CAPN1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 2 | 6,997,985 - 7,022,684 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 6,997,513 - 7,024,410 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 6,129,549 - 6,155,985 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CAPN1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 65,181,373 - 65,212,006 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 65,180,566 - 65,212,006 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 64,948,844 - 64,979,477 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 64,705,919 - 64,736,052 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 64,705,918 - 64,736,052 | NCBI | | | | | Celera | 11 | 62,275,660 - 62,305,793 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q13.1 | NCBI | | | | | HuRef | 11 | 61,275,919 - 61,306,719 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 64,832,312 - 64,863,095 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 65,174,678 - 65,205,290 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Capn1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 19 | 6,038,573 - 6,065,855 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 19 | 6,038,573 - 6,065,927 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 19 | 5,988,545 - 6,015,825 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 19 | 5,988,545 - 6,015,897 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 19 | 5,988,545 - 6,015,825 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 19 | 5,988,545 - 6,015,151 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 19 | 5,858,975 - 5,885,371 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | A | NCBI | | | | | cM Map | 19 | 4.34 | NCBI | | | | |
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Capn1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 212,705,219 - 212,736,134 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 203,275,912 - 203,300,848 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 203,277,344 - 203,300,177 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 211,629,235 - 211,653,778 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 218,721,298 - 218,745,531 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 211,412,355 - 211,436,597 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 221,346,081 - 221,370,965 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 221,346,066 - 221,370,322 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 228,280,716 - 228,306,187 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 208,620,286 - 208,645,007 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 208,773,739 - 208,798,460 (-) | NCBI | | | | | Celera | 1 | 200,809,826 - 200,833,901 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q43 | NCBI | | | | |
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Capn1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955422 | 20,004,426 - 20,025,708 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 20,006,448 - 20,026,984 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CAPN1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 66,416,231 - 66,447,116 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 67,459,271 - 67,490,086 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 60,545,837 - 60,576,631 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 63,884,451 - 63,916,731 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 63,886,015 - 63,916,021 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CAPN1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 18 | 51,983,266 - 52,010,831 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 18 | 51,983,824 - 52,010,757 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 50,591,530 - 50,619,992 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 53,024,769 - 53,053,236 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 18 | 52,941,097 - 53,053,224 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 18 | 52,121,242 - 52,149,446 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 51,694,854 - 51,723,087 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 52,489,182 - 52,517,646 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Capn1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 7,736,614 - 7,759,589 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936599 | 4,178,901 - 4,201,052 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936599 | 4,178,963 - 4,201,037 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CAPN1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 1 | 9,014,087 - 9,050,389 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 9,014,084 - 9,049,804 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 106,399,098 - 106,431,434 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Capn1 (Heterocephalus glaber - naked mole-rat) |
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