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Gene: KCNH6 (potassium voltage-gated channel subfamily H member 6) Sus scrofa

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Symbol:

KCNH6

Name:

potassium voltage-gated channel subfamily H member 6

RGD ID:

13959767

Description:

ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); ASSOCIATED WITH glucose metabolism disease (ortholog); FOUND IN membrane (inferred); monoatomic ion channel complex (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

potassium voltage-gated channel, subfamily H (eag-related), member 6

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	15,353,867 - 15,374,858 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	15,352,765 - 15,374,763 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	15,340,202 - 15,361,582 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

glucose metabolism disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

membrane repolarization during cardiac muscle cell action potential (IBA)

monoatomic ion transmembrane transport (IEA)

monoatomic ion transport (IEA)

potassium ion transmembrane transport (IBA,IEA)

potassium ion transport (IEA,ISO)

regulation of heart rate by cardiac conduction (IBA)

regulation of ventricular cardiac muscle cell membrane repolarization (IBA)

transmembrane transport (IEA)

Cellular Component

membrane (IEA)

monoatomic ion channel complex (IEA)

plasma membrane (IBA,IEA)

Molecular Function

inward rectifier potassium channel activity (IBA,ISO)

monoatomic ion channel activity (IEA)

potassium channel activity (IEA)

protein-containing complex binding (ISO)

voltage-gated potassium channel activity (IEA,ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

KCNH6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	15,353,867 - 15,374,858 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	15,352,765 - 15,374,763 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	15,340,202 - 15,361,582 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KCNH6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	63,523,358 - 63,548,992 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	63,523,334 - 63,548,977 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	61,600,719 - 61,626,353 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	58,954,427 - 58,980,070 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	58,954,426 - 58,980,070	NCBI
Celera	17	55,988,522 - 56,014,428 (+)	NCBI		Celera
Cytogenetic Map	17	q23.3	NCBI
HuRef	17	56,966,852 - 56,992,787 (+)	NCBI		HuRef
CHM1_1	17	61,664,820 - 61,690,751 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	64,393,673 - 64,419,606 (+)	NCBI		T2T-CHM13v2.0

Kcnh6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	105,898,871 - 105,926,421 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	105,898,950 - 105,925,375 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	106,008,044 - 106,035,595 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	106,008,124 - 106,034,549 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	105,869,517 - 105,895,378 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	105,824,293 - 105,850,154 (+)	NCBI		MGSCv36	mm8
Celera	11	117,739,753 - 117,760,293 (+)	NCBI		Celera
Cytogenetic Map	11	E1	NCBI
cM Map	11	68.87	NCBI

Kcnh6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	91,449,025 - 91,471,012 (+)	NCBI		GRCr8
mRatBN7.2	10	90,949,240 - 90,970,746 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	90,949,846 - 90,970,701 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	96,003,974 - 96,025,091 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	95,467,143 - 95,488,263 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	90,878,334 - 90,899,206 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	94,207,336 - 94,228,236 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	94,207,314 - 94,228,236 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	93,958,627 - 93,979,152 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	95,400,862 - 95,421,678 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	95,421,300 - 95,436,048 (+)	NCBI
Celera	10	89,628,057 - 89,648,511 (+)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

Kcnh6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955478	8,243,949 - 8,263,336 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955478	8,242,953 - 8,263,369 (-)	NCBI	ChiLan1.0	ChiLan1.0

KCNH6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	79,694,849 - 79,720,406 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	84,512,403 - 84,537,957 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	57,603,039 - 57,626,964 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	62,749,240 - 62,772,544 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	62,749,216 - 62,772,544 (+)	Ensembl	panpan1.1		panPan2

KCNH6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	11,538,506 - 11,559,303 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	11,538,205 - 11,559,319 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	12,498,958 - 12,519,775 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	13,201,806 - 13,222,832 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	13,201,609 - 13,222,833 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	12,146,396 - 12,167,428 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	15,364,422 - 15,385,338 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	15,367,399 - 15,388,227 (-)	NCBI		UU_Cfam_GSD_1.0

Kcnh6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	14,974,734 - 14,996,783 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936541	4,197,751 - 4,220,076 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936541	4,197,826 - 4,219,864 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KCNH6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	57,733,032 - 57,759,292 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	57,735,861 - 57,758,421 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	28,349,032 - 28,372,393 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kcnh6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624849	1,043,045 - 1,062,891 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624849	1,043,045 - 1,063,371 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in KCNH6
756 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	ectoderm	endocrine system	mesenchyme	nervous system	renal system	reproductive system
1	5	3	1	5	1	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003131296	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU929939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000029983 ⟹ ENSSSCP00000020773

