Slc25a25 (solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25) - Rat Genome Database

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Gene: Slc25a25 (solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25) Mus musculus
Analyze
Symbol: Slc25a25
Name: solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
RGD ID: 1550142
MGI Page MGI
Description: Predicted to enable ATP:phosphate antiporter activity. Acts upstream of or within several processes, including response to activity; response to dietary excess; and response to food. Located in mitochondrion. Is expressed in several structures, including alimentary system; eye; genitourinary system; hemolymphoid system gland; and nervous system. Orthologous to human SLC25A25 (solute carrier family 25 member 25).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1110030N17Rik; calcium-binding mitochondrial carrier protein SCaMC-2; MCSC; MGC36388; mitochondrial adenyl nucleotide antiporter SLC25A25; mitochondrial Ca2+-dependent solute carrier; mKIAA1896; RIKEN cDNA 1110030N17 gene; SCaMC-2; short calcium-binding mitochondrial carrier protein 2; small calcium-binding mitochondrial carrier protein 2; solute carrier family 25 member 25
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39232,304,499 - 32,341,482 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl232,304,499 - 32,341,457 (-)EnsemblGRCm39 Ensembl
GRCm38232,414,487 - 32,451,470 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl232,414,487 - 32,451,445 (-)EnsemblGRCm38mm10GRCm38
MGSCv37232,270,007 - 32,306,990 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36232,236,489 - 32,273,431 (-)NCBIMGSCv36mm8
Celera232,120,151 - 32,157,130 (-)NCBICelera
Cytogenetic Map2BNCBI
cM Map222.09NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,2-dichloroethane  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2',4,5'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3,3',5-triiodo-L-thyronine  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (EXP,ISO)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
acrolein  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
alpha-pinene  (ISO)
amiodarone  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (EXP)
benzo[a]pyrene diol epoxide I  (ISO)
beta-lapachone  (ISO)
bisphenol A  (ISO)
Brodifacoum  (ISO)
bromobenzene  (ISO)
cadmium dichloride  (ISO)
cadmium sulfate  (EXP)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chloroprene  (ISO)
chlorpyrifos  (EXP)
choline  (EXP)
ciguatoxin CTX1B  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
corn oil  (ISO)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
dioxygen  (EXP)
diquat  (EXP)
epoxiconazole  (EXP)
ethanol  (EXP)
fluoranthene  (EXP)
flutamide  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
furan  (ISO)
gentamycin  (ISO)
indole-3-methanol  (ISO)
inulin  (EXP)
L-methionine  (EXP)
leflunomide  (ISO)
Licochalcone B  (ISO)
mercury dichloride  (ISO)
methamphetamine  (ISO)
methimazole  (ISO)
methylmercury chloride  (ISO)
monosodium L-glutamate  (EXP)
nefazodone  (ISO)
nickel atom  (ISO)
nimesulide  (ISO)
ozone  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (EXP)
phenobarbital  (EXP)
phorone  (ISO)
pirinixic acid  (EXP)
progesterone  (ISO)
propiconazole  (ISO)
rac-lactic acid  (ISO)
sevoflurane  (ISO)
silicon dioxide  (EXP)
sodium arsenite  (ISO)
Soman  (ISO)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
tacrolimus hydrate  (ISO)
tamoxifen  (EXP)
teriflunomide  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
triadimefon  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
troglitazone  (EXP)
urethane  (ISO)
valdecoxib  (ISO)
valproic acid  (ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Feb 28;10(1):35-48.
