827 (+)	NCBI		MGSCv36	mm8
Celera	12	78,319,280 - 78,556,375 (+)	NCBI		Celera
Cytogenetic Map	12	C3	NCBI
cM Map	12	35.46	NCBI

FUT8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	65,356,842 - 65,744,121 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	65,410,592 - 65,744,121 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	65,877,310 - 66,210,839 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	64,947,593 - 65,279,715 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	65,205,885 - 65,279,714	NCBI
Celera	14	45,932,950 - 46,265,003 (+)	NCBI		Celera
Cytogenetic Map	14	q23.3	NCBI
HuRef	14	46,045,683 - 46,380,271 (+)	NCBI		HuRef
CHM1_1	14	65,815,455 - 66,148,980 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	59,615,360 - 59,948,716 (+)	NCBI		T2T-CHM13v2.0

Fut8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	101,682,354 - 101,909,784 (+)	NCBI		GRCr8
mRatBN7.2	6	95,949,246 - 96,176,677 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	95,949,991 - 96,176,677 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	96,431,422 - 96,589,699 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	96,729,964 - 96,888,239 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	96,162,558 - 96,299,949 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	100,305,957 - 100,537,208 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	100,337,226 - 100,537,224 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	109,782,471 - 109,861,661 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	6	109,896,811 - 109,922,225 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	99,871,195 - 100,010,833 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	99,874,650 - 100,014,289 (+)	NCBI
Celera	6	94,453,397 - 94,591,184 (+)	NCBI		Celera
Cytogenetic Map	6	q24	NCBI

Fut8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955466	4,246,336 - 4,399,751 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955466	4,248,414 - 4,481,942 (-)	NCBI	ChiLan1.0	ChiLan1.0

FUT8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	66,445,179 - 66,840,607 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	65,730,043 - 66,058,095 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	45,983,149 - 46,310,318 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	64,867,169 - 65,193,117 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	65,016,869 - 65,193,111 (+)	Ensembl	panpan1.1		panPan2

FUT8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	39,670,629 - 39,972,729 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	39,825,246 - 39,972,612 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	39,517,785 - 39,663,663 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	39,894,253 - 40,195,165 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	39,895,335 - 40,194,870 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	39,668,378 - 39,816,282 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	39,740,833 - 39,888,597 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	40,099,999 - 40,247,661 (+)	NCBI		UU_Cfam_GSD_1.0

Fut8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	64,850,261 - 65,179,285 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936495	9,115,938 - 9,344,068 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936495	9,012,425 - 9,341,538 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FUT8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	89,519,730 - 89,680,489 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	89,395,637 - 89,680,502 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	95,815,278 - 96,101,019 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FUT8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	42,627,340 - 42,965,505 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	42,788,132 - 42,968,124 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	30,814,869 - 31,156,411 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fut8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	35,264,019 - 35,458,277 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624734	35,257,666 - 35,617,275 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Fut8
6232 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	668
Count of miRNA genes:	225
Interacting mature miRNAs:	256
Transcripts:	ENSMUST00000062804, ENSMUST00000171770, ENSMUST00000177595
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
14746976	Manh73_m	mandible shape 73 (mouse)					12	65857131	99857131	Mouse
27226776	Tibl6_m	tibia length 6, 5 week (mouse)					12	60646786	92666774	Mouse
1301337	Cdcs8_m	cytokine deficiency colitis susceptibility 8 (mouse)			Not determined		12	64689083	98689229	Mouse
1300633	Cdcs7_m	cytokine deficiency colitis susceptibility 7 (mouse)			Not determined		12	64689083	98689229	Mouse
27226771	Tibl14_m	tibia length 14, 10 week (mouse)					12	68346774	98766259	Mouse
4142002	Tbqt3_m	tibia bone quality traits 3 (mouse)			Not determined		12	35285496	109936243	Mouse
12832727	Ahrq1_m	airway hyperresponsiveness QTL 1 (mouse)					12	54695910	82665939	Mouse
1558978	Cplaq10_m	circadian period of locomotor activity 10 (mouse)			Not determined		12	15341026	79040364	Mouse
1301574	Lmblgq5_m	limb length QTL 5 (mouse)			Not determined		12	17596447	80956883	Mouse
4141738	Tgq23_m	triglyceride QTL 23 (mouse)			Not determined			72112877	106112877	Mouse
13207568	Tcq14_m	total cholesterol QTL 14 (mouse)					12	11660001	97176774	Mouse
27226753	Femd7_m	femur midshaft diameter 7, 10 week (mouse)					12	9550000	84146774	Mouse
1357749	Vtbt13_m	vertebral trabecular bone trait 13 (mouse)			Not determined		12	53132002	87132145	Mouse
13524842	Ppiq10a_m	prepulse inhibition QTL 10a (mouse)					12	77512220	111512220	Mouse
1301046	Par3_m	pulmonary adenoma resistance 3 (mouse)			Not determined		12	63956708	97956883	Mouse
1357757	Lnopy2_m	lens opacity 2 (mouse)			Not determined		12	52846626	86846796	Mouse
1301689	Skull18_m	skull morphology 18 (mouse)			Not determined		12	73887422	107887526	Mouse
10043895	Bw20_m	body weight QTL 20 (mouse)			Not determined		12	62308252	96308252	Mouse
27226797	Scvln19_m	sacral vertebrae length 2, 16 week (mouse)					12	62146786	99466259	Mouse
1357479	Splwt1_m	spleen weight 1 (mouse)			Not determined		12	41693175	90887526	Mouse
10043948	Pbft6_m	percent body fat 6 (mouse)			Not determined		12	61205427	95205427	Mouse
1301926	Adip6_m	adiposity 6 (mouse)			Not determined		12	73887422	107887526	Mouse
27226793	Feml10_m	femur length 10, 5 week (mouse)					12	68346774	113363620	Mouse
27226728	Tibl20_m	tibia length 20, 16 week (mouse)					12	59146786	93866774	Mouse
1301476	Pbwg12_m	postnatal body weight growth 12 (mouse)			Not determined		12	62040164	96040364	Mouse

