Chrd (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 16 | 20,551,528 - 20,561,132 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 20,551,877 - 20,561,134 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 20,731,425 - 20,742,384 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 20,733,127 - 20,742,384 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 20,733,200 - 20,742,457 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 20,646,670 - 20,655,925 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 21,298,477 - 21,307,717 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | B1 | NCBI | | | | | cM Map | 16 | 12.51 | NCBI | | | | |
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CHRD (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 184,380,054 - 184,390,739 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 184,380,054 - 184,390,736 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 184,097,842 - 184,108,527 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 185,580,555 - 185,590,311 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 185,580,562 - 185,590,320 | NCBI | | | | | Celera | 3 | 182,538,936 - 182,548,675 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q27.1 | NCBI | | | | | HuRef | 3 | 181,483,159 - 181,513,643 (+) | NCBI | | HuRef | | | CHM1_1 | 3 | 184,062,275 - 184,072,053 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 187,189,309 - 187,199,979 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Chrd (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 11 | 93,676,400 - 93,685,584 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 80,171,994 - 80,181,166 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 80,171,994 - 80,180,673 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 11 | 88,894,706 - 88,903,406 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 81,548,122 - 81,556,822 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 80,609,184 - 80,617,884 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 83,858,503 - 83,867,543 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 83,858,503 - 83,867,203 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 86,930,421 - 86,939,186 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 82,401,701 - 82,410,401 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 11 | 82,460,992 - 82,462,358 (-) | NCBI | | | | | Celera | 11 | 79,011,743 - 79,020,443 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q23 | NCBI | | | | |
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Chrd (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955420 | 23,112,093 - 23,120,036 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955420 | 23,111,690 - 23,120,038 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CHRD (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 182,252,887 - 182,262,820 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 182,257,731 - 182,267,537 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 181,417,140 - 181,460,236 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 189,899,342 - 189,908,573 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 189,898,856 - 189,908,573 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CHRD (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 34 | 17,255,770 - 17,264,776 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 34 | 17,255,562 - 17,271,713 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 34 | 21,341,312 - 21,350,291 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 34 | 17,163,252 - 17,172,231 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 34 | 17,163,252 - 17,171,973 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 34 | 17,200,125 - 17,209,104 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 34 | 17,196,194 - 17,205,174 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 34 | 17,425,160 - 17,434,173 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Chrd (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405602 | 119,406,169 - 119,415,345 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936578 | 5,498,887 - 5,507,198 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936578 | 5,498,473 - 5,507,195 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CHRD (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 122,266,626 - 122,277,645 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 122,266,632 - 122,277,513 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 131,758,103 - 131,767,009 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CHRD (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 15 | 5,030,618 - 5,040,399 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 15 | 5,030,457 - 5,039,991 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666063 | 13,808,558 - 13,818,236 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Chrd (Heterocephalus glaber - naked mole-rat) |
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