Clec4a3 (C-type lectin domain family 4, member A3) - Rat Genome Database

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Gene: Clec4a3 (C-type lectin domain family 4, member A3) Rattus norvegicus
Analyze
Symbol: Clec4a3
Name: C-type lectin domain family 4, member A3
RGD ID: 1359528
Description: Predicted to enable D-mannose binding activity; calcium ion binding activity; and pattern recognition receptor activity. Predicted to be involved in several processes, including antifungal innate immune response; negative regulation of tumor necrosis factor production; and plasmacytoid dendritic cell antigen processing and presentation. Predicted to be active in external side of plasma membrane. Orthologous to human CLEC4A (C-type lectin domain family 4 member A); INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; 17beta-estradiol 3-benzoate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: antigen-presenting cell lectin-like receptor complex APLEC; Dcir3; dendritic cell inhibitory receptor 3
RGD Orthologs
Human
Mouse
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Is Marker For: Strains:   DA.E3-(D4Wox49-D4Got136)/Rhd  
Candidate Gene For: Oia7
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84157,885,899 - 157,896,728 (+)NCBIGRCr8
mRatBN7.24156,214,030 - 156,224,818 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4156,214,718 - 156,224,817 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4162,481,963 - 162,491,406 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04158,265,186 - 158,274,625 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04156,910,273 - 156,919,712 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04155,913,366 - 155,923,079 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4155,913,366 - 155,923,079 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04222,933,145 - 222,943,978 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44159,464,410 - 159,474,023 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14159,709,345 - 159,718,959 (+)NCBI
Celera4145,032,051 - 145,041,552 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1-naphthyl isothiocyanate  (EXP)
17beta-estradiol  (EXP)
17beta-estradiol 3-benzoate  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-phenylprop-2-enal  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
carbon nanotube  (ISO)
choline  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
Cuprizon  (EXP)
cyclosporin A  (EXP)
dexamethasone  (ISO)
Dibutyl phosphate  (ISO)
doxorubicin  (EXP)
epoxiconazole  (ISO)
eugenol  (ISO)
folic acid  (ISO)
fonofos  (ISO)
furan  (EXP)
indoles  (EXP)
indometacin  (ISO)
ketamine  (EXP)
L-methionine  (ISO)
lead(0)  (ISO)
lipopolysaccharide  (ISO)
melatonin  (ISO)
methylmercury chloride  (EXP,ISO)
N-nitrosodiethylamine  (EXP)
N-nitrosodimethylamine  (EXP)
nevirapine  (EXP)
nickel atom  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paclitaxel  (EXP)
paracetamol  (ISO)
paraquat  (EXP)
parathion  (ISO)
pioglitazone  (ISO)
pirinixic acid  (ISO)
sirolimus  (EXP)
Soman  (EXP)
succimer  (ISO)
sunitinib  (ISO)
terbufos  (ISO)
testosterone  (EXP)
tetrachloromethane  (ISO)
thioacetamide  (EXP)
tolcapone  (EXP)
topotecan  (EXP)
tremolite asbestos  (ISO)
trimellitic anhydride  (ISO)
triphenyl phosphate  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Identification of lectin-like receptors expressed by antigen presenting cells and neutrophils and their mapping to a novel gene complex. Flornes LM, etal., Immunogenetics 2004 Oct;56(7):506-17. Epub 2004 Sep 11.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:17665455   PMID:18258799   PMID:19279651   PMID:20530286   PMID:27015765  


