FMR1 (Fragile X messenger ribonucleoprotein 1) - Rat Genome Database

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Gene: FMR1 (Fragile X messenger ribonucleoprotein 1) Sus scrofa
Analyze
Symbol: FMR1
Name: Fragile X messenger ribonucleoprotein 1
RGD ID: 13911796
Description: ENCODES a protein that exhibits chromatin binding (ortholog); dynein complex binding (ortholog); microtubule binding (ortholog); INVOLVED IN cellular response to L-glutamate (ortholog); cellular response to potassium ion (ortholog); central nervous system development (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); anxiety disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); Cajal body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: FMRP translational regulator 1; fragile X mental retardation 1; Fragile X mental retardation 1 protein; synaptic functional regulator FMR1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX120,361,367 - 120,399,831 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X120,361,232 - 120,400,282 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X137,792,642 - 137,831,753 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
animal organ development  (IBA)
cellular response to L-glutamate  (ISO)
cellular response to potassium ion  (ISO)
cellular response to virus  (IEA)
central nervous system development  (ISO)
dendritic spine development  (ISO)
detection of mechanical stimulus involved in sensory perception  (ISO)
DNA repair  (IEA)
evoked excitatory postsynaptic potential  (ISO)
excitatory chemical synaptic transmission  (ISO)
glutamate receptor signaling pathway  (ISO)
inhibitory chemical synaptic transmission  (ISO)
intracellular glutamate homeostasis  (ISO)
locomotory exploration behavior  (ISO)
membraneless organelle assembly  (IEA)
miRNA-mediated post-transcriptional gene silencing  (ISO)
modulation by host of viral RNA genome replication  (IEA)
mRNA export from nucleus  (IEA)
mRNA processing  (IEA)
mRNA transport  (IBA,IEA)
negative regulation of cytoplasmic translation  (ISO)
negative regulation of gene expression  (ISO)
negative regulation of long-term synaptic depression  (ISO)
negative regulation of miRNA-mediated gene silencing  (IEA)
negative regulation of neuron apoptotic process  (ISO)
negative regulation of neuron differentiation  (ISO)
negative regulation of protein processing  (ISO)
negative regulation of receptor internalization  (ISO)
negative regulation of synaptic vesicle exocytosis  (ISO)
negative regulation of translation  (IEA)
negative regulation of translational initiation  (ISO)
negative regulation of voltage-gated calcium channel activity  (ISO)
nervous system development  (IEA)
ovarian follicle development  (ISO)
positive regulation of dendritic spine development  (ISO)
positive regulation of filopodium assembly  (ISO)
positive regulation of gene expression  (ISO)
positive regulation of intracellular transport of viral material  (IEA)
positive regulation of long-term neuronal synaptic plasticity  (IBA,ISO)
positive regulation of long-term synaptic depression  (ISO)
positive regulation of long-term synaptic potentiation  (ISO)
positive regulation of miRNA-mediated gene silencing  (IEA)
positive regulation of proteasomal protein catabolic process  (ISO)
positive regulation of protein phosphorylation  (ISO)
positive regulation of receptor internalization  (IEA)
positive regulation of synaptic transmission  (ISO)
positive regulation of translation  (IBA,IEA)
regulation of alternative mRNA splicing, via spliceosome  (IEA)
regulation of dendritic spine development  (IEA)
regulation of filopodium assembly  (IEA)
regulation of mRNA stability  (IBA)
regulation of neuronal action potential  (IEA,ISO)
regulation of neurotransmitter secretion  (ISO)
regulation of translation  (IEA)
regulation of translation at postsynapse, modulating synaptic transmission  (ISO)
regulation of translation at presynapse, modulating synaptic transmission  (IBA)
response to activity  (ISO)
response to cocaine  (ISO)
response to electrical stimulus  (ISO)
response to gonadotropin  (ISO)
response to interleukin-1  (ISO)
response to interleukin-17  (ISO)
