TNC (tenascin C) - Rat Genome Database

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Pathways
Gene: TNC (tenascin C) Sus scrofa
Analyze
Symbol: TNC
Name: tenascin C
RGD ID: 14238184
Description: ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN bud outgrowth involved in lung branching (ortholog); cellular response to prostaglandin D stimulus (ortholog); cellular response to retinoic acid (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH allergic conjunctivitis (ortholog); asbestosis (ortholog); asthma (ortholog); FOUND IN extracellular matrix of synaptic cleft (ortholog); glutamatergic synapse (ortholog); INTERACTS WITH 4-methylumbelliferone; bis(2-chloroethyl) sulfide; deoxynivalenol
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: cytotactin; glioma-associated-extracellular matrix antigen; GMEM; GP 150-225; hexabrachion; HXB; JI; myotendinous antigen; neuronectin; P230; tenascin; TN
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1255,533,238 - 255,630,376 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11255,533,235 - 255,630,381 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21286,732,751 - 286,813,962 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap1q21.1-q21.3NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:1722152   PMID:7530615   PMID:7538362   PMID:9498558   PMID:14681463   PMID:15123658   PMID:17145712   PMID:21530096   PMID:22261194   PMID:22301074   PMID:23882691  


Genomics

Comparative Map Data
TNC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1255,533,238 - 255,630,376 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11255,533,235 - 255,630,381 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21286,732,751 - 286,813,962 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap1q21.1-q21.3NCBI
TNC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389115,019,575 - 115,118,157 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9115,019,575 - 115,118,257 (-)Ensemblhg38GRCh38
GRCh379117,781,854 - 117,880,436 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369116,822,626 - 116,920,307 (-)NCBIBuild 36Build 36hg18NCBI36
Build 349114,862,366 - 114,959,993NCBI
Celera988,430,273 - 88,527,747 (-)NCBICelera
Cytogenetic Map9q33.1NCBI
HuRef987,386,539 - 87,484,951 (-)NCBIHuRef
CHM1_19117,928,574 - 118,027,020 (-)NCBICHM1_1
T2T-CHM13v2.09127,212,162 - 127,310,465 (-)NCBIT2T-CHM13v2.0
Tnc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39463,878,022 - 63,965,554 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl463,878,022 - 63,965,252 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38463,959,785 - 64,047,015 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl463,959,785 - 64,047,015 (-)Ensemblmm10GRCm38
MGSCv37463,620,819 - 63,681,760 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36463,446,149 - 63,507,087 (-)NCBIMGSCv36mm8
Celera462,620,454 - 62,681,423 (-)NCBICelera
Cytogenetic Map4C1NCBI
cM Map434.06NCBI
Tnc
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8582,391,340 - 82,476,197 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl582,391,340 - 82,476,131 (-)EnsemblGRCr8
mRatBN7.2577,375,851 - 77,460,712 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl577,375,851 - 77,460,624 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx579,772,326 - 79,857,198 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0581,589,535 - 81,674,415 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0581,565,002 - 81,649,884 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0579,789,686 - 79,874,555 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl579,789,671 - 79,874,671 (-)Ensemblrn6Rnor6.0
Rnor_5.0583,890,952 - 83,950,462 (-)NCBIRnor_5.0Rnor_5.0rn5
Celera576,306,295 - 76,365,869 (-)NCBICelera
Cytogenetic Map5q24NCBI
Tnc
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541912,569,547 - 12,662,958 (+)Ensembl
