Advanced Search (OLGA)

Gene: LOC100621115 (nitric oxide-associated protein 1-like) Sus scrofa

Analyze

Symbol:

LOC100621115 (Ensembl: NOA1)

Name:

nitric oxide-associated protein 1-like (Ensembl:nitric oxide associated 1)

RGD ID:

14095669

Description:

ENCODES a protein that exhibits GTP binding (inferred); INVOLVED IN mitochondrial ribosome assembly (inferred); mitochondrion organization (inferred); FOUND IN matrix side of mitochondrial inner membrane (inferred); mitochondrial inner membrane (inferred); mitochondrion (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NOA1 (nitric oxide associated 1)	HGNC	EggNOG, Ensembl, Inparanoid, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Noa1 (nitric oxide associated 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Noa1 (nitric oxide associated 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Noa1 (nitric oxide associated 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NOA1 (nitric oxide associated 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NOA1 (nitric oxide associated 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Noa1 (nitric oxide associated 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LOC103247084 (nitric oxide-associated protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Noa1 (nitric oxide associated 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	56,221,663 - 56,231,920 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	56,221,642 - 56,232,182 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	58,999,457 - 59,009,959 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mitochondrial ribosome assembly (IEA)

mitochondrion organization (IEA)

Cellular Component

matrix side of mitochondrial inner membrane (IEA)

mitochondrial inner membrane (IEA)

mitochondrion (IEA)

Molecular Function

GTP binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

LOC100621115
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	56,221,663 - 56,231,920 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	56,221,642 - 56,232,182 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	58,999,457 - 59,009,959 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NOA1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	56,963,350 - 56,977,606 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	56,963,350 - 56,977,606 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	57,829,516 - 57,843,772 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	57,524,273 - 57,538,583 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	57,670,444 - 57,684,754	NCBI
Celera	4	55,335,470 - 55,349,777 (-)	NCBI		Celera
Cytogenetic Map	4	q12	NCBI
HuRef	4	53,782,949 - 53,797,258 (-)	NCBI		HuRef
CHM1_1	4	57,864,912 - 57,879,218 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	60,454,802 - 60,469,054 (-)	NCBI		T2T-CHM13v2.0

Noa1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	77,442,016 - 77,458,276 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	77,442,029 - 77,457,931 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	77,294,169 - 77,310,413 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	77,294,182 - 77,310,084 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	77,723,194 - 77,739,111 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	78,369,026 - 78,384,833 (-)	NCBI		MGSCv36	mm8
Celera	5	74,561,388 - 74,577,311 (-)	NCBI		Celera
Cytogenetic Map	5	C3.3	NCBI
cM Map	5	41.64	NCBI

Noa1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	31,189,570 - 31,205,600 (+)	NCBI		GRCr8
mRatBN7.2	14	30,835,264 - 30,851,294 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	30,835,247 - 30,851,293 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	31,216,115 - 31,232,159 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	32,524,442 - 32,540,486 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	31,009,098 - 31,025,142 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	33,107,868 - 33,124,172 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	33,108,024 - 33,124,171 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	32,901,338 - 32,918,110 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	33,107,963 - 33,123,993 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	33,107,962 - 33,123,992 (+)	NCBI
Celera	14	30,154,477 - 30,170,507 (+)	NCBI		Celera
Cytogenetic Map	14	p11	NCBI

Noa1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955447	14,151,241 - 14,164,856 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955447	14,151,193 - 14,164,969 (+)	NCBI	ChiLan1.0	ChiLan1.0

NOA1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	72,797,710 - 72,815,870 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	73,003,153 - 73,021,301 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	66,940,529 - 66,954,998 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	73,515,058 - 73,528,368 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	73,515,058 - 73,528,368 (+)	Ensembl	panpan1.1		panPan2

NOA1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	49,078,509 - 49,091,427 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	49,078,361 - 49,090,864 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	48,969,253 - 48,982,132 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	49,693,111 - 49,705,991 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	49,691,850 - 49,705,468 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	49,365,665 - 49,378,746 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	48,894,917 - 48,908,014 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	49,839,955 - 49,852,844 (-)	NCBI		UU_Cfam_GSD_1.0

Noa1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	27,225,204 - 27,240,382 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936482	19,055,213 - 19,073,258 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936482	19,057,360 - 19,073,031 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LOC103247084
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666128	175,429 - 196,777 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Noa1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624761	12,430,935 - 12,446,408 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624761	12,430,403 - 12,445,931 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in LOC100621115
179 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005666716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013978739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002346682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_304891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01077184	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000027317 ⟹ ENSSSCP00000026361

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	8	56,223,996 - 56,231,892 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000055983 ⟹ ENSSSCP00000040286

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	8	56,221,663 - 56,231,920 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000063529 ⟹ ENSSSCP00000043980

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	8	56,077,021 - 56,231,920 (-)	Ensembl

RefSeq Acc Id:

XM_005666716 ⟹ XP_005666773

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	8	56,221,642 - 56,232,181 (-)	NCBI

Sequence:

show sequence

CCTAATGGTAAAAAGACCAAAAAAAAAAAAAAAAAAAAGTGCGATTTCTGAGCTGCAGGCAGCA
GCCGAAGCCCGACCAAAGCCTCACTCGCTGGCTGACCTAGCCAACCCCGCCGAGCCCGGACCTC
CCGTGCCTTTAGCTCCGCCTTAGGTGGGTTCTCGGGCCTCAGCGGCTTCATCGCGAGATCTCAC
GAGATGCGATCGGGAGGAGGAGCCGAAGGGCGACGCTGACCAATGACAGCTCTCTGGTCGTCCC
AGGCTTTTTCCGGTTTACCAAGCAGCTGGGGCCGCAGTGCGCGTGCAAACCCGTGGCCTGCGCT
TGGCCCGCGCCCACGTGCCCATGCCGCCCGCGCGCCTCGCTCCTAGGCTGCTGTGCGGCCTCCT
GCGAGGTGGCTCTCCCACGGCCAGGCGCCTTGGTCTCCGGGACGCGCTCCTGGCAAACCGGTGG
CCCGCCCCTGGCCCGCGCCCGCGTTTCCATGCTGCCCACGCGCCTCGCTCCTAGGCTGCTGTGC
GGCTTCCTGCAGGGAGCCTCTCCCACGGCCGCGCGCCTTGGTCTCCAGGACGCGCTCCTGGAGA
GGAGATGTGCGGCCAGCCTTTCATCCCAGCGCCCGTGGGCCCTGGGCCGGGGGCGTTCTCGGTA
CCGGACTGCGACTGGGGGCAGCGAAGGAAGGGCCGACCTAGAGGAGAGTTTTCTGTTCCCCGAG
TACATCCCGGAGCCGGAGCCCGCACCGACCCTCCAAGACCAGCTACGAGAGGTGCAGCAGCGGC
AAGAAGAGAACGAACGACAGATGCAGCAGCGGCGGGAGGAGCGGCGCCAGCAGAAGCTCCGGGC
CGCTCGGCGGGTGCAGCGGGCGCAGCCGGTCGTGGGGCACCCGGACCCGACGGTGGCACCCAGC
GGCCTGAACTGTTCGGGATGCGGGGCGGAGCTGCACTGCCAGGACCCCGGCGTGCCCGGCTACC
TGCCCAGCGAGAAGTTCCTCCGCGCGGCGGCGCAGGCGGACGGCGGGCTGGCGAGGACGGTGTG
CCAGCGCTGCTGGTTGCTGGTGCACCACCGGCGCGCCCTACGCCTGCAGGTGAGTCCCGAGAAG
TACCTGGAGCTCGTGAGCGCCGCGCTGCGGCGGCCCGAGCCCGCCCTGGTGTTATACATGGTGG
ACCTGCTGGATCTGCCCGACGCCCTGCTGCGCCACCTGCCCGCGCTCGTGGGCCCCAAGCAGCT
GATCGTGCTGGGGAACAAGGTGGACCTGCTGCCCCAGGACGCCCCCGGATACCGGCAGCGCATC
CGGGAGCGACTGTGGGACGACTGTGCCCGCGTCGGGCTCCTGCCGCCCCCTGGCTCCCGGAGGT
CCCAACACCCCGGCCGGAAGCAGCCGCGGGACCAGGCGGAGAAGGCGAACCACTCGGCCAAGTC
CCGCGCGGTGCTTAGGGACGTGCGGCTCATCAGCGCCAAGACTGGCTACGGAGTCGAAGAGTTG
ATCTCCGCGCTCCAGCGCTCCTGGCGCTACCGCGGCGACGTCTACCTGGTTGGCGCCACCAACG
CTGGCAAGTCCACCCTCTTCAACACGCTCCTGGAGTCCGATTACTGCATCGCCAAGGGCGCTGA
GGCTATCGACAGGGCCACCATCTCCGCTTGGCCTGGTACTACATTAAACCTTCTAAAGTTTCCT
ATTTGCAACCCAACTCCTTACAGAATGTTTCAAAGGCAAAAAAGGCTTAAAAGAGATGCAGTTG
AAGCAGAAGAAGATCTTAGTCAGCAAGAACAAAATCAACTTAATCTCTTAAAAAAGCATGGTTA
TGTAGTAGGGAGAGTTGGAAGGACCTTCTCATGCTCAGAACAGAAGGAGGAAGCTGCCTTTGAG
TTCGATGCCAATTCTCTTGCCTTTGACATGGGCGATGATCCTGTTATGGTTGCTGATAAACCCA
CCAGACGCATAGAACTGACCCCACAAGATGTGAAAGATGCCCGCTGGTTTTATGACACCCCCGG
AATTACCAAAGACAACTGTATTTTAAATCTTCTAACAGAAAAAGAAGTAAATATTGTTTTGCCA
ACACAGGCCATTGTTCCAAGAACTTTTGTGCTTCAACCAGGAATGGTTCTATTTTTGGGTGCTA
TAGGCCGCATAGATTTTCTGCAGGGAAACCAATCAGCTTGGTTTACAGTTGTGGCTTCCAACTT
CCTTCCCGTGCACATCACTTCCTTGGACAAGGCAGATACTGTGTATAAGAAGCACGCGGGTCAC
ACCTTACTCAAGGTTCCAGTGGGTGGAAAAGAAAGAATGGCAGGCTTTCCTCCTCTTGTTGCTG
AGGACATCACCCTGGACGAGGGATTGGGCGAATCGGAAGCTGTGGCTGACATCAAGTTCTCCTC
GGCAGGTTGGGTTGCAGTAACGCCACAGTTTAAGGACAGACTGCACCTCCGAGGCCATATGCCT
CAAGGAACTTTTCTCACAGTCCGGCCCCCACTCTTGCCCCACATAGTTAACATCAAAGGACCGC
GAATCCAGAGAAGTGTTGCCTATCAAACCAAGAAGCCTCCTCCCCTTGTGTACAATGTGCAGAA
AAAGAAAAAGAGGTAAATGTCCGGACTGATCTGTTCACACTGAAGAGTAACTCTACACAACCTA
CAGTGTACACTGCATTGTAGTAAATGTCACTAGATGAAGCCCCTCCCACTCCCACCCTTTCAGA
CAACCAAGGACTGAGCCTCTTCTTAATACGTTGAATTTGCAAGCTCAAGTGATTTTTGGTTGGG
TGTGTATCTGACCGAGATACACCTAAAAATGAGCGCTGCTCAAGTCTTCCCACTACATTTTTTT
TGAGACCAGGTGGCATTTCTTGAGGGAGCAGCTTAGCCGTTGGCATGTGAACAAATGGCAGAAT
ATCAGTTTCTCCCGAAGACATTGGCTTAAAGGAGACGGAAATGAGAAGGTGGCTCTGCTCCGTG
TAGTCATAGTCATCCAAGGACCCACCTGGGGAACGCACCCCAGCTTCCTTCTCTAGATTGAAGG
ATGCTCGAGTTGTCATCCTTTCCCAGCATCAGGGAGAACGTCCCCACGGAGGAGGAGGAAGAGC
TGGAAGCAGTACACATCACAGCATCTGTAGGTCAGCAGTGACATGGCCACACCCCACAGGGAAG