Markers in Region

RH127620

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	12	77,475,581 - 77,475,795	UniSTS	GRCm38
MGSCv37	12	78,576,568 - 78,576,782	UniSTS	GRCm37
Celera	12	78,555,969 - 78,556,183	UniSTS
Cytogenetic Map	12	C3	UniSTS

AB025198

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	12	77,475,450 - 77,475,537	UniSTS	GRCm38
MGSCv37	12	78,576,437 - 78,576,524	UniSTS	GRCm37
Celera	12	78,555,838 - 78,555,925	UniSTS
Cytogenetic Map	12	C3	UniSTS
Whitehead/MRC_RH	12	718.66	UniSTS

Fut8

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	12	C3	UniSTS
cM Map	12		UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001252614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001252615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001252616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_016893	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_045554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB025198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC110302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC132342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC159296	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK048520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK051811	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK078788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK133547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK134537	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK157989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK163494	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK183245	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK184785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK185049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK188352	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK205678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK207395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK210295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK211417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK216622	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC010666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BU702757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CJ070536	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CJ320809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EF591874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EF591875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GM744705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	OQ693856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000062804 ⟹ ENSMUSP00000054530

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,285,839 - 77,523,112 (+)	Ensembl
GRCm38.p6 Ensembl	12	77,239,065 - 77,476,338 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000171770 ⟹ ENSMUSP00000130845

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,284,922 - 77,522,656 (+)	Ensembl
GRCm38.p6 Ensembl	12	77,238,148 - 77,475,882 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000177595 ⟹ ENSMUSP00000136327

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,284,899 - 77,522,759 (+)	Ensembl
GRCm38.p6 Ensembl	12	77,238,125 - 77,475,985 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000217879

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,285,817 - 77,460,467 (+)	Ensembl
GRCm38.p6 Ensembl	12	77,239,043 - 77,413,693 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000218851

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,456,915 - 77,522,763 (+)	Ensembl
GRCm38.p6 Ensembl	12	77,410,141 - 77,475,989 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000219289

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,285,587 - 77,327,247 (+)	Ensembl
GRCm38.p6 Ensembl	12	77,238,813 - 77,280,473 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000219299

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,435,638 - 77,522,763 (+)	Ensembl
GRCm38.p6 Ensembl	12	77,388,864 - 77,475,989 (+)	Ensembl

RefSeq Acc Id:

NM_001252614 ⟹ NP_001239543

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	77,284,878 - 77,522,770 (+)	NCBI
GRCm38	12	77,238,104 - 77,475,996 (+)	NCBI
Celera	12	78,318,438 - 78,556,384 (+)	ENTREZGENE
cM Map	12		ENTREZGENE

Sequence:

show sequence

CTCCCGCCCAGCTCGCCCTCCCGGACGGTCTGTCGGAGGTAGCCCTTCGGCACTCGGCTCAGCA
TCGCGGGCGTCAGGATCCCCGAGTGCGAGCGGGTTGCTGTTCTGGCTGAGGCCATCTATGGCCC
TGGTAGTGTTTTCATTCAAGACAAAGTCCATTCCATCTTTATTTATTAGCTGAGCAAATTCAGA
TATAAAAAGATCTTGAGAAAATGTAATGCTCTGTGTCAGAGAATGCTCATGTTGCTTGGTAGAG
ATTCCTGCTGTTACTCTGGGCACGCTAATAATTTTCAAGACCCAGATTCAAGCAATAAAACATT
TCTCTGCAATACCATGTGGTTTTCTTCAACATCATAATTCTATGGGGAGGAAGCATGTAGGATC
CATGAAGCACAGGACATTCAAGCCTCCCGCCCGCGTCACCAGGAAGATCTCTTTGTAAGAATAA
CCACAGGATTGATTTCCAGAGAGATTAGCCTGTCTGAAGCATTATGTGTTGAAGCAAAAGAAAC
CTATTTTCTTGTGTGGCTAACTAGAACCAGAGTACAATGTTTCCAGTTCTTTGAGCTCCAGGAA
GATAGAGGACAGAGTTGAAACTCTGAAAATGCGGGCATGGACTGGTTCCTGGCGTTGGATTATG
CTCATTCTTTTTGCCTGGGGGACCTTGTTATTTTATATAGGTGGTCATTTGGTTCGAGATAATG
ACCACCCTGATCACTCCAGCAGAGAACTCTCCAAGATTCTTGCAAAGCTTGAACGCTTAAAACA
GCAAAATGAAGACTTGAGGCGAATGGCTGAGTCTCTCCGAATACCAGAAGGCCCCATTGACCAG
GGGACAGCTACAGGAAGAGTCCGTGTTTTAGAAGAACAGCTTGTTAAGGCCAAAGAACAGATTG
AAAATTACAAGAAACAAGCTAGAAATGGTCTGGGGAAGGATCATGAAATCTTAAGAAGGAGGAT
TGAAAATGGAGCTAAAGAGCTCTGGTTTTTTCTACAAAGCGAACTGAAGAAATTAAAGCATTTA
GAAGGAAATGAACTCCAAAGACATGCAGATGAAATTCTTTTGGATTTAGGACACCATGAAAGGT
CTATCATGACAGATCTATACTACCTCAGTCAAACAGATGGAGCAGGGGATTGGCGTGAAAAAGA
GGCCAAAGATCTGACAGAGCTGGTCCAGCGGAGAATAACATATCTCCAGAATCCTAAGGACTGC
AGCAAAGCCAGGAAGCTGGTGTGTAACATCAATAAAGGCTGTGGCTATGGTTGTCAACTCCATC
ACGTGGTCTACTGTTTCATGATTGCTTATGGCACCCAGCGAACACTCATCTTGGAATCTCAGAA
TTGGCGCTATGCTACTGGTGGATGGGAGACTGTGTTTAGACCTGTAAGTGAGACATGTACAGAC
AGATCTGGCCTCTCCACTGGACACTGGTCAGGTGAAGTAAATGACAAAAACATTCAAGTGGTCG
AGCTCCCCATTGTAGACAGCCTCCATCCTCGGCCTCCTTACTTACCACTGGCTGTTCCAGAAGA
CCTTGCAGACCGACTCCTAAGAGTCCATGGTGACCCTGCAGTGTGGTGGGTGTCCCAGTTTGTC
AAATACTTGATTCGTCCACAACCTTGGCTGGAAAAGGAAATAGAAGAAGCCACCAAGAAGCTTG
GCTTCAAACATCCAGTTATTGGAGTCCATGTCAGACGCACAGACAAAGTGGGAACAGAAGCAGC
CTTCCACCCCATCGAGGAGTACATGGTACACGTTGAAGAACATTTTCAGCTTCTCGCACGCAGA
ATGCAAGTGGATAAAAAAAGAGTATATCTGGCTACTGATGATCCTACTTTGTTAAAGGAGGCAA
AGACAAAGTACTCCAATTATGAATTTATTAGTGATAACTCTATTTCTTGGTCAGCTGGACTACA
CAATCGGTACACAGAAAATTCACTTCGGGGTGTGATCCTGGATATACACTTTCTCTCACAGGCT
GACTTTCTAGTGTGTACTTTTTCATCCCAGGTCTGTCGGGTTGCTTATGAAATCATGCAAACCC
TGCATCCTGATGCCTCTGCGAACTTCCATTCTTTGGATGACATCTACTATTTTGGAGGCCAAAA
TGCCCACAATCAGATTGCTGTTTATCCTCACAAACCTCGAACTGAAGAGGAAATTCCAATGGAA
CCTGGAGATATCATTGGTGTGGCTGGAAACCATTGGGATGGTTATTCTAAAGGTATCAACAGAA
AACTTGGAAAAACAGGCTTATATCCCTCCTACAAAGTCCGAGAGAAGATAGAAACAGTCAAGTA
TCCCACATATCCTGAAGCTGAAAAATAGAGATGAAGTAGAAGAGATTAACAACAGAACTCACTT
CAGACCATCTCGGCCAAGCAGAAGACGCAGACTAACACGTGGTTCATTGATAGACACGCTCCAC
ACCAAGAGCAAGCGGGAACCCTCAGATGCTGCACTGGTGGAACGCCTCTTTATGAAGGGCTGTG
GTGCCCTCAAGCCCATACACAGTACAATAATGTACTCACACATAACACGCAAAGGGATTATTTT
CTACTTTGCCCCTTTAAATATTATGTCCCCATTGAACAAACACTGCCACATTGTGTAATTTAAG
TGACACAGACATTTTGTGTGAGACTTAAAACATGGTGCCTATATCTGAGAGACCTCTGTGACTT
ACCGAGAAGATGTGAACAGCTCCCTTCTCTGGGGAAGCTGGTGGTGGTGTGGCCACTGAATTCA
CTCCAGTCAACAGATTCAAAATGAGAATGGATGTTTTTCCTTTATATGGTTGTCTGGATTTTTT
TTTAAGTAATTTCATCAGTTCAGTTTATCCACCTCATCATTAATAAATGAAGGATGCATCAATA
AAATAAAATGAAATATTCACTCTCCATTAGGAAGTTTTGTAAAACAATGCCATGAACAAATTCT
TTAGTACTCAATGTTTCTGGACATTCTCTTTGATAACAAAAAAATAAATTTCAAAAAGGAATTT
TGTG