ChiLan1.0NW_00495541912,569,620 - 12,662,897 (+)NCBIChiLan1.0ChiLan1.0
TNC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21124,252,394 - 24,349,633 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1924,254,811 - 24,351,994 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0986,125,672 - 86,222,804 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19114,486,778 - 114,584,297 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9114,486,778 - 114,584,299 (-)EnsemblpanPan2panpan1.1
TNC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11169,077,532 - 69,169,673 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1169,077,535 - 69,170,281 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1167,478,996 - 67,543,867 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01170,201,293 - 70,293,471 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1170,201,298 - 70,293,416 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11168,715,128 - 68,780,124 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01168,756,416 - 68,820,385 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01169,487,404 - 69,552,684 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tnc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947184,403,727 - 184,487,858 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364874,172,886 - 4,233,126 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364874,172,263 - 4,256,780 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TNC
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11224,457,616 - 24,556,194 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1224,457,738 - 24,556,451 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603518,276,825 - 18,375,675 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tnc
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476020,044,826 - 20,137,616 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462476020,044,900 - 20,137,260 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Tnc
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1189,557,438 - 89,641,373 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in TNC
2882 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_214230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK394849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU407235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU466939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01040321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X61599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSSCT00000006041   ⟹   ENSSSCP00000005891
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,243 - 255,630,376 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000023943   ⟹   ENSSSCP00000024361
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,243 - 255,630,376 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000026819   ⟹   ENSSSCP00000027784
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,238 - 255,630,375 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000032138   ⟹   ENSSSCP00000022200
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,238 - 255,630,375 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000036896   ⟹   ENSSSCP00000044523
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,243 - 255,630,376 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000037131   ⟹   ENSSSCP00000034078
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,244 - 255,630,209 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000037550   ⟹   ENSSSCP00000043968
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,238 - 255,630,375 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000041382   ⟹   ENSSSCP00000047909
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,238 - 255,630,375 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000058254   ⟹   ENSSSCP00000059023
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,238 - 255,630,375 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000062234   ⟹   ENSSSCP00000058621
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,238 - 255,630,375 (-)Ensembl
RefSeq Acc Id: NM_214230   ⟹   NP_999395
RefSeq Status: VALIDATED
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,550 - 255,630,111 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083096   ⟹   XP_020938755
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,341 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083107   ⟹   XP_020938766
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,370 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083117   ⟹   XP_020938776
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,338 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083120   ⟹   XP_020938779
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,336 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083130   ⟹   XP_020938789
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,371 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083140   ⟹   XP_020938799
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,331 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083143   ⟹   XP_020938802
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,334 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083146   ⟹   XP_020938805
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,376 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083154   ⟹   XP_020938813
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,334 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083159   ⟹   XP_020938818
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,331 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083166   ⟹   XP_020938825
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,329 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083169   ⟹   XP_020938828
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,328 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083172   ⟹   XP_020938831
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,329 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083176   ⟹   XP_020938835
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,328 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083179   ⟹   XP_020938838
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,326 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083182   ⟹   XP_020938841
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,329 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083188   ⟹   XP_020938847
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,318 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083193   ⟹   XP_020938852
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,381 (-)NCBI
Sequence:
RefSeq Acc Id: XP_020938852   ⟸   XM_021083193
- Peptide Label: isoform X18
- UniProtKB: A0A8D1J3Q8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938805   ⟸   XM_021083146
- Peptide Label: isoform X8
- UniProtKB: A0A8D0ZSZ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938789   ⟸   XM_021083130
- Peptide Label: isoform X5
- UniProtKB: A0A287AKU7 (UniProtKB/TrEMBL),   A0A8D0ZT49 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938766   ⟸   XM_021083107
- Peptide Label: isoform X2
- UniProtKB: A0A8D0ZYS3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938755   ⟸   XM_021083096
- Peptide Label: isoform X1
- UniProtKB: A0A8D0ZYS3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938776   ⟸   XM_021083117
- Peptide Label: isoform X3
- UniProtKB: A0A8D1LTU4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938779   ⟸   XM_021083120
- Peptide Label: isoform X4