CTGGGGGTCCAGAGGGCAATGGGGACTGTGGGGTTTTATTACTTAAGGGCAGAATGGACACTGG
GAAACAAGTAGTTCTCCTTACATAACCCTAAAGTGCCTGAAAACTCGCAGAGAATGGCTCACAG
GATATCTCAGTCAGGTCTGCAAGGATCAGAGCACTTCAAGTGTTTTATCAGCAACTGCCATGAA
TGCTGTGTGAGCCTCCATCAGTTTGCAGTCTTAACGTCATGTGTGTCCTGACCAGAGTGAGCAC
TCGAGCCATGGACAGTGAAACTTCTGGGGAGTCACGTCCTGGGTCCCAGGGTTGAGCTGAAGGC
TCGTGGAGAAAGTCGACCTGAAACACATCTAGGAGCCTCCATGGACTCTGGTTCAGCATGACAC
TCTAGCCCCTTCTCACTAGTGGGTCGTCGTCATCGTCGTGGGATAAATGGTTAGTATTTTAAGA
GGCAACCTGTAAAGCTTTGTAGGTCTCAGCTGCGTTGTTTCAGAGTGGACGTCTGGTTGGCATC
TTCGAGAAGTAGTTCTTTACCTGCCTCCCTAATGCCTTGATACTAAAAGCCAGTAGCAACTCCC
CTGCCCCATCCTTTCCTGTGACAACTGCAAAGTGCCAGTGACAATTCCACACCCACCCTTGAGA
GAGTGGGAGCTCCCCAAGCTGAGAAAATGATTTGTAGTAGGATTTTTTTTTTCCTTTCTTCTGG
AGCGAATGAAATACCGTTAATTTTACAACTTAAAATCGTGACCATTGTATTTCTATCTGTTGTT
CCTAGTTTGAAGGTTAGGCCTGAATCTTTACATGACATGAAGGAAATAGGGTAAACCTAGCCTT
GGTGGAGAACTACAGAACCCCAAAGCTGGTGCTGTTTTTACCCTGATAACTTACAATGTAGGAA
GCGAGATGTTCCTCCCTCATTTTGTCTCTAGGCTCTTAGACCTCAACTAGCAAAGATGCAGTGT
TTAAGCTTTCACCAATTTATATTTTCAGGTTTCTCTAAGCTCCAAACTCAATGGTTATGTTTTG
ACTGAGGTTGTTCTAAAAATGTTCTAAGGGGAGTTCCCATCATGGCACAGCGGAAATGAATCCA
ACTAGGGACCATGAGGTTGTGGGTTCAATCCTTGGCCTCACTCAGTGGATTAAGTATCTGGCAT
TGCTGTGAGCTGTGGTGTAGGCCTCGGACGCAGCTTGGATTGGGCATTGTTGTCGCTCTGGCAT
GGGCCTGCACCTGCAGCTCTGGTTGGACCCCTGACCTGGGAACCTTCATATACTGTGGGTTTGG
CCCTAAAAAGACAAAAGACACTAAAAAATTAAAAAATATATATATGTTCCAAGGTACCTTGCTA
GGCTAGTCGCAGACAGTGCAGTTTACTAAGTTGAAGTTTCCCTGTTGTATTAGTTAATCTGTTT
GGGTCTTTGTTTTCACATCTCTGAAATGAGGGACTGACACTAGATACTCCTCAGTCCTAACTTT
TTATGATTCTCAGCAAAAACAAGCAGGAGAGCCGGGAAAGTGTGGTGACCATACCTCAGACCAA
AAAGGCCCCCGAACCCCTGGCCTGGGAAACTCCATATGCCACAGGTGCAGCCCTGAGAAACTAC
AACAAAAAGGCCCCCCGAGCATCAACAGCAGAGAACTTCTGCTGGGATCTGCTGTTAACTTACA
CCACATCCTGCAAGCCTAATGCAACCCAGCATCCCTGCTGGTGCATCCAGAGGTCCACGGGGGA
TTTTCTAGAAGAAAGCTCTCTTACTGTGTTGGTTTCTGAGCTAAGTCAGCTTATTAATACTAAT
CCATTGACCCAAGTATGAAGACTGCCCTTTCGTCACCATCATTTACACGGTGGCAGCATGCAGG
AGTTAGCACAGAGAAATTATGGCACAGCTGGCACAACGCCCTCACCCCCACTAAACAAGTTGTT
TAAGACCAAAGAAATACTTCCACTAGGTTTATTACTCAGAGGGTAGACTCTGAGAGGAAAAAGG
AAGCTTCTGGAAAATAGGAGCCTGAGGTGCTAAGCCATGGATGATTTAAGTATGCTGTAGACAT
GCTCAGGAATGTTCAGATCATGAAAGTCCTGTACTAAATAAGGAAATATAGATGCTCTCTGCCG
TGAAGGGGATATGTGAGGCATCATTCCTCTATGATGCTCAACTGTTAATCTCCAGCTATCGCAG
CCCCTTCAGGGTGTCCGTGTGGCAGACGACACGACAGAGACAGCAGGAGCAGGCCTGTTGGAGT
CATGTGAATCTGAAGTCTGGTGTCTACTGTGTAAGCATTACTCTTGCAGGTCAAGGGTAGACAT
CCCCCCTAAGGAGAGCAGCCAAGAGAAAAGGGAACACTGAGAAAGAATGAAATGATGTTCTTGC
TCCACCAGACAGAGCCCTGGGGGAGGCAAGGCGGGGCAGGGGACCAGAAGCTGGCCGAGCACTG
GGTGCCTTCCCACTGAGACACCAGCAGCTCTGCTGGGCCTGGCACAGCAGGGCCTCCAGGTTTG
TCATCTGCAGGAAACCAGCCTTGAGCTCCATTTTGCAGGAAGTACCAGATCAAGAAACGCAGGC
ACAGGTGAACGCATCAACTCCTTGCCTGGCATGGGAAATATCTTAAAGCAGATGAGACGCAGGG
GAGCTCCGCAGTGAGGCCCTAATGACTGGTTAGCTTGCTGTTCATGGTGATGGGACATACAGAG
CAGGTTACACTGCGCAATCCAAACAAGTTGTAATCCATGACCTGGTGAAATACAAGCATATCCC
CTACCCCATGTAATAGGTTTTCCTGGGGACCAGAAGTTTGTTAATGGATCCTGCCACTAAATCA
AGGGATGTTCAGCCTGAGAAAAGTTAAAACTTATTTTGTTTTGTATTAAAATGTCTTTCTGCAG
CCGTTTTTTCATCAGAGGCCAAATTTTAAAAATTTAAAGTGAATAAGGTTTTATTTAAAAGTGA
TTGTTGTGAGCTAACGATTTCTGTCTCCCCCTTTTTGTTTGTCTCAGCAACTTTGAAGGAGACG
CTGCTGTTCTAAGCAGGGAGGAAAGATACCATGGACTTTAAAAAATAAAGCTGCTTTTAATGTC
ACATAGAAGTCAAAA