hide sequence

RefSeq Acc Id:

NM_001252615 ⟹ NP_001239544

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	77,435,638 - 77,522,770 (+)	NCBI
GRCm38	12	77,388,864 - 77,475,996 (+)	NCBI
Celera	12	78,318,438 - 78,556,384 (+)	ENTREZGENE
cM Map	12		ENTREZGENE

Sequence:

show sequence

TTAGCAGTGTTCTCCTGTATTTCTTTAAGTGATTTATTAAAGTCCTTCTTGATGTCCTCTACCA
TCATCATGAGATATGCTTTTAAATCTAGGTCTAGGTTTTCGAGTGTGTTGGGGTGCCCTGGACT
GGACGAAGTGGGAGTGCTGGGTTCTGATGATGGTCTATCATGACAGATCTATACTACCTCAGTC
AAACAGATGGAGCAGGGGATTGGCGTGAAAAAGAGGCCAAAGATCTGACAGAGCTGGTCCAGCG
GAGAATAACATATCTCCAGAATCCTAAGGACTGCAGCAAAGCCAGGAAGCTGGTGTGTAACATC
AATAAAGGCTGTGGCTATGGTTGTCAACTCCATCACGTGGTCTACTGTTTCATGATTGCTTATG
GCACCCAGCGAACACTCATCTTGGAATCTCAGAATTGGCGCTATGCTACTGGTGGATGGGAGAC
TGTGTTTAGACCTGTAAGTGAGACATGTACAGACAGATCTGGCCTCTCCACTGGACACTGGTCA
GGTGAAGTAAATGACAAAAACATTCAAGTGGTCGAGCTCCCCATTGTAGACAGCCTCCATCCTC
GGCCTCCTTACTTACCACTGGCTGTTCCAGAAGACCTTGCAGACCGACTCCTAAGAGTCCATGG
TGACCCTGCAGTGTGGTGGGTGTCCCAGTTTGTCAAATACTTGATTCGTCCACAACCTTGGCTG
GAAAAGGAAATAGAAGAAGCCACCAAGAAGCTTGGCTTCAAACATCCAGTTATTGGAGTCCATG
TCAGACGCACAGACAAAGTGGGAACAGAAGCAGCCTTCCACCCCATCGAGGAGTACATGGTACA
CGTTGAAGAACATTTTCAGCTTCTCGCACGCAGAATGCAAGTGGATAAAAAAAGAGTATATCTG
GCTACTGATGATCCTACTTTGTTAAAGGAGGCAAAGACAAAGTACTCCAATTATGAATTTATTA
GTGATAACTCTATTTCTTGGTCAGCTGGACTACACAATCGGTACACAGAAAATTCACTTCGGGG
TGTGATCCTGGATATACACTTTCTCTCACAGGCTGACTTTCTAGTGTGTACTTTTTCATCCCAG
GTCTGTCGGGTTGCTTATGAAATCATGCAAACCCTGCATCCTGATGCCTCTGCGAACTTCCATT
CTTTGGATGACATCTACTATTTTGGAGGCCAAAATGCCCACAATCAGATTGCTGTTTATCCTCA
CAAACCTCGAACTGAAGAGGAAATTCCAATGGAACCTGGAGATATCATTGGTGTGGCTGGAAAC
CATTGGGATGGTTATTCTAAAGGTATCAACAGAAAACTTGGAAAAACAGGCTTATATCCCTCCT
ACAAAGTCCGAGAGAAGATAGAAACAGTCAAGTATCCCACATATCCTGAAGCTGAAAAATAGAG
ATGAAGTAGAAGAGATTAACAACAGAACTCACTTCAGACCATCTCGGCCAAGCAGAAGACGCAG
ACTAACACGTGGTTCATTGATAGACACGCTCCACACCAAGAGCAAGCGGGAACCCTCAGATGCT
GCACTGGTGGAACGCCTCTTTATGAAGGGCTGTGGTGCCCTCAAGCCCATACACAGTACAATAA
TGTACTCACACATAACACGCAAAGGGATTATTTTCTACTTTGCCCCTTTAAATATTATGTCCCC
ATTGAACAAACACTGCCACATTGTGTAATTTAAGTGACACAGACATTTTGTGTGAGACTTAAAA
CATGGTGCCTATATCTGAGAGACCTCTGTGACTTACCGAGAAGATGTGAACAGCTCCCTTCTCT
GGGGAAGCTGGTGGTGGTGTGGCCACTGAATTCACTCCAGTCAACAGATTCAAAATGAGAATGG
ATGTTTTTCCTTTATATGGTTGTCTGGATTTTTTTTTAAGTAATTTCATCAGTTCAGTTTATCC
ACCTCATCATTAATAAATGAAGGATGCATCAATAAAATAAAATGAAATATTCACTCTCCATTAG
GAAGTTTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAATGTTTCTGGACATTCTCTT
TGATAACAAAAAAATAAATTTCAAAAAGGAATTTTGTG