response to light stimulus  (ISO)
RNA splicing  (IEA)
social behavior  (ISO)
stress granule assembly  (IEA)
transmission of nerve impulse  (ISO)

References
Additional References at PubMed
PMID:14681463   PMID:30032202  


Genomics

Comparative Map Data
FMR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX120,361,367 - 120,399,831 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X120,361,232 - 120,400,282 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X137,792,642 - 137,831,753 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FMR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X147,911,919 - 147,951,125 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX147,911,919 - 147,951,125 (+)EnsemblGRCh38hg38GRCh38
GRCh37X146,993,437 - 147,032,645 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X146,801,201 - 146,840,303 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X146,699,054 - 146,738,157NCBI
CeleraX147,345,446 - 147,384,585 (+)NCBICelera
Cytogenetic MapXq27.3NCBI
HuRefX135,963,879 - 135,993,282 (+)NCBIHuRef
CHM1_1X146,904,323 - 146,943,501 (+)NCBICHM1_1
T2T-CHM13v2.0X146,176,547 - 146,215,797 (+)NCBIT2T-CHM13v2.0
Fmr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X67,722,144 - 67,761,569 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX67,722,147 - 67,761,569 (+)EnsemblGRCm39 Ensembl
GRCm38X68,678,536 - 68,717,963 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX68,678,541 - 68,717,963 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X65,931,730 - 65,971,138 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X51,835,932 - 51,875,340 (+)NCBIMGSCv36mm8
MGSCv36X64,939,220 - 64,978,628 (+)NCBIMGSCv36mm8
Cytogenetic MapXA7.1NCBI
cM MapX34.83NCBI
Fmr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X152,284,857 - 152,322,686 (+)NCBIGRCr8
mRatBN7.2X147,240,239 - 147,278,057 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX147,240,301 - 147,278,050 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX149,444,285 - 149,482,036 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X152,978,628 - 153,016,381 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X150,519,276 - 150,557,027 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X154,684,924 - 154,722,369 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
RGSC_v3.4X154,756,031 - 154,793,782 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X154,829,463 - 154,867,215 (+)NCBI
Cytogenetic MapXq37NCBI
Fmr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955498566,688 - 595,360 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955498566,741 - 594,837 (+)NCBIChiLan1.0ChiLan1.0
FMR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X147,227,441 - 147,266,218 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X147,231,048 - 147,269,765 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X136,937,889 - 136,976,828 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X147,366,713 - 147,405,327 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX147,365,748 - 147,405,321 (+)Ensemblpanpan1.1panPan2
FMR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X116,249,079 - 116,287,008 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX116,249,142 - 116,321,439 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX102,141,952 - 102,179,858 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X118,308,237 - 118,346,144 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX118,308,224 - 118,346,195 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X115,421,122 - 115,459,027 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X117,632,687 - 117,670,590 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X117,359,050 - 117,396,958 (+)NCBIUU_Cfam_GSD_1.0
Fmr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X114,286,773 - 114,324,847 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365131,289,558 - 1,327,856 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365131,290,038 - 1,327,850 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FMR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X122,635,383 - 122,674,298 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX122,635,439 - 122,674,355 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606560,266,278 - 60,318,872 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fmr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624883645,449 - 682,292 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624883645,524 - 681,705 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in FMR1