hide sequence

RefSeq Acc Id:

XM_013978739 ⟹ XP_013834193

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	8	56,221,642 - 56,232,182 (-)	NCBI

Sequence:

show sequence

ACCTAATGGTAAAAAGACCAAAAAAAAAAAAAAAAAAAAGTGCGATTTCTGAGCTGCAGGCAGC
AGCCGAAGCCCGACCAAAGCCTCACTCGCTGGCTGACCTAGCCAACCCCGCCGAGCCCGGACCT
CCCGTGCCTTTAGCTCCGCCTTAGGTGGGTTCTCGGGCCTCAGCGGCTTCATCGCGAGATCTCA
CGAGATGCGATCGGGAGGAGGAGCCGAAGGGCGACGCTGACCAATGACAGCTCTCTGGTCGTCC
CAGGCTTTTTCCGGTTTACCAAGCAGCTGGGGCCGCAGTGCGCGTGCAAACCCGTGGCCTGCGC
TTGGCCCGCGCCCACGTGCCCATGCCGCCCGCGCGCCTCGCTCCTAGGCTGCTGTGCGGCCTCC
TGCGAGGTGGCTCTCCCACGGCCAGGCGCCTTGGTCTCCGGGACGCGCTCCTGGCAAACCGGTG
GCCCGCCCCTGGCCCGCGCCCGCGTTTCCATGCTGCCCACGCGCCTCGCTCCTAGGCTGCTGTG
CGGCTTCCTGCAGGGAGCCTCTCCCACGGCCGCGCGCCTTGGTCTCCAGGACGCGCTCCTGGAG
AGGAGATGTGCGGCCAGCCTTTCATCCCAGCGCCCGTGGGCCCTGGGCCGGGGGCGTTCTCGGT
ACCGGACTGCGACTGGGGGCAGCGAAGGAAGGGCCGACCTAGAGGAGAGTTTTCTGTTCCCCGA
GTACATCCCGGAGCCGGAGCCCGCACCGACCCTCCAAGACCAGCTACGAGAGGTGCAGCAGCGG
CAAGAAGAGAACGAACGACAGATGCAGCAGCGGCGGGAGGAGCGGCGCCAGCAGAAGCTCCGGG
CCGCTCGGCGGGTGCAGCGGGCGCAGCCGGTCGTGGGGCACCCGGACCCGACGGTGGCACCCAG
CGGCCTGAACTGTTCGGGATGCGGGGCGGAGCTGCACTGCCAGGACCCCGGCGTGCCCGGCTAC
CTGCCCAGCGAGAAGTTCCTCCGCGCGGCGGCGCAGGCGGACGGCGGGCTGGCGAGGACGGTGT
GCCAGCGCTGCTGGTTGCTGGTGCACCACCGGCGCGCCCTACGCCTGCAGGTGAGTCCCGAGAA
GTACCTGGAGCTCGTGAGCGCCGCGCTGCGGCGGCCCGAGCCCGCCCTGGTGTTATACATGGTG
GACCTGCTGGATCTGCCCGACGCCCTGCTGCGCCACCTGCCCGCGCTCGTGGGCCCCAAGCAGC
TGATCGTGCTGGGGAACAAGGTGGACCTGCTGCCCCAGGACGCCCCCGGATACCGGCAGCGCAT
CCGGGAGCGACTGTGGGACGACTGTGCCCGCGTCGGGCTCCTGCCGCCCCCTGGCTCCCGGAGG
TCCCAACACCCCGGCCGGAAGCAGCCGCGGGACCAGGCGGAGAAGGCGAACCACTCGGCCAAGT
CCCGCGCGGTGCTTAGGGACGTGCGGCTCATCAGCGCCAAGACTGGCTACGGAGTCGAAGAGTT
GATCTCCGCGCTCCAGCGCTCCTGGCGCTACCGCGGCGACGTCTACCTGGTTGGCGCCACCAAC
GCTGGCAAGTCCACCCTCTTCAACACGCTCCTGGAGTCCGATTACTGCATCGCCAAGGGCGCTG
AGGCTATCGACAGGGCCACCATCTCCGCTTGGCCTGGTACTACATTAAACCTTCTAAAGTTTCC
TATTTGCAACCCAACTCCTTACAGAATGTTTCAAAGGCAAAAAAGGCTTAAAAGAGATGCAGTT
GAAGCAGAAGAAGATCTTAGTCAGCAAGAACAAAATCAACTTAATCTCTTAAAAAAGCATGGTT
ATGTAGTAGGGAGAGTTGGAAGGACCTTCTCATGCTCAGAACAGAAGGAGGAAGCTGCCTTTGA
GTTCGATGCCAATTCTCTTGCCTTTGACATGGGCGATGATCCTGTTATGGTTGCTGATAAACCC
ACCAGACGCATAGAACTGACCCCACAAGATGTGAAAGATGCCCGCTGGTTTTATGACACCCCCG
GAATTACCAAAGACAACTGTATTTTAAATCTTCTAACAGAAAAAGAAGTAAATATTGTTTTGCC
AACACAGGCCATTGTTCCAAGAACTTTTGTGCTTCAACCAGGAATGGTTCTATTTTTGGGTGCT
ATAGGCCGCATAGATTTTCTGCAGGGAAACCAATCAGCTTGGTTTACAGTTGTGGCTTCCAACT
TCCTTCCCGTGCACATCACTTCCTTGGACAAGGCAGATACTGTGTATAAGAAGCACGCGGGTCA
CACCTTACTCAAGGTTGGGTTGCAGTAACGCCACAGTTTAAGGACAGACTGCACCTCCGAGGCC
ATATGCCTCAAGGAACTTTTCTCACAGTCCGGCCCCCACTCTTGCCCCACATAGTTAACATCAA
AGGACCGCGAATCCAGAGAAGTGTTGCCTATCAAACCAAGAAGCCTCCTCCCCTTGTGTACAAT
GTGCAGAAAAAGAAAAAGAGGTAAATGTCCGGACTGATCTGTTCACACTGAAGAGTAACTCTAC
ACAACCTACAGTGTACACTGCATTGTAGTAAATGTCACTAGATGAAGCCCCTCCCACTCCCACC
CTTTCAGACAACCAAGGACTGAGCCTCTTCTTAATACGTTGAATTTGCAAGCTCAAGTGATTTT
TGGTTGGGTGTGTATCTGACCGAGATACACCTAAAAATGAGCGCTGCTCAAGTCTTCCCACTAC
ATTTTTTTTGAGACCAGGTGGCATTTCTTGAGGGAGCAGCTTAGCCGTTGGCATGTGAACAAAT
GGCAGAATATCAGTTTCTCCCGAAGACATTGGCTTAAAGGAGACGGAAATGAGAAGGTGGCTCT
GCTCCGTGTAGTCATAGTCATCCAAGGACCCACCTGGGGAACGCACCCCAGCTTCCTTCTCTAG
ATTGAAGGATGCTCGAGTTGTCATCCTTTCCCAGCATCAGGGAGAACGTCCCCACGGAGGAGGA
