Serpinb9 (serpin family B member 9) - Rat Genome Database

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Gene: Serpinb9 (serpin family B member 9) Rattus norvegicus
Analyze
Symbol: Serpinb9
Name: serpin family B member 9
RGD ID: 1549730
Description: Predicted to enable cysteine-type endopeptidase inhibitor activity involved in apoptotic process; protease binding activity; and serine-type endopeptidase inhibitor activity. Predicted to be involved in several processes, including cellular response to estrogen stimulus; negative regulation of endopeptidase activity; and protection from natural killer cell mediated cytotoxicity. Predicted to act upstream of or within several processes, including T cell mediated cytotoxicity; acute inflammatory response to antigenic stimulus; and negative regulation of T cell apoptotic process. Predicted to be located in Golgi apparatus; cytosol; and nucleoplasm. Predicted to be active in cytoplasm and extracellular space. Orthologous to human SERPINB9 (serpin family B member 9); PARTICIPATES IN Entamoebiasis pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: MGC94010; serine (or cysteine) peptidase inhibitor, clade B, member 9; serpin B9; serpin peptidase inhibitor, clade B (ovalbumin), member 9; similar to SPI6
RGD Orthologs
Human
Mouse
Bonobo
Dog
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81731,628,887 - 31,652,003 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1731,629,392 - 31,651,974 (-)EnsemblGRCr8
mRatBN7.21731,420,118 - 31,443,237 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1731,420,125 - 31,443,230 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1731,255,927 - 31,267,358 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01732,859,687 - 32,871,118 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01731,251,684 - 31,263,115 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01732,648,846 - 32,673,047 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1732,650,441 - 32,661,865 (-)Ensemblrn6Rnor6.0
Rnor_5.01734,541,052 - 34,565,258 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41737,780,179 - 37,791,625 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1730,982,972 - 30,994,418 (-)NCBICelera
Cytogenetic Map17p12NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1-naphthyl isothiocyanate  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3-chloropropane-1,2-diol  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxynon-2-enal  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
9-cis-retinoic acid  (ISO)
acetamide  (EXP)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
all-trans-4-oxoretinoic acid  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
antirheumatic drug  (ISO)
belinostat  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
buspirone  (EXP)
cadmium dichloride  (EXP)
calcitriol  (ISO)
carbon nanotube  (ISO)
chlordecone  (ISO)
chromium(6+)  (ISO)
cobalt dichloride  (EXP,ISO)
copper(II) sulfate  (ISO)
cycloheximide  (ISO)
cyclosporin A  (ISO)
cytarabine  (ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
endosulfan  (EXP,ISO)
entinostat  (ISO)
ethanol  (ISO)
fipronil  (EXP)
fulvestrant  (ISO)
genistein  (EXP)
gentamycin  (EXP)
glafenine  (EXP)
hydroquinone  (ISO)
hypochlorous acid  (ISO)
isotretinoin  (ISO)
ivermectin  (ISO)
lipopolysaccharide  (ISO)
mercury dibromide  (ISO)
methamphetamine  (EXP)
methapyrilene  (EXP)
methimazole  (EXP)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
Moxestrol  (ISO)
N-nitrosodimethylamine  (EXP)
nefazodone  (EXP)
nickel atom  (ISO)
nickel sulfate  (ISO)
okadaic acid  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
p-chloromercuribenzoic acid  (ISO)
p-menthan-3-ol  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenylmercury acetate  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
progesterone  (ISO)
quercetin  (ISO)
raloxifene  (ISO)
resorcinol  (ISO)
rifampicin  (ISO)
rotenone  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
SCH 23390  (EXP)
silicon dioxide  (EXP,ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
Soman  (EXP)
succimer  (ISO)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
T-2 toxin  (ISO)
tacrolimus hydrate  (ISO)
tamoxifen  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
topotecan  (EXP)
trichloroethene  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
triphenyl phosphate  (ISO)
triptonide  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vancomycin  (ISO)
vinclozolin  (EXP)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IEA,ISO)
cytosol  (ISO)
extracellular region  (IEA)
extracellular space  (IBA,IEA,ISO)