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	15,353,867 - 15,373,694 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000076956 ⟹ ENSSSCP00000070657

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	15,354,416 - 15,374,770 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000086864 ⟹ ENSSSCP00000061478

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	15,354,416 - 15,374,858 (-)	Ensembl

RefSeq Acc Id:

XM_003131296 ⟹ XP_003131344

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	15,352,765 - 15,374,763 (-)	NCBI

Sequence:

show sequence

GGCGCGGTGAGCGGCCAGCCCGGGAGGGCGCCGGGGAGAGCAGCGGAGGAGAGACACAGGCGGG
GAGCGGAGCCCCGCGGCCCTCCCCGGGGGCGGCACCCACCCGGAGCCGGACTCCGCTGAGCCCG
AGGACAGGAGGACACGCAGGGAGCCGGGGCGCTGGTGGCTACCGGCAGAGGCCTCGGCGGCAAG
ATGCCGGTTCGCAGGGGACACGTCGCGCCCCAAAACACTTACCTGGACACCATCATCCGCAAGT
TCGAGGGCCAAAGTCGGAAGTTCCTGATTGCCAATGCTCAGATGGAGAATTGCGCCATCATTTA
CTGCAACGACGGCTTCTGTGAACTCTTCGGCTACTCCCGAGTGGAAGTGATGCAGAGACCGTGT
ACCTGTGACTTCCTTACAGGCCCCAACACCCCACGCAGTGCCATGTCCCGCCTGGCACAGGCCC
TGCTGGGGGCTGAGGAGTGCAAGGTGGACATCCTCTACTACCGAAAGGATGCCTCCAGCTTCCG
CTGCCTGGTGGACGTGGTGCCCGTGAAGAACGAGGATGGGGCCGTCATCATGTTCATCCTCAAC
TTTGAGGACCTGGCCCAGCTCCTGGCCAAGAGAGGGAGCCGCAGCCTGTCCCAGCGCCTGCTGT
CCCCGAGCTTCCTGGGCTCTGAGGGCTCTCACGGCAGGCCGGGTACGCAGGGACCTGGCCCGGG
CAGGGTCAAGTACAGGACTATCAGCCAGATCCCGCAGTTCACGCTCAACTTTGTGGAATTCAAC
CTGGAGAAGCACCGCTCGGGCTCCACCACGGAGATCGAGATCATCGCGCCCCACAAGGTGGTGG
AGCGGACCCAGAACGTCACCGAGAAGGTCACCCAGGTCCTGTCCCTGGGGGCGGACGTGCTGCC
TGAGTACAAGCTGCAGGCGCCGCGCATCCACCGTGGGACCCTCCTGCACTACAGCCCCTTCAAG
GCCGTGTGGGACTGGCTCATCCTGCTGCTGGTCATCTACACCGCCGTCTTCACGCCCTACTCGG
CCGCCTTCCTGCTCAGCGACCAGGACGAGTCTCGGCGTGGGGACTGCGGCTACACCTGCAGCCC
GCTCACCGTGGTGGACCTCATCGTGGACATCATGTTCGTCGTGGACATTGTCATCAACTTCCGC
ACCACGTACGTCAACACCAACGACGAGGTGGTCAGCCACCCCCGCCGCATCGCCGTCCACTACT
TCAAGGGCTGGTTCCTCATCGACATGGTGGCCGCCATCCCCTTCGACCTGCTCATCTTCCGCAC
CGGCTCCGATGAGACCACAACCCTAATCGGGCTGCTGAAGACAGCAAGGCTGCTGCGGCTGGTG
CGGGTGGCTCGGAAGCTGGACCGCTACTCGGAGTACGGGGCAGCTGTGCTCTTCCTGCTCATGT
GCACCTTTGCGCTCATCGCGCACTGGCTGGCCTGCATCTGGTACGCCATCGGCAACGTGGAGCG
GCCCTACCTGGAGCCCAAGATCGGCTGGCTGGACAGCCTGGGCGCACAACTCGGCAAGCGCTAC
AATGGCAGTGACCCAGCGTCGGGCCCCTCGGTGCAGGACAAGTATGTCACAGCCCTCTACTTCA
CCTTCAGCAGCCTTACCAGCGTGGGCTTCGGCAACGTCTCGCCCAACACCAACTCTGAAAAGGT
CTTCTCCATCTGCGTCATGCTCATCGGCTCCCTCATGTACGCCAGCATCTTTGGCAACGTGTCC
GCCATCATCCAGCGCCTGTACTCGGGCACGGCGCGCTACCACACCCAGATGCTGCGAGTCAAGG
AGTTCATCCGCTTCCACCAGATCCCCAACCCGCTGCGGCAGCGCCTGGAAGAGTACTTCCAGCA
CGCCTGGTCCTACACCAACGGCATCGACATGAACGCGGTGCTGAAGGGCTTCCCCGAGTGCCTG
CAGGCCGACATCTGCCTGCACCTGCACCGCGCGCTGCTGCAGCACTGCCCGGCCTTCCACGGCG
CCAGCAAGGGCTGCCTCCGCGCGCTCGCCGTCAAGTTCAAGACGACGCACGCGCCGCCCGGGGA
CACGCTGGTGCACCTCGGCGACGTGCTCTCCACACTCTACTTCATCTCCCGCGGCTCCATCGAG
