PRTN3 (proteinase 3) - Rat Genome Database

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Gene: PRTN3 (proteinase 3) Sus scrofa
Analyze
Symbol: PRTN3
Name: proteinase 3
RGD ID: 14086959
Description: ENCODES a protein that exhibits enzyme binding (inferred); serine-type endopeptidase activity (inferred); serine-type peptidase activity (inferred); INVOLVED IN positive regulation of GTPase activity (ortholog); ASSOCIATED WITH cerebral creatine deficiency syndrome (ortholog); chronic myeloid leukemia (ortholog); cyclic hematopoiesis (ortholog); FOUND IN azurophil granule lumen (inferred); cytosol (inferred); intracellular membrane-bounded organelle (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: myeloblastin
RGD Orthologs
Human
Mouse
Rat
Bonobo
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl277,520,314 - 77,523,563 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1277,520,314 - 77,526,303 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2277,472,358 - 77,477,327 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PRTN3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl277,520,314 - 77,523,563 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1277,520,314 - 77,526,303 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2277,472,358 - 77,477,327 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PRTN3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3819840,999 - 848,175 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl19840,999 - 848,175 (+)EnsemblGRCh38hg38GRCh38
GRCh3719840,999 - 848,175 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3619791,985 - 799,175 (+)NCBINCBI36Build 36hg18NCBI36
Build 3419791,964 - 799,051NCBI
Celera19766,135 - 773,326 (+)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef19610,181 - 617,038 (+)NCBIHuRef
CHM1_119840,583 - 847,665 (+)NCBICHM1_1
T2T-CHM13v2.019796,963 - 804,283 (+)NCBIT2T-CHM13v2.0
Prtn3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391079,715,499 - 79,719,008 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1079,710,310 - 79,719,008 (+)EnsemblGRCm39 Ensembl
GRCm381079,879,667 - 79,883,174 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1079,874,476 - 79,883,174 (+)EnsemblGRCm38mm10GRCm38
MGSCv371079,342,412 - 79,345,919 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361079,282,796 - 79,286,303 (+)NCBIMGSCv36mm8
Celera1080,894,480 - 80,897,987 (+)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
Prtn3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8710,472,750 - 10,482,037 (-)NCBIGRCr8
mRatBN7.279,822,123 - 9,831,300 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl79,822,122 - 9,831,944 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx712,702,828 - 12,706,274 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0714,580,909 - 14,584,355 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0712,440,584 - 12,444,030 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0712,643,712 - 12,646,951 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl712,643,516 - 12,646,960 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0712,813,238 - 12,822,399 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4711,334,722 - 11,338,559 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1711,334,722 - 11,338,559 (-)NCBI
Celera77,997,078 - 8,000,317 (-)NCBICelera
Cytogenetic Map7q11NCBI
PRTN3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2205,171,167 - 5,180,414 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1194,409,659 - 4,418,867 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v019283,314 - 291,504 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.119810,237 - 817,588 (+)NCBIpanpan1.1PanPan1.1panPan2
PRTN3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.16590,193 - 598,829 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660818,318,743 - 8,324,146 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in PRTN3
75 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
4 1 9 3 3 6 5 9 4 1

Sequence


Ensembl Acc Id: ENSSSCT00000014661   ⟹   ENSSSCP00000014266
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl277,520,314 - 77,523,563 (-)Ensembl
RefSeq Acc Id: XM_013994800   ⟹   XP_013850254
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1277,520,314 - 77,526,303 (-)NCBI
Sequence:
RefSeq Acc Id: XP_013850254   ⟸   XM_013994800
- UniProtKB: F1S6S9 (UniProtKB/TrEMBL),   A0A8D0VTQ5 (UniProtKB/TrEMBL),   A0A4X1VWD0 (UniProtKB/TrEMBL),   A0A8D1FI46 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000014266   ⟸   ENSSSCT00000014661
Protein Domains
Peptidase S1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000013417 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015060783 UniProtKB/TrEMBL
  ENSSSCG00025007679 UniProtKB/TrEMBL
  ENSSSCG00030017302 UniProtKB/TrEMBL
  ENSSSCG00035073964 UniProtKB/TrEMBL
  ENSSSCG00040064580 UniProtKB/TrEMBL
  ENSSSCG00045031178 UniProtKB/TrEMBL
  ENSSSCG00050067202 UniProtKB/TrEMBL
  ENSSSCG00055024536 UniProtKB/TrEMBL
  ENSSSCG00060010092 UniProtKB/TrEMBL
  ENSSSCG00065007107 UniProtKB/TrEMBL
  ENSSSCG00070026801 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000014661 ENTREZGENE
  ENSSSCT00000014661.5 UniProtKB/TrEMBL
  ENSSSCT00015081203.1 UniProtKB/TrEMBL
  ENSSSCT00025010201.1 UniProtKB/TrEMBL
  ENSSSCT00030023917.1 UniProtKB/TrEMBL
  ENSSSCT00035100317.1 UniProtKB/TrEMBL
  ENSSSCT00040088184.1 UniProtKB/TrEMBL
  ENSSSCT00045053144.1 UniProtKB/TrEMBL
  ENSSSCT00050091639.1 UniProtKB/TrEMBL
  ENSSSCT00055048360.1 UniProtKB/TrEMBL
  ENSSSCT00060013072.1 UniProtKB/TrEMBL
  ENSSSCT00065009523.1 UniProtKB/TrEMBL
  ENSSSCT00070053757.1 UniProtKB/TrEMBL
Gene3D-CATH 2.40.10.10 UniProtKB/TrEMBL
InterPro Peptidase_S1_Elastase_sf UniProtKB/TrEMBL
  Peptidase_S1_PA UniProtKB/TrEMBL
  Peptidase_S1_PA_chymotrypsin UniProtKB/TrEMBL
  Peptidase_S1A UniProtKB/TrEMBL
  Trypsin_dom UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/TrEMBL
KEGG Report ssc:106509464 UniProtKB/TrEMBL
NCBI Gene PRTN3 ENTREZGENE
PANTHER CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBER UniProtKB/TrEMBL
  MYELOBLASTIN UniProtKB/TrEMBL
Pfam Trypsin UniProtKB/TrEMBL
PRINTS CHYMOTRYPSIN UniProtKB/TrEMBL
PROSITE TRYPSIN_DOM UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/TrEMBL
SMART Tryp_SPc UniProtKB/TrEMBL
Superfamily-SCOP SSF50494 UniProtKB/TrEMBL
UniProt A0A4X1VWD0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0VTQ5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1FI46 ENTREZGENE, UniProtKB/TrEMBL
  F1S6S9 ENTREZGENE
UniProt Secondary F1S6S9 UniProtKB/TrEMBL
VGNC ID VGNC:91889 ENTREZGENE