ALDH7A1 (aldehyde dehydrogenase 7 family member A1) - Rat Genome Database

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Gene: ALDH7A1 (aldehyde dehydrogenase 7 family member A1) Sus scrofa
Analyze
Symbol: ALDH7A1
Name: aldehyde dehydrogenase 7 family member A1
RGD ID: 13936746
Description: ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (inferred); betaine-aldehyde dehydrogenase (NAD+) activity (inferred); identical protein binding (inferred); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; choline metabolic pathway; glutaric aciduria type I pathway; ASSOCIATED WITH adult-onset autosomal dominant demyelinating leukodystrophy (ortholog); benign neonatal seizures (ortholog); bone disease (ortholog); FOUND IN cytosol (inferred); mitochondrion (inferred); INTERACTS WITH 1,4-dithiothreitol; hydrogen peroxide; L-1,4-dithiothreitol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: alpha-aminoadipic semialdehyde dehydrogenase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2129,662,969 - 129,709,705 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12129,663,226 - 129,709,728 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22134,953,156 - 134,988,290 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (IEA)
mitochondrion  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:30032202  


Genomics

Comparative Map Data
ALDH7A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2129,662,969 - 129,709,705 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12129,663,226 - 129,709,728 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22134,953,156 - 134,988,290 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ALDH7A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385126,541,841 - 126,595,219 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5126,531,200 - 126,595,362 (-)EnsemblGRCh38hg38GRCh38
GRCh375125,877,533 - 125,930,911 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365125,908,344 - 125,958,839 (-)NCBINCBI36Build 36hg18NCBI36
Build 345125,908,347 - 125,958,756NCBI
Cytogenetic Map5q23.2NCBI
HuRef5121,068,235 - 121,122,325 (-)NCBIHuRef
CHM1_15125,309,919 - 125,363,679 (-)NCBICHM1_1
T2T-CHM13v2.05127,058,709 - 127,112,081 (-)NCBIT2T-CHM13v2.0
Aldh7a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391856,657,794 - 56,706,112 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1856,642,759 - 56,706,023 (-)EnsemblGRCm39 Ensembl
GRCm381856,524,722 - 56,572,991 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1856,509,687 - 56,572,951 (-)EnsemblGRCm38mm10GRCm38
MGSCv371856,685,390 - 56,732,593 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361856,651,105 - 56,698,241 (-)NCBIMGSCv36mm8
Celera1857,828,935 - 57,877,977 (-)NCBICelera
Cytogenetic Map18D3NCBI
cM Map1830.55NCBI
Aldh7a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81852,208,035 - 52,240,293 (-)NCBIGRCr8
mRatBN7.21850,003,242 - 50,042,193 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1850,009,934 - 50,042,193 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1852,048,134 - 52,080,362 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01852,756,122 - 52,788,453 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01850,554,002 - 50,586,230 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01851,619,007 - 51,651,267 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1851,619,007 - 51,651,267 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01850,814,203 - 50,846,463 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41852,300,899 - 52,333,149 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11852,346,394 - 52,378,655 (-)NCBI
Celera1848,155,257 - 48,187,477 (-)NCBICelera
Cytogenetic Map18q12.1NCBI
Aldh7a1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555214,364,638 - 4,396,129 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555214,365,075 - 4,396,105 (-)NCBIChiLan1.0ChiLan1.0
ALDH7A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24121,858,390 - 121,910,911 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15119,996,435 - 120,050,338 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05121,946,527 - 122,000,273 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15127,718,978 - 127,771,047 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5127,718,978 - 127,771,047 (-)Ensemblpanpan1.1panPan2
ALDH7A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11115,828,581 - 15,878,556 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1115,815,936 - 15,878,516 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1114,623,590 - 14,671,820 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01116,555,891 - 16,604,274 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1116,489,913 - 16,604,251 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11115,287,402 - 15,335,601 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01115,133,391 - 15,181,763 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01115,729,874 - 15,778,117 (-)NCBIUU_Cfam_GSD_1.0
Aldh7a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213138,385,899 - 138,424,789 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365756,467,340 - 6,506,006 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365756,467,224 - 6,506,052 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ALDH7A1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12329,539,897 - 29,589,004 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603448,486,643 - 48,538,244 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aldh7a1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477415,048,627 - 15,101,856 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477415,048,825 - 15,099,443 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ALDH7A1