Genomics

Comparative Map Data
Clec4a3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84157,885,899 - 157,896,728 (+)NCBIGRCr8
mRatBN7.24156,214,030 - 156,224,818 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4156,214,718 - 156,224,817 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4162,481,963 - 162,491,406 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04158,265,186 - 158,274,625 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04156,910,273 - 156,919,712 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04155,913,366 - 155,923,079 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4155,913,366 - 155,923,079 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04222,933,145 - 222,943,978 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44159,464,410 - 159,474,023 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14159,709,345 - 159,718,959 (+)NCBI
Celera4145,032,051 - 145,041,552 (+)NCBICelera
Cytogenetic Map4q42NCBI
CLEC4A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38128,102,907 - 8,138,607 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl128,123,617 - 8,138,607 (+)EnsemblGRCh38hg38GRCh38
GRCh37128,276,213 - 8,291,203 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36128,167,495 - 8,182,470 (+)NCBINCBI36Build 36hg18NCBI36
Build 34128,167,494 - 8,182,470NCBI
Celera129,853,291 - 9,868,264 (+)NCBICelera
Cytogenetic Map12p13.31NCBI
HuRef128,087,926 - 8,102,887 (+)NCBIHuRef
CHM1_1128,275,451 - 8,290,436 (+)NCBICHM1_1
T2T-CHM13v2.0128,116,443 - 8,152,211 (+)NCBIT2T-CHM13v2.0
Clec4a3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396122,929,474 - 122,946,837 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6122,929,474 - 122,946,834 (+)EnsemblGRCm39 Ensembl
GRCm386122,952,515 - 122,969,878 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6122,952,515 - 122,969,875 (+)EnsemblGRCm38mm10GRCm38
MGSCv376122,902,662 - 122,919,892 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366122,918,452 - 122,935,152 (+)NCBIMGSCv36mm8
Celera6124,751,098 - 124,768,341 (+)NCBICelera
Cytogenetic Map6F2NCBI
cM Map658.04NCBI
CLEC4A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21013,678,544 - 13,694,497 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11213,675,663 - 13,691,258 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0128,242,240 - 8,257,860 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1128,285,174 - 8,300,029 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl128,285,174 - 8,300,029 (+)Ensemblpanpan1.1panPan2
CLEC4A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12737,493,740 - 37,510,276 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha279,105,685 - 9,122,242 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02737,847,699 - 37,864,274 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12737,722,356 - 37,738,913 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02737,763,894 - 37,780,460 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0278,592,389 - 8,609,003 (-)NCBIUU_Cfam_GSD_1.0
LOC101965910
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494599,260,992 - 99,284,639 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936892454,036 - 467,957 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC110258709
(Sus scrofa - pig)		 No map positions available.
CLEC4A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1118,190,312 - 8,207,451 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl118,190,370 - 8,207,438 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666089289,695 - 304,616 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Clec4a3
249 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:200
Count of miRNA genes:143
Interacting mature miRNAs:154
Transcripts:ENSRNOT00000013308
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4144639524182687754Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4132422778177422778Rat
1582237Kidm34Kidney mass QTL 3440.0001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)4148090542168069246Rat
61446Coreg2Compensatory renal growth QTL 23.5kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)4148423102157580971Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4144639524182687754Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4126395976167139601Rat
1331802Srn5Serum renin concentration QTL 53.045renin activity (VT:0005581)plasma renin activity level (CMO:0000116)4119428175157578333Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4138503169179293946Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat
10053718Scort25Serum corticosterone level QTL 252.150.0097blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)4155561574182687754Rat
1549827Scl46Serum cholesterol level QTL 463.5blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)4132396220177396220Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)493308457167139447Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4109866907167139601Rat
7411558Bw133Body weight QTL 13313.840.001body mass (VT:0001259)body weight gain (CMO:0000420)4125590636170590636Rat
6478778Anxrr51Anxiety related response QTL 510.25384locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4124778595169778595Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4145568712182687754Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
631511Pia7Pristane induced arthritis QTL 74.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat
1581574Eae20Experimental allergic encephalomyelitis QTL 207.8nervous system integrity trait (VT:0010566)percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)4153031106158841762Rat
731178Oia7Oil induced arthritis QTL 70.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4156050654157232313Rat
634347Hcar8Hepatocarcinoma resistance QTL 85.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)4123143783168143783Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
2303623Vencon2Ventilatory control QTL 23.8respiration trait (VT:0001943)minute ventilation (CMO:0000132)4135204660180204660Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4135699135180699135Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)485379421167139601Rat
61422Cia13Collagen induced arthritis QTL 134.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4132642577167139601Rat
634342Cia24Collagen induced arthritis QTL 244.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4146565735175236377Rat
737978Pia23Pristane induced arthritis QTL 235.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat
61362Oia2Oil induced arthritis QTL 20.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)464528739157573521Rat
12798519Anxrr54Anxiety related response QTL 542.540.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4114627026159627026Rat
2293659Bmd35Bone mineral density QTL 354.50.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)4137755016181392681Rat
1331759Hrtrt13Heart rate QTL 133.54628heart pumping trait (VT:2000009)heart rate (CMO:0000002)4110275411168266883Rat
724535Cm18Cardiac mass QTL 182.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)4118856416163856416Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
12798525Anxrr57Anxiety related response QTL 573.210.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4147278504167139601Rat

