Glt8d1 (glycosyltransferase 8 domain containing 1) - Rat Genome Database

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Gene: Glt8d1 (glycosyltransferase 8 domain containing 1) Rattus norvegicus
Analyze
Symbol: Glt8d1
Name: glycosyltransferase 8 domain containing 1
RGD ID: 1359293
Description: Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Predicted to be active in Golgi apparatus. Orthologous to human GLT8D1 (glycosyltransferase 8 domain containing 1); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Da2-24; glycosyltransferase 8 domain-containing protein 1; glycosyltransferase AD-017; MGC94018
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,198,152 - 6,213,671 (+)NCBIGRCr8
mRatBN7.2166,192,269 - 6,207,227 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,192,300 - 6,207,229 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx166,204,136 - 6,219,074 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0167,349,598 - 7,364,538 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0166,211,305 - 6,226,236 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0167,082,450 - 7,097,405 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,082,450 - 7,097,401 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0167,011,033 - 7,025,989 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,429,357 - 6,444,262 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1166,429,354 - 6,444,259 (+)NCBI
Celera168,982,084 - 8,997,063 (-)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. null JRS Domain-based curation
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:19946888  


Genomics

Comparative Map Data
Glt8d1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,198,152 - 6,213,671 (+)NCBIGRCr8
mRatBN7.2166,192,269 - 6,207,227 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,192,300 - 6,207,229 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx166,204,136 - 6,219,074 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0167,349,598 - 7,364,538 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0166,211,305 - 6,226,236 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0167,082,450 - 7,097,405 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,082,450 - 7,097,401 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0167,011,033 - 7,025,989 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,429,357 - 6,444,262 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1166,429,354 - 6,444,259 (+)NCBI
Celera168,982,084 - 8,997,063 (-)NCBICelera
Cytogenetic Map16p16NCBI
GLT8D1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38352,694,486 - 52,705,791 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl352,694,486 - 52,706,032 (-)EnsemblGRCh38hg38GRCh38
GRCh37352,728,502 - 52,739,807 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36352,703,544 - 52,715,088 (-)NCBINCBI36Build 36hg18NCBI36
Build 34352,703,544 - 52,712,662NCBI
Celera352,707,215 - 52,718,759 (-)NCBICelera
Cytogenetic Map3p21.1NCBI
HuRef352,790,354 - 52,801,626 (-)NCBIHuRef
CHM1_1352,680,576 - 52,692,270 (-)NCBICHM1_1
T2T-CHM13v2.0352,727,397 - 52,738,983 (-)NCBIT2T-CHM13v2.0
Glt8d1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391430,723,137 - 30,733,948 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1430,723,357 - 30,733,948 (+)EnsemblGRCm39 Ensembl
GRCm381431,001,197 - 31,012,441 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1431,001,400 - 31,011,991 (+)EnsemblGRCm38mm10GRCm38
MGSCv371431,814,579 - 31,825,627 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361429,830,713 - 29,840,994 (+)NCBIMGSCv36mm8
Celera1427,259,208 - 27,270,258 (+)NCBICelera
Cytogenetic Map14BNCBI
cM Map1419.09NCBI
Glt8d1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554302,678,166 - 2,690,555 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554302,678,166 - 2,690,555 (-)NCBIChiLan1.0ChiLan1.0
GLT8D1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2252,688,109 - 52,699,781 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1352,692,875 - 52,704,528 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0352,634,996 - 52,646,702 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1353,862,812 - 53,873,900 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl353,862,812 - 53,873,900 (-)Ensemblpanpan1.1panPan2
GLT8D1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12037,093,826 - 37,103,213 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2037,093,653 - 37,103,211 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2037,075,552 - 37,085,237 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02037,444,317 - 37,454,006 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2037,447,602 - 37,454,004 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12036,807,880 - 36,817,553 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02037,216,508 - 37,226,173 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02037,493,970 - 37,503,657 (+)NCBIUU_Cfam_GSD_1.0
Glt8d1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118170,345,374 - 170,357,203 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364733,483,948 - 3,495,773 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364733,483,948 - 3,495,611 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GLT8D1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1334,828,604 - 34,839,794 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11334,828,601 - 34,839,854 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21338,028,635 - 38,039,461 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GLT8D1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12214,068,377 - 14,078,064 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2214,068,718 - 14,077,775 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041152,822,225 - 152,831,715 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Glt8d1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248224,506,395 - 4,521,704 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248224,506,275 - 4,520,151 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Glt8d1
84 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:259
Count of miRNA genes:169
Interacting mature miRNAs:185
Transcripts:ENSRNOT00000013291, ENSRNOT00000024624
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357403Slep4Serum leptin concentration QTL 43.91blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1619639137Rat
1600369Hcas8Hepatocarcinoma susceptibility QTL 8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)16122477621Rat
631830Alc7Alcohol consumption QTL 72.9consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16126727669Rat
634355Rends4Renal damage susceptibility QTL 40.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)16126727669Rat
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16126727669Rat
9590151Scort8Serum corticosterone level QTL 88.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)16130836262Rat
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139533930Rat
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16143534949Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16144588133Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683223646053497Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683223659492508Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683223659492508Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683223659492508Rat
2301406Kidm39Kidney mass QTL 390.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)16285170915884239Rat
1300133Rf24Renal function QTL 243.64blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)16338015021361552Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338015043025077Rat
737825Alc13Alcohol consumption QTL 134.5consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760916039848Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16422760943025077Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16422760948972724Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
61372Bp40Blood pressure QTL 402.2blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)16422773017696785Rat

