Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Creb3l1 | Rat | osteogenesis imperfecta type 16 | | ISO | CREB3L1 (Homo sapiens) | 7240710 | | OMIM | | |
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Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Creb3l1 | Rat | osteogenesis imperfecta type 16 | | ISO | CREB3L1 (Homo sapiens) | 7240710 | | OMIM | | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | OASIS, a CREB/ATF-family member, modulates UPR signalling in astrocytes. | Kondo S, etal., Nat Cell Biol 2005 Feb;7(2):186-94. Epub 2005 Jan 23. |
3. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
4. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
5. | GOA pipeline | RGD automated data pipeline |
6. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
7. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
8. | Comprehensive gene review and curation | RGD comprehensive gene curation |
9. | Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. | Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11. |
10. | The impact of the unfolded protein response on human disease. | Wang S and Kaufman RJ, J Cell Biol. 2012 Jun 25;197(7):857-67. doi: 10.1083/jcb.201110131. |
PMID:16236796 | PMID:19767743 | PMID:20668028 | PMID:22705851 | PMID:24623760 | PMID:24716865 | PMID:25310401 | PMID:25915053 | PMID:26503226 | PMID:27121396 | PMID:32319174 | PMID:35051932 |
PMID:35455992 |
Creb3l1 (Rattus norvegicus - Norway rat) |
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CREB3L1 (Homo sapiens - human) |
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Creb3l1 (Mus musculus - house mouse) |
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Creb3l1 (Chinchilla lanigera - long-tailed chinchilla) |
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CREB3L1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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CREB3L1 (Canis lupus familiaris - dog) |
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Creb3l1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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CREB3L1 (Sus scrofa - pig) |
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CREB3L1 (Chlorocebus sabaeus - green monkey) |
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Creb3l1 (Heterocephalus glaber - naked mole-rat) |
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Variants in Creb3l1
122 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RH134248 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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9 | 11 | 49 | 113 | 91 | 90 | 59 | 25 | 59 | 6 | 218 | 97 | 93 | 45 | 60 | 31 |
RefSeq Transcripts | NM_001005562 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_039105430 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC135645 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
BC081951 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH473949 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000003 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000007771 ⟹ ENSRNOP00000007771 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001005562 ⟹ NP_001005562 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039105430 ⟹ XP_038961358 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Protein RefSeqs | NP_001005562 | (Get FASTA) | NCBI Sequence Viewer |
XP_038961358 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH81951 | (Get FASTA) | NCBI Sequence Viewer |
EDL79555 | (Get FASTA) | NCBI Sequence Viewer | |
EDL79556 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000007771.3 | ||
GenBank Protein | Q66HA2 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001005562 ⟸ NM_001005562 |
- UniProtKB: | Q66HA2 (UniProtKB/Swiss-Prot), A6HNF4 (UniProtKB/TrEMBL) |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000007771 ⟸ ENSRNOT00000007771 |
RefSeq Acc Id: | XP_038961358 ⟸ XM_039105430 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8L2UHZ0 (UniProtKB/TrEMBL) |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q66HA2-F1-model_v2 | AlphaFold | Q66HA2 | 1-520 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13692221 | ||||||||
Promoter ID: | EPDNEW_R2746 | ||||||||
Type: | multiple initiation site | ||||||||
Name: | Creb3l1_1 | ||||||||
Description: | cAMP responsive element binding protein 3-like 1 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1359613 | AgrOrtholog |
BioCyc Gene | G2FUF-48714 | BioCyc |
Ensembl Genes | ENSRNOG00000005413 | Ensembl, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000007771.4 | UniProtKB/TrEMBL |
Gene3D-CATH | 1.20.5.170 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
IMAGE_CLONE | IMAGE:7122657 | IMAGE-MGC_LOAD |
InterPro | bZIP | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
bZIP_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | rno:362165 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
MGC_CLONE | MGC:94038 | IMAGE-MGC_LOAD |
NCBI Gene | 362165 | ENTREZGENE |
PANTHER | CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN A | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR46004:SF1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | bZIP_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Creb3l1 | PhenoGen |
PRINTS | LEUZIPPRCREB | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PROSITE | BZIP | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
BZIP_BASIC | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
RatGTEx | ENSRNOG00000005413 | RatGTEx |
SMART | BRLZ | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | SSF57959 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0A8L2UHZ0 | ENTREZGENE, UniProtKB/TrEMBL |
A6HNF4 | ENTREZGENE, UniProtKB/TrEMBL | |
A6HNF5_RAT | UniProtKB/TrEMBL | |
CR3L1_RAT | UniProtKB/Swiss-Prot, ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2006-03-30 | Creb3l1 | cAMP responsive element binding protein 3-like 1 | Symbol and Name status set to approved | 1299863 | APPROVED | ||
2005-07-29 | Creb3l1 | cAMP responsive element binding protein 3-like 1 | Symbol and Name status set to provisional | 70820 | PROVISIONAL |