Markers in Region
RH130535  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24156,224,520 - 156,224,733 (-)MAPPERmRatBN7.2
Rnor_6.04155,913,090 - 155,913,302NCBIRnor6.0
Rnor_5.04222,933,230 - 222,933,442UniSTSRnor5.0
RGSC_v3.44159,474,087 - 159,474,299UniSTSRGSC3.4
Celera4145,041,616 - 145,041,828UniSTS
RH 3.4 Map41002.9UniSTS
Cytogenetic Map4q42UniSTS


Related Rat Strains
The following Strains have been annotated to Clec4a3
DA.E3-(D4Wox49-D4Got136)/Rhd    


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 41 107 87 86 55 25 55 6 206 89 87 45 57 31

Sequence


Ensembl Acc Id: ENSRNOT00000013308   ⟹   ENSRNOP00000013308
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4156,214,718 - 156,224,817 (+)Ensembl
Rnor_6.0 Ensembl4155,913,366 - 155,923,079 (-)Ensembl
RefSeq Acc Id: NM_001005891   ⟹   NP_001005891
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84157,886,758 - 157,896,367 (+)NCBI
mRatBN7.24156,214,843 - 156,224,457 (+)NCBI
Rnor_6.04155,913,366 - 155,923,079 (-)NCBI
Rnor_5.04222,933,145 - 222,943,978 (-)NCBI
RGSC_v3.44159,464,410 - 159,474,023 (+)RGD
Celera4145,032,051 - 145,041,552 (+)RGD
Sequence:
RefSeq Acc Id: XM_039107889   ⟹   XP_038963817
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84157,885,899 - 157,896,728 (+)NCBI
mRatBN7.24156,214,030 - 156,224,818 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001005891 (Get FASTA)   NCBI Sequence Viewer  
  XP_038963817 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAR31147 (Get FASTA)   NCBI Sequence Viewer  
  AAS76658 (Get FASTA)   NCBI Sequence Viewer  
  EDM01975 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000013308.3
RefSeq Acc Id: NP_001005891   ⟸   NM_001005891
- UniProtKB: Q5YIS0 (UniProtKB/TrEMBL),   A6ILG4 (UniProtKB/TrEMBL),   Q2TUL9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000013308   ⟸   ENSRNOT00000013308
RefSeq Acc Id: XP_038963817   ⟸   XM_039107889
- Peptide Label: isoform X1
- UniProtKB: E9PT25 (UniProtKB/TrEMBL)
Protein Domains
C-type lectin

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9PT25-F1-model_v2 AlphaFold E9PT25 1-237 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359528 AgrOrtholog
BioCyc Gene G2FUF-43135 BioCyc
Ensembl Genes ENSRNOG00000010018 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000013308.6 UniProtKB/TrEMBL
Gene3D-CATH 3.10.100.10 UniProtKB/TrEMBL
InterPro C-type_lectin UniProtKB/TrEMBL
  C-type_lectin-like UniProtKB/TrEMBL
  C-type_lectin_CS UniProtKB/TrEMBL
  C-type_lectin_fold UniProtKB/TrEMBL
  C-type_Lectin_Receptor_IMM UniProtKB/TrEMBL
  CD209-like_CTLD UniProtKB/TrEMBL
KEGG Report rno:362431 UniProtKB/TrEMBL
NCBI Gene 362431 ENTREZGENE
PANTHER CD209 ANTIGEN-LIKE PROTEIN C-LIKE UniProtKB/TrEMBL
  KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY F MEMBER 2 UniProtKB/TrEMBL
Pfam Lectin_C UniProtKB/TrEMBL
PhenoGen Clec4a3 PhenoGen
PROSITE C_TYPE_LECTIN_1 UniProtKB/TrEMBL
  C_TYPE_LECTIN_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000010018 RatGTEx
SMART CLECT UniProtKB/TrEMBL
Superfamily-SCOP C-type_lectin_fold UniProtKB/TrEMBL
UniProt A6ILG4 ENTREZGENE, UniProtKB/TrEMBL
  E9PT25 ENTREZGENE, UniProtKB/TrEMBL
  Q2TUL9 ENTREZGENE, UniProtKB/TrEMBL
  Q5YIS0 ENTREZGENE
UniProt Secondary Q5YIS0 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-06-08 Clec4a3  C-type lectin domain family 4, member A3  Clec4a3  C-type lectin domain family 4, member a3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-03 Clec4a3  C-type lectin domain family 4, member a3  Dcir3  dendritic cell inhibitory receptor 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-07-29 Dcir3  dendritic cell inhibitory receptor 3      Symbol and Name status set to provisional 70820 PROVISIONAL