Markers in Region
BE113039  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,192,928 - 6,193,116 (+)MAPPERmRatBN7.2
Rnor_6.0167,083,110 - 7,083,297NCBIRnor6.0
Rnor_5.0167,011,693 - 7,011,880UniSTSRnor5.0
RGSC_v3.4166,430,017 - 6,430,204UniSTSRGSC3.4
Celera168,996,216 - 8,996,403UniSTS
RH 3.4 Map1645.8UniSTS
Cytogenetic Map16p16UniSTS
AA891835  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,206,754 - 6,206,943 (+)MAPPERmRatBN7.2
Rnor_6.0167,096,933 - 7,097,121NCBIRnor6.0
Rnor_5.0167,025,517 - 7,025,705UniSTSRnor5.0
RGSC_v3.4166,443,790 - 6,443,978UniSTSRGSC3.4
Celera168,982,368 - 8,982,556UniSTS
RH 3.4 Map1644.2UniSTS
Cytogenetic Map16p16UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 33 43 27 19 27 2 2 74 34 41 11 2
Low 10 14 14 14 6 9 1 6
Below cutoff

Sequence


RefSeq Acc Id: ENSRNOT00000013291   ⟹   ENSRNOP00000013291
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl166,192,300 - 6,207,229 (+)Ensembl
Rnor_6.0 Ensembl167,082,450 - 7,097,401 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000024624   ⟹   ENSRNOP00000024624
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl166,198,298 - 6,207,225 (+)Ensembl
Rnor_6.0 Ensembl167,088,476 - 7,097,079 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000118271   ⟹   ENSRNOP00000077668
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl166,199,177 - 6,207,225 (+)Ensembl
RefSeq Acc Id: NM_001007683   ⟹   NP_001007684
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,198,714 - 6,213,669 (+)NCBI
mRatBN7.2166,192,269 - 6,207,227 (+)NCBI
Rnor_6.0167,082,450 - 7,097,405 (+)NCBI
Rnor_5.0167,011,033 - 7,025,989 (+)NCBI
RGSC_v3.4166,429,357 - 6,444,262 (+)RGD
Celera168,982,084 - 8,997,063 (-)RGD
Sequence:
RefSeq Acc Id: XM_063275293   ⟹   XP_063131363
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,198,602 - 6,213,671 (+)NCBI
RefSeq Acc Id: XM_063275294   ⟹   XP_063131364
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,198,152 - 6,213,671 (+)NCBI
RefSeq Acc Id: XM_063275295   ⟹   XP_063131365
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,198,852 - 6,213,671 (+)NCBI
RefSeq Acc Id: XM_063275296   ⟹   XP_063131366
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,209,223 - 6,213,671 (+)NCBI
RefSeq Acc Id: XM_063275297   ⟹   XP_063131367
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,198,714 - 6,212,879 (+)NCBI
RefSeq Acc Id: NP_001007684   ⟸   NM_001007683
- UniProtKB: Q6AYF6 (UniProtKB/Swiss-Prot),   A6KG13 (UniProtKB/TrEMBL),   A0A8L2Q662 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000024624   ⟸   ENSRNOT00000024624
RefSeq Acc Id: ENSRNOP00000013291   ⟸   ENSRNOT00000013291
RefSeq Acc Id: ENSRNOP00000077668   ⟸   ENSRNOT00000118271
RefSeq Acc Id: XP_063131364   ⟸   XM_063275294