Golgi apparatus  (ISO)
nucleoplasm  (ISO)
nucleus  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Comprehensive gene review and curation RGD comprehensive gene curation
6. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:8910377   PMID:10790428   PMID:11463822   PMID:11485349   PMID:15454490   PMID:15739160   PMID:16267761   PMID:16306080   PMID:16618603   PMID:17237823   PMID:17479112   PMID:17878334  
PMID:19946888   PMID:20458337   PMID:21795594   PMID:22090449   PMID:23533145  


Genomics

Comparative Map Data
Serpinb9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81731,628,887 - 31,652,003 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1731,629,392 - 31,651,974 (-)EnsemblGRCr8
mRatBN7.21731,420,118 - 31,443,237 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1731,420,125 - 31,443,230 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1731,255,927 - 31,267,358 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01732,859,687 - 32,871,118 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01731,251,684 - 31,263,115 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01732,648,846 - 32,673,047 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1732,650,441 - 32,661,865 (-)Ensemblrn6Rnor6.0
Rnor_5.01734,541,052 - 34,565,258 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41737,780,179 - 37,791,625 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1730,982,972 - 30,994,418 (-)NCBICelera
Cytogenetic Map17p12NCBI
SERPINB9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3862,887,270 - 2,903,309 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl62,887,173 - 2,903,309 (-)Ensemblhg38GRCh38
GRCh3762,887,504 - 2,903,543 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3662,832,503 - 2,848,506 (-)NCBIBuild 36Build 36hg18NCBI36
Build 3462,832,504 - 2,848,506NCBI
Celera64,116,448 - 4,132,549 (-)NCBICelera
Cytogenetic Map6p25.2NCBI
HuRef62,760,622 - 2,776,671 (-)NCBIHuRef
CHM1_162,889,873 - 2,905,917 (-)NCBICHM1_1
T2T-CHM13v2.062,753,393 - 2,769,547 (-)NCBIT2T-CHM13v2.0
Serpinb9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391333,181,044 - 33,201,938 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1333,187,233 - 33,201,940 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381332,997,061 - 33,017,955 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1333,003,250 - 33,017,957 (+)Ensemblmm10GRCm38
MGSCv371333,096,410 - 33,109,824 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361333,012,078 - 33,024,345 (+)NCBIMGSCv36mm8
Celera1333,206,042 - 33,219,456 (+)NCBICelera
Cytogenetic Map13A3.2- A3.3NCBI
cM Map1313.79NCBI
SERPINB9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2517,513,350 - 17,528,231 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1613,505,441 - 13,522,068 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v062,709,188 - 2,725,592 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.162,812,815 - 2,827,991 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl62,812,815 - 2,827,932 (-)EnsemblpanPan2panpan1.1
SERPINB9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1353,186,209 - 3,200,894 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl353,190,543 - 3,199,690 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha353,193,426 - 3,208,344 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0353,241,311 - 3,256,956 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl353,241,318 - 3,256,861 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1353,117,105 - 3,131,897 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0353,140,027 - 3,155,645 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0354,472,126 - 4,487,763 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
SERPINB9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl71,721,383 - 1,735,074 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.171,723,302 - 1,732,562 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.271,843,801 - 1,845,589 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SERPINB9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11769,258,377 - 69,272,954 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1769,259,258 - 69,272,501 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660442,827,755 - 2,841,889 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Serpinb9
103 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:58
Count of miRNA genes:52
Interacting mature miRNAs:57
Transcripts:ENSRNOT00000022194
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
2300002Iddm36Insulin dependent diabetes mellitus QTL 361.98blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)17999128640540197Rat
1354640Scl32Serum cholesterol level QTL 325.4blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)171578159260781592Rat
152023626Bp403Blood pressure QTL 4033.86arterial blood pressure trait (VT:2000000)172393042179524188Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17211514934551001Rat
9590107Sffal7Serum free fatty acids level QTL 74.810.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)172840914773409147Rat
2302377Scl61Serum cholesterol level QTL 614.36blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)172738994653481766Rat
70157Niddm32Non-insulin dependent diabetes mellitus QTL 324.34blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)172245492450909196Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
1354628Stl13Serum triglyceride level QTL 133.8blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)172129303960781592Rat
1581512Cm55Cardiac mass QTL 552.80.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172702794956836890Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131701463Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17452803849528038Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17429913069599340Rat
61394Bp8Blood pressure QTL 82.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)172308056759555013Rat
1559055Bp278Blood pressure QTL 2780.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318468653184Rat
10450503Bp386Blood pressure QTL 3860.28arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)173136839162109574Rat
152025238Slep14Serum leptin concentration QTL 144.62blood leptin amount (VT:0005667)172418489079524188Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)17429913069599340Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17429913035837242Rat
1331765Hrtrt15Heart rate QTL 154.094heart pumping trait (VT:2000009)heart rate (CMO:0000002)171533061355836425Rat
8552928Pigfal9Plasma insulin-like growth factor 1 level QTL 99blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)172840914773409147Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17452803849528038Rat
12903980Cm120Cardiac mass QTL 1200.002heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)172365318468653184Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17131990913Rat
12903981Am17Aortic mass QTL 170.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)172365318468653184Rat
4889891Eae32Experimental allergic encephalomyelitis QTL 324.80.0002nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)172702794936146731Rat
4889955Bss93Bone structure and strength QTL 934.4tibia size trait (VT:0100001)tibia cortical bone volume to tibia total bone volume ratio (CMO:0001727)172702794960463643Rat
2303561Bw91Body weight QTL 912body mass (VT:0001259)body weight (CMO:0000012)17886846253868462Rat
12903982Kidm70Kidney mass QTL 700.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)172365318470974005Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17137830672Rat
12903978Cm118Cardiac mass QTL 1180.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)172365318468653184Rat
2324621Coatc5Coat color QTL 5coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)173136839173951021Rat
12903979Cm119Cardiac mass QTL 1190.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172365318468653184Rat
1354619Bp242Blood pressure QTL 2426.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)172459934069599340Rat
1354596Bw32Body weight QTL 324.5body mass (VT:0001259)body weight (CMO:0000012)17429913060781592Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
152023740Bp406Blood pressure QTL 4066.06arterial blood pressure trait (VT:2000000)172393042179524188Rat
7488966Bp370Blood pressure QTL 3700.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318457246843Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17160781592Rat
152023737Bp405Blood pressure QTL 4055.06arterial blood pressure trait (VT:2000000)2393042179524188Rat
1354659Scl68Serum cholesterol level QTL 683.9blood VLDL cholesterol amount (VT:0005144)blood very low density lipoprotein cholesterol level (CMO:0000648)171578159260781592Rat
152023736Bp404Blood pressure QTL 4043.78arterial blood pressure trait (VT:2000000)172393042179524188Rat

Markers in Region
RH127494  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21731,420,237 - 31,420,441 (+)MAPPERmRatBN7.2
Rnor_6.01732,650,049 - 32,650,252NCBIRnor6.0
Rnor_5.01734,542,255 - 34,542,458UniSTSRnor5.0
RGSC_v3.41737,779,809 - 37,780,012UniSTSRGSC3.4
Celera1730,982,602 - 30,982,805UniSTS
Cytogenetic Map17p12UniSTS
BI276174  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21731,420,705 - 31,420,910 (+)MAPPERmRatBN7.2
Rnor_6.01732,650,517 - 32,650,721NCBIRnor6.0
Rnor_5.01734,542,723 - 34,542,927UniSTSRnor5.0
RGSC_v3.41737,780,277 - 37,780,481UniSTSRGSC3.4
Celera1730,983,070 - 30,983,274UniSTS
RH 3.4 Map17371.3UniSTS
Cytogenetic Map17p12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000022194   ⟹   ENSRNOP00000022194
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1731,629,392 - 31,640,816 (-)Ensembl
mRatBN7.2 Ensembl1731,420,642 - 31,430,748 (-)Ensembl
Rnor_6.0 Ensembl1732,650,441 - 32,661,865 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000108932   ⟹   ENSRNOP00000090783
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1731,629,884 - 31,640,816 (-)Ensembl
mRatBN7.2 Ensembl1731,420,125 - 31,431,956 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000111970   ⟹   ENSRNOP00000083868
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1731,629,392 - 31,651,974 (-)Ensembl
mRatBN7.2 Ensembl1731,420,125 - 31,443,230 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000115382   ⟹   ENSRNOP00000092603
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1731,420,125 - 31,431,609 (-)Ensembl
RefSeq Acc Id: NM_001007732   ⟹   NP_001007733
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81731,629,370 - 31,640,816 (-)NCBI
mRatBN7.21731,420,608 - 31,432,054 (-)NCBI
Rnor_6.01732,650,419 - 32,661,865 (-)NCBI
Rnor_5.01734,541,052 - 34,565,258 (-)NCBI
RGSC_v3.41737,780,179 - 37,791,625 (-)RGD
Celera1730,982,972 - 30,994,418 (-)RGD
Sequence:
RefSeq Acc Id: XM_006253872   ⟹   XP_006253934
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81731,628,887 - 31,652,003 (-)NCBI
mRatBN7.21731,420,118 - 31,443,237 (-)NCBI
Rnor_6.01732,648,846 - 32,673,047 (-)NCBI
Rnor_5.01734,541,052 - 34,565,258 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001007733   ⟸   NM_001007732
- UniProtKB: Q6AYF8 (UniProtKB/TrEMBL),   A0A8I6AGW0 (UniProtKB/TrEMBL),   F7EWV0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006253934   ⟸   XM_006253872
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A0T8 (UniProtKB/TrEMBL),   F7EWV0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000022194   ⟸   ENSRNOT00000022194
Ensembl Acc Id: ENSRNOP00000083868   ⟸   ENSRNOT00000111970
Ensembl Acc Id: ENSRNOP00000090783   ⟸   ENSRNOT00000108932
Ensembl Acc Id: ENSRNOP00000092603   ⟸   ENSRNOT00000115382
Protein Domains
SERPIN

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6AYF8-F1-model_v2 AlphaFold Q6AYF8 1-374 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700418
Promoter ID:EPDNEW_R10942
Type:initiation region
Name:Serpinb9_1
Description:serpin family B member 9
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01732,661,767 - 32,661,827EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1549730 AgrOrtholog
BioCyc Gene G2FUF-9582 BioCyc
Ensembl Genes ENSRNOG00000033772 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000022194 ENTREZGENE
  ENSRNOT00000022194.8 UniProtKB/TrEMBL
  ENSRNOT00000108932.1 UniProtKB/TrEMBL
  ENSRNOT00000111970 ENTREZGENE
  ENSRNOT00000111970.1 UniProtKB/TrEMBL
  ENSRNOT00000115382.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.39.10 UniProtKB/TrEMBL
  3.30.497.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7121006 IMAGE-MGC_LOAD
InterPro Protease_inhib_I4_serpin UniProtKB/TrEMBL
  Protease_inhib_I4_serpin_CS UniProtKB/TrEMBL
  Sepin_dom UniProtKB/TrEMBL
  Serpin_B9/Maspin UniProtKB/TrEMBL
  Serpin_sf UniProtKB/TrEMBL
  Serpin_sf_1 UniProtKB/TrEMBL
  Serpin_sf_2 UniProtKB/TrEMBL
KEGG Report rno:361241 UniProtKB/TrEMBL
MGC_CLONE MGC:94010 IMAGE-MGC_LOAD
NCBI Gene 361241 ENTREZGENE
PANTHER Prot_inh_serpin UniProtKB/TrEMBL
  SERPIN B9 UniProtKB/TrEMBL
Pfam Serpin UniProtKB/TrEMBL
PhenoGen Serpinb9 PhenoGen
PRINTS MASPIN UniProtKB/TrEMBL
PROSITE SERPIN UniProtKB/TrEMBL
RatGTEx ENSRNOG00000033772 RatGTEx
SMART SERPIN UniProtKB/TrEMBL
Superfamily-SCOP Prot_inh_serpin UniProtKB/TrEMBL
UniProt A0A8I6A0T8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AAC0_RAT UniProtKB/TrEMBL
  A0A8I6AGW0 ENTREZGENE, UniProtKB/TrEMBL
  F7EWV0 ENTREZGENE, UniProtKB/TrEMBL
  Q6AYF8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-13 Serpinb9  serpin family B member 9  Serpinb9  serpin peptidase inhibitor, clade B (ovalbumin), member 9  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-06 Serpinb9  serine (or cysteine) peptidase inhibitor, clade B, member 9  MGC94010  similar to SPI6  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-09-15 MGC94010  similar to SPI6      Symbol and Name status set to provisional 70820 PROVISIONAL