GGAAGAGCTGGAAGCAGTACACATCACAGCATCTGTAGGTCAGCAGTGACATGGCCACACCCCA
CAGGGAAGCTGGGGGTCCAGAGGGCAATGGGGACTGTGGGGTTTTATTACTTAAGGGCAGAATG
GACACTGGGAAACAAGTAGTTCTCCTTACATAACCCTAAAGTGCCTGAAAACTCGCAGAGAATG
GCTCACAGGATATCTCAGTCAGGTCTGCAAGGATCAGAGCACTTCAAGTGTTTTATCAGCAACT
GCCATGAATGCTGTGTGAGCCTCCATCAGTTTGCAGTCTTAACGTCATGTGTGTCCTGACCAGA
GTGAGCACTCGAGCCATGGACAGTGAAACTTCTGGGGAGTCACGTCCTGGGTCCCAGGGTTGAG
CTGAAGGCTCGTGGAGAAAGTCGACCTGAAACACATCTAGGAGCCTCCATGGACTCTGGTTCAG
CATGACACTCTAGCCCCTTCTCACTAGTGGGTCGTCGTCATCGTCGTGGGATAAATGGTTAGTA
TTTTAAGAGGCAACCTGTAAAGCTTTGTAGGTCTCAGCTGCGTTGTTTCAGAGTGGACGTCTGG
TTGGCATCTTCGAGAAGTAGTTCTTTACCTGCCTCCCTAATGCCTTGATACTAAAAGCCAGTAG
CAACTCCCCTGCCCCATCCTTTCCTGTGACAACTGCAAAGTGCCAGTGACAATTCCACACCCAC
CCTTGAGAGAGTGGGAGCTCCCCAAGCTGAGAAAATGATTTGTAGTAGGATTTTTTTTTTCCTT
TCTTCTGGAGCGAATGAAATACCGTTAATTTTACAACTTAAAATCGTGACCATTGTATTTCTAT
CTGTTGTTCCTAGTTTGAAGGTTAGGCCTGAATCTTTACATGACATGAAGGAAATAGGGTAAAC
CTAGCCTTGGTGGAGAACTACAGAACCCCAAAGCTGGTGCTGTTTTTACCCTGATAACTTACAA
TGTAGGAAGCGAGATGTTCCTCCCTCATTTTGTCTCTAGGCTCTTAGACCTCAACTAGCAAAGA
TGCAGTGTTTAAGCTTTCACCAATTTATATTTTCAGGTTTCTCTAAGCTCCAAACTCAATGGTT
ATGTTTTGACTGAGGTTGTTCTAAAAATGTTCTAAGGGGAGTTCCCATCATGGCACAGCGGAAA
TGAATCCAACTAGGGACCATGAGGTTGTGGGTTCAATCCTTGGCCTCACTCAGTGGATTAAGTA
TCTGGCATTGCTGTGAGCTGTGGTGTAGGCCTCGGACGCAGCTTGGATTGGGCATTGTTGTCGC
TCTGGCATGGGCCTGCACCTGCAGCTCTGGTTGGACCCCTGACCTGGGAACCTTCATATACTGT
GGGTTTGGCCCTAAAAAGACAAAAGACACTAAAAAATTAAAAAATATATATATGTTCCAAGGTA
CCTTGCTAGGCTAGTCGCAGACAGTGCAGTTTACTAAGTTGAAGTTTCCCTGTTGTATTAGTTA
ATCTGTTTGGGTCTTTGTTTTCACATCTCTGAAATGAGGGACTGACACTAGATACTCCTCAGTC
CTAACTTTTTATGATTCTCAGCAAAAACAAGCAGGAGAGCCGGGAAAGTGTGGTGACCATACCT
CAGACCAAAAAGGCCCCCGAACCCCTGGCCTGGGAAACTCCATATGCCACAGGTGCAGCCCTGA
GAAACTACAACAAAAAGGCCCCCCGAGCATCAACAGCAGAGAACTTCTGCTGGGATCTGCTGTT
AACTTACACCACATCCTGCAAGCCTAATGCAACCCAGCATCCCTGCTGGTGCATCCAGAGGTCC
ACGGGGGATTTTCTAGAAGAAAGCTCTCTTACTGTGTTGGTTTCTGAGCTAAGTCAGCTTATTA
ATACTAATCCATTGACCCAAGTATGAAGACTGCCCTTTCGTCACCATCATTTACACGGTGGCAG
CATGCAGGAGTTAGCACAGAGAAATTATGGCACAGCTGGCACAACGCCCTCACCCCCACTAAAC
AAGTTGTTTAAGACCAAAGAAATACTTCCACTAGGTTTATTACTCAGAGGGTAGACTCTGAGAG
GAAAAAGGAAGCTTCTGGAAAATAGGAGCCTGAGGTGCTAAGCCATGGATGATTTAAGTATGCT
GTAGACATGCTCAGGAATGTTCAGATCATGAAAGTCCTGTACTAAATAAGGAAATATAGATGCT
CTCTGCCGTGAAGGGGATATGTGAGGCATCATTCCTCTATGATGCTCAACTGTTAATCTCCAGC
TATCGCAGCCCCTTCAGGGTGTCCGTGTGGCAGACGACACGACAGAGACAGCAGGAGCAGGCCT
GTTGGAGTCATGTGAATCTGAAGTCTGGTGTCTACTGTGTAAGCATTACTCTTGCAGGTCAAGG
GTAGACATCCCCCCTAAGGAGAGCAGCCAAGAGAAAAGGGAACACTGAGAAAGAATGAAATGAT
GTTCTTGCTCCACCAGACAGAGCCCTGGGGGAGGCAAGGCGGGGCAGGGGACCAGAAGCTGGCC
GAGCACTGGGTGCCTTCCCACTGAGACACCAGCAGCTCTGCTGGGCCTGGCACAGCAGGGCCTC
CAGGTTTGTCATCTGCAGGAAACCAGCCTTGAGCTCCATTTTGCAGGAAGTACCAGATCAAGAA
ACGCAGGCACAGGTGAACGCATCAACTCCTTGCCTGGCATGGGAAATATCTTAAAGCAGATGAG
ACGCAGGGGAGCTCCGCAGTGAGGCCCTAATGACTGGTTAGCTTGCTGTTCATGGTGATGGGAC
ATACAGAGCAGGTTACACTGCGCAATCCAAACAAGTTGTAATCCATGACCTGGTGAAATACAAG
CATATCCCCTACCCCATGTAATAGGTTTTCCTGGGGACCAGAAGTTTGTTAATGGATCCTGCCA
CTAAATCAAGGGATGTTCAGCCTGAGAAAAGTTAAAACTTATTTTGTTTTGTATTAAAATGTCT
TTCTGCAGCCGTTTTTTCATCAGAGGCCAAATTTTAAAAATTTAAAGTGAATAAGGTTTTATTT
AAAAGTGATTGTTGTGAGCTAACGATTTCTGTCTCCCCCTTTTTGTTTGTCTCAGCAACTTTGA
AGGAGACGCTGCTGTTCTAAGCAGGGAGGAAAGATACCATGGACTTTAAAAAATAAAGCTGCTT
TTAATGTCACATAGAAGTCAAAA