324 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_001925732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003360469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003360470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005673954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005673955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005673956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005673957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005673958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005673959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005673960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005673961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021080769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021080770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021080771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021080772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001302745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002340868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK240136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AM746978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU207340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01000794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSSCT00000013914   ⟹   ENSSSCP00000013531
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX120,374,057 - 120,398,546 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000034989   ⟹   ENSSSCP00000030836
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX120,361,367 - 120,398,546 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000035645   ⟹   ENSSSCP00000029966
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX120,361,409 - 120,399,831 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000036178   ⟹   ENSSSCP00000029407
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX120,361,375 - 120,397,710 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000036460   ⟹   ENSSSCP00000028918
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX120,361,384 - 120,398,545 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000066442   ⟹   ENSSSCP00000072013
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX120,361,367 - 120,398,546 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000071969   ⟹   ENSSSCP00000066501
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX120,374,221 - 120,398,545 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000073039   ⟹   ENSSSCP00000068757
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX120,361,229 - 120,395,816 (+)Ensembl
RefSeq Acc Id: XM_001925732   ⟹   XP_001925767
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,236 - 120,400,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003360469   ⟹   XP_003360517
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,239 - 120,400,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003360470   ⟹   XP_003360518
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,238 - 120,400,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005673954   ⟹   XP_005674011
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,235 - 120,400,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005673955   ⟹   XP_005674012
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,237 - 120,400,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005673956   ⟹   XP_005674013
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,235 - 120,400,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005673957   ⟹   XP_005674014
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,236 - 120,400,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005673958   ⟹   XP_005674015
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,238 - 120,400,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005673959   ⟹   XP_005674016
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,237 - 120,400,282 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005673960   ⟹   XP_005674017
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,235 - 120,397,713 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005673961   ⟹   XP_005674018
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,240 - 120,400,282 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021080769   ⟹   XP_020936428
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,241 - 120,400,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021080770   ⟹   XP_020936429
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,240 - 120,400,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021080771   ⟹   XP_020936430
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,238 - 120,400,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021080772   ⟹   XP_020936431
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,238 - 120,397,713 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001302745
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,232 - 120,400,273 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002340868
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X120,361,232 - 120,400,273 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_001925767 (Get FASTA)   NCBI Sequence Viewer  
  XP_003360517 (Get FASTA)   NCBI Sequence Viewer  
  XP_003360518 (Get FASTA)   NCBI Sequence Viewer  
  XP_005674011 (Get FASTA)   NCBI Sequence Viewer  
  XP_005674012 (Get FASTA)   NCBI Sequence Viewer  
  XP_005674013 (Get FASTA)   NCBI Sequence Viewer  
  XP_005674014 (Get FASTA)   NCBI Sequence Viewer  
  XP_005674015 (Get FASTA)   NCBI Sequence Viewer  
  XP_005674016 (Get FASTA)   NCBI Sequence Viewer  
  XP_005674017 (Get FASTA)   NCBI Sequence Viewer  
  XP_005674018 (Get FASTA)   NCBI Sequence Viewer  
  XP_020936428 (Get FASTA)   NCBI Sequence Viewer  
  XP_020936429 (Get FASTA)   NCBI Sequence Viewer  
  XP_020936430 (Get FASTA)   NCBI Sequence Viewer  
  XP_020936431 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein CAN99571 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000013531
  ENSSSCP00000013531.3
  ENSSSCP00000028918.4
  ENSSSCP00000029407
  ENSSSCP00000029407.3
  ENSSSCP00000029966
  ENSSSCP00000029966.2
  ENSSSCP00000030836
  ENSSSCP00000030836.1
  ENSSSCP00000066501
  ENSSSCP00000066501.1
  ENSSSCP00000072013
  ENSSSCP00000072013.1
  ENSSSCP00015016980.1
  ENSSSCP00015017480.1
  ENSSSCP00015017617.1
  ENSSSCP00015017714.1
  ENSSSCP00015017813.1
  ENSSSCP00015017866.1
  ENSSSCP00025039922.1
  ENSSSCP00025040067.1
  ENSSSCP00025040246.1
  ENSSSCP00025040364.1
  ENSSSCP00025040448.1
  ENSSSCP00025040544.1
  ENSSSCP00025040660.1
  ENSSSCP00030000982.1
  ENSSSCP00030000992.1
  ENSSSCP00030001010.1
  ENSSSCP00030001037.1
  ENSSSCP00030001050.1
  ENSSSCP00030001062.1
  ENSSSCP00035031709.1
  ENSSSCP00035031726.1
  ENSSSCP00035031728.1
  ENSSSCP00035031734.1
  ENSSSCP00035031742.1
  ENSSSCP00035031744.1
  ENSSSCP00040027546.1
  ENSSSCP00040028444.1
  ENSSSCP00045004031.1
  ENSSSCP00045004079.1
  ENSSSCP00045004086.1
  ENSSSCP00045004107.1
  ENSSSCP00045004119.1
  ENSSSCP00045004134.1
  ENSSSCP00050043346.1
  ENSSSCP00050043351.1
  ENSSSCP00050043355.1
  ENSSSCP00050043361.1
  ENSSSCP00050043362.1
  ENSSSCP00050043364.1
  ENSSSCP00055001485.1
  ENSSSCP00055001589.1
  ENSSSCP00055001612.1
  ENSSSCP00055001670.1
  ENSSSCP00055001711.1
  ENSSSCP00055001733.1
  ENSSSCP00055001768.1
  ENSSSCP00060026997.1
  ENSSSCP00060027009.1
  ENSSSCP00060027024.1
  ENSSSCP00060027031.1
  ENSSSCP00060027038.1
  ENSSSCP00060027046.1
  ENSSSCP00060027060.1
  ENSSSCP00065007390.1
  ENSSSCP00065007394.1
  ENSSSCP00065007400.1
  ENSSSCP00065007417.1
  ENSSSCP00065007425.1
  ENSSSCP00065007437.1
  ENSSSCP00070006270.1
  ENSSSCP00070006294.1
  ENSSSCP00070006315.1
  ENSSSCP00070006337.1
  ENSSSCP00070006380.1
  ENSSSCP00070006385.1
RefSeq Acc Id: XP_005674011   ⟸   XM_005673954
- Peptide Label: isoform X2