- UniProtKB: A0A8D0ZT49 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938813   ⟸   XM_021083154
- Peptide Label: isoform X9
- UniProtKB: A0A8D0ZT49 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938802   ⟸   XM_021083143
- Peptide Label: isoform X7
- UniProtKB: A0A8D0ZT49 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938818   ⟸   XM_021083159
- Peptide Label: isoform X10
- UniProtKB: A0A8D1IVJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938799   ⟸   XM_021083140
- Peptide Label: isoform X6
- UniProtKB: A0A8D0ZSZ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938831   ⟸   XM_021083172
- Peptide Label: isoform X13
- UniProtKB: A0A8D1L6G9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938841   ⟸   XM_021083182
- Peptide Label: isoform X16
- UniProtKB: A0A287AVF2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938825   ⟸   XM_021083166
- Peptide Label: isoform X11
- UniProtKB: A0A8D1L6G9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938835   ⟸   XM_021083176
- Peptide Label: isoform X14
- UniProtKB: A0A8D1J5G6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938828   ⟸   XM_021083169
- Peptide Label: isoform X12
- UniProtKB: A0A8D1J5G6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938838   ⟸   XM_021083179
- Peptide Label: isoform X15
- UniProtKB: A0A8D1ITS2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938847   ⟸   XM_021083188
- Peptide Label: isoform X17
- UniProtKB: A0A8D1J3Q8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_999395   ⟸   NM_214230
- Peptide Label: precursor
- UniProtKB: Q29116 (UniProtKB/Swiss-Prot),   P98142 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSSSCP00000059023   ⟸   ENSSSCT00000058254
Ensembl Acc Id: ENSSSCP00000047909   ⟸   ENSSSCT00000041382
Ensembl Acc Id: ENSSSCP00000027784   ⟸   ENSSSCT00000026819
Ensembl Acc Id: ENSSSCP00000005891   ⟸   ENSSSCT00000006041
Ensembl Acc Id: ENSSSCP00000034078   ⟸   ENSSSCT00000037131
Ensembl Acc Id: ENSSSCP00000058621   ⟸   ENSSSCT00000062234
Ensembl Acc Id: ENSSSCP00000043968   ⟸   ENSSSCT00000037550
Ensembl Acc Id: ENSSSCP00000044523   ⟸   ENSSSCT00000036896
Ensembl Acc Id: ENSSSCP00000022200   ⟸   ENSSSCT00000032138
Ensembl Acc Id: ENSSSCP00000024361   ⟸   ENSSSCT00000023943

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000005494 Ensembl, ENTREZGENE
Ensembl Transcript ENSSSCT00000006041 ENTREZGENE
  ENSSSCT00000026819 ENTREZGENE
  ENSSSCT00000032138 ENTREZGENE
  ENSSSCT00000036896 ENTREZGENE
  ENSSSCT00000037550 ENTREZGENE
  ENSSSCT00000041382 ENTREZGENE
  ENSSSCT00000058254 ENTREZGENE
Gene3D-CATH 2.20.25.10 UniProtKB/Swiss-Prot
  2.60.40.10 UniProtKB/Swiss-Prot
  3.90.215.10 UniProtKB/Swiss-Prot
  Laminin UniProtKB/Swiss-Prot
InterPro ECM_Regulatory_Proteins UniProtKB/Swiss-Prot
  EGF-like_dom UniProtKB/Swiss-Prot
  Fibrinogen-like_C UniProtKB/Swiss-Prot
  Fibrinogen_a/b/g_C_1 UniProtKB/Swiss-Prot
  Fibrinogen_a/b/g_C_dom UniProtKB/Swiss-Prot
  FN3_dom UniProtKB/Swiss-Prot
  FN3_sf UniProtKB/Swiss-Prot
  Ig-like_fold UniProtKB/Swiss-Prot
KEGG Report ssc:397460 UniProtKB/Swiss-Prot
NCBI Gene TNC ENTREZGENE
PANTHER PTHR46708:SF1 UniProtKB/Swiss-Prot
  TENASCIN UniProtKB/Swiss-Prot
Pfam EGF_TEN UniProtKB/Swiss-Prot
  EGF_Teneurin UniProtKB/Swiss-Prot
  Fibrinogen_C UniProtKB/Swiss-Prot
  fn3 UniProtKB/Swiss-Prot
PROSITE EGF_1 UniProtKB/Swiss-Prot
  EGF_2 UniProtKB/Swiss-Prot
  EGF_3 UniProtKB/Swiss-Prot
  FIBRINOGEN_C_2 UniProtKB/Swiss-Prot
  FN3 UniProtKB/Swiss-Prot
SMART EGF UniProtKB/Swiss-Prot
  FBG UniProtKB/Swiss-Prot
  FN3 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF49265 UniProtKB/Swiss-Prot
  SSF56496 UniProtKB/Swiss-Prot
UniProt A0A286ZR70_PIG UniProtKB/TrEMBL
  A0A287AIY5_PIG UniProtKB/TrEMBL
  A0A287AKU7 ENTREZGENE, UniProtKB/TrEMBL
  A0A287AVF2 ENTREZGENE, UniProtKB/TrEMBL
  A0A287BQB6_PIG UniProtKB/TrEMBL
  A0A287BR78_PIG UniProtKB/TrEMBL
  A0A4X1UVE5_PIG UniProtKB/TrEMBL