hide sequence

RefSeq Acc Id:

XR_002346682

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	8	56,221,642 - 56,232,182 (-)	NCBI

Sequence:

show sequence

ACCTAATGGTAAAAAGACCAAAAAAAAAAAAAAAAAAAAGTGCGATTTCTGAGCTGCAGGCAGC
AGCCGAAGCCCGACCAAAGCCTCACTCGCTGGCTGACCTAGCCAACCCCGCCGAGCCCGGACCT
CCCGTGCCTTTAGCTCCGCCTTAGGTGGGTTCTCGGGCCTCAGCGGCTTCATCGCGAGATCTCA
CGAGATGCGATCGGGAGGAGGAGCCGAAGGGCGACGCTGACCAATGACAGCTCTCTGGTCGTCC
CAGGCTTTTTCCGGTTTACCAAGCAGCTGGGGCCGCAGTGCGCGTGCAAACCCGTGGCCTGCGC
TTGGCCCGCGCCCACGTGCCCATGCCGCCCGCGCGCCTCGCTCCTAGGCTGCTGTGCGGCCTCC
TGCGAGGTGGCTCTCCCACGGCCAGGCGCCTTGGTCTCCGGGACGCGCTCCTGGCAAACCGGTG
GCCCGCCCCTGGCCCGCGCCCGCGTTTCCATGCTGCCCACGCGCCTCGCTCCTAGGCTGCTGTG
CGGCTTCCTGCAGGGAGCCTCTCCCACGGCCGCGCGCCTTGGTCTCCAGGACGCGCTCCTGGAG
AGGAGATGTGCGGCCAGCCTTTCATCCCAGCGCCCGTGGGCCCTGGGCCGGGGGCGTTCTCGGT
ACCGGACTGCGACTGGGGGCAGCGAAGGAAGGGCCGACCTAGAGGAGAGTTTTCTGTTCCCCGA
GTACATCCCGGAGCCGGAGCCCGCACCGACCCTCCAAGACCAGCTACGAGAGGTGCAGCAGCGG
CAAGAAGAGAACGAACGACAGATGCAGCAGCGGCGGGAGGAGCGGCGCCAGCAGAAGCTCCGGG
CCGCTCGGCGGGTGCAGCGGGCGCAGCCGGTCGTGGGGCACCCGGACCCGACGGTGGCACCCAG
CGGCCTGAACTGTTCGGGATGCGGGGCGGAGCTGCACTGCCAGGACCCCGGCGTGCCCGGCTAC
CTGCCCAGCGAGAAGTTCCTCCGCGCGGCGGCGCAGGCGGACGGCGGGCTGGCGAGGACGGTGT
GCCAGCGCTGCTGGTTGCTGGTGCACCACCGGCGCGCCCTACGCCTGCAGGTGAGTCCCGAGAA
GTACCTGGAGCTCGTGAGCGCCGCGCTGCGGCGGCCCGAGCCCGCCCTGGTGTTATACATGGTG
GACCTGCTGGATCTGCCCGACGCCCTGCTGCGCCACCTGCCCGCGCTCGTGGGCCCCAAGCAGC
TGATCGTGCTGGGGAACAAGGTGGACCTGCTGCCCCAGGACGCCCCCGGATACCGGCAGCGCAT
CCGGGAGCGACTGTGGGACGACTGTGCCCGCGTCGGGCTCCTGCCGCCCCCTGGCTCCCGGAGG
TCCCAACACCCCGGCCGGAAGCAGCCGCGGGACCAGGCGGAGAAGGCGAACCACTCGGCCAAGT
CCCGCGCGGTGCTTAGGGACGTGCGGCTCATCAGCGCCAAGACTGGCTACGGAGTCGAAGAGTT
GATCTCCGCGCTCCAGCGCTCCTGGCGCTACCGCGGCGACGTCTACCTGGTTGGCGCCACCAAC
GCTGGCAAGTCCACCCTCTTCAACACGCTCCTGGAGTCCGATTACTGCATCGCCAAGGGCGCTG
AGGCTATCGACAGGGCCACCATCTCCGCTTGGCCTGGTACTACATTAAACCTTCTAAAGTTTCC
TATTTGCAACCCAACTCCTTACAGAATGTTTCAAAGGCAAAAAAGGCTTAAAAGAGATGCAGTT
GAAGCAGAAGAAGATCTTAGTCAGCAAGAACAAAATCAACTTAATCTCTTAAAAAAGCATGGTT
ATGTAGTAGGGAGAGTTGGAAGGACCTTCTCATGCTCAGAACAGAAGGAGGAAGCTGCCTTTGA
GTTCGATGCCAATTCTCTTGCCTTTGACATGGGCGATGATCCTGTTATGGTTGCTGATAAACCC
ACCAGACGCATAGAACTGACCCCACAAGATGTGAAAGATGCCCGCTGGTTTTATGACACCCCCG
GAATTACCAAAGACAACTGTATTTTAAATCTTCTAACAGAAAAAGAAGTAAATATTGTTTTGCC
AACACAGGCCATTGTTCCAAGAACTTTTGTGCTTCAACCAGGAATGGTTCTATTTTTGGGTGCT
ATAGGCCGCATAGATTTTCTGCAGGGAAACCAATCAGCTTGGTTTACAGTTGTGGCTTCCAACT
TCCTTCCCGTGCACATCACTTCCTTGGACAAGGCAGATACTGTGTATAAGAAGCACGCGGGTCA
CACCTTACTCAAGGTTGGGTTGCAGTAACGCCACAGTTTAAGGACAGACTGCACCTCCGAGGCC
ATATGCCTCAAGGAACTTTTCTCACAGTCCGGCCCCCACTCTTGCCCCACATAGTTAACATCAA
AGGACCGCGAATCCAGAGAAGTGTTGCCTATCAAACCAAGAAGCCTCCTCCCCTTGTGTACAAT
GTGCAGAAAAAGAAAAAGAGGTAAATGTCCGGACTGATCTGTTCACACTGAAGAGTAACTCTAC
ACAACCTACAGTGTACACTGCATTGTAGTAAATGTCACTAGATGAAGCCCCTCCCACTCCCACC
CTTTCAGACAACCAAGGACTGAGCCTCTTCTTAATACGTTGAATTTGCAAGCTCAAGTGATTTT
TGGTTGGGTGTGTATCTGACCGAGATACACCTAAAAATGAGCGCTGCTCAAGTCTTCCCACTAC
ATTTTTTTTGAGACCAGGTGGCATTTCTTGAGGGAGCAGCTTAGCCGTTGGCATGTGAACAAAT
GGCAGAATATCAGTTTCTCCCGAAGACATTGGCTTAAAGGAGACGGAAATGAGAAGGTGGCTCT
GCTCCGTGTAGTCATAGTCATCCAAGGACCCACCTGGGGAACGCACCCCAGCTTCCTTCTCTAG
ATTGAAGGATGCTCGAGTTGTCATCCTTTCCCAGCATCAGGGAGAACGTCCCCACGGAGGAGGA
GGAAGAGCTGGAAGCAGTACACATCACAGCATCTGTAGGTCAGCAGTGACATGGCCACACCCCA
CAGGGAAGCTGGGGGTCCAGAGGGCAATGGGGACTGTGGGGTTTTATTACTTAAGGGCAGAATG
GACACTGGGAAACAAGTAGTTCTCCTTACATAACCCTAAAGTGCCTGAAAACTCGCAGAGAATG
GCTCACAGGATATCTCAGTCAGGTCTGCAAGGATCAGAGCACTTCAAGTGTTTTATCAGCAACT
GCCATGAATGCTGTGTGAGCCTCCATCAGTTTGCAGTCTTAACGTCATGTGTGTCCTGACCAGA
GTGAGCACTCGAGCCATGGACAGTGAAACTTCTGGGGAGTCACGTCCTGGGTCCCAGGGTTGAG
CTGAAGGCTCGTGGAGAAAGTCGACCTGAAACACATCTAGGAGCCTCCATGGACTCTGGTTCAG
CATGACACTCTAGCCCCTTCTCACTAGTGGGTCGTCGTCATCGTCGTGGGATAAATGCAACTTT
GAAGGAGACGCTGCTGTTCTAAGCAGGGAGGAAAGATACCATGGACTTTAAAAAATAAAGCTGC
TTTTAATGTCACATAGAAGTCAAAA

hide sequence

RefSeq Acc Id:

XR_304891

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	8	56,221,642 - 56,232,181 (-)	NCBI

Sequence:

show sequence

CCTAATGGTAAAAAGACCAAAAAAAAAAAAAAAAAAAAGTGCGATTTCTGAGCTGCAGGCAGCA
GCCGAAGCCCGACCAAAGCCTCACTCGCTGGCTGACCTAGCCAACCCCGCCGAGCCCGGACCTC
CCGTGCCTTTAGCTCCGCCTTAGGTGGGTTCTCGGGCCTCAGCGGCTTCATCGCGAGATCTCAC
GAGATGCGATCGGGAGGAGGAGCCGAAGGGCGACGCTGACCAATGACAGCTCTCTGGTCGTCCC
AGGCTTTTTCCGGTTTACCAAGCAGCTGGGGCCGCAGTGCGCGTGCAAACCCGTGGCCTGCGCT
TGGCCCGCGCCCACGTGCCCATGCCGCCCGCGCGCCTCGCTCCTAGGCTGCTGTGCGGCCTCCT
GCGAGGTGGCTCTCCCACGGCCAGGCGCCTTGGTCTCCGGGACGCGCTCCTGGCAAACCGGTGG
CCCGCCCCTGGCCCGCGCCCGCGTTTCCATGCTGCCCACGCGCCTCGCTCCTAGGCTGCTGTGC
GGCTTCCTGCAGGGAGCCTCTCCCACGGCCGCGCGCCTTGGTCTCCAGGACGCGCTCCTGGAGA
GGAGATGTGCGGCCAGCCTTTCATCCCAGCGCCCGTGGGCCCTGGGCCGGGGGCGTTCTCGGTA
CCGGACTGCGACTGGGGGCAGCGAAGGAAGGGCCGACCTAGAGGAGAGTTTTCTGTTCCCCGAG
TACATCCCGGAGCCGGAGCCCGCACCGACCCTCCAAGACCAGCTACGAGAGGTGCAGCAGCGGC
AAGAAGAGAACGAACGACAGATGCAGCAGCGGCGGGAGGAGCGGCGCCAGCAGAAGCTCCGGGC
CGCTCGGCGGGTGCAGCGGGCGCAGCCGGTCGTGGGGCACCCGGACCCGACGGTGGCACCCAGC
GGCCTGAACTGTTCGGGATGCGGGGCGGAGCTGCACTGCCAGGACCCCGGCGTGCCCGGCTACC
TGCCCAGCGAGAAGTTCCTCCGCGCGGCGGCGCAGGCGGACGGCGGGCTGGCGAGGACGGTGTG
CCAGCGCTGCTGGTTGCTGGTGCACCACCGGCGCGCCCTACGCCTGCAGGTGAGTCCCGAGAAG
TACCTGGAGCTCGTGAGCGCCGCGCTGCGGCGGCCCGAGCCCGCCCTGGTGTTATACATGGTGG
ACCTGCTGGATCTGCCCGACGCCCTGCTGCGCCACCTGCCCGCGCTCGTGGGCCCCAAGCAGCT
GATCGTGCTGGGGAACAAGGTGGACCTGCTGCCCCAGGACGCCCCCGGATACCGGCAGCGCATC
CGGGAGCGACTGTGGGACGACTGTGCCCGCGTCGGGCTCCTGCCGCCCCCTGGCTCCCGGAGGT
CCCAACACCCCGGCCGGAAGCAGCCGCGGGACCAGGCGGAGAAGGCGAACCACTCGGCCAAGTC
CCGCGCGGTGCTTAGGGACGTGCGGCTCATCAGCGCCAAGACTGGCTACGGAGTCGAAGAGTTG
ATCTCCGCGCTCCAGCGCTCCTGGCGCTACCGCGGCGACGTCTACCTGGTTGGCGCCACCAACG
CTGGCAAGTCCACCCTCTTCAACACGCTCCTGGAGTCCGATTACTGCATCGCCAAGGGCGCTGA
GGCTATCGACAGGGCCACCATCTCCGCTTGGCCTGGTACTACATTAAACCTTCTAAAGTTTCCT
ATTTGCAACCCAACTCCTTACAGAATGTTTCAAAGGCAAAAAAGGCTTAAAAGAGATGCAGTTG
AAGCAGAAGAAGATCTTAGTCAGCAAGAACAAAATCAACTTAATCTCTTAAAAAAGCATGGTTA
TGTAGTAGGGAGAGTTGGAAGGACCTTCTCATGCTCAGAACAGAAGGAGGAAGCTGCCTTTGAG
TTCGATGCCAATTCTCTTGCCTTTGACATGGGCGATGATCCTGTTATGGTTGCTGATAAACCCA
CCAGACGCATAGAACTGACCCCACAAGATGTGAAAGATGCCCGCTGGTTTTATGACACCCCCGG
AATTACCAAAGACAACTGTATTTTAAATCTTCTAACAGAAAAAGAAGTAAATATTGTTTTGCCA
ACACAGGCCATTGTTCCAAGAACTTTTGTGCTTCAACCAGGAATGGTTCTATTTTTGGGTGCTA
TAGGCCGCATAGATTTTCTGCAGGGAAACCAATCAGCTTGGTTTACAGTTGTGGCTTCCAACTT
CCTTCCCGTGCACATCACTTCCTTGGACAAGGCAGATACTGTGTATAAGAAGCACGCGGGTCAC
ACCTTACTCAAGGTTCCAGTGGGTGGAAAAGAAAGAATGGCAGGCTTTCCTCCTCTTGTTGCTG
AGGACATCACCCTGGACGAGGGATTGGGCGAATCGGAAGCTGTGGCTGACATCAAGTTCTCCTC
GGCAGGTTGGGTTGCAGTAACGCCACAGTTTAAGGACAGACTGCACCTCCGAGGCCATATGCCT
CAAGGAACTTTTCTCACAGTCCGGCCCCCACTCTTGCCCCACATAGTTAACATCAAAGGACCGC
GAATCCAGAGAAGTGTTGCCTATCAAACCAAGAAGCCTCCTCCCCTTGTGTACAATGTGCAGAA
AAAGAAAAAGAGGTAAATGTCCGGACTGATCTGTTCACACTGAAGAGTAACTCTACACAACCTA
CAGTGTACACTGCATTGTAGTAAATGTCACTAGATGAAGCCCCTCCCACTCCCACCCTTTCAGA
CAACCAAGGACTGAGCCTCTTCTTAATACGTTGAATTTGCAAGCTCAAGTGATTTTTGGTTGGG
TGTGTATCTGACCGAGATACACCTAAAAATGAGCGCTGCTCAAGTCTTCCCACTACATTTTTTT
TGAGACCAGGTGGCATTTCTTGAGGGAGCAGCTTAGCCGTTGGCATGTGAACAAATGGCAGAAT
ATCAGTTTCTCCCGAAGACATTGGCTTAAAGGAGACGGAAATGAGAAGGTGGCTCTGCTCCGTG
TAGTCATAGTCATCCAAGGACCCACCTGGGGAACGCACCCCAGCTTCCTTCTCTAGATTGAAGG
ATGCTCGAGTTGTCATCCTTTCCCAGCATCAGGGAGAACGTCCCCACGGAGGAGGAGGAAGAGC
TGGAAGCAGTACACATCACAGCATCTGTAGGTCAGCAGTGACATGGCCACACCCCACAGGGAAG
CTGGGGGTCCAGAGGGCAATGGGGACTGTGGGGTTTTATTACTTAAGGGCAGAATGGACACTGG
GAAACAAGTAGTTCTCCTTACATAACCCTAAAGTGCCTGAAAACTCGCAGAGAATGGCTCACAG
GATATCTCAGTCAGGTCTGCAAGGATCAGAGCACTTCAAGTGTTTTATCAGCAACTGCCATGAA
TGCTGTGTGAGCCTCCATCAGTTTGCAGTCTTAACGTCATGTGTGTCCTGACCAGAGTGAGCAC
TCGAGCCATGGACAGTGAAACTTCTGGGGAGTCACGTCCTGGGTCCCAGGGTTGAGCTGAAGGC
TCGTGGAGAAAGTCGACCTGAAACACATCTAGGAGCCTCCATGGACTCTGGTTCAGCATGACAC
TCTAGCCCCTTCTCACTAGTGGGTCGTCGTCATCGTCGTGGGATAAATGCAACTTTGAAGGAGA
CGCTGCTGTTCTAAGCAGGGAGGAAAGATACCATGGACTTTAAAAAATAAAGCTGCTTTTAATG
TCACATAGAAGTCAAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005666773	(Get FASTA)	NCBI Sequence Viewer
	XP_013834193	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000026361.3
	ENSSSCP00000040286
	ENSSSCP00000040286.1
	ENSSSCP00015021081.1
	ENSSSCP00015021123.1
	ENSSSCP00025005149.1
	ENSSSCP00025005153.1
	ENSSSCP00025005162.1
	ENSSSCP00035018387.1
	ENSSSCP00060030127.1
	ENSSSCP00065012994.1
	ENSSSCP00070019519.1
	ENSSSCP00070019524.1
	ENSSSCP00070019529.1

