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Gene: CCT5 (chaperonin containing TCP1 subunit 5) Sus scrofa

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Symbol:

CCT5

Name:

chaperonin containing TCP1 subunit 5

RGD ID:

14080866

Description:

ENCODES a protein that exhibits ATP binding (inferred); ATP hydrolysis activity (inferred); ATP-dependent protein folding chaperone (inferred); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Breast Neoplasms (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell body (inferred); centrosome (inferred); chaperonin-containing T-complex (inferred); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

T-complex protein 1 subunit epsilon

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	72,208,012 - 72,223,114 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	72,211,452 - 72,223,202 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Animal Disease Models (ISO)

Breast Neoplasms (ISO)

Chemical and Drug Induced Liver Injury (ISO)

COVID-19 (ISO)

Hereditary Sensory Neuropathy with Spastic Paraplegia, Autosomal Recessive (ISO)

hereditary spastic paraplegia (ISO)

human immunodeficiency virus infectious disease (ISO)

lung adenocarcinoma (ISO)

motor peripheral neuropathy (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

binding of sperm to zona pellucida (IEA,ISO)

chaperone mediated protein folding independent of cofactor (IEA)

chaperone-mediated protein folding (IEA)

positive regulation of protein localization to Cajal body (ISO)

positive regulation of telomerase RNA localization to Cajal body (ISO)

positive regulation of telomere maintenance via telomerase (IEA,ISO)

protein folding (IBA,IEA)

protein stabilization (IEA)

response to virus (IEA)

Cellular Component

cell body (IEA)

centrosome (IEA)

chaperonin-containing T-complex (IBA,IEA)

cytoplasm (IEA)

microtubule (IEA)

Molecular Function

ATP binding (IEA)

ATP hydrolysis activity (IEA)

ATP-dependent protein folding chaperone (IEA)

beta-tubulin binding (IEA)

G-protein beta-subunit binding (IEA)

mRNA 3'-UTR binding (IEA)

mRNA 5'-UTR binding (IEA)

protein binding (ISO)

protein folding chaperone (IEA)

unfolded protein binding (IBA,IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

CCT5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	72,208,012 - 72,223,114 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	72,211,452 - 72,223,202 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

CCT5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	10,249,921 - 10,266,412 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	10,249,929 - 10,266,389 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	10,250,033 - 10,266,524 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	10,303,282 - 10,319,501 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	10,303,281 - 10,319,500	NCBI
Celera	5	10,290,174 - 10,306,401 (+)	NCBI		Celera
Cytogenetic Map	5	p15.2	NCBI
HuRef	5	10,236,593 - 10,252,821 (+)	NCBI		HuRef
CHM1_1	5	10,250,148 - 10,266,375 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	10,189,222 - 10,205,724 (+)	NCBI		T2T-CHM13v2.0

Cct5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	31,590,946 - 31,601,992 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	31,590,946 - 31,601,950 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	31,590,800 - 31,601,846 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	31,590,800 - 31,601,804 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	31,520,639 - 31,531,559 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	31,535,473 - 31,546,393 (-)	NCBI		MGSCv36	mm8
Celera	15	32,284,699 - 32,295,619 (-)	NCBI		Celera
Cytogenetic Map	15	B2	NCBI
cM Map	15	13.02	NCBI

Cct5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	84,302,621 - 84,313,773 (-)	NCBI		GRCr8
mRatBN7.2	2	82,591,750 - 82,602,903 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	82,590,630 - 82,602,930 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	89,634,005 - 89,645,161 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	87,755,580 - 87,766,736 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	82,811,868 - 82,823,024 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	84,667,578 - 84,678,730 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	84,667,633 - 84,678,790 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	104,340,314 - 104,351,466 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	83,681,785 - 83,692,937 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	83,626,748 - 83,637,899 (-)	NCBI
Celera	2	78,115,574 - 78,126,621 (-)	NCBI		Celera
Cytogenetic Map	2	q23	NCBI

Cct5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955426	131,871 - 144,354 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955426	132,106 - 144,251 (+)	NCBI	ChiLan1.0	ChiLan1.0

CCT5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	10,494,737 - 10,509,640 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	8,648,343 - 8,663,246 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	10,565,911 - 10,580,808 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	10,424,157 - 10,440,613 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	10,424,157 - 10,440,613 (+)	Ensembl	panpan1.1		panPan2

CCT5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	4,035,851 - 4,049,131 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	4,035,857 - 4,049,244 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	8,538,451 - 8,551,673 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	3,938,380 - 3,951,603 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	3,938,476 - 3,951,486 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	3,990,220 - 4,003,422 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	3,969,548 - 3,982,775 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	4,200,135 - 4,213,334 (-)	NCBI		UU_Cfam_GSD_1.0

Cct5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	237,034,724 - 237,047,654 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936643	2,354,799 - 2,368,048 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936643	2,354,799 - 2,368,048 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCT5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	9,787,093 - 9,802,892 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	9,787,101 - 9,805,852 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666064	18,741,362 - 18,757,404 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cct5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624751	7,615,007 - 7,630,606 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624751	7,615,098 - 7,628,985 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CCT5
463 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001278779	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021076565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK236321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK239563	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK391919	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK396048	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK397238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01041688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JX316755	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000022242 ⟹ ENSSSCP00000026564

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	72,208,012 - 72,223,114 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000084512 ⟹ ENSSSCP00000072046

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	72,208,012 - 72,223,114 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000087752 ⟹ ENSSSCP00000062309

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	72,208,012 - 72,223,114 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000096839 ⟹ ENSSSCP00000077946

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	16	72,211,459 - 72,223,107 (-)	Ensembl

RefSeq Acc Id:

NM_001278779 ⟹ NP_001265708

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	16	72,211,469 - 72,223,190 (-)	NCBI

Sequence:

show sequence

GGTGAGAAATAAGTCTCGGGAGGCCTGTGCTGCGCACGCGCGAGCTCTTGGCGCCCTCCCGCGA
GAGGAAAGTACTCTCTCGGTTCCGGAGTGGACACCGCCGGTTGCGGGAGAGAACTCCTGCTGCT
GCCGCACCATGGCGTCCGTGGGGACCCTCGCCTTCGACGAATATGGCCGCCCCTTTCTCATCAT
CAAAGATCAAGACCGCAAGCCTCGTCTTATGGGACTCGAGGCCCTCAAGTCTCACATAATGGCA
GCAAAGGCCGTAGCAAATACAATGAAAACATCACTTGGACCAAATGGGCTTGATAAGATGATGG
TGGATAAGGATGGCGACGTGACTGTGACCAATGACGGTGCCACCATTTTAAGCATGATGGACGT
GGACCATCAGATCGCCAAGCTCATGGTTGAACTGTCCAAATCACAGGATGACGAGATCGGGGAT
GGAACCACAGGAGTGGTCGTCCTGGCCGGTGCCCTGTTGGAAGAAGCTGAGCAGCTGCTGGACC
GAGGCATTCACCCGATCCGGATTGCAGACGGCTACGAGCAGGCTGCCCGCATCGCCATCGAGCA
CCTGGACAAGATCAGCGATAGTGTCCTTGTGGACATGAAGGACACCGAGCCCCTCATCCAGACC
GCCAAGACCACCCTGGGCTCCAAAGTGGTTAACAGCTGTCACCGACAAATGGCCGAGATTGCCG
TGAATGCCGTCCTCACCGTGGCCGACATGCATCGCAGAGACGTTGACTTTGAGCTCATCAAAGT
AGAAGGCAAGGTGGGCGGGAGGCTGGAGGACACCAAGCTGATCAAGGGCGTGATCGTCGACAAG
GACTTCAGTCACCCCCAGATGCCAAAACAAGTGGAAGATGCAAAGATTGCGATTCTCACGTGTC
CATTTGAACCGCCGAAACCAAAGACAAAGCATAAGCTGGATGTGACCTCAGTAGAAGATTACAA
AGCCCTTCAGAAATACGAAAAGGAGAAGTTTGAGGAGATGATTCGGCAGATTAAGGAAACTGGC
GCTAACCTAGCTATCTGCCAATGGGGATTTGGCGATGAAAGCAATCATTTACTTCTTCAGAATA
ACTTGCCTGCGGTTCGTTGGGTTGGAGGCCCTGAAATCGAGTTGATCGCCATCGCCACCGGGGG
GCGCATCGTGCCGCGGTTCTCGGAGCTCACGCCGGAGAAGCTGGGCTTCGCGGGGCTGGTGAAG
GAGATCTCGTTCGGGACGACCAAGGACAAGATGCTGGTCATCGAGCAGTGTAAGAACTCCAGAG
CCGTCACCATCTTCATCAGAGGAGGAAATAAGATGATCATCGAGGAGGCCAAGCGATCCCTTCA
TGACGCTCTGTGTGTCATCCGGAACCTCATCCGCGACAACCGCGTGGTCTACGGCGGCGGCGCT
GCTGAGATCGCCTGCGCCCTGGCGGTCAGCCAGGAGGCAGACAAGTGCCCGACCTTGGAGCAGT
ACGCCATGCGGGCCTTCGCCGACGCGCTGGAGGTCATCCCCATGGCCCTGGCCGAGAACAGCGG
CATGAACCCCATCCAGACGATGACCGAGGTCCGGGCCAGACAGGTGAAGGAGATGAACCCGGCC
CTCGGGATTGACTGTCTGCACAAGGGCACGAATGATATGAAGCAACAACACGTCATAGAAACCT
TGATTGGCAAAAAGCAACAGATCTCCCTCGCGACACAGATGGTGAGAATGATTCTGAAGATTGA
TGACATCCGTAAGCCTGGAGAATCTGAGGAATAGAGCAGATTTAGAGTTACACGTAGGCCTGAG
ATCCACTACTGTGATTAAATAAATGGGTGTTTTCTGATACATCTACAGTTATTTATTGTTACGT
CCTTTTTCAGACAGTGTAGAAGCTATAGAACAGCTGTTTGGTAACCGTAGTTTCACTTGTTCAG
ACATAAAATTGTAGAGATACGGTCTCAGCAGGTTTTTGTATCCATTATATTAAAGCTAACTCTT
TAAACAACTTTTATTTCTGCTCTTAAAATCTAAGAAACGTTGACTGTAACATTCATCCAATGCC
TTAAATGAATGCATTTAAGTTTTTGTGTATATGTTTTTTTAAATGAGCTGAGGAACTTTTTAAC
AGTTTTAAATGTTGAGTTTGTTCTCTAGGTTTACTTTAACATTGAGAGGAAGGTGGGCTTGGTC
CTATTA

hide sequence

RefSeq Acc Id:

XM_021076565 ⟹ XP_020932224

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	16	72,211,452 - 72,223,202 (-)	NCBI

Sequence:

show sequence

AAACTAGTCTCAGGTGAGAAATAAGTCTCGAGCGGCCTGTGCTGCGCACGCGCGAGCTCTTGGC
GCCCTCCCGCGAGAGGAAAGTACTCTCTCGGTTCCGGAGTGGACACCGCCGGTTGCGGGAGAGA
ACTCCTGCTGCTGCCGCACCATGGCGTCCGTGGGGACCCTCGCCTTCGACGAATATGGCCGCCC
TTTTCTCATCATCAAAGATCAAGACCGCAAGTCTCGTCTTATGGGACTCGAGGCCCTCAAGTCT
CACATAATGGCAGCAAAGGCCGTAGCGAATACAATGAAAACATCACTTGGACCAAATGGGCTTG
ATAAGATGATGGTGGATAAGGATGGCGACGTGACTGTGACCAATGACGGTGCCACCATTTTAAG
CATGATGGACGTGGACCATCAGATCGCCAAGCTCATGGTTGAACTGTCCAAATCACAGGATGAC
GAGATCGGGGATGGAACCACAGGAGTGGTCGTCCTGGCCGGTGCCCTGTTGGAAGAAGCTGAGC
AGCTGCTGGACCGAGGCATTCACCCGATCCGGATTGCAGACGGCTACGAGCAGGCTGCCCGCAT
CGCCATCGAGCACCTGGACAAGATCAGCGATAGTGTCCTCGTGGACATGAAGGACACCGAGCCC
CTCATCCAGACCGCCAAGACCACCCTGGGCTCCAAAGTGGTTAACAGCTGTCACCGACAAATGG
CCGAGATTGCCGTGAATGCCGTCCTCACCGTGGCCGACATGCAGCGCAGAGACGTTGACTTTGA
GCTCATCAAAGTAGAAGGCAAGGTGGGCGGGAGGCTGGAGGACACCAAGCTGATCAAGGGCGTG
ATCGTCGACAAGGACTTCAGTCACCCCCAGATGCCAAAAGTGAGTCCGGGTCCTCCGCAGCTCC
GGGCCCTCCCGCCCCTGCCCGCCAGCTCACGCGTCTGTCTTTCTCCACAGCAAGTGGAAGATGC
AAAGATTGCGATTCTCACGTGTCCATTTGAACCGCCGAAACCAAAGACAAAGCATAAGCTGGAT
GTGACCTCAGTAGAAGATTACAAAGCCCTTCAGAAATACGAAAAGGAGAAGTTTGAGGAGATGA
TTCGGCAGATTAAGGAAACTGGCGCTAACCTAGCTATCTGCCAATGGGGATTTGACGATGAAGC
AAATCATTTACTTCTTCAGAATAACTTGCCTGCGGTTCGTTGGGTTGGAGGCCCTGAAATCGAG
TTGATCGCCATCGCCACCGGGGGGCGCATCGTGCCGCGGTTCTCGGAGCTCACGCCGGAGAAGC
TGGGCTTCGCGGGGCTGGTGAAGGAGATCTCGTTCGGGACGACCAAGGACAAGATGCTGGTCAT
CGAGCAGTGTAAGAACTCCAGAGCCGTCACCATCTTCATCAGAGGAGGAAACAAGATGATCATC
GAGGAGGCCAAGCGATCCCTTCATGACGCTCTGTGTGTCATCCGGAACCTCATCCGCGACAACC
GCGTGGTCTACGGCGGCGGCGCTGCTGAGATCGCCTGCGCCCTGGCGGTCAGCCAGGAGGCAGA
CAAGTGCCCGACCTTGGAGCAGTACGCCATGCGGGCCTTCGCCGACGCGCTGGAGGTCATCCCC
ATGGCCCTGGCCGAGAACAGCGGCATGAACCCCATCCAGACGATGACCGAGGTCCGGGCCAGAC
AGGTGAAGGAGATGAACCCGGCCCTCGGGATTGACTGTCTGCACAAGGGCACGAATGATATGAA
GCAACAACATGTCATAGAAACCTTGATTGGCAAAAAGCAACAGATCTCCCTCGCGACACAGATG
GTGAGAATGATTCTGAAGATTGATGACATCCGTAAGCCTGGAGAATCTGAGGAATAGAGCAGAT
TTAGAGTTACACGTAGGCCTGAGATCCACTACTGTGATTAAATAAATGGGTGTTTTCTGATACA
TCTACAGTTATTTATTGTTACGTCCTTTTTCAGACAGTGTAGAAGCTATAGAACAGCTGTTTGG
TAACCGTAGTTTCACTTGTTCAGACATAAAATTGTAGAGATACGGTCTCAGCAGGTTTTTGTAT
CCATTATATTAAAGCTAACTCTTTAAACAACTTTTATTTCTGCTCTTAAAATTTAAGAAACGTT
GACTGTAACATTCATCCAATGCCTTAAATGAATGCGTTTGCGTTCTTGTGTTTTTGTTTTTTTA
AATGAGCTGAGGAACTTTTTAACAGTTTTAAATGTTGAGTTTGTTCTCTAGATTTACTTTAACA
TTGAGAGGAAGGTGGGCTTGGTCCTATTAAATGTATTTAACTGCTG

hide sequence

Protein Sequences


Protein RefSeqs	NP_001265708	(Get FASTA)	NCBI Sequence Viewer
	XP_020932224	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AFR68432	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000026564
	ENSSSCP00000026564.2
	ENSSSCP00000062309
	ENSSSCP00000062309.1
	ENSSSCP00000072046.1
	ENSSSCP00000077946.1
	ENSSSCP00015041529.1
	ENSSSCP00025017991.1
	ENSSSCP00030021017.1
	ENSSSCP00035019166.1
	ENSSSCP00035019167.1
	ENSSSCP00040011084.1
	ENSSSCP00050033456.1
	ENSSSCP00055021484.1
	ENSSSCP00060013415.1
	ENSSSCP00065014593.1
	ENSSSCP00065014596.1

RefSeq Acc Id:	XP_020932224 ⟸ XM_021076565
- Peptide Label:	isoform X1
- UniProtKB:	A0A5G2QVV0 (UniProtKB/TrEMBL), A0A8D1QR27 (UniProtKB/TrEMBL), A0A8D1CTH2 (UniProtKB/TrEMBL), A0A8D0WHC4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASVGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDK DGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGI HPIRIADGYEQAARIAIEHLDKISDSVLVDMKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNA VLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKVSPGPPQLRALPPLP ASSRVCLSPQQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIRQIKET GANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTPEKLGFAGLV KEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGG AAEIACALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEMNP ALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGESEE hide sequence

RefSeq Acc Id:

NP_001265708 ⟸ NM_001278779

- UniProtKB:

L7PBE6 (UniProtKB/TrEMBL), A0A480XNV7 (UniProtKB/TrEMBL), A0A8D0ZN79 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASVGTLAFDEYGRPFLIIKDQDRKPRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDK
DGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGI
HPIRIADGYEQAARIAIEHLDKISDSVLVDMKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNA
VLTVADMHRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFE
PPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIRQIKETGANLAICQWGFGDESNHLLLQNNLP
AVRWVGGPEIELIAIATGGRIVPRFSELTPEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVT
IFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEIACALAVSQEADKCPTLEQYAM
RAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIG
KKQQISLATQMVRMILKIDDIRKPGESEE

hide sequence

Ensembl Acc Id:

ENSSSCP00000072046 ⟸ ENSSSCT00000084512

Ensembl Acc Id:

ENSSSCP00000026564 ⟸ ENSSSCT00000022242

Ensembl Acc Id:

ENSSSCP00000062309 ⟸ ENSSSCT00000087752

Ensembl Acc Id:

ENSSSCP00000077946 ⟸ ENSSSCT00000096839

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000024126	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015073764	UniProtKB/TrEMBL
	ENSSSCG00025030879	UniProtKB/TrEMBL
	ENSSSCG00030033578	UniProtKB/TrEMBL
	ENSSSCG00035036147	UniProtKB/TrEMBL
	ENSSSCG00040019294	UniProtKB/TrEMBL
	ENSSSCG00050057026	UniProtKB/TrEMBL
	ENSSSCG00055013592	UniProtKB/TrEMBL
	ENSSSCG00060023001	UniProtKB/TrEMBL
	ENSSSCG00065026050	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000022242	ENTREZGENE
	ENSSSCT00000022242.3	UniProtKB/TrEMBL
	ENSSSCT00000084512.1	UniProtKB/TrEMBL
	ENSSSCT00000087752	ENTREZGENE
	ENSSSCT00000087752.1	UniProtKB/TrEMBL
	ENSSSCT00000096839.1	UniProtKB/TrEMBL
	ENSSSCT00015100402.1	UniProtKB/TrEMBL
	ENSSSCT00025042270.1	UniProtKB/TrEMBL
	ENSSSCT00030046660.1	UniProtKB/TrEMBL
	ENSSSCT00035047918.1	UniProtKB/TrEMBL
	ENSSSCT00035047920.1	UniProtKB/TrEMBL
	ENSSSCT00040026212.1	UniProtKB/TrEMBL
	ENSSSCT00050077770.1	UniProtKB/TrEMBL
	ENSSSCT00055027023.1	UniProtKB/TrEMBL
	ENSSSCT00060031248.1	UniProtKB/TrEMBL
	ENSSSCT00065034991.1	UniProtKB/TrEMBL
	ENSSSCT00065034996.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.560.10	UniProtKB/TrEMBL
	3.30.260.10	UniProtKB/TrEMBL
	3.50.7.10	UniProtKB/TrEMBL
InterPro	Chap_CCT_epsi	UniProtKB/TrEMBL
	Chaperone_TCP-1	UniProtKB/TrEMBL
	Chaperonin_TCP-1_CS	UniProtKB/TrEMBL
	Cpn60/TCP-1	UniProtKB/TrEMBL
	GroEL-like_apical_dom_sf	UniProtKB/TrEMBL
	GROEL-like_equatorial_sf	UniProtKB/TrEMBL
	TCP-1-like_intermed_sf	UniProtKB/TrEMBL
	TCP-1_chaperonin	UniProtKB/TrEMBL
	thermosome_alpha	UniProtKB/TrEMBL
KEGG Report	ssc:100627652	UniProtKB/TrEMBL
NCBI Gene	CCT5	ENTREZGENE
PANTHER	PTHR11353	UniProtKB/TrEMBL
Pfam	Cpn60_TCP1	UniProtKB/TrEMBL
PRINTS	TCOMPLEXTCP1	UniProtKB/TrEMBL
PROSITE	TCP1_1	UniProtKB/TrEMBL
	TCP1_2	UniProtKB/TrEMBL
	TCP1_3	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48592	UniProtKB/TrEMBL
	SSF52029	UniProtKB/TrEMBL
	SSF54849	UniProtKB/TrEMBL
UniProt	A0A480XNV7	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1TK46_PIG	UniProtKB/TrEMBL
	A0A5G2QVV0	ENTREZGENE
	A0A8D0WHC4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0ZN79	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1CTH2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1QR27	ENTREZGENE, UniProtKB/TrEMBL
	A0A8W4FGE3_PIG	UniProtKB/TrEMBL
	I3LR32_PIG	UniProtKB/TrEMBL
	L7PBE6	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A4X1TPH4	UniProtKB/TrEMBL
	A0A5G2QVV0	UniProtKB/TrEMBL
	A0A5G2R4N8	UniProtKB/TrEMBL
VGNC ID	VGNC:86383	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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