MIR92B (microRNA mir-92b) - Rat Genome Database

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Gene: MIR92B (microRNA mir-92b) Sus scrofa
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Symbol: MIR92B (Ensembl: ssc-mir-92b)
Name: microRNA mir-92b (Ensembl:ssc-mir-92b)
RGD ID: 14135292
Description: microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: microRNA 92b; ssc-mir-92b
RGD Orthologs
Human
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl494,624,285 - 94,624,364 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1494,624,285 - 94,624,364 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24103,407,102 - 103,407,181 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (ISO)

Molecular Function

References
Additional References at PubMed
PMID:16381832   PMID:19917043   PMID:20433717   PMID:21312241   PMID:24499489  


Genomics

Comparative Map Data
MIR92B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl494,624,285 - 94,624,364 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1494,624,285 - 94,624,364 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24103,407,102 - 103,407,181 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MIR92A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381391,351,314 - 91,351,391 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1391,351,314 - 91,351,391 (+)EnsemblGRCh38hg38GRCh38
GRCh371392,003,568 - 92,003,645 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361390,801,568 - 90,801,645 (+)NCBINCBI36Build 36hg18NCBI36
Celera1372,850,539 - 72,850,616 (+)NCBICelera
Cytogenetic Map13q31.3NCBI
HuRef1372,599,403 - 72,599,480 (+)NCBIHuRef
CHM1_11391,972,208 - 91,972,285 (+)NCBICHM1_1
T2T-CHM13v2.01390,553,890 - 90,553,967 (+)NCBIT2T-CHM13v2.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSSSCT00000021609
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl494,624,285 - 94,624,364 (-)Ensembl
RefSeq Acc Id: NR_035389
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1494,624,285 - 94,624,364 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000020014 Ensembl, ENTREZGENE
Ensembl Transcript ENSSSCT00000021609 ENTREZGENE
miRBase MI0013126 ENTREZGENE
NCBI Gene MIR92B ENTREZGENE
RNAcentral URS000025576D RNACentral
  URS000075CFE7 RNACentral
  URS000075E7E9 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-02 MIR92B  microRNA mir-92b    microRNA 92b  Symbol and/or name change 5135510 APPROVED