RefSeq Acc Id:	XP_013834193 ⟸ XM_013978739
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D0QRD8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPTRLAPRLLCGFLQGASPTAARLGLQDALLERRCAASLSSQRPWALGRGRSRYRTATGGSEG RADLEESFLFPEYIPEPEPAPTLQDQLREVQQRQEENERQMQQRREERRQQKLRAARRVQRAQP VVGHPDPTVAPSGLNCSGCGAELHCQDPGVPGYLPSEKFLRAAAQADGGLARTVCQRCWLLVHH RRALRLQVSPEKYLELVSAALRRPEPALVLYMVDLLDLPDALLRHLPALVGPKQLIVLGNKVDL LPQDAPGYRQRIRERLWDDCARVGLLPPPGSRRSQHPGRKQPRDQAEKANHSAKSRAVLRDVRL ISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATISA WPGTTLNLLKFPICNPTPYRMFQRQKRLKRDAVEAEEDLSQQEQNQLNLLKKHGYVVGRVGRTF SCSEQKEEAAFEFDANSLAFDMGDDPVMVADKPTRRIELTPQDVKDARWFYDTPGITKDNCILN LLTEKEVNIVLPTQAIVPRTFVLQPGMVLFLGAIGRIDFLQGNQSAWFTVVASNFLPVHITSLD KADTVYKKHAGHTLLKVGLQ hide sequence

RefSeq Acc Id:	XP_005666773 ⟸ XM_005666716
- Peptide Label:	isoform X1
- UniProtKB:	A0A287A8M3 (UniProtKB/TrEMBL), A0A4X1TW70 (UniProtKB/TrEMBL), A0A8D1VW84 (UniProtKB/TrEMBL), A0A8D1XXU2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPTRLAPRLLCGFLQGASPTAARLGLQDALLERRCAASLSSQRPWALGRGRSRYRTATGGSEG RADLEESFLFPEYIPEPEPAPTLQDQLREVQQRQEENERQMQQRREERRQQKLRAARRVQRAQP VVGHPDPTVAPSGLNCSGCGAELHCQDPGVPGYLPSEKFLRAAAQADGGLARTVCQRCWLLVHH RRALRLQVSPEKYLELVSAALRRPEPALVLYMVDLLDLPDALLRHLPALVGPKQLIVLGNKVDL LPQDAPGYRQRIRERLWDDCARVGLLPPPGSRRSQHPGRKQPRDQAEKANHSAKSRAVLRDVRL ISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCIAKGAEAIDRATISA WPGTTLNLLKFPICNPTPYRMFQRQKRLKRDAVEAEEDLSQQEQNQLNLLKKHGYVVGRVGRTF SCSEQKEEAAFEFDANSLAFDMGDDPVMVADKPTRRIELTPQDVKDARWFYDTPGITKDNCILN LLTEKEVNIVLPTQAIVPRTFVLQPGMVLFLGAIGRIDFLQGNQSAWFTVVASNFLPVHITSLD KADTVYKKHAGHTLLKVPVGGKERMAGFPPLVAEDITLDEGLGESEAVADIKFSSAGWVAVTPQ FKDRLHLRGHMPQGTFLTVRPPLLPHIVNIKGPRIQRSVAYQTKKPPPLVYNVQKKKKR hide sequence

Ensembl Acc Id:

ENSSSCP00000040286 ⟸ ENSSSCT00000055983

Ensembl Acc Id:

ENSSSCP00000026361 ⟸ ENSSSCT00000027317

Ensembl Acc Id:

ENSSSCP00000043980 ⟸ ENSSSCT00000063529

Protein Domains

G NOA1/YqeH-like C-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000025792	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015039594	UniProtKB/TrEMBL
	ENSSSCG00025009952	UniProtKB/TrEMBL
	ENSSSCG00035034736	UniProtKB/TrEMBL
	ENSSSCG00060051350	UniProtKB/TrEMBL
	ENSSSCG00065023856	UniProtKB/TrEMBL
	ENSSSCG00070012100	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000027317.4	UniProtKB/TrEMBL
	ENSSSCT00000055983	ENTREZGENE
	ENSSSCT00000055983.2	UniProtKB/TrEMBL
	ENSSSCT00015052673.1	UniProtKB/TrEMBL
	ENSSSCT00015052783.1	UniProtKB/TrEMBL
	ENSSSCT00025013108.1	UniProtKB/TrEMBL
	ENSSSCT00025013119.1	UniProtKB/TrEMBL
	ENSSSCT00025013137.1	UniProtKB/TrEMBL
	ENSSSCT00035046012.1	UniProtKB/TrEMBL
	ENSSSCT00060069881.1	UniProtKB/TrEMBL
	ENSSSCT00065031751.1	UniProtKB/TrEMBL
	ENSSSCT00070023601.1	UniProtKB/TrEMBL
	ENSSSCT00070023606.1	UniProtKB/TrEMBL
	ENSSSCT00070023612.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
InterPro	GTP_binding_domain	UniProtKB/TrEMBL
	Mito_transl_resp_regulator	UniProtKB/TrEMBL
	NOA1/YqeH-like_C	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
KEGG Report	ssc:100621115	UniProtKB/TrEMBL
NCBI Gene	LOC100621115	ENTREZGENE
PANTHER	NITRIC OXIDE-ASSOCIATED PROTEIN 1	UniProtKB/TrEMBL
	NITRIC OXIDE-ASSOCIATED PROTEIN 1	UniProtKB/TrEMBL
Pfam	MMR_HSR1	UniProtKB/TrEMBL
	YqeH-like_C	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A287A8M3	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1TVW4_PIG	UniProtKB/TrEMBL
	A0A4X1TW70	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0QRD8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1VW84	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1XXU2	ENTREZGENE, UniProtKB/TrEMBL
	I3LQI1_PIG	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message