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Gene: RAD54L (RAD54 like) Sus scrofa

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Symbol:

RAD54L

Name:

RAD54 like

RGD ID:

14290916

Description:

ENCODES a protein that exhibits ATP binding (inferred); ATP-dependent DNA/DNA annealing activity (inferred); helicase activity (inferred); INVOLVED IN chromosome organization (ortholog); determination of adult lifespan (ortholog); DNA damage response (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast ductal carcinoma (ortholog); FOUND IN nucleoplasm (inferred); protein-containing complex (inferred); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

DNA repair and recombination protein RAD54-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RAD54L (RAD54 like)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Rad54l (RAD54 like (S. cerevisiae))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Rad54l (RAD54 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rad54l (RAD54 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RAD54L (RAD54 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RAD54L (RAD54 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rad54l (RAD54 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RAD54L (RAD54 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rad54l (RAD54 like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	165,152,978 - 165,184,776 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	165,156,833 - 165,184,641 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	152,636,270 - 152,664,106 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

breast cancer (ISO)

Breast Cancer, Familial (ISO)

breast ductal carcinoma (ISO)

Breast Neoplasms (ISO)

colon adenocarcinoma (ISO)

disease of cellular proliferation (ISO)

genetic disease (ISO)

hepatocellular carcinoma (ISO)

hereditary breast ovarian cancer syndrome (ISO)

IDH-mutant anaplastic astrocytoma (ISO)

invasive ductal carcinoma (ISO)

non-Hodgkin lymphoma (ISO)

pancreatic cancer (ISO)

primary ovarian insufficiency (ISO)

sclerocornea (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromosome organization (IEA,ISO)

determination of adult lifespan (IEA,ISO)

DNA damage response (IEA,ISO)

double-strand break repair (IEA,ISO)

double-strand break repair via homologous recombination (IEA,ISO)

double-strand break repair via synthesis-dependent strand annealing (IBA)

reciprocal meiotic recombination (IBA)

response to ionizing radiation (IEA,ISO)

response to xenobiotic stimulus (IEA,ISO)

Cellular Component

nucleoplasm (IEA)

nucleus (IBA)

protein-containing complex (IEA)

Molecular Function

ATP binding (IEA)

ATP-dependent DNA/DNA annealing activity (IEA)

DNA translocase activity (IBA)

helicase activity (IEA)

hydrolase activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

RAD54L
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	165,152,978 - 165,184,776 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	165,156,833 - 165,184,641 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	152,636,270 - 152,664,106 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RAD54L
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	46,247,688 - 46,278,473 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	46,246,461 - 46,278,480 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	46,713,360 - 46,744,145 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	46,486,004 - 46,516,732 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	46,425,436 - 46,456,165	NCBI
Celera	1	45,000,746 - 45,031,525 (+)	NCBI		Celera
Cytogenetic Map	1	p34.1	NCBI
HuRef	1	44,829,132 - 44,859,988 (+)	NCBI		HuRef
CHM1_1	1	46,830,372 - 46,861,163 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	46,124,906 - 46,155,694 (+)	NCBI		T2T-CHM13v2.0

Rad54l
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	115,951,458 - 115,980,875 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	115,951,461 - 115,980,887 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	116,094,261 - 116,123,700 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	116,094,264 - 116,123,690 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	115,769,560 - 115,796,295 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	115,594,907 - 115,621,591 (-)	NCBI		MGSCv36	mm8
Celera	4	114,835,105 - 114,861,841 (-)	NCBI		Celera
Cytogenetic Map	4	D1	NCBI
cM Map	4	53.1	NCBI

Rad54l
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	134,812,158 - 134,841,821 (-)	NCBI		GRCr8
mRatBN7.2	5	129,575,431 - 129,605,100 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	129,575,378 - 129,605,070 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	132,191,515 - 132,221,172 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	133,946,399 - 133,975,757 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	133,968,540 - 133,998,199 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	134,948,511 - 134,978,125 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	134,948,512 - 134,978,125 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	138,732,242 - 138,762,035 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.1	5	136,209,780 - 136,239,533 (+)	NCBI
Celera	5	128,105,213 - 128,134,839 (-)	NCBI		Celera
Cytogenetic Map	5	q35	NCBI