hide sequence

RefSeq Acc Id:

NM_001252616 ⟹ NP_001239545

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	77,456,915 - 77,522,770 (+)	NCBI
GRCm38	12	77,410,141 - 77,475,996 (+)	NCBI
Celera	12	78,318,438 - 78,556,384 (+)	ENTREZGENE
cM Map	12		ENTREZGENE

Sequence:

show sequence

TTTCCTAGGGTTTCTATCTCTAGTGTTGCCTCGCTTTGAGTTTTCTTTATTGTGTCTACTTCCC
TTTTTAGGTCCAGTATGGTTTTGTTCATTTCCATCACCTGTTTGTATGTTTTTTCCTCTTTTTC
TGTAAGGACTTCTACCTGTTTGATTGTGTTTTCCTGTTTTTCTTTAAGGACTTGTAACTCTTTA
GCAGTGTTCTCCTGTATTTCTTTAAGTGATTTATTAAAGTCCTTCTTGATGTCCTCTACCATCA
TCATGAGATATGCTTTTAAATCTAGGTCTAGGTTCTCAGAATCCTAAGGACTGCAGCAAAGCCA
GGAAGCTGGTGTGTAACATCAATAAAGGCTGTGGCTATGGTTGTCAACTCCATCACGTGGTCTA
CTGTTTCATGATTGCTTATGGCACCCAGCGAACACTCATCTTGGAATCTCAGAATTGGCGCTAT
GCTACTGGTGGATGGGAGACTGTGTTTAGACCTGTAAGTGAGACATGTACAGACAGATCTGGCC
TCTCCACTGGACACTGGTCAGGTGAAGTAAATGACAAAAACATTCAAGTGGTCGAGCTCCCCAT
TGTAGACAGCCTCCATCCTCGGCCTCCTTACTTACCACTGGCTGTTCCAGAAGACCTTGCAGAC
CGACTCCTAAGAGTCCATGGTGACCCTGCAGTGTGGTGGGTGTCCCAGTTTGTCAAATACTTGA
TTCGTCCACAACCTTGGCTGGAAAAGGAAATAGAAGAAGCCACCAAGAAGCTTGGCTTCAAACA
TCCAGTTATTGGAGTCCATGTCAGACGCACAGACAAAGTGGGAACAGAAGCAGCCTTCCACCCC
ATCGAGGAGTACATGGTACACGTTGAAGAACATTTTCAGCTTCTCGCACGCAGAATGCAAGTGG
ATAAAAAAAGAGTATATCTGGCTACTGATGATCCTACTTTGTTAAAGGAGGCAAAGACAAAGTA
CTCCAATTATGAATTTATTAGTGATAACTCTATTTCTTGGTCAGCTGGACTACACAATCGGTAC
ACAGAAAATTCACTTCGGGGTGTGATCCTGGATATACACTTTCTCTCACAGGCTGACTTTCTAG
TGTGTACTTTTTCATCCCAGGTCTGTCGGGTTGCTTATGAAATCATGCAAACCCTGCATCCTGA
TGCCTCTGCGAACTTCCATTCTTTGGATGACATCTACTATTTTGGAGGCCAAAATGCCCACAAT
CAGATTGCTGTTTATCCTCACAAACCTCGAACTGAAGAGGAAATTCCAATGGAACCTGGAGATA
TCATTGGTGTGGCTGGAAACCATTGGGATGGTTATTCTAAAGGTATCAACAGAAAACTTGGAAA
AACAGGCTTATATCCCTCCTACAAAGTCCGAGAGAAGATAGAAACAGTCAAGTATCCCACATAT
CCTGAAGCTGAAAAATAGAGATGAAGTAGAAGAGATTAACAACAGAACTCACTTCAGACCATCT
CGGCCAAGCAGAAGACGCAGACTAACACGTGGTTCATTGATAGACACGCTCCACACCAAGAGCA
AGCGGGAACCCTCAGATGCTGCACTGGTGGAACGCCTCTTTATGAAGGGCTGTGGTGCCCTCAA
GCCCATACACAGTACAATAATGTACTCACACATAACACGCAAAGGGATTATTTTCTACTTTGCC
CCTTTAAATATTATGTCCCCATTGAACAAACACTGCCACATTGTGTAATTTAAGTGACACAGAC
ATTTTGTGTGAGACTTAAAACATGGTGCCTATATCTGAGAGACCTCTGTGACTTACCGAGAAGA
TGTGAACAGCTCCCTTCTCTGGGGAAGCTGGTGGTGGTGTGGCCACTGAATTCACTCCAGTCAA
CAGATTCAAAATGAGAATGGATGTTTTTCCTTTATATGGTTGTCTGGATTTTTTTTTAAGTAAT
TTCATCAGTTCAGTTTATCCACCTCATCATTAATAAATGAAGGATGCATCAATAAAATAAAATG
AAATATTCACTCTCCATTAGGAAGTTTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCA
ATGTTTCTGGACATTCTCTTTGATAACAAAAAAATAAATTTCAAAAAGGAATTTTGTG

hide sequence

RefSeq Acc Id:

NM_016893 ⟹ NP_058589

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	77,284,878 - 77,522,770 (+)	NCBI
GRCm38	12	77,238,104 - 77,475,996 (+)	NCBI
MGSCv37	12	78,340,008 - 78,576,974 (+)	RGD
Celera	12	78,318,438 - 78,556,384 (+)	ENTREZGENE
cM Map	12		ENTREZGENE

Sequence:

show sequence

CTCCCGCCCAGCTCGCCCTCCCGGACGGTCTGTCGGAGGTAGCCCTTCGGCACTCGGCTCAGCA
TCGCGGGCGTCAGGATCCCCGAGTGCGAGCGGGTTGCTGTTCTGGCTGAGGCCATCTATGGCCC
TGGTAGTGTTTTCATTCAAGACAAAGTCCATTCCATCTTTATTTATTAGCTGAGCAAATTCAGC
TAATAATTTTCAAGACCCAGATTCAAGCAATAAAACATTTCTCTGCAATACCATGTGGTTTTCT
TCAACATCATAATTCTATGGGGAGGAAGCATGTAGGATCCATGAAGCACAGGACATTCAAGCCT
CCCGCCCGCGTCACCAGGAAGATCTCTTTGTAAGAATAACCACAGGATTGATTTCCAGAGAGAT
TAGCCTGTCTGAAGCATTATGTGTTGAAGCAAAAGAAACCTATTTTCTTGTGTGGCTAACTAGA
ACCAGAGTACAATGTTTCCAGTTCTTTGAGCTCCAGGAAGATAGAGGACAGAGTTGAAACTCTG
AAAATGCGGGCATGGACTGGTTCCTGGCGTTGGATTATGCTCATTCTTTTTGCCTGGGGGACCT
TGTTATTTTATATAGGTGGTCATTTGGTTCGAGATAATGACCACCCTGATCACTCCAGCAGAGA
ACTCTCCAAGATTCTTGCAAAGCTTGAACGCTTAAAACAGCAAAATGAAGACTTGAGGCGAATG
GCTGAGTCTCTCCGAATACCAGAAGGCCCCATTGACCAGGGGACAGCTACAGGAAGAGTCCGTG
TTTTAGAAGAACAGCTTGTTAAGGCCAAAGAACAGATTGAAAATTACAAGAAACAAGCTAGAAA
TGGTCTGGGGAAGGATCATGAAATCTTAAGAAGGAGGATTGAAAATGGAGCTAAAGAGCTCTGG
TTTTTTCTACAAAGCGAACTGAAGAAATTAAAGCATTTAGAAGGAAATGAACTCCAAAGACATG
CAGATGAAATTCTTTTGGATTTAGGACACCATGAAAGGTCTATCATGACAGATCTATACTACCT
CAGTCAAACAGATGGAGCAGGGGATTGGCGTGAAAAAGAGGCCAAAGATCTGACAGAGCTGGTC
CAGCGGAGAATAACATATCTCCAGAATCCTAAGGACTGCAGCAAAGCCAGGAAGCTGGTGTGTA
ACATCAATAAAGGCTGTGGCTATGGTTGTCAACTCCATCACGTGGTCTACTGTTTCATGATTGC
TTATGGCACCCAGCGAACACTCATCTTGGAATCTCAGAATTGGCGCTATGCTACTGGTGGATGG
GAGACTGTGTTTAGACCTGTAAGTGAGACATGTACAGACAGATCTGGCCTCTCCACTGGACACT
GGTCAGGTGAAGTAAATGACAAAAACATTCAAGTGGTCGAGCTCCCCATTGTAGACAGCCTCCA
TCCTCGGCCTCCTTACTTACCACTGGCTGTTCCAGAAGACCTTGCAGACCGACTCCTAAGAGTC
CATGGTGACCCTGCAGTGTGGTGGGTGTCCCAGTTTGTCAAATACTTGATTCGTCCACAACCTT
GGCTGGAAAAGGAAATAGAAGAAGCCACCAAGAAGCTTGGCTTCAAACATCCAGTTATTGGAGT
CCATGTCAGACGCACAGACAAAGTGGGAACAGAAGCAGCCTTCCACCCCATCGAGGAGTACATG
GTACACGTTGAAGAACATTTTCAGCTTCTCGCACGCAGAATGCAAGTGGATAAAAAAAGAGTAT
ATCTGGCTACTGATGATCCTACTTTGTTAAAGGAGGCAAAGACAAAGTACTCCAATTATGAATT
TATTAGTGATAACTCTATTTCTTGGTCAGCTGGACTACACAATCGGTACACAGAAAATTCACTT
CGGGGTGTGATCCTGGATATACACTTTCTCTCACAGGCTGACTTTCTAGTGTGTACTTTTTCAT
CCCAGGTCTGTCGGGTTGCTTATGAAATCATGCAAACCCTGCATCCTGATGCCTCTGCGAACTT
CCATTCTTTGGATGACATCTACTATTTTGGAGGCCAAAATGCCCACAATCAGATTGCTGTTTAT
CCTCACAAACCTCGAACTGAAGAGGAAATTCCAATGGAACCTGGAGATATCATTGGTGTGGCTG
GAAACCATTGGGATGGTTATTCTAAAGGTATCAACAGAAAACTTGGAAAAACAGGCTTATATCC
CTCCTACAAAGTCCGAGAGAAGATAGAAACAGTCAAGTATCCCACATATCCTGAAGCTGAAAAA
TAGAGATGAAGTAGAAGAGATTAACAACAGAACTCACTTCAGACCATCTCGGCCAAGCAGAAGA
CGCAGACTAACACGTGGTTCATTGATAGACACGCTCCACACCAAGAGCAAGCGGGAACCCTCAG
ATGCTGCACTGGTGGAACGCCTCTTTATGAAGGGCTGTGGTGCCCTCAAGCCCATACACAGTAC
AATAATGTACTCACACATAACACGCAAAGGGATTATTTTCTACTTTGCCCCTTTAAATATTATG
TCCCCATTGAACAAACACTGCCACATTGTGTAATTTAAGTGACACAGACATTTTGTGTGAGACT
TAAAACATGGTGCCTATATCTGAGAGACCTCTGTGACTTACCGAGAAGATGTGAACAGCTCCCT
TCTCTGGGGAAGCTGGTGGTGGTGTGGCCACTGAATTCACTCCAGTCAACAGATTCAAAATGAG
AATGGATGTTTTTCCTTTATATGGTTGTCTGGATTTTTTTTTAAGTAATTTCATCAGTTCAGTT
TATCCACCTCATCATTAATAAATGAAGGATGCATCAATAAAATAAAATGAAATATTCACTCTCC
ATTAGGAAGTTTTGTAAAACAATGCCATGAACAAATTCTTTAGTACTCAATGTTTCTGGACATT
CTCTTTGATAACAAAAAAATAAATTTCAAAAAGGAATTTTGTG

