OIP5 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 1 | 130,036,480 - 130,047,041 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 130,036,478 - 130,054,058 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 145,057,619 - 145,065,691 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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OIP5 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 15 | 41,309,273 - 41,332,591 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 41,309,273 - 41,332,591 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 15 | 41,601,471 - 41,624,789 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 15 | 39,388,758 - 39,412,111 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 15 | 39,388,759 - 39,412,111 | NCBI | | | | | Celera | 15 | 18,369,443 - 18,392,796 (-) | NCBI | | Celera | | | Cytogenetic Map | 15 | q15.1 | NCBI | | | | | HuRef | 15 | 18,450,035 - 18,473,264 (-) | NCBI | | HuRef | | | CHM1_1 | 15 | 41,719,576 - 41,742,481 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 39,115,437 - 39,138,755 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Oip5 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 119,440,013 - 119,448,986 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 119,439,993 - 119,448,950 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 119,609,532 - 119,618,505 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 119,609,512 - 119,618,469 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 119,435,268 - 119,444,241 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 119,435,268 - 119,444,241 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 120,763,329 - 120,772,134 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | E5 | NCBI | | | | | cM Map | 2 | 59.97 | NCBI | | | | |
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Oip5 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 127,047,559 - 127,057,043 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 106,593,746 - 106,603,281 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 106,593,760 - 106,603,250 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 110,271,202 - 110,280,663 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 118,866,747 - 118,876,208 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 116,527,136 - 116,536,597 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 111,413,662 - 111,422,320 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 111,416,536 - 111,422,203 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 117,962,273 - 117,970,788 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 106,124,769 - 106,134,136 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 3 | 105,506,665 - 105,515,085 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q35 | NCBI | | | | |
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Oip5 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955416 | 8,168,319 - 8,179,408 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955416 | 8,168,143 - 8,178,459 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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OIP5 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 16 | 30,550,470 - 30,573,940 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 15 | 34,701,061 - 34,725,232 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 15 | 20,250,339 - 20,273,856 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 15 | 38,494,534 - 38,517,304 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 15 | 38,494,534 - 38,517,300 (-) | Ensembl | panpan1.1 | | panPan2 | |
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OIP5 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 30 | 8,377,407 - 8,396,222 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 30 | 8,381,395 - 8,396,096 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 30 | 8,437,465 - 8,455,625 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 30 | 8,512,598 - 8,530,805 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 30 | 8,515,075 - 8,530,717 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 30 | 8,433,103 - 8,452,262 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 30 | 8,541,602 - 8,559,792 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 30 | 8,672,914 - 8,691,126 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Oip5 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 86,844,351 - 86,857,626 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936471 | 4,692,099 - 4,705,984 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936471 | 4,692,482 - 4,705,643 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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OIP5 (Chlorocebus sabaeus - green monkey) |
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Oip5 (Heterocephalus glaber - naked mole-rat) |
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