Rad54l
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955464	11,996,512 - 12,033,490 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955464	11,996,512 - 12,033,525 (-)	NCBI	ChiLan1.0	ChiLan1.0

RAD54L
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	180,529,512 - 180,575,654 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	179,671,110 - 179,717,249 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	45,549,586 - 45,581,711 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	46,905,598 - 46,936,532 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	46,905,598 - 46,936,259 (+)	Ensembl	panpan1.1		panPan2

RAD54L
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	14,111,168 - 14,139,819 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	14,111,157 - 14,139,301 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	14,234,015 - 14,262,340 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	14,264,072 - 14,292,635 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	14,264,092 - 14,292,579 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	14,065,329 - 14,093,894 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	14,133,819 - 14,162,383 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	14,203,309 - 14,231,866 (-)	NCBI		UU_Cfam_GSD_1.0

Rad54l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	61,455,182 - 61,491,646 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	27,280,573 - 27,316,428 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	27,276,570 - 27,316,427 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RAD54L
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	86,510,616 - 86,542,426 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	86,507,248 - 86,542,663 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	30,444,520 - 30,476,524 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rad54l
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624906	2,165,780 - 2,193,764 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624906	2,164,711 - 2,194,262 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RAD54L
1172 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001123183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB355634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AEMK02000049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU694667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01095292	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000004320 ⟹ ENSSSCP00000004220

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	165,152,978 - 165,184,776 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000059309 ⟹ ENSSSCP00000034469

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	165,152,978 - 165,184,776 (-)	Ensembl

RefSeq Acc Id:

NM_001123183 ⟹ NP_001116655

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	165,156,833 - 165,184,641 (-)	NCBI

Sequence:

show sequence

CCGGGAATCCCGTTGTCCGGACTCGCCGTTCCCAGGCCTCGGATTCCGGCTCCCCCAGCCTCTC
TTCTGGCCTGTTATTACCCCGCCCCCCGCAACTGTCCCCTGCCTTCACATCCCCCGGGGACCTT
TATCCTGACTCCGCCCTGTGCTCCATCTGTGTCTTCCCCCCATCCCAGACCTCTACTCGTTTCT
GTTTGGATACTTCCTTCTTGGCCTGCTCTCCCGCCTTGGCTAACTGGCGGCCGACCCTCTCAGA
GTTTGGGCTCAGACCTCAGCCCCTGGCTGGATTCCCTCCGTCCGTGCTTCCTCTTTGAGAGCCC
ATGCTCTCAGTTATGTAGCGGCCCTCCTTTTACCAGGCTGGTTCTGCGTCCTCAGCTGCTGGGT
GCCTTTGACCTTTGGCTAATGGGTACCTGACGTTTTATGCTCCTGGGCGCAGGATGAGGAGGAG
CTTAGCTCCCAGCCAGCTGGCCAAAAGAAAGCCGGAAGTTAGACCCTCTGATGGTGAAGATTGG
CAACCTGGAGCAGCGACTCCTAAGAAACGGAAAGCCAGCAGTGAGACCCAGAGCCAGGAGTGTT
TCCTGTCTCCCTTCCGGAAACCTTTGATTCAGCTGACGAATCAACCACCGTGTCTGGACAGCAG
TCAACATGAAGCGTTTATTCGGAGCATTCTGTCAAAGCCTTTCAAAATCCCCATTCCAAATTAC
CAAGGTCCTCTGGGCTCTCGAGCATTGGGCCTCAAAAGGGCCGGGGTCCGCCGGGCCCTCCATG
ACCCCCTGGAAGAAGGTGCCCTGGTTCTGTACGAGCCTCCCCCACTGAGCGCCCATGACCAGCT
GAAGCTTGACAAGGAAAAGCTCCCCGTTCATGTGGTCGTCGATCCTGTCCTCAGCAAGGTCTTG
AGGCCTCATCAGAGAGAGGGCGTGAGGTTCCTGTGGGAGTGTGTCACCAGCCGCCGCATCCCCG
GGAGCCACGGCTGCATCATGGCCGACGAGATGGGCCTGGGCAAGACGCTGCAGTGCATCACGCT
GATGTGGACGCTTTTGCGCCAGAGTCCGGACTGCAAGCCGGAGATTGATAAGGCAGTGGTGGTG
TCGCCCTCCAGCCTGGTGAAGAACTGGTACAATGAAGTGGGGAAGTGGCTTGGAGGGAGGATCC
AACCTCTGGCCATCGATGGAGGATCGAAGGACGAGATAGACCAAAAACTGGAAGGATTCATGAA
CCAGCGGGGAGCCAGAGTGCCTTCTCCCATCCTCATCATTTCCTACGAGACCTTCCGCCTCCAC
GTTGGGGTCCTCCAGAAAGGGAGTGTTGGCCTGGTCATATGTGATGAGGGACACAGGCTGAAGA
ACTCCGAGAATCAGACTTACCAGGCCCTGAACAGCTTGAACACCAGCCGGCGGGTGCTCATCTC
TGGGACCCCCATCCAGAACGACCTCCTTGAGTATTTCAGCTTGGTCCATTTTGTTAATTCGGGC
CTCCTAGGAACTGCCCATGAGTTCAAGAAGCGTTTTGAACTGCCGATTCTGAAGGGTCGAGATG
CAGCGGCCAGTGAGGAAGACCGGCGGCTGGGAGAGGAGCGACTGCGGGAGCTCACCAGCATTGT
GAACAGGTGTCTAATACGGAGGACATCTGATATCCTTTCTAAATACCTGCCTGTGAAGATTGAG
CAGGTGGTTTGTTGCAGGCTGACACCCCTTCAGACTGAATTATACAAGAGGTTTTTGAGACAGG
CCAAGCCAGCAGAAGAGTTGCGTGAGGGCAAGATGAGTGTGTCTTCTCTCTCTTCCATCACGTC
CCTGAAGAAGCTGTGTAACCATCCAGCTCTAATCTATGACAAGTGTGTGGAAGAGGAAGATGGC
TTCGCAGGTGCCTTGGACTTCTTTCCCCCTGGTTATAGCTCCAAGGCTTTAGAGCCTCAGCTGT
CAGGTAAGATGCTGGTCCTTGATTACATTCTGGCGGTGACCCGAAGCCGCAGCAGTGACAAAGT
CGTGCTGGTGTCCAATTACACTCAGACATTGGACCTCTTTGAGAAACTCTGCCGGGCCCGAAGG
TACCTGTATGTTCGCTTGGATGGCACAATGTCCATTAAGAAGCGAGCCAAGGTTGTGGAGCGCT
TCAACAGCCCGTCGAGTCCAGACTTTGTCTTCATGCTGAGCAGCAAAGCTGGGGGCTGTGGCCT
CAATCTCATCGGGGCTAACCGCCTGGTCATGTTTGACCCTGACTGGAACCCAGCCAACGATGAA
CAAGCCATGGCCCGGGTCTGGCGTGACGGTCAAAAGAAGACCTGCTATATCTATCGCCTGCTGT
CTGCAGGAACCATTGAGGAGAAGATCTTTCAGCGTCAGAGCCACAAGAAGGCACTGAGCAGCTG
CGTGGTGGACGAGGAGCAGGATGTGGAGCGGCACTTCTCTCTAGGCGAACTGAAGGAGCTCTTT
ACCCTGGATGAGGCCAGCCTCAGTGACACACATGACAGGTTGCGCTGCCGTCGCTGTGTCAACA
ACCAGCAGGTGTGGCCACCCCCCGACGGTTCTGACTGCACCTCAGACCTGGCTCAGTGGAACCA
CAGCACTGATAAGCGGGGGCTCGCGGATGAGGTACTCCAGGCTGCCTGGCACGCTGCCTCCACT
GCCATCACCTTCGTCTTTCACCAGCGTTCCCACGAGGAGCAGCGGGGCCTCCGCTAATAACCAG
GGGCTCTGGGTGTGGCTGTTGGAGGAAGGAGAGGGGAGAGGGGGTCCCTGTCCCATGGGGCACG
GCTGAATTTTGTTCTCTGAGAGAAAAATCATCCAGAAGGGCTGCATGATGTTTGCCCAAAATTT
ATTTTTATAAGAAAACCTTTTGGTTAAAAAAGAAAAGGAAGGAATAAAGGTGTGAGAGGACTGA
AAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001116655	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAG09488	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000034469
	ENSSSCP00000034469.1
	ENSSSCP00015046076.1
	ENSSSCP00035005594.1
	ENSSSCP00055035341.1
	ENSSSCP00060010570.1
	ENSSSCP00065011395.1