hide sequence

RefSeq Acc Id:

NR_045554

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	77,285,513 - 77,522,770 (+)	NCBI
GRCm38	12	77,238,739 - 77,475,996 (+)	NCBI
Celera	12	78,318,438 - 78,556,384 (+)	ENTREZGENE
cM Map	12		ENTREZGENE

Sequence:

show sequence

GGACGCCGAGGGGCGCGCGCCCCTCTCCGCGCGCGCACGCTCGCTCGCTCGCTCCCTCGCTCGC
GCCGGCCGGCGGCTTCCCCGCCTGCGCTCCCGGTCGGAGCCACTCCGGCGCGTGCGCGCGTGGT
CTCGGGCCGACCCGAGTGGCCGGGTTCTCTGGGCTCCAGGCCCCCGCCGCCCCCTCCCCGGCTC
CCAGCCAACCCGTCCCTCCCTTTCCTCACGGAATGGGGCCGGCGCTGCTCGGGGTCGCGCGTCC
TGGACCCGGCTCGCGCTCGGTCTCGCGCTGTCAGCCGCTGCCTGGCTCGCGCCGCCTTGCGCTT
TCCCTCAGTCAGTGGCGCCGAAGGCTCCGTTAAGCGGCGGCCGCGGTTCCTGTTTCCGTTTCTT
CCTCTCCCTTCAGTCGGGAGTAGCATCCTCCACCCCAGCACCCCTCCCACTCTCCCGCCGCGGC
CAGCTGCAGCTGGAGGCAGCGGCGGCGGCGACGGGGGACGGCGCCGACCGCCTCGCTCCCGCCT
CGGGTTGCTGTTCTGGCTGAGGCCATCTATGGCCCTGGTAGTGTTTTCATTCAAGACAAAGTCC
ATTCCATCTTTATTTATTAGCTGAGCAAATTCAGCTAATAATTTTCAAGACCCAGATTCAAGCA
ATAAAACATTTCTCTGCAATACCATGTGGTTTTCTTCAACATCATAATTCTATGGGGAGGAAGC
ATGTAGGATCCATGAAGCACAGGACATTCAAGCCTCCCGCCCGCGTCACCAGGAAGATCTCTTT
GTAAGAATAACCACAGGATTGATTTCCAGAGAGATTAGCCTGTCTGAAGCATTATGTGTTGAAG
CAAAAGAAACCTATTTTCTTGTGTGGCTAACTAGAACCAGAGTACAATGTTTCCAGTTCTTTGA
GCTCCAGGAAGATAGAGGACAGAGTTGAAACTCTGAAAATGCGGGCATGGACTGGTTCCTGGCG
TTGGATTATGCTCATTCTTTTTGCCTGGGGGACCTTGTTATTTTATATAGGTGGTCATTTGGTT
CGAGATAATGACCACCCTGATCACTCCAGCAGAGAACTCTCCAAGATTCTTGCAAAGCTTGAAC
GCTTAAAACAGCAAAATGAAGACTTGAGGCGAATGGCTGAGTCTCTCCGAATACCAGAAGGCCC
CATTGACCAGGGGACAGCTACAGGAAGAGTCCGTGTTTTAGAAGAACAGCTTGTTAAGGCCAAA
GAACAGATTGAAAATTACAAGAAACAAGCTAGAAATGGTCTGGGGAAGGATCATGAAATCTTAA
GAAGGAGGATTGAAAATGGAGCTAAAGAGCTCTGGTTTTTTCTACAAAGCGAACTGAAGAAATT
AAAGCATTTAGAAGGAAATGAACTCCAAAGACATGCAGATGAAATTCTTTTGGATTTAGGACAC
CATGAAAGGTCTATCATGACAGATCTATACTACCTCAGTCAAACAGATGGAGCAGGGGATTGGC
GTGAAAAAGAGGCCAAAGATCTGACAGAGCTGGTCCAGCGGAGAATAACATATCTCCAGAATCC
TAAGGACTGCAGCAAAGCCAGGAAGCTGGTGTGTAACATCAATAAAGGCTGTGGCTATGGTTGT
CAACTCCATCACGTGGTCTACTGTTTCATGATTGCTTATGGCACCCAGCGAACACTCATCTTGG
AATCTCAGAATTGGCGCTATGCTACTGGTGGATGGGAGACTGTGTTTAGACCTGTAAGTGAGAC
ATGTACAGACAGATCTGGCCTCTCCACTGGACACTGGTCAGGTGAAGTAAATGACAAAAACATT
CAAGTGGTCGAGCTCCCCATTGTAGACAGCCTCCATCCTCGGCCTCCTTACTTACCACTGGCTG
TTCCAGAAGACCTTGCAGACCGACTCCTAAGAGTCCATGGTGACCCTGCAGTGTGGTGGGTGTC
CCAGTTTGTCAAATACTTGATTCGTCCACAACCTTGGCTGGAAAAGGAAATAGAAGAAGCCACC
AAGAAGCTTGGCTTCAAACATCCAGTTATTGGAGTCCATGTCAGACGCACAGACAAAGTGGGAA
CAGAAGCAGCCTTCCACCCCATCGAGGAGTACATGGTACACGTTGAAGAACATTTTCAGCTTCT
CGCACGCAGAATGCAAGTGGATAAAAAAAGAGTATATCTGGCTACTGATGATCCTACTTTGTTA
AAGGAGGCAAAGACAAAGTACTCCAATTATGAATTTATTAGTGATAACTCTATTTCTTGGTCAG
CTGGACTACACAATCGGTACACAGAAAATTCACTTCGGGGTGTGATCCTGGATATACACTTTCT
CTCACAGGCTGACTTTCTAGTGTGTACTTTTTCATCCCAGGTCTGTCGGGTTGCTTATGAAATC
ATGCAAACCCTGCATCCTGATGCCTCTGCGAACTTCCATTCTTTGGATGACATCTACTATTTTG
GAGGCCAAAATGCCCACAATCAGATTGCTGTTTATCCTCACAAACCTCGAACTGAAGAGGAAAT
TCCAATGGAACCTGGAGATATCATTGGTGTGGCTGGAAACCATTGGGATGGTTATTCTAAAGGT
ATCAACAGAAAACTTGGAAAAACAGGCTTATATCCCTCCTACAAAGTCCGAGAGAAGATAGAAA
CAGTCAAGTATCCCACATATCCTGAAGCTGAAAAATAGAGATGAAGTAGAAGAGATTAACAACA
GAACTCACTTCAGACCATCTCGGCCAAGCAGAAGACGCAGACTAACACGTGGTTCATTGATAGA
CACGCTCCACACCAAGAGCAAGCGGGAACCCTCAGATGCTGCACTGGTGGAACGCCTCTTTATG
AAGGGCTGTGGTGCCCTCAAGCCCATACACAGTACAATAATGTACTCACACATAACACGCAAAG
GGATTATTTTCTACTTTGCCCCTTTAAATATTATGTCCCCATTGAACAAACACTGCCACATTGT
GTAATTTAAGTGACACAGACATTTTGTGTGAGACTTAAAACATGGTGCCTATATCTGAGAGACC
TCTGTGACTTACCGAGAAGATGTGAACAGCTCCCTTCTCTGGGGAAGCTGGTGGTGGTGTGGCC
ACTGAATTCACTCCAGTCAACAGATTCAAAATGAGAATGGATGTTTTTCCTTTATATGGTTGTC
TGGATTTTTTTTTAAGTAATTTCATCAGTTCAGTTTATCCACCTCATCATTAATAAATGAAGGA
TGCATCAATAAAATAAAATGAAATATTCACTCTCCATTAGGAAGTTTTGTAAAACAATGCCATG
AACAAATTCTTTAGTACTCAATGTTTCTGGACATTCTCTTTGATAACAAAAAAATAAATTTCAA
AAAGGAATTTTGTG