- Peptide Label: isoform X1
- UniProtKB: Q6AYF6 (UniProtKB/Swiss-Prot),   A0A8L2Q662 (UniProtKB/TrEMBL),   A6KG13 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131363   ⟸   XM_063275293
- Peptide Label: isoform X1
- UniProtKB: Q6AYF6 (UniProtKB/Swiss-Prot),   A0A8L2Q662 (UniProtKB/TrEMBL),   A6KG13 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131367   ⟸   XM_063275297
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063131365   ⟸   XM_063275295
- Peptide Label: isoform X1
- UniProtKB: Q6AYF6 (UniProtKB/Swiss-Prot),   A0A8L2Q662 (UniProtKB/TrEMBL),   A6KG13 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131366   ⟸   XM_063275296
- Peptide Label: isoform X2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6AYF6-F1-model_v2 AlphaFold Q6AYF6 1-371 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699921
Promoter ID:EPDNEW_R10444
Type:initiation region
Name:Glt8d1_1
Description:glycosyltransferase 8 domain containing 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0167,082,443 - 7,082,503EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359293 AgrOrtholog
BioCyc Gene G2FUF-12171 BioCyc
Ensembl Genes ENSRNOG00000018179 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00055021675 UniProtKB/Swiss-Prot
  ENSRNOG00060014516 UniProtKB/Swiss-Prot
  ENSRNOG00065015407 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000013291 ENTREZGENE
  ENSRNOT00000013291.7 UniProtKB/TrEMBL
  ENSRNOT00000024624.7 UniProtKB/TrEMBL
  ENSRNOT00000118271.1 UniProtKB/TrEMBL
  ENSRNOT00055037171 UniProtKB/Swiss-Prot
  ENSRNOT00060024872 UniProtKB/Swiss-Prot
  ENSRNOT00065025591 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7121464 IMAGE-MGC_LOAD
InterPro Glyco_trans_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleotide-diphossugar_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:306253 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:94018 IMAGE-MGC_LOAD
NCBI Gene 306253 ENTREZGENE
PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Glyco_transf_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Glt8d1 PhenoGen
RatGTEx ENSRNOG00000018179 RatGTEx
  ENSRNOG00055021675 RatGTEx
  ENSRNOG00060014516 RatGTEx
  ENSRNOG00065015407 RatGTEx
Superfamily-SCOP SSF53448 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I5Y653_RAT UniProtKB/TrEMBL
  A0A8L2Q662 ENTREZGENE, UniProtKB/TrEMBL
  A6KG13 ENTREZGENE, UniProtKB/TrEMBL
  GL8D1_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q7TP03_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-03-30 Glt8d1  glycosyltransferase 8 domain containing 1  MGC94018  glycosyltransferase AD-017  Symbol and Name updated 1299863 APPROVED
2005-07-29 MGC94018  glycosyltransferase AD-017      Symbol and Name status set to provisional 70820 PROVISIONAL