- UniProtKB: A0A8D1VM09 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005674013   ⟸   XM_005673956
- Peptide Label: isoform X5
- UniProtKB: A0A8D1VM09 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005674017   ⟸   XM_005673960
- Peptide Label: isoform X11
- UniProtKB: K7GM30 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_001925767   ⟸   XM_001925732
- Peptide Label: isoform X1
- UniProtKB: K7GSF4 (UniProtKB/TrEMBL),   A0A4X1SVB5 (UniProtKB/TrEMBL),   A0A8D1VM09 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005674014   ⟸   XM_005673957
- Peptide Label: isoform X6
- UniProtKB: A0A8D1VM09 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005674016   ⟸   XM_005673959
- Peptide Label: isoform X9
- UniProtKB: A0A8D1VM09 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005674012   ⟸   XM_005673955
- Peptide Label: isoform X3
- UniProtKB: A0A8D1VM09 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936430   ⟸   XM_021080771
- Peptide Label: isoform X14
- UniProtKB: K7GM30 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005674015   ⟸   XM_005673958
- Peptide Label: isoform X7
- UniProtKB: A0A8D1VLZ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003360518   ⟸   XM_003360470
- Peptide Label: isoform X10
- UniProtKB: A0A8D1VLZ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936431   ⟸   XM_021080772
- Peptide Label: isoform X15
- UniProtKB: A0A4X1SVQ0 (UniProtKB/TrEMBL),   K7GNF4 (UniProtKB/TrEMBL),   K7GM30 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003360517   ⟸   XM_003360469
- Peptide Label: isoform X4
- UniProtKB: K7GQ00 (UniProtKB/TrEMBL),   A0A4X1SVS1 (UniProtKB/TrEMBL),   A0A8D1VLZ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005674018   ⟸   XM_005673961
- Peptide Label: isoform X13
- UniProtKB: A0A8D1VLZ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936429   ⟸   XM_021080770
- Peptide Label: isoform X12
- UniProtKB: A0A8D1VLZ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936428   ⟸   XM_021080769
- Peptide Label: isoform X8
- UniProtKB: A0A8D1VLZ9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000030836   ⟸   ENSSSCT00000034989
Ensembl Acc Id: ENSSSCP00000029407   ⟸   ENSSSCT00000036178
Ensembl Acc Id: ENSSSCP00000029966   ⟸   ENSSSCT00000035645
Ensembl Acc Id: ENSSSCP00000072013   ⟸   ENSSSCT00000066442
Ensembl Acc Id: ENSSSCP00000028918   ⟸   ENSSSCT00000036460
Ensembl Acc Id: ENSSSCP00000066501   ⟸   ENSSSCT00000071969
Ensembl Acc Id: ENSSSCP00000068757   ⟸   ENSSSCT00000073039
Ensembl Acc Id: ENSSSCP00000013531   ⟸   ENSSSCT00000013914

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000012727 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015031327 UniProtKB/TrEMBL
  ENSSSCG00025066049 UniProtKB/TrEMBL
  ENSSSCG00030001647 UniProtKB/TrEMBL
  ENSSSCG00035057870 UniProtKB/TrEMBL
  ENSSSCG00040048024 UniProtKB/TrEMBL
  ENSSSCG00045003587 UniProtKB/TrEMBL
  ENSSSCG00050073154 UniProtKB/TrEMBL
  ENSSSCG00055000880 UniProtKB/TrEMBL
  ENSSSCG00060046389 UniProtKB/TrEMBL
  ENSSSCG00065013388 UniProtKB/TrEMBL
  ENSSSCG00070003975 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000013914 ENTREZGENE
  ENSSSCT00000013914.5 UniProtKB/TrEMBL
  ENSSSCT00000034989 ENTREZGENE
  ENSSSCT00000034989.4 UniProtKB/TrEMBL
  ENSSSCT00000035645 ENTREZGENE
  ENSSSCT00000035645.4 UniProtKB/TrEMBL
  ENSSSCT00000036178 ENTREZGENE
  ENSSSCT00000036178.4 UniProtKB/TrEMBL
  ENSSSCT00000036460.4 UniProtKB/TrEMBL
  ENSSSCT00000066442 ENTREZGENE
  ENSSSCT00000066442.2 UniProtKB/TrEMBL
  ENSSSCT00000071969 ENTREZGENE
  ENSSSCT00000071969.2 UniProtKB/TrEMBL
  ENSSSCT00015042957.1 UniProtKB/TrEMBL
  ENSSSCT00015044205.1 UniProtKB/TrEMBL
  ENSSSCT00015044592.1 UniProtKB/TrEMBL
  ENSSSCT00015044782.1 UniProtKB/TrEMBL
  ENSSSCT00015044964.1 UniProtKB/TrEMBL
  ENSSSCT00015045084.1 UniProtKB/TrEMBL
  ENSSSCT00025091085.1 UniProtKB/TrEMBL
  ENSSSCT00025091339.1 UniProtKB/TrEMBL
  ENSSSCT00025091683.1 UniProtKB/TrEMBL
  ENSSSCT00025091946.1 UniProtKB/TrEMBL
  ENSSSCT00025092175.1 UniProtKB/TrEMBL
  ENSSSCT00025092400.1 UniProtKB/TrEMBL
  ENSSSCT00025092652.1 UniProtKB/TrEMBL
  ENSSSCT00030002469.1 UniProtKB/TrEMBL
  ENSSSCT00030002489.1 UniProtKB/TrEMBL
  ENSSSCT00030002535.1 UniProtKB/TrEMBL