ATCCTGCGCGACGATGTGGTGGTGGCCATCCTAGGGAAGAATGACATCTTTGGGGAGCCTGTTA
GCCTCCACGCCCGGCCGGGCAAGTCCAGTGCAGACGTACGGGCCCTGACCTACTGTGACCTGCA
CAAGATCCAGCGGGCAGACCTGCTGGAGGTGCTGGACATGTACCCCGCCTTCGCAGACAGCTTC
TGGAGTAAGCTGGAAGTCACCTTCAACCTGCGGGACGCAGGCGGAGGTCTCCAGTCATCACCCC
AGCAGGCTTCAGGCAGCCAGGACCACCAAGGCTTCTTCCTCAGTGACAACCAGTCAGCCGGCCC
CCTGAAGCTGGGGCCCCAGCCCCCCTCCCAGGGCTACAACCTTTTGGGTCCTGGAAGCCAGACC
TCTTTGGGGGCAGGACCTCGTACTCCAGGGCACCCAGGTGCAGCCCCTTCCCTGAGCATCTCAG
ATGCATCTGGCCTCTGGCCTGAGTTGCTGCAGCAAGTGCCCCCAAGGCCAAGTCACAGCCCCCC
AAACCCTCAAGGAGACCCAGACTGCTGGCCTCGGGAGCTAGGTTCCAGGCTAGAGCAGCTCCAG
GCCCAGATGAACAGGCTGGAGTCCCGGATGTCCGCAGACCTCAGCCGCATCCTGCAGCTCCTTC
AGCAGCCCTTGCCCCAGGACCACACTGGCTACATTCTGGGAGCCCCTGCCTCCAATGACCTGGC
CTTGTTTCCTGTGAGCTCAGTGACTCAGAGGCCAGGAGCTGGACTACCCCAGGGCGATGTGCCC
CCTGCACAGACCCCAAGCTATGGTGACTCAGATGAATGGAGCCTGAAGCGCAGCAACTCCTCCT
CCAAGCTGCCCCCTCTGGCTATGGACATAGACAAAACTCTGACACTGTGTTCTGAAGAGGAGCA
GCCTGAGGGGCTCCTGTCACCCCTGGCCTCCCCTCTGCATCCCCTGGAGGTACAGGGACTCGTC
TGTGGCCCCCGCTTTCCCTCCCTCCCTGAACACCTCAGCTCTGTCCCCAAACAGCTGGAGGTCC
AGAGACATGGCTCAGATCCTGGATTTGCAGGGAATTAGAGCCACTGAACCCCAAGATAAAAGAC
GCCATGAAGGAACTGAAGGTGGGTGAGGTGACAGTTAAGGATTTAGGGACGCCTCTGAGAACCA
TTCACCTAGAGTAGCTACAAATGGCCAGTCCAGGTGACCCAGGATGGCATGGATGAAGAGGCTC
AGGACTTTTCTGACACCCCCCCCGCCCCCCCGCCACCGCCGGGGTTGTTTAGGTGGCCGGCCTG
GTGGGGGTGGGTGAGCTTAGATGTGGAGGTAGCTTATGGGACAGAGGGGCCTGTGAAGAAAGGA
GACACTTCTGATCTTCTGTGTGACGGCCTTGCTCTGTGCTGGGTACAGTCACCTCCCCGCTCAG
AACTCTCCCCACCACACAGCCCAGCCCCCATGGCTGGTCAGGACCTCCTGCTGAGAGCCTGTGA
ACCAGCTGGAGGTGAAAGTGTCCTCTGCAGAGGACTCAGCAGGGCACAGAGCTCCAGCTCCCAG
CCACTCTGCCCCTGATGGTTCTGTGATGACCTTGGGACCTAGTGGGCAGTGCCGCATCTCACAG
CTAATAAAGTCTGCACATTTCATGTCGGGCTGGGCGTGTAACGTTCCTGAGGGTCCTTGATTGG
GCTGTAACTCTGCCAGCTGTGGTCGCCTCCAAGTCCTTCTCCCAAGGAGCTGTGTGTTGGGGAC
CTGAATGTGGCTGCGGGGGGCTTTTAGGCACACTGGGGTGAAGGGAAGCAGAGCAGTGCCGGCT
TGGTGGCCATAGGGAATCGTGACCACAGCCAGCACTTTTAAGGCACTCACTCTGTGTTTGTGGG
CACCAGGCTGACTGTGCTGCAGATACGAGTTCATCAACTCTTTATAACAACCTTACAGGGCCGG
TATTATCATCCCCAGTTTAGAGGTGATGAATCTGAAGCAGAGAGAGACTAAGAACTTTACCCAA
GCAAGAGGGGGAACTTTTTGGGGGTTGTTCTGTTCCTGACCTAATTGCTGATTACATGACTGCG
TCTCAGGTTGTAAAAATATGTACAGTTTCTATGTGTAAATTATACTTTGATTTAAAATAGAGTA
TTTTCCAAAAATATAGGCAAAGGAGACATAATTTCAACCCAGATGGTCTTGTTTGAGAACACAT
GCAGTTAAGTATCCCACTGAAATGGACTGTTGTCAAAAAGTCACTGGTCCTGTCCTTTTTCAGT
ACTCCCTAAAAAAATTTTGAAAATGTATCCCCCAGCCCACATTTTTAGTTAACATCTGAAGTAT
TTTACTGATGTGCTTAAAGGGTTGCAAAGGACATAATTTACAGAGTATTGTAAATATTGACTTT
TTATAACATGTTTAATTTATATTGCTTTATTTCAATCCCAGTAACAGTGATTAAGAAGCCAAAA
TCATTCATTTTAAAAACAGAACAAGCTCTTCTTTAACGTCGTTCCTTTTTTTGTACTCATCATT
TCACTCTATTCCATCCGCAGTTTATCCAACATGTAATTTATTTCCATGCTTGAAAGTCTACTAC
TAATAACCTTATCATATCTACTTGTAACACATATATATAAATTGAAATTTTAAAATTGTTTCTA
ACCTAAGACTTTAAGGGTTACACTTATTAGTACTGAGTTGTTCAAAACAACATAAATATCTCTA
TTTAAATTTATTTATTTATTTATTTTTGGTCTTT

hide sequence

Protein Sequences


Protein RefSeqs	XP_003131344	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000020773.2
	ENSSSCP00000061478
	ENSSSCP00000061478.1
	ENSSSCP00000070657.1
	ENSSSCP00025019493.1
	ENSSSCP00030003707.1
	ENSSSCP00035005424.1
	ENSSSCP00040023941.1
	ENSSSCP00045027706.1
	ENSSSCP00050040292.1
	ENSSSCP00055021833.1
	ENSSSCP00065002762.1

RefSeq Acc Id:

XP_003131344 ⟸ XM_003131296

- UniProtKB:

A0A5G2QHI3 (UniProtKB/TrEMBL), A0A8D0VCH4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPVRRGHVAPQNTYLDTIIRKFEGQSRKFLIANAQMENCAIIYCNDGFCELFGYSRVEVMQRPC
TCDFLTGPNTPRSAMSRLAQALLGAEECKVDILYYRKDASSFRCLVDVVPVKNEDGAVIMFILN
FEDLAQLLAKRGSRSLSQRLLSPSFLGSEGSHGRPGTQGPGPGRVKYRTISQIPQFTLNFVEFN
LEKHRSGSTTEIEIIAPHKVVERTQNVTEKVTQVLSLGADVLPEYKLQAPRIHRGTLLHYSPFK
AVWDWLILLLVIYTAVFTPYSAAFLLSDQDESRRGDCGYTCSPLTVVDLIVDIMFVVDIVINFR
TTYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFDLLIFRTGSDETTTLIGLLKTARLLRLV
RVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNVERPYLEPKIGWLDSLGAQLGKRY
NGSDPASGPSVQDKYVTALYFTFSSLTSVGFGNVSPNTNSEKVFSICVMLIGSLMYASIFGNVS
AIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECL
QADICLHLHRALLQHCPAFHGASKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIE
ILRDDVVVAILGKNDIFGEPVSLHARPGKSSADVRALTYCDLHKIQRADLLEVLDMYPAFADSF
WSKLEVTFNLRDAGGGLQSSPQQASGSQDHQGFFLSDNQSAGPLKLGPQPPSQGYNLLGPGSQT
SLGAGPRTPGHPGAAPSLSISDASGLWPELLQQVPPRPSHSPPNPQGDPDCWPRELGSRLEQLQ
AQMNRLESRMSADLSRILQLLQQPLPQDHTGYILGAPASNDLALFPVSSVTQRPGAGLPQGDVP
PAQTPSYGDSDEWSLKRSNSSSKLPPLAMDIDKTLTLCSEEEQPEGLLSPLASPLHPLEVQGLV
CGPRFPSLPEHLSSVPKQLEVQRHGSDPGFAGN