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12819125   PMID:14681479   PMID:15054102   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:18614015   PMID:18799693   PMID:20562862   PMID:21267068   PMID:21296886   PMID:21677750   PMID:21873635   PMID:23344948   PMID:24194600   PMID:28588221   PMID:31138677   PMID:32581705  
PMID:38355793  


Genomics

Comparative Map Data
Slc25a25
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39232,304,499 - 32,341,482 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl232,304,499 - 32,341,457 (-)EnsemblGRCm39 Ensembl
GRCm38232,414,487 - 32,451,470 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl232,414,487 - 32,451,445 (-)EnsemblGRCm38mm10GRCm38
MGSCv37232,270,007 - 32,306,990 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36232,236,489 - 32,273,431 (-)NCBIMGSCv36mm8
Celera232,120,151 - 32,157,130 (-)NCBICelera
Cytogenetic Map2BNCBI
cM Map222.09NCBI
SLC25A25
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389128,068,232 - 128,109,245 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9128,068,201 - 128,109,245 (+)EnsemblGRCh38hg38GRCh38
GRCh379130,830,511 - 130,871,524 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369129,870,300 - 129,911,345 (+)NCBINCBI36Build 36hg18NCBI36
Build 349127,940,370 - 127,951,078NCBI
Celera9101,482,501 - 101,523,452 (+)NCBICelera
Cytogenetic Map9q34.11NCBI
HuRef9100,445,708 - 100,486,206 (+)NCBIHuRef
CHM1_19130,982,710 - 131,023,583 (+)NCBICHM1_1
T2T-CHM13v2.09140,276,208 - 140,317,210 (+)NCBIT2T-CHM13v2.0
Slc25a25
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8336,106,448 - 36,139,812 (-)NCBIGRCr8
mRatBN7.2315,708,702 - 15,742,195 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl315,708,703 - 15,742,216 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx318,777,546 - 18,787,673 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0327,362,543 - 27,372,674 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0325,613,291 - 25,623,413 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0311,442,396 - 11,476,186 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl311,442,397 - 11,452,529 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0316,791,266 - 16,825,049 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4311,539,415 - 11,549,538 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1311,435,787 - 11,445,910 (-)NCBI
Celera310,451,575 - 10,461,792 (-)NCBICelera
Cytogenetic Map3p11NCBI
Slc25a25
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955419618,979 - 656,189 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955419621,445 - 656,172 (-)NCBIChiLan1.0ChiLan1.0
SLC25A25
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21111,243,799 - 11,284,673 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1911,246,147 - 11,287,021 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0999,188,906 - 99,229,771 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19127,859,948 - 127,900,922 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9127,859,948 - 127,900,922 (+)Ensemblpanpan1.1panPan2
SLC25A25
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1955,358,348 - 55,394,624 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl955,360,043 - 55,394,519 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha954,553,071 - 54,588,912 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0956,285,169 - 56,316,835 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1955,040,512 - 55,076,587 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0955,355,242 - 55,391,319 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0955,446,944 - 55,482,811 (-)NCBIUU_Cfam_GSD_1.0
Slc25a25
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947195,892,611 - 195,927,737 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648715,661,079 - 15,696,406 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648715,661,133 - 15,696,267 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A25
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1268,531,752 - 268,576,994 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11268,531,752 - 268,575,195 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21302,558,673 - 302,565,658 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Sscrofa10.21302,453,222 - 302,453,476 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A25
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11210,017,775 - 10,059,013 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1210,017,755 - 10,035,476 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660796,165,921 - 6,208,553 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a25
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247607,515,764 - 7,550,810 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247607,516,910 - 7,550,897 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc25a25
773 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3910
Count of miRNA genes:728
Interacting mature miRNAs:929
Transcripts:ENSMUST00000028160, ENSMUST00000052119, ENSMUST00000113307, ENSMUST00000113308, ENSMUST00000113310, ENSMUST00000127961, ENSMUST00000128611, ENSMUST00000136361, ENSMUST00000143092, ENSMUST00000153782, ENSMUST00000153886
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552706Cia24_mcollagen induced arthritis QTL 24 (mouse)Not determined22467911533523172Mouse
8552707Cia23_mcollagen induced arthritis QTL 23 (mouse)Not determined21212953766556453Mouse
12904005Cfq2_mconditioned fear QTL 2 (mouse)22702264256396228Mouse
14746979Manh51_mmandible shape 51 (mouse)22896112962961129Mouse
1300624Insq7_minsulin QTL 7 (mouse)Not determined2938444643384575Mouse
8552705Cia25_mcollagen induced arthritis 25 (mouse)Not determined22467911533523172Mouse
39128209Lwq14_mliver weight QTL 14 (mouse)220897778118894840Mouse
1558738W6q1_mweight 6 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
4141236Hbnr5_mHeligmosomoides bakeri nematode resistance 5 (mouse)Not determined31214567105143570Mouse
26884438Sklq12_mskull length QTL 12, 16 week (mouse)22459001254890012Mouse
12904008Cfq6_mconditioned fear QTL 6 (mouse)23120303544508204Mouse
1301790Pcfm1_mperiosteal circumference and femur length 1 (mouse)Not determined2823629642236396Mouse
1302174Dssc2_mdextran sodium sulfate induced colitis QTL2 (mouse)Not determined224224632148700377Mouse
4142130Pgis2_mproteoglycan induced spondylitis 2 (mouse)Not determined22530805156971811Mouse
1301980Fcsa5_mfemoral cross-sectional area 5 (mouse)Not determined2767911541679261Mouse
1301376Etohc1_methanol consumption 1 (mouse)Not determined22112972555129871Mouse
1558915W3q1_mweight 3 weeks QTL 1 (mouse)Not determined220897778118894840Mouse
14746997Mancz2_mmandible centroid size 2 (mouse)22896112962961129Mouse
12792980Fbmd1_mfemoral bone mineral density 1, females only (mouse)22503449245034492Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1301641Sbmd2_mspinal bone mineral density 2 (mouse)Not determined21421456748214713Mouse
1357454Kidq1_mkidney weight QTL 1 (mouse)Not determined220897778118894840Mouse
10755513Amzn4_manatomical modifier of Zfp423 4 (mouse)2938444643384575Mouse
1558966W10q9_mweight 10 weeks QTL 9 (mouse)Not determined220897778118894840Mouse
4141854T2dm2sa_mtype 2 diabetes mellitus 2 in SMXA RI mice (mouse)Not determined229307947148374934Mouse
13463470Tubisq1_mtubulointerstitial injury severity, QTL 1 (mouse)22368914557689269Mouse
1558899Egq1_mearly growth QTL 1 (mouse)Not determined220897778118894840Mouse
1357681Hrtq1_mheart weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357436Splq1_mspleen weight QTL 1 (mouse)Not determined220897778118894840Mouse
1357881Estoq1_membryo survival total QTL 1 (mouse)Not determined220897778118894840Mouse
1300577Capsq1_mcapsaicin sensitivity related QTL 1 (mouse)Not determined22760206084013384Mouse
4141708Pbwg1.2_mpostnatal body weight growth 1.2 (mouse)Not determined2112972555129871Mouse
10043876Adip22_madiposity 22 (mouse)Not determined2830805142308240Mouse

Markers in Region
Slc25a25  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map2BUniSTS
cM Map222.09UniSTS


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001164357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001164358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001290558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_146118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006497955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK003995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL928710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB653459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC022114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC066998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM947090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY772900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO043296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV784232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000028160   ⟹   ENSMUSP00000028160
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,304,499 - 32,341,434 (-)Ensembl
GRCm38.p6 Ensembl232,414,487 - 32,451,422 (-)Ensembl
Ensembl Acc Id: ENSMUST00000052119   ⟹   ENSMUSP00000060581
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,304,499 - 32,321,131 (-)Ensembl
GRCm38.p6 Ensembl232,414,487 - 32,431,119 (-)Ensembl
Ensembl Acc Id: ENSMUST00000113307   ⟹   ENSMUSP00000108932
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,305,072 - 32,314,017 (-)Ensembl
GRCm38.p6 Ensembl232,415,060 - 32,424,005 (-)Ensembl
Ensembl Acc Id: ENSMUST00000113308   ⟹   ENSMUSP00000108933
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,304,982 - 32,320,764 (-)Ensembl
GRCm38.p6 Ensembl232,414,970 - 32,430,752 (-)Ensembl
Ensembl Acc Id: ENSMUST00000113310   ⟹   ENSMUSP00000108936
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,304,502 - 32,341,457 (-)Ensembl
GRCm38.p6 Ensembl232,414,490 - 32,451,445 (-)Ensembl
Ensembl Acc Id: ENSMUST00000127961   ⟹   ENSMUSP00000121932
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,309,142 - 32,321,116 (-)Ensembl
GRCm38.p6 Ensembl232,419,130 - 32,431,104 (-)Ensembl
Ensembl Acc Id: ENSMUST00000128611
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,307,104 - 32,310,462 (-)Ensembl
GRCm38.p6 Ensembl232,417,092 - 32,420,450 (-)Ensembl
Ensembl Acc Id: ENSMUST00000136361   ⟹   ENSMUSP00000115617
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,307,430 - 32,321,117 (-)Ensembl
GRCm38.p6 Ensembl232,417,418 - 32,431,105 (-)Ensembl
Ensembl Acc Id: ENSMUST00000143092
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,307,184 - 32,307,842 (-)Ensembl
GRCm38.p6 Ensembl232,417,172 - 32,417,830 (-)Ensembl
Ensembl Acc Id: ENSMUST00000153782
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,306,221 - 32,306,583 (-)Ensembl
GRCm38.p6 Ensembl232,416,209 - 32,416,571 (-)Ensembl
Ensembl Acc Id: ENSMUST00000153886   ⟹   ENSMUSP00000141486
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,309,060 - 32,311,992 (-)Ensembl
GRCm38.p6 Ensembl232,419,048 - 32,421,980 (-)Ensembl
Ensembl Acc Id: ENSMUST00000194756
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl232,317,361 - 32,321,181 (-)Ensembl
GRCm38.p6 Ensembl232,427,349 - 32,431,169 (-)Ensembl
RefSeq Acc Id: NM_001164357   ⟹   NP_001157829
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,304,499 - 32,341,482 (-)NCBI
GRCm38232,414,487 - 32,451,470 (-)ENTREZGENE
MGSCv37232,270,007 - 32,306,990 (-)RGD
Celera232,120,151 - 32,157,130 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001164358   ⟹   NP_001157830
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,304,499 - 32,321,163 (-)NCBI
GRCm38232,414,487 - 32,431,151 (-)NCBI
MGSCv37232,270,007 - 32,306,990 (-)RGD
Celera232,120,151 - 32,157,130 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001290558   ⟹   NP_001277487
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,304,499 - 32,314,078 (-)NCBI
GRCm38232,414,487 - 32,424,066 (-)NCBI
Celera232,120,151 - 32,157,130 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362905   ⟹   NP_001349834
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,304,499 - 32,321,163 (-)NCBI
GRCm38232,414,487 - 32,431,151 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362906   ⟹   NP_001349835
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,304,499 - 32,321,163 (-)NCBI
GRCm38232,414,487 - 32,431,151 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362907   ⟹   NP_001349836
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,304,499 - 32,321,163 (-)NCBI
GRCm38232,414,487 - 32,431,151 (-)NCBI
Sequence:
RefSeq Acc Id: NM_146118   ⟹   NP_666230
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,304,499 - 32,341,482 (-)NCBI
GRCm38232,414,487 - 32,451,470 (-)ENTREZGENE
MGSCv37232,270,007 - 32,306,990 (-)RGD
Celera232,120,151 - 32,157,130 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006497955   ⟹   XP_006498018
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39232,304,499 - 32,319,792 (-)NCBI
GRCm38232,414,487 - 32,425,948 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001157829 (Get FASTA)   NCBI Sequence Viewer  
  NP_001157830 (Get FASTA)   NCBI Sequence Viewer  
  NP_001277487 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349834 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349835 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349836 (Get FASTA)   NCBI Sequence Viewer  
  NP_666230 (Get FASTA)   NCBI Sequence Viewer  
  XP_006498018 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein A2ASZ8 (Get FASTA)   NCBI Sequence Viewer  
  AAH04720 (Get FASTA)   NCBI Sequence Viewer  
  AAH19978 (Get FASTA)   NCBI Sequence Viewer  
  AAH22114 (Get FASTA)   NCBI Sequence Viewer  
  AAH37109 (Get FASTA)   NCBI Sequence Viewer  
  AAH66998 (Get FASTA)   NCBI Sequence Viewer  
  BAC33730 (Get FASTA)   NCBI Sequence Viewer  
  BAC38604 (Get FASTA)   NCBI Sequence Viewer  
  BAC65850 (Get FASTA)   NCBI Sequence Viewer  
  BAE21031 (Get FASTA)   NCBI Sequence Viewer  
  EDL08548 (Get FASTA)   NCBI Sequence Viewer  
  EDL08549 (Get FASTA)   NCBI Sequence Viewer  
  EDL08550 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000028160
  ENSMUSP00000028160.9
  ENSMUSP00000060581
  ENSMUSP00000060581.8
  ENSMUSP00000108932
  ENSMUSP00000108932.3
  ENSMUSP00000108933
  ENSMUSP00000108933.2
  ENSMUSP00000108936
  ENSMUSP00000108936.3
  ENSMUSP00000115617.2
  ENSMUSP00000121932.2
  ENSMUSP00000141486.2
RefSeq Acc Id: NP_666230   ⟸   NM_146118
- Peptide Label: isoform 1
- UniProtKB: A2ASZ8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001157829   ⟸   NM_001164357
- Peptide Label: isoform 2
- UniProtKB: A2ASZ8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001157830   ⟸   NM_001164358
- Peptide Label: isoform 3
- UniProtKB: A2ASZ8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006498018   ⟸   XM_006497955
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001277487   ⟸   NM_001290558
- Peptide Label: isoform 4
- UniProtKB: Q99KD3 (UniProtKB/Swiss-Prot),   Q8VBT4 (UniProtKB/Swiss-Prot),   Q8JZT8 (UniProtKB/Swiss-Prot),   Q8BHG0 (UniProtKB/Swiss-Prot),   Q80T78 (UniProtKB/Swiss-Prot),   Q6NXM8 (UniProtKB/Swiss-Prot),   A2ASZ9 (UniProtKB/Swiss-Prot),   A2ASZ8 (UniProtKB/Swiss-Prot),   A2ASZ5 (UniProtKB/Swiss-Prot),   A2ASZ1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001349836   ⟸   NM_001362907
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001349835   ⟸   NM_001362906
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001349834   ⟸   NM_001362905
- Peptide Label: isoform 5
Ensembl Acc Id: ENSMUSP00000060581   ⟸   ENSMUST00000052119
Ensembl Acc Id: ENSMUSP00000108933   ⟸   ENSMUST00000113308
Ensembl Acc Id: ENSMUSP00000108932   ⟸   ENSMUST00000113307
Ensembl Acc Id: ENSMUSP00000108936   ⟸   ENSMUST00000113310
Ensembl Acc Id: ENSMUSP00000121932   ⟸   ENSMUST00000127961
Ensembl Acc Id: ENSMUSP00000028160   ⟸   ENSMUST00000028160
Ensembl Acc Id: ENSMUSP00000141486   ⟸   ENSMUST00000153886
Ensembl Acc Id: ENSMUSP00000115617   ⟸   ENSMUST00000136361
Protein Domains
EF-hand

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A2ASZ8-F1-model_v2 AlphaFold A2ASZ8 1-469 view protein structure

Promoters
RGD ID:6847689
Promoter ID:MM_ACW:28003
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:HASERARA.ASEP07,   HASERARA.BSEP07-UNSPLICED,   SLC25A25.NSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,269,911 - 32,270,411 (+)MPROMDB
RGD ID:6832742
Promoter ID:MM_KWN:28711
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000028400
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,271,606 - 32,272,757 (-)MPROMDB
RGD ID:6832740
Promoter ID:MM_KWN:28712
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000028399
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,272,881 - 32,274,307 (-)MPROMDB
RGD ID:6832739
Promoter ID:MM_KWN:28713
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000028401
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,275,801 - 32,276,307 (-)MPROMDB
RGD ID:6832741
Promoter ID:MM_KWN:28714
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day4,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000028398
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,277,056 - 32,278,207 (-)MPROMDB
RGD ID:6831834
Promoter ID:MM_KWN:28715
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:UC008JFN.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,279,406 - 32,280,307 (-)MPROMDB
RGD ID:6832738
Promoter ID:MM_KWN:28716
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000113305,   ENSMUST00000113308,   OTTMUST00000028392,   OTTMUST00000028396,   OTTMUST00000028397
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,286,474 - 32,286,974 (-)MPROMDB
RGD ID:6832743
Promoter ID:MM_KWN:28718
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung,   Spleen
Transcripts:OTTMUST00000028394,   UC008JFQ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36232,306,639 - 32,307,139 (-)MPROMDB
RGD ID:6877004
Promoter ID:EPDNEW_M1953
Type:initiation region
Name:Slc25a25_2
Description:Mus musculus solute carrier family 25 (mitochondrial carrier,phosphate carrier), member 25 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M1955  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38232,431,126 - 32,431,186EPDNEW
RGD ID:6877008
Promoter ID:EPDNEW_M1955
Type:initiation region
Name:Slc25a25_1
Description:Mus musculus solute carrier family 25 (mitochondrial carrier,phosphate carrier), member 25 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M1953  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38232,451,425 - 32,451,485EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915913 AgrOrtholog
Ensembl Genes ENSMUSG00000026819 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000028160 ENTREZGENE
  ENSMUST00000028160.15 UniProtKB/Swiss-Prot
  ENSMUST00000052119 ENTREZGENE
  ENSMUST00000052119.14 UniProtKB/Swiss-Prot
  ENSMUST00000113307 ENTREZGENE
  ENSMUST00000113307.9 UniProtKB/Swiss-Prot
  ENSMUST00000113308 ENTREZGENE
  ENSMUST00000113308.8 UniProtKB/Swiss-Prot
  ENSMUST00000113310 ENTREZGENE
  ENSMUST00000113310.9 UniProtKB/Swiss-Prot
  ENSMUST00000127961.3 UniProtKB/TrEMBL
  ENSMUST00000136361.8 UniProtKB/TrEMBL
  ENSMUST00000153886.7 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF-hand UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Graves_DC UniProtKB/Swiss-Prot
  Mit_carrier UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mitochondrial_sb/sol_carrier UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:227731 UniProtKB/Swiss-Prot
MGD MGI:1915913 ENTREZGENE
NCBI Gene Slc25a25 ENTREZGENE
PANTHER CALCIUM-BINDING MITOCHONDRIAL CARRIER PROTEIN SCAMC-2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOLUTE CARRIER FAMILY 25 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam EF-hand_7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF-hand_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mito_carr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slc25a25 PhenoGen
PRINTS GRAVESDC UniProtKB/Swiss-Prot
  MITOCARRIER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE EF_HAND_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOLCAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART EFh UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF47473 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0A6YWC1_MOUSE UniProtKB/TrEMBL
  A2ASZ1 ENTREZGENE
  A2ASZ5 ENTREZGENE
  A2ASZ8 ENTREZGENE
  A2ASZ9 ENTREZGENE
  F6RC04_MOUSE UniProtKB/TrEMBL
  Q6NXM8 ENTREZGENE
  Q80T78 ENTREZGENE
  Q8BHG0 ENTREZGENE
  Q8JZT8 ENTREZGENE
  Q8VBT4 ENTREZGENE
  Q99KD3 ENTREZGENE
  SCMC2_MOUSE UniProtKB/Swiss-Prot
  Z4YLR9_MOUSE UniProtKB/TrEMBL
UniProt Secondary A2ASZ1 UniProtKB/Swiss-Prot
  A2ASZ5 UniProtKB/Swiss-Prot
  A2ASZ9 UniProtKB/Swiss-Prot
  Q6NXM8 UniProtKB/Swiss-Prot
  Q80T78 UniProtKB/Swiss-Prot
  Q8BHG0 UniProtKB/Swiss-Prot
  Q8JZT8 UniProtKB/Swiss-Prot
  Q8VBT4 UniProtKB/Swiss-Prot
  Q99KD3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-21 Slc25a25  solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25  1110030N17Rik  RIKEN cDNA 1110030N17 gene  Symbol and/or name change 5135510 APPROVED
2024-08-21 1110030N17Rik  RIKEN cDNA 1110030N17 gene  Slc25a25  solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25  Symbol and/or name change 5135510 APPROVED