  ENSSSCT00030002620.1 UniProtKB/TrEMBL
  ENSSSCT00030002664.1 UniProtKB/TrEMBL
  ENSSSCT00030002703.1 UniProtKB/TrEMBL
  ENSSSCT00035077484.1 UniProtKB/TrEMBL
  ENSSSCT00035077525.1 UniProtKB/TrEMBL
  ENSSSCT00035077531.1 UniProtKB/TrEMBL
  ENSSSCT00035077543.1 UniProtKB/TrEMBL
  ENSSSCT00035077556.1 UniProtKB/TrEMBL
  ENSSSCT00035077562.1 UniProtKB/TrEMBL
  ENSSSCT00040065112.1 UniProtKB/TrEMBL
  ENSSSCT00040067013.1 UniProtKB/TrEMBL
  ENSSSCT00045005993.1 UniProtKB/TrEMBL
  ENSSSCT00045006064.1 UniProtKB/TrEMBL
  ENSSSCT00045006072.1 UniProtKB/TrEMBL
  ENSSSCT00045006098.1 UniProtKB/TrEMBL
  ENSSSCT00045006111.1 UniProtKB/TrEMBL
  ENSSSCT00045006128.1 UniProtKB/TrEMBL
  ENSSSCT00050100047.1 UniProtKB/TrEMBL
  ENSSSCT00050100058.1 UniProtKB/TrEMBL
  ENSSSCT00050100063.1 UniProtKB/TrEMBL
  ENSSSCT00050100074.1 UniProtKB/TrEMBL
  ENSSSCT00050100081.1 UniProtKB/TrEMBL
  ENSSSCT00050100085.1 UniProtKB/TrEMBL
  ENSSSCT00055001972.1 UniProtKB/TrEMBL
  ENSSSCT00055002118.1 UniProtKB/TrEMBL
  ENSSSCT00055002146.1 UniProtKB/TrEMBL
  ENSSSCT00055002217.1 UniProtKB/TrEMBL
  ENSSSCT00055002259.1 UniProtKB/TrEMBL
  ENSSSCT00055002282.1 UniProtKB/TrEMBL
  ENSSSCT00055002324.1 UniProtKB/TrEMBL
  ENSSSCT00060063000.1 UniProtKB/TrEMBL
  ENSSSCT00060063020.1 UniProtKB/TrEMBL
  ENSSSCT00060063056.1 UniProtKB/TrEMBL
  ENSSSCT00060063070.1 UniProtKB/TrEMBL
  ENSSSCT00060063079.1 UniProtKB/TrEMBL
  ENSSSCT00060063089.1 UniProtKB/TrEMBL
  ENSSSCT00060063117.1 UniProtKB/TrEMBL
  ENSSSCT00065018091.1 UniProtKB/TrEMBL
  ENSSSCT00065018103.1 UniProtKB/TrEMBL
  ENSSSCT00065018113.1 UniProtKB/TrEMBL
  ENSSSCT00065018151.1 UniProtKB/TrEMBL
  ENSSSCT00065018175.1 UniProtKB/TrEMBL
  ENSSSCT00065018193.1 UniProtKB/TrEMBL
  ENSSSCT00070007639.1 UniProtKB/TrEMBL
  ENSSSCT00070007665.1 UniProtKB/TrEMBL
  ENSSSCT00070007691.1 UniProtKB/TrEMBL
  ENSSSCT00070007713.1 UniProtKB/TrEMBL
  ENSSSCT00070007758.1 UniProtKB/TrEMBL
  ENSSSCT00070007764.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.30.140 UniProtKB/TrEMBL
  3.30.1370.10 UniProtKB/TrEMBL
InterPro Agenet-like_dom UniProtKB/TrEMBL
  FMR1 UniProtKB/TrEMBL
  FMRP_KH0 UniProtKB/TrEMBL
  FXMR_C2 UniProtKB/TrEMBL
  FXMRP1_C_core UniProtKB/TrEMBL
  KH_dom UniProtKB/TrEMBL
  KH_dom_type_1 UniProtKB/TrEMBL
  KH_dom_type_1_sf UniProtKB/TrEMBL
  KH_I_FMR1_rpt1 UniProtKB/TrEMBL
  KH_I_FMR1_rpt2 UniProtKB/TrEMBL
  Tudor_Agenet_FMR1_rpt1 UniProtKB/TrEMBL
  Tudor_Agenet_FMR1_rpt2 UniProtKB/TrEMBL
  Tudor_FRX1 UniProtKB/TrEMBL
KEGG Report ssc:100155078 UniProtKB/TrEMBL
NCBI Gene FMR1 ENTREZGENE
PANTHER PTHR10603 UniProtKB/TrEMBL
  SYNAPTIC FUNCTIONAL REGULATOR FMR1 UniProtKB/TrEMBL
Pfam Agenet UniProtKB/TrEMBL
  FXMR_C2 UniProtKB/TrEMBL
  FXMRP1_C_core UniProtKB/TrEMBL
  KH_1 UniProtKB/TrEMBL
  KH_9 UniProtKB/TrEMBL
  Tudor_FRX1 UniProtKB/TrEMBL
PROSITE AGENET_LIKE UniProtKB/TrEMBL
  KH_TYPE_1 UniProtKB/TrEMBL
SMART SM00322 UniProtKB/TrEMBL
Superfamily-SCOP SSF54791 UniProtKB/TrEMBL
UniProt A0A4X1STW5_PIG UniProtKB/TrEMBL
  A0A4X1SVB5 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SVQ0 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SVS1 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SVU1_PIG UniProtKB/TrEMBL
  A0A5G2R477_PIG UniProtKB/TrEMBL
  A0A5G2R7C3_PIG UniProtKB/TrEMBL
  A0A8D0TSH7_PIG UniProtKB/TrEMBL
  A0A8D0UZB7_PIG UniProtKB/TrEMBL
  A0A8D1ABU6_PIG UniProtKB/TrEMBL
  A0A8D1PAT2_PIG UniProtKB/TrEMBL
  A0A8D1PB30_PIG UniProtKB/TrEMBL
  A0A8D1VLZ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1VM09 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D2BLA5_PIG UniProtKB/TrEMBL
  A5PI50_PIG UniProtKB/TrEMBL
  K7GM30 ENTREZGENE, UniProtKB/TrEMBL
  K7GNF4 ENTREZGENE, UniProtKB/TrEMBL
  K7GQ00 ENTREZGENE, UniProtKB/TrEMBL
  K7GSF4 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary F1RQ52 UniProtKB/TrEMBL
VGNC ID VGNC:88175 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-04-04 FMR1  Fragile X messenger ribonucleoprotein 1  FMR1  FMRP translational regulator 1  Symbol and/or name change 19259463 PROVISIONAL
2019-08-27 FMR1  FMRP translational regulator 1  FMR1  fragile X mental retardation 1  Symbol and/or name change 5135510 APPROVED