hide sequence

Ensembl Acc Id:

ENSSSCP00000020773 ⟸ ENSSSCT00000029983

Ensembl Acc Id:

ENSSSCP00000070657 ⟸ ENSSSCT00000076956

Ensembl Acc Id:

ENSSSCP00000061478 ⟸ ENSSSCT00000086864

Protein Domains

Cyclic nucleotide-binding PAS

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000017295	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00025033453	UniProtKB/TrEMBL
	ENSSSCG00030006329	UniProtKB/TrEMBL
	ENSSSCG00035012456	UniProtKB/TrEMBL
	ENSSSCG00040042770	UniProtKB/TrEMBL
	ENSSSCG00045023174	UniProtKB/TrEMBL
	ENSSSCG00050068405	UniProtKB/TrEMBL
	ENSSSCG00055013800	UniProtKB/TrEMBL
	ENSSSCG00065004505	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000029983.2	UniProtKB/TrEMBL
	ENSSSCT00000076956.2	UniProtKB/TrEMBL
	ENSSSCT00000086864	ENTREZGENE
	ENSSSCT00000086864.2	UniProtKB/TrEMBL
	ENSSSCT00025045698.1	UniProtKB/TrEMBL
	ENSSSCT00030008570.1	UniProtKB/TrEMBL
	ENSSSCT00035015756.1	UniProtKB/TrEMBL
	ENSSSCT00040057518.1	UniProtKB/TrEMBL
	ENSSSCT00045039795.1	UniProtKB/TrEMBL
	ENSSSCT00050093364.1	UniProtKB/TrEMBL
	ENSSSCT00055027439.1	UniProtKB/TrEMBL
	ENSSSCT00065006195.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1200.260	UniProtKB/TrEMBL
	1.10.287.70	UniProtKB/TrEMBL
	2.60.120.10	UniProtKB/TrEMBL
	PAS domain	UniProtKB/TrEMBL
InterPro	cNMP-bd-like	UniProtKB/TrEMBL
	cNMP-bd_dom	UniProtKB/TrEMBL
	Ion_trans_dom	UniProtKB/TrEMBL
	K_chnl_volt-dep_EAG/ELK/ERG	UniProtKB/TrEMBL
	K_chnl_volt-dep_ERG	UniProtKB/TrEMBL
	KCNH_channel	UniProtKB/TrEMBL
	PAS	UniProtKB/TrEMBL
	PAS-like_dom_sf	UniProtKB/TrEMBL
	RmlC-like_jellyroll	UniProtKB/TrEMBL
NCBI Gene	KCNH6	ENTREZGENE
PANTHER	PTHR10217:SF468	UniProtKB/TrEMBL
	VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL	UniProtKB/TrEMBL
Pfam	cNMP_binding	UniProtKB/TrEMBL
	Ion_trans	UniProtKB/TrEMBL
	PAS_9	UniProtKB/TrEMBL
PRINTS	EAGCHANLFMLY	UniProtKB/TrEMBL
	ERGCHANNEL	UniProtKB/TrEMBL
PROSITE	CNMP_BINDING_3	UniProtKB/TrEMBL
	PAS	UniProtKB/TrEMBL
SMART	cNMP	UniProtKB/TrEMBL
Superfamily-SCOP	SSF51206	UniProtKB/TrEMBL
	SSF55785	UniProtKB/TrEMBL
	Voltage-gated potassium channels	UniProtKB/TrEMBL
UniProt	A0A5G2QHI3	ENTREZGENE, UniProtKB/TrEMBL
	A0A5G2R2U0_PIG	UniProtKB/TrEMBL
	A0A8D0VCH4	ENTREZGENE, UniProtKB/TrEMBL
	I3L9R0_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:89346	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - MGI