Ociad1 (OCIA domain containing 1) - Rat Genome Database

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Gene: Ociad1 (OCIA domain containing 1) Mus musculus
Analyze
Symbol: Ociad1
Name: OCIA domain containing 1
RGD ID: 1550314
MGI Page MGI
Description: Involved in regulation of stem cell differentiation. Located in endosome. Is expressed in several structures, including cardiovascular system; early conceptus; gonad; limb bud; and trunk mesenchyme. Orthologous to human OCIAD1 (OCIA domain containing 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 6030432N09Rik; A; AI481327; Asrij; AW557942; B230209J16Rik; BB021357; Emi; Emi2; expressed during mesenchymal induction 2; Im; Imi2; induced during mesenchymal induction 2; OCIA; OCIA domain-containing protein 1; TPA0; TPA018
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39573,450,093 - 73,471,420 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl573,450,127 - 73,471,412 (+)EnsemblGRCm39 Ensembl
GRCm38573,292,769 - 73,314,077 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl573,292,784 - 73,314,069 (+)EnsemblGRCm38mm10GRCm38
MGSCv37573,684,033 - 73,705,316 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36573,571,959 - 73,593,219 (+)NCBIMGSCv36mm8
Celera570,547,592 - 70,568,648 (+)NCBICelera
Cytogenetic Map5C3.2NCBI
cM Map538.44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
endosome  (IBA,IDA)
mitochondrion  (HDA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Embryonic stem cell and tissue-specific expression of a novel conserved gene, asrij. Mukhopadhyay A, etal., Dev Dyn 2003 Aug;227(4):578-86.
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10844592   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:18614015   PMID:18799693   PMID:21267068   PMID:21779533   PMID:21873635   PMID:23972987   PMID:25737280   PMID:27113764   PMID:30952670   PMID:31931285   PMID:32554809  
PMID:36808153   PMID:37669129   PMID:38355793  


Genomics

Comparative Map Data
Ociad1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39573,450,093 - 73,471,420 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl573,450,127 - 73,471,412 (+)EnsemblGRCm39 Ensembl
GRCm38573,292,769 - 73,314,077 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl573,292,784 - 73,314,069 (+)EnsemblGRCm38mm10GRCm38
MGSCv37573,684,033 - 73,705,316 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36573,571,959 - 73,593,219 (+)NCBIMGSCv36mm8
Celera570,547,592 - 70,568,648 (+)NCBICelera
Cytogenetic Map5C3.2NCBI
cM Map538.44NCBI
OCIAD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38448,805,156 - 48,861,815 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl448,805,212 - 48,861,817 (+)EnsemblGRCh38hg38GRCh38
GRCh37448,833,105 - 48,863,832 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36448,527,772 - 48,558,589 (+)NCBINCBI36Build 36hg18NCBI36
Build 34448,674,032 - 48,704,191NCBI
Celera449,281,441 - 49,312,217 (+)NCBICelera
Cytogenetic Map4p11NCBI
HuRef448,152,833 - 48,183,618 (+)NCBIHuRef
CHM1_1448,832,196 - 48,862,985 (+)NCBICHM1_1
T2T-CHM13v2.0448,797,241 - 48,828,402 (+)NCBIT2T-CHM13v2.0
Ociad1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81435,251,891 - 35,269,440 (-)NCBIGRCr8
mRatBN7.21434,897,851 - 34,915,291 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1434,897,847 - 34,915,286 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1435,262,363 - 35,279,725 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01436,567,122 - 36,584,484 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01435,055,447 - 35,072,810 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01437,458,023 - 37,475,485 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1437,458,029 - 37,475,418 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01437,276,455 - 37,293,910 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41437,301,310 - 37,318,693 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11437,303,745 - 37,321,128 (-)NCBI
Celera1434,156,121 - 34,173,877 (-)NCBICelera
Cytogenetic Map14p11NCBI
