CLDN1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 127,712,777 - 127,730,657 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 127,714,857 - 127,730,628 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 136,971,674 - 136,987,446 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CLDN1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 190,305,707 - 190,322,446 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 190,305,707 - 190,322,446 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 190,023,496 - 190,040,235 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 191,506,187 - 191,522,909 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 191,506,195 - 191,522,917 | NCBI | | | | | Celera | 3 | 188,453,968 - 188,470,713 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q28 | NCBI | | | | | HuRef | 3 | 187,423,222 - 187,439,968 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 189,986,455 - 190,003,201 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 193,121,997 - 193,138,734 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Cldn1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 16 | 26,175,395 - 26,190,589 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 26,175,392 - 26,190,591 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 26,356,645 - 26,371,839 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 26,356,642 - 26,371,841 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 26,356,737 - 26,371,925 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 26,272,000 - 26,287,188 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 26,899,939 - 26,915,115 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | B2 | NCBI | | | | | cM Map | 16 | 18.0 | NCBI | | | | |
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Cldn1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 11 | 87,926,376 - 87,941,533 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 74,421,569 - 74,436,728 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 74,421,569 - 74,436,724 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 11 | 83,230,293 - 83,245,398 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 75,865,333 - 75,880,440 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 74,926,942 - 74,942,078 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 77,815,216 - 77,830,373 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 77,815,181 - 77,830,416 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 82,888,890 - 82,904,926 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 76,473,654 - 76,488,809 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 11 | 76,531,242 - 76,546,394 (+) | NCBI | | | | | Celera | 11 | 73,332,294 - 73,347,451 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q22 | NCBI | | | | |
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Cldn1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955420 | 17,798,974 - 17,815,205 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955420 | 17,798,974 - 17,815,049 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CLDN1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 188,174,529 - 188,191,447 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 188,179,246 - 188,196,102 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 187,328,629 - 187,345,360 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 195,882,239 - 195,898,990 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 195,882,239 - 195,899,248 (-) | Ensembl | panpan1.1 | | panPan2 | |
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CLDN1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 34 | 22,303,058 - 22,319,101 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 34 | 22,303,850 - 22,319,033 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 34 | 26,396,629 - 26,412,654 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 34 | 22,237,734 - 22,253,834 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 34 | 22,238,526 - 22,254,024 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 34 | 22,258,709 - 22,274,790 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 34 | 22,245,945 - 22,262,037 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 34 | 22,487,908 - 22,503,999 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Cldn1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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CLDN1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 15 | 84,518,464 - 84,533,587 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 15 | 84,516,478 - 84,532,969 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 58,103,316 - 58,119,871 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cldn1 (Heterocephalus glaber - naked mole-rat) |
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