hide sequence

Protein Sequences


Protein RefSeqs	NP_001239543	(Get FASTA)	NCBI Sequence Viewer
	NP_001239544	(Get FASTA)	NCBI Sequence Viewer
	NP_001239545	(Get FASTA)	NCBI Sequence Viewer
	NP_058589	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH10666	(Get FASTA)	NCBI Sequence Viewer
	ABV44380	(Get FASTA)	NCBI Sequence Viewer
	ABV44381	(Get FASTA)	NCBI Sequence Viewer
	BAA76392	(Get FASTA)	NCBI Sequence Viewer
	BAC33357	(Get FASTA)	NCBI Sequence Viewer
	BAC34777	(Get FASTA)	NCBI Sequence Viewer
	BAE22175	(Get FASTA)	NCBI Sequence Viewer
	CAV31715	(Get FASTA)	NCBI Sequence Viewer
	EDL36441	(Get FASTA)	NCBI Sequence Viewer
	EDL36442	(Get FASTA)	NCBI Sequence Viewer
	EDL36443	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000054530.8
	ENSMUSP00000130845
	ENSMUSP00000130845.3
	ENSMUSP00000136327
	ENSMUSP00000136327.2
GenBank Protein	Q9WTS2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_058589 ⟸ NM_016893
- Peptide Label:	isoform 1
- UniProtKB:	Q543F5 (UniProtKB/Swiss-Prot), Q921U1 (UniProtKB/Swiss-Prot), Q9WTS2 (UniProtKB/Swiss-Prot), Q3UYN7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRAWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDLRRMA ESLRIPEGPIDQGTATGRVRVLEEQLVKAKEQIENYKKQARNGLGKDHEILRRRIENGAKELWF FLQSELKKLKHLEGNELQRHADEILLDLGHHERSIMTDLYYLSQTDGAGDWREKEAKDLTELVQ RRITYLQNPKDCSKARKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWE TVFRPVSETCTDRSGLSTGHWSGEVNDKNIQVVELPIVDSLHPRPPYLPLAVPEDLADRLLRVH GDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMV HVEEHFQLLARRMQVDKKRVYLATDDPTLLKEAKTKYSNYEFISDNSISWSAGLHNRYTENSLR GVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAVYP HKPRTEEEIPMEPGDIIGVAGNHWDGYSKGINRKLGKTGLYPSYKVREKIETVKYPTYPEAEK hide sequence

RefSeq Acc Id:	NP_001239543 ⟸ NM_001252614
- Peptide Label:	isoform 1
- UniProtKB:	Q543F5 (UniProtKB/Swiss-Prot), Q921U1 (UniProtKB/Swiss-Prot), Q9WTS2 (UniProtKB/Swiss-Prot), Q3UYN7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRAWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDLRRMA ESLRIPEGPIDQGTATGRVRVLEEQLVKAKEQIENYKKQARNGLGKDHEILRRRIENGAKELWF FLQSELKKLKHLEGNELQRHADEILLDLGHHERSIMTDLYYLSQTDGAGDWREKEAKDLTELVQ RRITYLQNPKDCSKARKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWE TVFRPVSETCTDRSGLSTGHWSGEVNDKNIQVVELPIVDSLHPRPPYLPLAVPEDLADRLLRVH GDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMV HVEEHFQLLARRMQVDKKRVYLATDDPTLLKEAKTKYSNYEFISDNSISWSAGLHNRYTENSLR GVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAVYP HKPRTEEEIPMEPGDIIGVAGNHWDGYSKGINRKLGKTGLYPSYKVREKIETVKYPTYPEAEK hide sequence