Ociad1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544718,844,270 - 18,870,368 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544718,844,270 - 18,870,368 (-)NCBIChiLan1.0ChiLan1.0
OCIAD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2379,004,731 - 79,034,657 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1479,266,388 - 79,296,271 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0473,293,733 - 73,323,889 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1484,022,714 - 84,052,802 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl484,022,716 - 84,052,739 (-)Ensemblpanpan1.1panPan2
OCIAD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11344,608,474 - 44,634,665 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1344,565,044 - 44,634,263 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1344,560,897 - 44,587,081 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01345,211,167 - 45,237,366 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1345,211,132 - 45,237,484 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11344,886,280 - 44,912,850 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01344,421,306 - 44,447,489 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01345,300,618 - 45,326,814 (+)NCBIUU_Cfam_GSD_1.0
Ociad1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528531,492,528 - 31,517,951 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648214,780,326 - 14,807,182 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648214,780,284 - 14,805,718 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OCIAD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl838,745,338 - 38,769,253 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1838,745,415 - 38,769,255 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2840,854,812 - 40,876,447 (+)NCBISscrofa10.2Sscrofa10.2susScr3
OCIAD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1271,394,512 - 1,424,286 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl271,391,852 - 1,424,270 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604747,384,844 - 47,414,633 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ociad1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476118,144,270 - 18,171,205 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ociad1
514 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1122
Count of miRNA genes:556
Interacting mature miRNAs:676
Transcripts:ENSMUST00000031038, ENSMUST00000071081, ENSMUST00000166823
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301843Listr1_mlisteriosis resistance 1 (mouse)Not determined56024608194246203Mouse
10043993Hbnr10_mHeligmosomoides bakeri nematode resistance 10 (mouse)Not determined572418876106419011Mouse
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572857343139985755Mouse
4140990Lgq6_mlate growth QTL 6 (mouse)Not determined32133234100777931Mouse
1301010ahl2_mage related hearing loss 2 (mouse)Not determined56265056896650688Mouse
11041899Lmr24a_mleishmaniasis resistance 24a (mouse)552694462107321041Mouse
14746981Manh57_mmandible shape 57 (mouse)54716974281169742Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
10045972Tir5_mtrypanosome infection response 5 (mouse)Not determined563705442104387065Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
1301698Pcfm4_mperiosteal circumference and femur length 4 (mouse)Not determined54458584378585965Mouse
4142317Rgcs1_mretinal ganglion cell susceptible 1 (mouse)Not determined55388334108762627Mouse
4141219W10q16_mweight 10 weeks QTL 16 (mouse)Not determined32133234100777931Mouse
12904740M1fscn2_mmodifier 1 of Fscn2 (mouse)566529661100529661Mouse
10043962Obq27_mobesity QTL 27 (mouse)Not determined55628565590285655Mouse
4142428Modvl1_mmodifier of vacuolated lens 1 (mouse)Not determined6265056896650688Mouse
11040589Lmr3a_mleishmaniasis resistance 3a (mouse)55960280193602980Mouse
11040590Lmr3b_mleishmaniasis resistance 3b (mouse)55960280193602980Mouse
11040591Lmr3c_mleishmaniasis resistance 3c (mouse)55960280193602980Mouse
12904739M2fscn2_mmodifier 2 of FSCN2 (mouse)566529661100529661Mouse
1301243Bmd2_mbone mineral density 2 (mouse)Not determined555388334100455525Mouse