  A0A4X1UVK6_PIG UniProtKB/TrEMBL
  A0A4X1UVN8_PIG UniProtKB/TrEMBL
  A0A4X1UXI8_PIG UniProtKB/TrEMBL
  A0A4X1UYY8_PIG UniProtKB/TrEMBL
  A0A4X1UYZ2_PIG UniProtKB/TrEMBL
  A0A4X1UZ46_PIG UniProtKB/TrEMBL
  A0A4X1UZF5_PIG UniProtKB/TrEMBL
  A0A4X1V065_PIG UniProtKB/TrEMBL
  A0A4X1V071_PIG UniProtKB/TrEMBL
  A0A8D0NLJ0_PIG UniProtKB/TrEMBL
  A0A8D0NRF0_PIG UniProtKB/TrEMBL
  A0A8D0NSM1_PIG UniProtKB/TrEMBL
  A0A8D0NSR5_PIG UniProtKB/TrEMBL
  A0A8D0NU90_PIG UniProtKB/TrEMBL
  A0A8D0NUE2_PIG UniProtKB/TrEMBL
  A0A8D0NVD2_PIG UniProtKB/TrEMBL
  A0A8D0NYP4_PIG UniProtKB/TrEMBL
  A0A8D0P147_PIG UniProtKB/TrEMBL
  A0A8D0RK64_PIG UniProtKB/TrEMBL
  A0A8D0RLJ1_PIG UniProtKB/TrEMBL
  A0A8D0RM35_PIG UniProtKB/TrEMBL
  A0A8D0RMR6_PIG UniProtKB/TrEMBL
  A0A8D0RMX2_PIG UniProtKB/TrEMBL
  A0A8D0RNQ9_PIG UniProtKB/TrEMBL
  A0A8D0RPM7_PIG UniProtKB/TrEMBL
  A0A8D0RQG9_PIG UniProtKB/TrEMBL
  A0A8D0RW72_PIG UniProtKB/TrEMBL
  A0A8D0X7T8_PIG UniProtKB/TrEMBL
  A0A8D0X7X2_PIG UniProtKB/TrEMBL
  A0A8D0XB76_PIG UniProtKB/TrEMBL
  A0A8D0XC15_PIG UniProtKB/TrEMBL
  A0A8D0XC92_PIG UniProtKB/TrEMBL
  A0A8D0XCN3_PIG UniProtKB/TrEMBL
  A0A8D0XE04_PIG UniProtKB/TrEMBL
  A0A8D0XEA8_PIG UniProtKB/TrEMBL
  A0A8D0XEX0_PIG UniProtKB/TrEMBL
  A0A8D0ZP57_PIG UniProtKB/TrEMBL
  A0A8D0ZPK1_PIG UniProtKB/TrEMBL
  A0A8D0ZPU4_PIG UniProtKB/TrEMBL
  A0A8D0ZSZ7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0ZT49 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0ZXP0_PIG UniProtKB/TrEMBL
  A0A8D0ZYR7_PIG UniProtKB/TrEMBL
  A0A8D0ZYS3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0ZYX2_PIG UniProtKB/TrEMBL
  A0A8D1CC02_PIG UniProtKB/TrEMBL
  A0A8D1CUK7_PIG UniProtKB/TrEMBL
  A0A8D1G1B6_PIG UniProtKB/TrEMBL
  A0A8D1G2D3_PIG UniProtKB/TrEMBL
  A0A8D1G2P5_PIG UniProtKB/TrEMBL
  A0A8D1G3U3_PIG UniProtKB/TrEMBL
  A0A8D1G3Y6_PIG UniProtKB/TrEMBL
  A0A8D1G5W3_PIG UniProtKB/TrEMBL
  A0A8D1G832_PIG UniProtKB/TrEMBL
  A0A8D1G8S6_PIG UniProtKB/TrEMBL
  A0A8D1ITS2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1IVJ0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1J3Q8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1J5G6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1KMM8_PIG UniProtKB/TrEMBL
  A0A8D1KMR8_PIG UniProtKB/TrEMBL
  A0A8D1L6G9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1LTN3_PIG UniProtKB/TrEMBL
  A0A8D1LTN8_PIG UniProtKB/TrEMBL
  A0A8D1LTU4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1LUY5_PIG UniProtKB/TrEMBL
  A0A8D1LV37_PIG UniProtKB/TrEMBL
  A0A8D1LV73_PIG UniProtKB/TrEMBL
  A0A8D1LV79_PIG UniProtKB/TrEMBL
  A0A8D1LVB4_PIG UniProtKB/TrEMBL
  A0A8D1LVR6_PIG UniProtKB/TrEMBL
  A0A8D1R899_PIG UniProtKB/TrEMBL
  A0A8D1R9Y3_PIG UniProtKB/TrEMBL
  A0A8D1RA61_PIG UniProtKB/TrEMBL
  A0A8D1REF1_PIG UniProtKB/TrEMBL
  A0A8D1RIT5_PIG UniProtKB/TrEMBL
  A0A8D1RJL6_PIG UniProtKB/TrEMBL
  A0A8D1RK77_PIG UniProtKB/TrEMBL
  A0A8D1RKS0_PIG UniProtKB/TrEMBL
  A0A8D1RLG5_PIG UniProtKB/TrEMBL
  A0A8D1TAT4_PIG UniProtKB/TrEMBL
  A0A8D1VXE5_PIG UniProtKB/TrEMBL
  A0A8D1VZ96_PIG UniProtKB/TrEMBL
  A0A8D1VZB7_PIG UniProtKB/TrEMBL
  A0A8D1VZY5_PIG UniProtKB/TrEMBL
  A0A8D1VZY7_PIG UniProtKB/TrEMBL
  A0A8D1W000_PIG UniProtKB/TrEMBL
  A0A8D1W1D3_PIG UniProtKB/TrEMBL
  A0A8D1ZKE5_PIG UniProtKB/TrEMBL
  A0A8D1ZLP7_PIG UniProtKB/TrEMBL
  A0A8D1ZN52_PIG UniProtKB/TrEMBL
  A0A8D1ZNN4_PIG UniProtKB/TrEMBL
  A0A8D1ZPL0_PIG UniProtKB/TrEMBL
  A0A8D1ZQ88_PIG UniProtKB/TrEMBL
  A0A8D1ZQN8_PIG UniProtKB/TrEMBL
  A0A8D1ZVK4_PIG UniProtKB/TrEMBL
  A0A8D2BND2_PIG UniProtKB/TrEMBL
  A0A8D2BNF3_PIG UniProtKB/TrEMBL
  A0A8D2CEG6_PIG UniProtKB/TrEMBL
  F1SMI5_PIG UniProtKB/TrEMBL
  I3LDR6_PIG UniProtKB/TrEMBL
  I3LJU9_PIG UniProtKB/TrEMBL
  I3LUI4_PIG UniProtKB/TrEMBL
  P98142 ENTREZGENE
  Q29116 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary P98142 UniProtKB/Swiss-Prot
VGNC ID VGNC:103192 ENTREZGENE