ADAM29 (ADAM metallopeptidase domain 29) - Rat Genome Database

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Gene: ADAM29 (ADAM metallopeptidase domain 29) Sus scrofa
Analyze
Symbol: ADAM29
Name: ADAM metallopeptidase domain 29
RGD ID: 14260051
Description: ENCODES a protein that exhibits metal ion binding (inferred); metalloendopeptidase activity (inferred); INVOLVED IN proteolysis (inferred); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN external side of plasma membrane (ortholog); sperm head plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: disintegrin and metalloproteinase domain-containing protein 29
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11415,302,879 - 15,307,649 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21416,491,921 - 16,530,014 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
proteolysis  (IEA)

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ADAM29
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11415,302,879 - 15,307,649 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21416,491,921 - 16,530,014 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ADAM29
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384174,918,358 - 174,978,180 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4174,829,668 - 174,978,180 (+)EnsemblGRCh38hg38GRCh38
GRCh374175,839,509 - 175,899,331 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364176,076,134 - 176,135,906 (+)NCBINCBI36Build 36hg18NCBI36
Build 344176,271,406 - 176,273,692NCBI
Celera4173,168,616 - 173,228,548 (+)NCBICelera
Cytogenetic Map4q34.1NCBI
HuRef4171,588,769 - 171,648,620 (+)NCBIHuRef
CHM1_14175,815,949 - 175,875,773 (+)NCBICHM1_1
T2T-CHM13v2.04178,256,372 - 178,316,203 (+)NCBIT2T-CHM13v2.0
Adam29
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39856,323,947 - 56,359,999 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl856,323,947 - 56,359,983 (-)EnsemblGRCm39 Ensembl
GRCm38855,870,912 - 55,906,964 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl855,870,912 - 55,906,948 (-)EnsemblGRCm38mm10GRCm38
MGSCv37858,349,709 - 58,385,761 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36858,763,054 - 58,799,090 (-)NCBIMGSCv36mm8
Celera858,527,430 - 58,566,352 (-)NCBICelera
Cytogenetic Map8B2NCBI
cM Map829.68NCBI
Adam24
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81658,281,748 - 58,287,735 (-)NCBIGRCr8
mRatBN7.21651,578,278 - 51,584,265 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1651,578,277 - 51,584,312 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01654,625,789 - 54,631,824 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1654,625,847 - 54,628,458 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01654,333,065 - 54,339,049 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41654,916,429 - 54,918,651 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11654,916,503 - 54,918,726 (-)NCBI
Celera1649,470,643 - 49,476,678 (-)NCBICelera
Cytogenetic Map16q12.1NCBI
Adam29
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540332,233,949 - 32,236,375 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540332,233,940 - 32,257,782 (-)NCBIChiLan1.0ChiLan1.0
ADAM29
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23172,666,680 - 172,727,706 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14173,046,705 - 173,107,718 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04167,133,174 - 167,194,160 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14179,368,671 - 179,428,753 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4179,426,082 - 179,428,753 (+)Ensemblpanpan1.1panPan2
ADAM29
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12525,372,342 - 25,442,760 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2526,024,913 - 26,095,792 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02525,536,308 - 25,607,243 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2525,604,567 - 25,607,212 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12525,470,229 - 25,540,838 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02525,373,125 - 25,443,529 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02525,524,740 - 25,595,635 (+)NCBIUU_Cfam_GSD_1.0
ADAM29
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17121,006,675 - 121,053,292 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037101,073,375 - 101,127,006 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adam29
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247696,491,682 - 6,509,400 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ADAM29
56 total Variants

Expression

RNA-SEQ Expression

mesenchyme
mesoderm
renal system
reproductive system
1 1 1 1

Sequence


RefSeq Acc Id: XM_021074178   ⟹   XP_020929837
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11415,302,879 - 15,307,649 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020929837 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00035039632.1
  ENSSSCP00055000037.1
RefSeq Acc Id: XP_020929837   ⟸   XM_021074178
- UniProtKB: A0A8D1D337 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
Disintegrin   Peptidase M12B


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00035069843 UniProtKB/TrEMBL
  ENSSSCG00055000022 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00035094354.1 UniProtKB/TrEMBL
  ENSSSCT00055000044.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.390.10 UniProtKB/TrEMBL
  4.10.70.10 UniProtKB/TrEMBL
InterPro ADAM_Cys-rich UniProtKB/TrEMBL
  Disintegrin_CS UniProtKB/TrEMBL
  Disintegrin_dom UniProtKB/TrEMBL
  Disintegrin_dom_sf UniProtKB/TrEMBL
  MetalloPept_cat_dom_sf UniProtKB/TrEMBL
  Peptidase_M12B UniProtKB/TrEMBL
  Peptidase_M12B_N UniProtKB/TrEMBL
  Reprolysin_adamalysin UniProtKB/TrEMBL
NCBI Gene ADAM29 ENTREZGENE
PANTHER A DISINTEGRIN AND METALLOPEPTIDASE DOMAIN 26B-RELATED UniProtKB/TrEMBL
  ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN UniProtKB/TrEMBL
Pfam ADAM_CR UniProtKB/TrEMBL
  Disintegrin UniProtKB/TrEMBL
  Pep_M12B_propep UniProtKB/TrEMBL
  Reprolysin UniProtKB/TrEMBL
PRINTS DISINTEGRIN UniProtKB/TrEMBL
PROSITE ADAM_MEPRO UniProtKB/TrEMBL
  DISINTEGRIN_1 UniProtKB/TrEMBL
  DISINTEGRIN_2 UniProtKB/TrEMBL
SMART ACR UniProtKB/TrEMBL
  DISIN UniProtKB/TrEMBL
Superfamily-SCOP Metalloproteases ('zincins'), catalytic domain UniProtKB/TrEMBL
  SSF57552 UniProtKB/TrEMBL
UniProt A0A8D1D337 ENTREZGENE, UniProtKB/TrEMBL