13207584Mwmlpt4_mMorris water maze latency to platform, training, 4 (mouse)54632260680322606Mouse
11041665Lmr24_mleishmaniasis resistance 24 (mouse)552694462107321041Mouse
13207588Mwmlpa4_mMorris water maze latency to platform, all, 4 (mouse)54632260680322606Mouse
1301693Sle6_msystemic lupus erythematosus susceptibility 6 (mouse)Not determined5889069387841837Mouse
11049560Lmr24d_mleishmaniasis resistance 24d (mouse)56437487798374996Mouse
26884395Humsd2_mhumerus midshaft diameter 2, 10 week (mouse)570057343132528839Mouse
13464248Ahl13_mage related hearing loss, early onset 13 (mouse)55564587489645995Mouse
11252124Modvl6_mmodifier of vacuolated lens 6 (mouse)56265056896650688Mouse
13464250Ahl15_mage related hearing loss, early onset 15 (mouse)56265056896650688Mouse
11040592Lmr3d_mleishmaniasis resistance 3d (mouse)55960280193602980Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
13464247Ahl14_mage related hearing loss, early onset 14 (mouse)56040306294403160Mouse
10412069Desp3_mdespair 3 (mouse)Not determined57293268477246203Mouse
10044005Ahl7_mage related hearing loss 7 (mouse)Not determined55833050292330641Mouse

Markers in Region
AW557942  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38573,313,785 - 73,313,898UniSTSGRCm38
MGSCv37573,705,024 - 73,705,137UniSTSGRCm37
Cytogenetic Map5C3.2UniSTS
Whitehead/MRC_RH5899.85UniSTS
AI481327  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38573,309,018 - 73,309,101UniSTSGRCm38
MGSCv37573,700,257 - 73,700,340UniSTSGRCm37
Celera570,563,818 - 70,563,901UniSTS
Cytogenetic Map5C3.2UniSTS
Whitehead/MRC_RH5900.05UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001159887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001159888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001159889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_023429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003955702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_376823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC108828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF295357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF295358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK006013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080803 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY208935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX238085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX238454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000031038   ⟹   ENSMUSP00000031038
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl573,450,135 - 73,471,412 (+)Ensembl
GRCm38.p6 Ensembl573,292,792 - 73,314,069 (+)Ensembl
Ensembl Acc Id: ENSMUST00000071081   ⟹   ENSMUSP00000069412
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl573,450,127 - 73,471,300 (+)Ensembl
GRCm38.p6 Ensembl573,292,784 - 73,313,957 (+)Ensembl
Ensembl Acc Id: ENSMUST00000166823   ⟹   ENSMUSP00000128805
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl573,450,136 - 73,466,708 (+)Ensembl
GRCm38.p6 Ensembl573,292,793 - 73,309,365 (+)Ensembl
Ensembl Acc Id: ENSMUST00000200935   ⟹   ENSMUSP00000144515
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl573,450,238 - 73,471,284 (+)Ensembl
GRCm38.p6 Ensembl573,292,895 - 73,313,941 (+)Ensembl
Ensembl Acc Id: ENSMUST00000201191
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl573,461,470 - 73,462,502 (+)Ensembl
GRCm38.p6 Ensembl573,304,127 - 73,305,159 (+)Ensembl
Ensembl Acc Id: ENSMUST00000201505   ⟹   ENSMUSP00000143869
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl573,450,396 - 73,452,322 (+)Ensembl
GRCm38.p6 Ensembl573,293,053 - 73,294,979 (+)Ensembl
Ensembl Acc Id: ENSMUST00000201556   ⟹   ENSMUSP00000144227
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl573,450,175 - 73,471,257 (+)Ensembl
GRCm38.p6 Ensembl573,292,832 - 73,313,914 (+)Ensembl
Ensembl Acc Id: ENSMUST00000201739   ⟹   ENSMUSP00000143867
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl573,452,346 - 73,471,284 (+)Ensembl
GRCm38.p6 Ensembl573,295,003 - 73,313,941 (+)Ensembl
Ensembl Acc Id: ENSMUST00000202237   ⟹   ENSMUSP00000144102
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl573,450,184 - 73,467,759 (+)Ensembl
GRCm38.p6 Ensembl573,292,841 - 73,310,416 (+)Ensembl
Ensembl Acc Id: ENSMUST00000202250   ⟹   ENSMUSP00000143799
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl573,450,150 - 73,464,123 (+)Ensembl
GRCm38.p6 Ensembl573,292,807 - 73,306,780 (+)Ensembl
RefSeq Acc Id: NM_001159887   ⟹   NP_001153359
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,137 - 73,471,420 (+)NCBI
GRCm38573,292,794 - 73,314,077 (+)NCBI
MGSCv37573,684,033 - 73,705,316 (+)RGD
Celera570,547,592 - 70,568,648 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001159888   ⟹   NP_001153360
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,137 - 73,471,420 (+)NCBI
GRCm38573,292,794 - 73,314,077 (+)NCBI
MGSCv37573,684,033 - 73,705,316 (+)RGD
Celera570,547,592 - 70,568,648 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001159889   ⟹   NP_001153361
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,137 - 73,466,699 (+)NCBI
GRCm38573,292,794 - 73,309,356 (+)NCBI
MGSCv37573,684,033 - 73,705,316 (+)RGD
Celera570,547,592 - 70,568,648 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_023429   ⟹   NP_075918
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,137 - 73,471,420 (+)NCBI
GRCm38573,292,794 - 73,314,077 (+)NCBI
MGSCv37573,684,033 - 73,705,316 (+)RGD
Celera570,547,592 - 70,568,648 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006504075   ⟹   XP_006504138
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,118 - 73,471,288 (+)NCBI
GRCm38573,292,772 - 73,313,945 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006504076   ⟹   XP_006504139
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,389 - 73,471,288 (+)NCBI
GRCm38573,293,028 - 73,313,945 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017321082   ⟹   XP_017176571
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,117 - 73,471,288 (+)NCBI
GRCm38573,292,769 - 73,313,945 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017321083   ⟹   XP_017176572
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,117 - 73,471,288 (+)NCBI
GRCm38573,292,769 - 73,313,945 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254778   ⟹   XP_030110638
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,372 - 73,470,160 (+)NCBI
GRCm38573,293,028 - 73,313,945 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254779   ⟹   XP_030110639
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,118 - 73,471,288 (+)NCBI
GRCm38573,292,772 - 73,313,945 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254780   ⟹   XP_030110640
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,117 - 73,471,288 (+)NCBI
GRCm38573,292,769 - 73,313,945 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165449   ⟹   XP_036021342
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,093 - 73,470,160 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165450   ⟹   XP_036021343
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,117 - 73,470,160 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165451   ⟹   XP_036021344
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,117 - 73,470,160 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165452   ⟹   XP_036021345
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,382 - 73,470,160 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165453   ⟹   XP_036021346
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,373 - 73,471,288 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165454   ⟹   XP_036021347
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,382 - 73,471,288 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165455   ⟹   XP_036021348
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,381 - 73,471,288 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001784740
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,117 - 73,471,285 (+)NCBI
GRCm38573,292,769 - 73,313,942 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003955702
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,366 - 73,471,285 (+)NCBI
GRCm38573,293,023 - 73,313,942 (+)NCBI
Sequence:
RefSeq Acc Id: XR_376823
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39573,450,093 - 73,471,285 (+)NCBI
GRCm38573,292,771 - 73,313,942 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001153359 (Get FASTA)   NCBI Sequence Viewer  
  NP_001153360 (Get FASTA)   NCBI Sequence Viewer  
  NP_001153361 (Get FASTA)   NCBI Sequence Viewer  
  NP_075918 (Get FASTA)   NCBI Sequence Viewer  
  XP_006504138 (Get FASTA)   NCBI Sequence Viewer  
  XP_006504139 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176571 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176572 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110638 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110639 (Get FASTA)   NCBI Sequence Viewer  
  XP_030110640 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021342 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021343 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021344 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021345 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021346 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021347 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021348 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAG59858 (Get FASTA)   NCBI Sequence Viewer  
  AAG59859 (Get FASTA)   NCBI Sequence Viewer  
  AAH06937 (Get FASTA)   NCBI Sequence Viewer  
  AAP41523 (Get FASTA)   NCBI Sequence Viewer  
  BAB24366 (Get FASTA)   NCBI Sequence Viewer  
  BAB25152 (Get FASTA)   NCBI Sequence Viewer  
  BAC31593 (Get FASTA)   NCBI Sequence Viewer  
  BAC37055 (Get FASTA)   NCBI Sequence Viewer  
  BAC37125 (Get FASTA)   NCBI Sequence Viewer  
  BAC37453 (Get FASTA)   NCBI Sequence Viewer  
  BAC38024 (Get FASTA)   NCBI Sequence Viewer  
  BAC38610 (Get FASTA)   NCBI Sequence Viewer  
  BAC38616 (Get FASTA)   NCBI Sequence Viewer  
  BAE35391 (Get FASTA)   NCBI Sequence Viewer  
  BAE39422 (Get FASTA)   NCBI Sequence Viewer  
  BAE41326 (Get FASTA)   NCBI Sequence Viewer  
  EDL37847 (Get FASTA)   NCBI Sequence Viewer  
  EDL37848 (Get FASTA)   NCBI Sequence Viewer  
  EDL37849 (Get FASTA)   NCBI Sequence Viewer  
  EDL37850 (Get FASTA)   NCBI Sequence Viewer  
  EDL37851 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000031038
  ENSMUSP00000031038.5
  ENSMUSP00000069412
  ENSMUSP00000069412.7
  ENSMUSP00000128805
  ENSMUSP00000128805.2
  ENSMUSP00000143799
  ENSMUSP00000143799.2
  ENSMUSP00000143867.2
  ENSMUSP00000143869.2
  ENSMUSP00000144102.2
  ENSMUSP00000144227.2
  ENSMUSP00000144515
  ENSMUSP00000144515.2
GenBank Protein Q9CRD0 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_075918   ⟸   NM_023429
- Peptide Label: isoform 1
- UniProtKB: Q7TNB3 (UniProtKB/Swiss-Prot),   Q3TJS3 (UniProtKB/Swiss-Prot),   Q3TEC2 (UniProtKB/Swiss-Prot),   Q922M2 (UniProtKB/Swiss-Prot),   Q9CRD0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001153359   ⟸   NM_001159887
- Peptide Label: isoform 2
- UniProtKB: Q9CRD0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001153360   ⟸   NM_001159888
- Peptide Label: isoform 3
- UniProtKB: Q9CRD0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001153361   ⟸   NM_001159889
- Peptide Label: isoform 3
- UniProtKB: Q9CRD0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006504138   ⟸   XM_006504075
- Peptide Label: isoform X2
- UniProtKB: Q7TNB3 (UniProtKB/Swiss-Prot),   Q3TJS3 (UniProtKB/Swiss-Prot),   Q3TEC2 (UniProtKB/Swiss-Prot),   Q922M2 (UniProtKB/Swiss-Prot),   Q9CRD0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006504139   ⟸   XM_006504076
- Peptide Label: isoform X2
- UniProtKB: Q7TNB3 (UniProtKB/Swiss-Prot),   Q3TJS3 (UniProtKB/Swiss-Prot),   Q3TEC2 (UniProtKB/Swiss-Prot),   Q922M2 (UniProtKB/Swiss-Prot),   Q9CRD0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017176571   ⟸   XM_017321082
- Peptide Label: isoform X3
- UniProtKB: Q9CRD0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017176572   ⟸   XM_017321083
- Peptide Label: isoform X4
- UniProtKB: Q9CRD0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030110640   ⟸   XM_030254780
- Peptide Label: isoform X4
RefSeq Acc Id: XP_030110639   ⟸   XM_030254779
- Peptide Label: isoform X2
- UniProtKB: Q9CRD0 (UniProtKB/Swiss-Prot),   Q7TNB3 (UniProtKB/Swiss-Prot),   Q3TJS3 (UniProtKB/Swiss-Prot),   Q3TEC2 (UniProtKB/Swiss-Prot),   Q922M2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_030110638   ⟸   XM_030254778
- Peptide Label: isoform X1
Ensembl Acc Id: ENSMUSP00000069412   ⟸   ENSMUST00000071081
Ensembl Acc Id: ENSMUSP00000143799   ⟸   ENSMUST00000202250
Ensembl Acc Id: ENSMUSP00000144102   ⟸   ENSMUST00000202237
Ensembl Acc Id: ENSMUSP00000031038   ⟸   ENSMUST00000031038
Ensembl Acc Id: ENSMUSP00000128805   ⟸   ENSMUST00000166823
Ensembl Acc Id: ENSMUSP00000143869   ⟸   ENSMUST00000201505
Ensembl Acc Id: ENSMUSP00000144227   ⟸   ENSMUST00000201556
Ensembl Acc Id: ENSMUSP00000143867   ⟸   ENSMUST00000201739
Ensembl Acc Id: ENSMUSP00000144515   ⟸   ENSMUST00000200935
RefSeq Acc Id: XP_036021342   ⟸   XM_036165449
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036021344   ⟸   XM_036165451
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036021343   ⟸   XM_036165450
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036021346   ⟸   XM_036165453
- Peptide Label: isoform X2
- UniProtKB: Q9CRD0 (UniProtKB/Swiss-Prot),   Q7TNB3 (UniProtKB/Swiss-Prot),   Q3TJS3 (UniProtKB/Swiss-Prot),   Q3TEC2 (UniProtKB/Swiss-Prot),   Q922M2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_036021348   ⟸   XM_036165455
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036021347   ⟸   XM_036165454
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036021345   ⟸   XM_036165452
- Peptide Label: isoform X1
Protein Domains
OCIA

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9CRD0-F1-model_v2 AlphaFold Q9CRD0 1-247 view protein structure

Promoters
RGD ID:6886882
Promoter ID:EPDNEW_M6892
Type:initiation region
Name:Ociad1_1
Description:Mus musculus OCIA domain containing 1 , transcript variant 3,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38573,292,813 - 73,292,873EPDNEW
RGD ID:6837987
Promoter ID:MM_KWN:42548
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000031038,   ENSMUST00000071081,   NM_001159888,   UC008XSS.1,   UC008XST.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36573,683,734 - 73,684,234 (+)MPROMDB
RGD ID:6849181
Promoter ID:MM_XEF:5465
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B6
Transcripts:NM_001015648,   NM_001079839,   NM_001079840,   NM_001079841,   NM_001079842,   NM_001131670,   NM_001168254,   NM_017830
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36573,684,321 - 73,684,821 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915345 AgrOrtholog
Ensembl Genes ENSMUSG00000029152 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000031038 ENTREZGENE
  ENSMUST00000031038.11 UniProtKB/Swiss-Prot
  ENSMUST00000071081 ENTREZGENE
  ENSMUST00000071081.13 UniProtKB/Swiss-Prot
  ENSMUST00000166823 ENTREZGENE
  ENSMUST00000166823.5 UniProtKB/Swiss-Prot
  ENSMUST00000200935 ENTREZGENE
  ENSMUST00000200935.4 UniProtKB/Swiss-Prot
  ENSMUST00000201505.2 UniProtKB/TrEMBL
  ENSMUST00000201556.4 UniProtKB/TrEMBL
  ENSMUST00000201739.2 UniProtKB/TrEMBL
  ENSMUST00000202237.4 UniProtKB/TrEMBL
  ENSMUST00000202250 ENTREZGENE
  ENSMUST00000202250.4 UniProtKB/Swiss-Prot
InterPro OCAD1/2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OCIA_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:68095 UniProtKB/Swiss-Prot
MGD MGI:1915345 ENTREZGENE
NCBI Gene 68095 ENTREZGENE
PANTHER OCIA DOMAIN-CONTAINING PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13336 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam OCIA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ociad1 PhenoGen
UniProt A0A0J9YTV6_MOUSE UniProtKB/TrEMBL
  A0A0J9YTV7_MOUSE UniProtKB/TrEMBL
  A0A0J9YUB6_MOUSE UniProtKB/TrEMBL
  A0A0J9YUK7_MOUSE UniProtKB/TrEMBL
  OCAD1_MOUSE UniProtKB/Swiss-Prot
  Q3TEC2 ENTREZGENE
  Q3TJS3 ENTREZGENE
  Q7TNB3 ENTREZGENE
  Q922M2 ENTREZGENE
  Q9CRD0 ENTREZGENE
UniProt Secondary Q3TEC2 UniProtKB/Swiss-Prot
  Q3TJS3 UniProtKB/Swiss-Prot
  Q7TNB3 UniProtKB/Swiss-Prot
  Q922M2 UniProtKB/Swiss-Prot