2803 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000015567   ⟹   ENSSSCP00000015155
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2129,664,515 - 129,709,660 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000050395   ⟹   ENSSSCP00000048335
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2129,662,969 - 129,709,683 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000054475   ⟹   ENSSSCP00000041970
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2129,662,969 - 129,709,683 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000060817   ⟹   ENSSSCP00000032363
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2129,664,515 - 129,709,682 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000062287   ⟹   ENSSSCP00000038216
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2129,664,515 - 129,709,660 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000074251   ⟹   ENSSSCP00000069774
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2129,667,533 - 129,709,660 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000081054   ⟹   ENSSSCP00000071793
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2129,665,992 - 129,709,660 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000084992   ⟹   ENSSSCP00000073447
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2129,665,992 - 129,709,705 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000087853   ⟹   ENSSSCP00000070306
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2129,665,992 - 129,709,705 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000088501   ⟹   ENSSSCP00000060239
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2129,667,533 - 129,709,660 (-)Ensembl
RefSeq Acc Id: XM_013995069   ⟹   XP_013850523
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12129,663,226 - 129,709,728 (-)NCBI
Sequence:
RefSeq Acc Id: XP_013850523   ⟸   XM_013995069
- UniProtKB: A0A4X1UC50 (UniProtKB/TrEMBL),   A0A287AWM0 (UniProtKB/TrEMBL),   A0A8D0XZ53 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000041970   ⟸   ENSSSCT00000054475
Ensembl Acc Id: ENSSSCP00000015155   ⟸   ENSSSCT00000015567
Ensembl Acc Id: ENSSSCP00000060239   ⟸   ENSSSCT00000088501
Ensembl Acc Id: ENSSSCP00000069774   ⟸   ENSSSCT00000074251
Ensembl Acc Id: ENSSSCP00000048335   ⟸   ENSSSCT00000050395
Ensembl Acc Id: ENSSSCP00000032363   ⟸   ENSSSCT00000060817
Ensembl Acc Id: ENSSSCP00000073447   ⟸   ENSSSCT00000084992
Ensembl Acc Id: ENSSSCP00000038216   ⟸   ENSSSCT00000062287
Ensembl Acc Id: ENSSSCP00000071793   ⟸   ENSSSCT00000081054
Ensembl Acc Id: ENSSSCP00000070306   ⟸   ENSSSCT00000087853
Protein Domains
Aldehyde dehydrogenase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000014247 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00030068791 UniProtKB/TrEMBL
  ENSSSCG00055020339 UniProtKB/TrEMBL
  ENSSSCG00065057843 UniProtKB/TrEMBL
  ENSSSCG00070016503 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000015567.5 UniProtKB/TrEMBL
  ENSSSCT00000050395 ENTREZGENE
  ENSSSCT00000050395.2 UniProtKB/TrEMBL
  ENSSSCT00000054475.3 UniProtKB/TrEMBL
  ENSSSCT00000060817.3 UniProtKB/TrEMBL
  ENSSSCT00000062287.3 UniProtKB/TrEMBL
  ENSSSCT00000074251.2 UniProtKB/TrEMBL
  ENSSSCT00000084992.2 UniProtKB/TrEMBL
  ENSSSCT00000087853.2 UniProtKB/TrEMBL
  ENSSSCT00030097199.1 UniProtKB/TrEMBL
  ENSSSCT00055041419.1 UniProtKB/TrEMBL
  ENSSSCT00055041580.1 UniProtKB/TrEMBL
  ENSSSCT00055041764.1 UniProtKB/TrEMBL
  ENSSSCT00055042100.1 UniProtKB/TrEMBL
  ENSSSCT00055042302.1 UniProtKB/TrEMBL
  ENSSSCT00055042532.1 UniProtKB/TrEMBL
  ENSSSCT00055042824.1 UniProtKB/TrEMBL
  ENSSSCT00065079890.1 UniProtKB/TrEMBL
  ENSSSCT00065079955.1 UniProtKB/TrEMBL
  ENSSSCT00070032869.1 UniProtKB/TrEMBL
  ENSSSCT00070032909.1 UniProtKB/TrEMBL
  ENSSSCT00070032935.1 UniProtKB/TrEMBL
  ENSSSCT00070032959.1 UniProtKB/TrEMBL
  ENSSSCT00070032970.1 UniProtKB/TrEMBL
  ENSSSCT00070032980.1 UniProtKB/TrEMBL
InterPro Ald_DH/histidinol_DH UniProtKB/TrEMBL
  Ald_DH_C UniProtKB/TrEMBL
  Ald_DH_CS_GLU UniProtKB/TrEMBL
  Ald_DH_N UniProtKB/TrEMBL
  Aldehyde_DH_dom UniProtKB/TrEMBL
  ALDH7A1-like UniProtKB/TrEMBL
NCBI Gene ALDH7A1 ENTREZGENE
PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE UniProtKB/TrEMBL
  PTHR43521 UniProtKB/TrEMBL
Pfam Aldedh UniProtKB/TrEMBL
PROSITE ALDEHYDE_DEHYDR_GLU UniProtKB/TrEMBL
Superfamily-SCOP SSF53720 UniProtKB/TrEMBL
UniProt A0A286ZL79_PIG UniProtKB/TrEMBL
  A0A287A399_PIG UniProtKB/TrEMBL
  A0A287ADK3_PIG UniProtKB/TrEMBL
  A0A287AWM0 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1UC50 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1UC96_PIG UniProtKB/TrEMBL
  A0A4X1UG40_PIG UniProtKB/TrEMBL
  A0A4X1UGB2_PIG UniProtKB/TrEMBL
  A0A4X1UGD3_PIG UniProtKB/TrEMBL
  A0A4X1UH18_PIG UniProtKB/TrEMBL
  A0A5G2QZJ5_PIG UniProtKB/TrEMBL
  A0A5G2RFA2_PIG UniProtKB/TrEMBL
  A0A5G2RFH5_PIG UniProtKB/TrEMBL
  A0A8D0XZ53 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1R7T2_PIG UniProtKB/TrEMBL
  A0A8D1RBU9_PIG UniProtKB/TrEMBL
  A0A8D1RD74_PIG UniProtKB/TrEMBL
  A0A8D1RLP4_PIG UniProtKB/TrEMBL
  A0A8D1RMA9_PIG UniProtKB/TrEMBL
  A0A8D1RMP7_PIG UniProtKB/TrEMBL
  A0A8D1RN53_PIG UniProtKB/TrEMBL
  F1RKM1_PIG UniProtKB/TrEMBL
VGNC ID VGNC:85243 ENTREZGENE