CAV1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 18 | 29,649,992 - 29,682,465 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 18 | 29,648,120 - 29,682,451 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 18 | 31,745,664 - 31,778,987 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CAV1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 7 | 116,525,009 - 116,561,185 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 7 | 116,524,994 - 116,561,179 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 7 | 116,165,063 - 116,201,239 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 7 | 115,952,075 - 115,988,466 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 7 | 115,758,789 - 115,795,181 | NCBI | | | | | Celera | 7 | 110,972,249 - 111,008,654 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q31.2 | NCBI | | | | | HuRef | 7 | 110,530,835 - 110,566,784 (+) | NCBI | | HuRef | | | CHM1_1 | 7 | 116,098,482 - 116,134,827 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 7 | 117,840,041 - 117,876,175 (+) | NCBI | | T2T-CHM13v2.0 | | | CRA_TCAGchr7v2 | 7 | 115,560,275 - 115,596,679 (+) | NCBI | | | | |
|
Cav1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 6 | 17,306,387 - 17,341,323 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 17,306,334 - 17,341,451 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 17,306,335 - 17,341,328 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 17,306,335 - 17,341,452 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 17,256,370 - 17,291,324 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 17,256,370 - 17,291,324 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 17,378,835 - 17,414,670 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | A2 | NCBI | | | | | cM Map | 6 | 7.73 | NCBI | | | | |
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Cav1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 4 | 46,606,538 - 46,639,616 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 45,640,624 - 45,673,708 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 45,634,918 - 45,673,705 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 50,634,317 - 50,667,383 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 46,555,310 - 46,588,376 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 44,969,814 - 45,002,892 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 44,597,123 - 44,630,206 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 44,597,123 - 44,630,200 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 45,203,494 - 45,236,461 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 42,956,102 - 42,989,057 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 4 | 43,098,177 - 43,130,873 (+) | NCBI | | | | | Celera | 4 | 40,918,628 - 40,949,677 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q22 | NCBI | | | | |
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Cav1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955432 | 22,258,250 - 22,292,403 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955432 | 22,258,262 - 22,292,403 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CAV1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 6 | 153,356,633 - 153,393,045 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 7 | 5,367,106 - 5,403,301 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 7 | 108,497,125 - 108,533,090 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 7 | 121,193,678 - 121,229,655 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 7 | 121,193,424 - 121,229,655 (+) | Ensembl | panpan1.1 | | panPan2 | |
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CAV1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 14 | 55,458,934 - 55,494,563 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 14 | 55,461,048 - 55,492,935 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 14 | 54,856,462 - 54,888,069 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 14 | 55,500,946 - 55,536,541 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 14 | 55,503,040 - 55,536,538 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 14 | 55,530,973 - 55,562,566 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 14 | 55,219,411 - 55,251,015 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 14 | 55,590,528 - 55,622,125 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Cav1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405118 | 44,152,891 - 44,185,619 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936589 | 2,504,224 - 2,537,170 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936589 | 2,504,235 - 2,536,778 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CAV1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 21 | 85,222,724 - 85,258,562 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 21 | 85,222,879 - 85,258,627 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666042 | 18,474,866 - 18,510,943 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cav1 (Heterocephalus glaber - naked mole-rat) |
|