RefSeq Acc Id:	NP_001239544 ⟸ NM_001252615
- Peptide Label:	isoform 2
- UniProtKB:	B2X2D7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTDLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKARKLVCNINKGCGYGCQLHHV VYCFMIAYGTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGLSTGHWSGEVNDKNIQVVEL PIVDSLHPRPPYLPLAVPEDLADRLLRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGF KHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPTLLKEAKT KYSNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLH PDASANFHSLDDIYYFGGQNAHNQIAVYPHKPRTEEEIPMEPGDIIGVAGNHWDGYSKGINRKL GKTGLYPSYKVREKIETVKYPTYPEAEK hide sequence

RefSeq Acc Id:	NP_001239545 ⟸ NM_001252616
- Peptide Label:	isoform 3
- UniProtKB:	B2X2D8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLLNLGLGSQNPKDCSKARKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQNWRYATG GWETVFRPVSETCTDRSGLSTGHWSGEVNDKNIQVVELPIVDSLHPRPPYLPLAVPEDLADRLL RVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFKHPVIGVHVRRTDKVGTEAAFHPIEE YMVHVEEHFQLLARRMQVDKKRVYLATDDPTLLKEAKTKYSNYEFISDNSISWSAGLHNRYTEN SLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIA VYPHKPRTEEEIPMEPGDIIGVAGNHWDGYSKGINRKLGKTGLYPSYKVREKIETVKYPTYPEA EK hide sequence

Ensembl Acc Id:

ENSMUSP00000136327 ⟸ ENSMUST00000177595

Ensembl Acc Id:

ENSMUSP00000130845 ⟸ ENSMUST00000171770

Ensembl Acc Id:

ENSMUSP00000054530 ⟸ ENSMUST00000062804

Protein Domains

GT23 SH3

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9WTS2-F1-model_v2	AlphaFold	Q9WTS2	1-575	view protein structure

Promoters

RGD ID:

8678606

Promoter ID:

EPDNEW_M17333

Type:

initiation region

Name:

Fut8_2

Description:

Mus musculus fucosyltransferase 8 , transcript variant 4, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M17334 EPDNEW_M17335

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	12	77,238,101 - 77,238,161	EPDNEW

RGD ID:

8678608

Promoter ID:

EPDNEW_M17334

Type:

initiation region

Name:

Fut8_1

Description:

Mus musculus fucosyltransferase 8 , transcript variant 4, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M17333 EPDNEW_M17335

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	12	77,238,781 - 77,238,841	EPDNEW

RGD ID:

8678610

Promoter ID:

EPDNEW_M17335

Type:

initiation region

Name:

Fut8_3

Description:

Mus musculus fucosyltransferase 8 , transcript variant 4, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M17333 EPDNEW_M17334

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	12	77,239,065 - 77,239,125	EPDNEW

RGD ID:

6822962

Promoter ID:

MM_KWN:12008

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_2Hour

Transcripts:

UC007NYY.1, UC007NYZ.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	12	78,338,886 - 78,339,386 (+)	MPROMDB

RGD ID:

6822963

Promoter ID:

MM_KWN:12009

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day3, BoneMarrow_0Hour, Brain, ES_Cell, Lung, MEF_B4, Spleen

Transcripts:

ENSMUST00000062804, UC007NZA.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	12	78,339,631 - 78,340,131 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1858901	AgrOrtholog
Ensembl Genes	ENSMUSG00000021065	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000062804.8	UniProtKB/Swiss-Prot
	ENSMUST00000171770	ENTREZGENE
	ENSMUST00000171770.10	UniProtKB/Swiss-Prot
	ENSMUST00000177595	ENTREZGENE
	ENSMUST00000177595.9	UniProtKB/Swiss-Prot
	ENSMUST00000218851	ENTREZGENE
	ENSMUST00000219299	ENTREZGENE
Gene3D-CATH	3.40.50.11350	UniProtKB/Swiss-Prot
	ESAT-6-like	UniProtKB/Swiss-Prot
	SH3 Domains	UniProtKB/Swiss-Prot
InterPro	Fut8	UniProtKB/Swiss-Prot
	Fut8_N_cat	UniProtKB/Swiss-Prot
	Fut8_SH3	UniProtKB/Swiss-Prot
	GT23_dom	UniProtKB/Swiss-Prot
	SH3-like_dom_sf	UniProtKB/Swiss-Prot
	SH3_domain	UniProtKB/Swiss-Prot
KEGG Report	mmu:53618	UniProtKB/Swiss-Prot
MGD	MGI:1858901	ENTREZGENE
NCBI Gene	53618	ENTREZGENE
PANTHER	ALPHA- 1,6 -FUCOSYLTRANSFERASE	UniProtKB/Swiss-Prot
	ALPHA-(1,6)-FUCOSYLTRANSFERASE	UniProtKB/Swiss-Prot
Pfam	FUT8_N_cat	UniProtKB/Swiss-Prot
	SH3_9	UniProtKB/Swiss-Prot
PhenoGen	Fut8	PhenoGen
PIRSF	Alpha1_6FUT_euk	UniProtKB/Swiss-Prot
PROSITE	GT23	UniProtKB/Swiss-Prot
	SH3	UniProtKB/Swiss-Prot
SMART	SH3	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF50044	UniProtKB/Swiss-Prot
UniProt	B2X2D7	ENTREZGENE, UniProtKB/TrEMBL
	B2X2D8	ENTREZGENE, UniProtKB/TrEMBL
	FUT8_MOUSE	UniProtKB/Swiss-Prot
	Q3UYN7	ENTREZGENE, UniProtKB/TrEMBL
	Q543F5	ENTREZGENE
	Q921U1	ENTREZGENE
	Q9WTS2	ENTREZGENE
UniProt Secondary	Q543F5	UniProtKB/Swiss-Prot
	Q921U1	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)

Mammalian Phenotype