RefSeq Acc Id:

NP_001116655 ⟸ NM_001123183

- UniProtKB:

B0M1M8 (UniProtKB/TrEMBL), A0A8D1RCN2 (UniProtKB/TrEMBL), A0A8D0QAG3 (UniProtKB/TrEMBL), A0A8D1T670 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MRRSLAPSQLAKRKPEVRPSDGEDWQPGAATPKKRKASSETQSQECFLSPFRKPLIQLTNQPPC
LDSSQHEAFIRSILSKPFKIPIPNYQGPLGSRALGLKRAGVRRALHDPLEEGALVLYEPPPLSA
HDQLKLDKEKLPVHVVVDPVLSKVLRPHQREGVRFLWECVTSRRIPGSHGCIMADEMGLGKTLQ
CITLMWTLLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLE
GFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALNSLNTSRR
VLISGTPIQNDLLEYFSLVHFVNSGLLGTAHEFKKRFELPILKGRDAAASEEDRRLGEERLREL
TSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELREGKMSVSSLS
SITSLKKLCNHPALIYDKCVEEEDGFAGALDFFPPGYSSKALEPQLSGKMLVLDYILAVTRSRS
SDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAG
GCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKA
LSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLRCRRCVNNQQVWPPPDGSDCTSDLA
QWNHSTDKRGLADEVLQAAWHAASTAITFVFHQRSHEEQRGLR

hide sequence

Ensembl Acc Id:

ENSSSCP00000034469 ⟸ ENSSSCT00000059309

Ensembl Acc Id:

ENSSSCP00000004220 ⟸ ENSSSCT00000004320

Protein Domains

Helicase ATP-binding Helicase C-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000003905	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015079917	UniProtKB/TrEMBL
	ENSSSCG00035012831	UniProtKB/TrEMBL
	ENSSSCG00055022570	UniProtKB/TrEMBL
	ENSSSCG00060018639	UniProtKB/TrEMBL
	ENSSSCG00065020856	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000059309	ENTREZGENE
	ENSSSCT00000059309.2	UniProtKB/TrEMBL
	ENSSSCT00015108593.1	UniProtKB/TrEMBL
	ENSSSCT00035016196.1	UniProtKB/TrEMBL
	ENSSSCT00055044351.1	UniProtKB/TrEMBL
	ENSSSCT00060025058.1	UniProtKB/TrEMBL
	ENSSSCT00065027786.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.10810	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
	SWI2/SNF2 ATPases, N-terminal domain	UniProtKB/TrEMBL
InterPro	Helicase_ATP-bd	UniProtKB/TrEMBL
	Helicase_C	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	SNF2-like_sf	UniProtKB/TrEMBL
	SNF2/RAD54-like_C	UniProtKB/TrEMBL
	SNF2_N	UniProtKB/TrEMBL
	SNF2_RAD54_helicase_repair	UniProtKB/TrEMBL
KEGG Report	ssc:100141305	UniProtKB/TrEMBL
NCBI Gene	RAD54L	ENTREZGENE
PANTHER	DNA EXCISION REPAIR PROTEIN ERCC-6-RELATED	UniProtKB/TrEMBL
	SNF2/RAD54 FAMILY MEMBER	UniProtKB/TrEMBL
Pfam	Helicase_C	UniProtKB/TrEMBL
	SNF2_N	UniProtKB/TrEMBL
PROSITE	HELICASE_ATP_BIND_1	UniProtKB/TrEMBL
	HELICASE_CTER	UniProtKB/TrEMBL
SMART	DEXDc	UniProtKB/TrEMBL
	HELICc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A4X1WBU3_PIG	UniProtKB/TrEMBL
	A0A8D0QAG3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1RCN2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1T670	ENTREZGENE, UniProtKB/TrEMBL
	B0M1M8	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A286ZS42	UniProtKB/TrEMBL
VGNC ID	VGNC:98281	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM