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Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | SIDT2 | Human | Lung Neoplasms | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:27935865 | |
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Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | SIDT2 | Human | Lung Neoplasms | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:27935865 | |
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# | Reference Title | Reference Citation |
1. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
2. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:10810093 | PMID:12477932 | PMID:12975309 | PMID:14702039 | PMID:15340161 | PMID:16303743 | PMID:17081983 | PMID:17897319 | PMID:19913121 | PMID:20379614 | PMID:20628086 | PMID:21873635 |
PMID:22810586 | PMID:26186194 | PMID:27046251 | PMID:27846365 | PMID:27987306 | PMID:28277980 | PMID:28514442 | PMID:28785058 | PMID:29752955 | PMID:30382898 | PMID:33066450 | PMID:33961781 |
PMID:34233476 | PMID:34549712 | PMID:34781815 | PMID:34800582 | PMID:36678241 | PMID:37202201 | PMID:37322007 | PMID:37830567 |
SIDT2 (Homo sapiens - human) |
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Sidt2 (Mus musculus - house mouse) |
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Sidt2 (Rattus norvegicus - Norway rat) |
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Sidt2 (Chinchilla lanigera - long-tailed chinchilla) |
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SIDT2 (Pan paniscus - bonobo/pygmy chimpanzee) |
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SIDT2 (Canis lupus familiaris - dog) |
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Sidt2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SIDT2 (Sus scrofa - pig) |
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SIDT2 (Chlorocebus sabaeus - green monkey) |
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Sidt2 (Heterocephalus glaber - naked mole-rat) |
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Variants in SIDT2
48 total Variants ![]() |
Name | Type | Condition(s) | Position(s) | Clinical significance |
GRCh38/hg38 11q23.3-25(chr11:116851395-134998513)x3 | copy number gain | See cases [RCV000050331] | Chr11:116851395..134998513 [GRCh38] Chr11:116722111..134868407 [GRCh37] Chr11:116227321..134373617 [NCBI36] Chr11:11q23.3-25 |
pathogenic |
GRCh38/hg38 11q23.2-23.3(chr11:113444446-120648921)x3 | copy number gain | See cases [RCV000050627] | Chr11:113444446..120648921 [GRCh38] Chr11:113315168..120519630 [GRCh37] Chr11:112820378..120024840 [NCBI36] Chr11:11q23.2-23.3 |
pathogenic |
GRCh38/hg38 11q22.1-25(chr11:100348599-135040246)x3 | copy number gain | See cases [RCV000053638] | Chr11:100348599..135040246 [GRCh38] Chr11:100219331..134910140 [GRCh37] Chr11:99724541..134415350 [NCBI36] Chr11:11q22.1-25 |
pathogenic |
GRCh38/hg38 11q23.3(chr11:116436425-118046231)x3 | copy number gain | See cases [RCV000053640] | Chr11:116436425..118046231 [GRCh38] Chr11:116307142..117916946 [GRCh37] Chr11:115812352..117422156 [NCBI36] Chr11:11q23.3 |
pathogenic |
NM_001040455.1(SIDT2):c.2346G>A (p.Glu782=) | single nucleotide variant | Malignant melanoma [RCV000069176] | Chr11:117195825 [GRCh38] Chr11:117066541 [GRCh37] Chr11:116571751 [NCBI36] Chr11:11q23.3 |
not provided |
Single allele | deletion | Intellectual disability [RCV001293382] | Chr11:118359328..118372573 [GRCh37] Chr11:11p15.3-q23.3 |
pathogenic |
GRCh38/hg38 11q23.3-25(chr11:116851372-134998526)x3 | copy number gain | See cases [RCV000134064] | Chr11:116851372..134998526 [GRCh38] Chr11:116722088..134868420 [GRCh37] Chr11:116227298..134373630 [NCBI36] Chr11:11q23.3-25 |
pathogenic |
GRCh38/hg38 11q23.2-25(chr11:112864326-131189315)x3 | copy number gain | See cases [RCV000137582] | Chr11:112864326..131189315 [GRCh38] Chr11:112832130..131059210 [GRCh37] Chr11:112240259..130564420 [NCBI36] Chr11:11q23.2-25 |
pathogenic |
GRCh38/hg38 11q23.3(chr11:115647670-117581883)x3 | copy number gain | See cases [RCV000137585] | Chr11:115647670..117581883 [GRCh38] Chr11:115518388..117452598 [GRCh37] Chr11:115023598..116957808 [NCBI36] Chr11:11q23.3 |
uncertain significance |
GRCh38/hg38 11q23.3-25(chr11:116868935-135075271)x3 | copy number gain | See cases [RCV000137453] | Chr11:116868935..135075271 [GRCh38] Chr11:116739651..134945165 [GRCh37] Chr11:116244861..134450377 [NCBI36] Chr11:11q23.3-25 |
pathogenic|conflicting data from submitters |
GRCh38/hg38 11q23.3-25(chr11:116806268-135075271)x3 | copy number gain | See cases [RCV000138307] | Chr11:116806268..135075271 [GRCh38] Chr11:116676984..134945165 [GRCh37] Chr11:116182194..134450377 [NCBI36] Chr11:11q23.3-25 |
pathogenic |
GRCh38/hg38 11q23.3-25(chr11:116851395-134998513)x3 | copy number gain | See cases [RCV000148276] | Chr11:116851395..134998513 [GRCh38] Chr11:116722111..134868407 [GRCh37] Chr11:116227321..134373617 [NCBI36] Chr11:11q23.3-25 |
pathogenic |
GRCh37/hg19 11q23.3(chr11:115215434-120559928)x3 | copy number gain | See cases [RCV000240308] | Chr11:115215434..120559928 [GRCh37] Chr11:11q23.3 |
pathogenic |
GRCh37/hg19 11p13-q25(chr11:32799481-134938470)x3 | copy number gain | MISSED ABORTION [RCV002282973] | Chr11:32799481..134938470 [GRCh37] Chr11:11p13-q25 |
pathogenic |
GRCh37/hg19 11q23.3-25(chr11:116700253-134904063) | copy number gain | not provided [RCV000767816] | Chr11:116700253..134904063 [GRCh37] Chr11:11q23.3-25 |
pathogenic |
GRCh37/hg19 11q23.3-25(chr11:116691675-134889485) | copy number gain | not provided [RCV000767667] | Chr11:116691675..134889485 [GRCh37] Chr11:11q23.3-25 |
pathogenic |
GRCh37/hg19 11q23.3-25(chr11:116681007-134938470)x3 | copy number gain | See cases [RCV000449449] | Chr11:116681007..134938470 [GRCh37] Chr11:11q23.3-25 |
pathogenic |
GRCh37/hg19 11q23.3-25(chr11:116684163-134938470)x3 | copy number gain | See cases [RCV000447848] | Chr11:116684163..134938470 [GRCh37] Chr11:11q23.3-25 |
pathogenic |
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470) | copy number gain | See cases [RCV000511729] | Chr11:230616..134938470 [GRCh37] Chr11:11p15.5-q25 |
pathogenic |
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470)x3 | copy number gain | See cases [RCV000510881] | Chr11:230616..134938470 [GRCh37] Chr11:11p15.5-q25 |
pathogenic |
NM_001040455.2(SIDT2):c.646G>A (p.Val216Ile) | single nucleotide variant | not specified [RCV004318946] | Chr11:117182750 [GRCh38] Chr11:117053466 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1494C>T (p.Ser498=) | single nucleotide variant | not specified [RCV004286325] | Chr11:117190166 [GRCh38] Chr11:117060882 [GRCh37] Chr11:11q23.3 |
likely benign |
NM_001040455.2(SIDT2):c.451A>G (p.Met151Val) | single nucleotide variant | not specified [RCV004281979] | Chr11:117181952 [GRCh38] Chr11:117052668 [GRCh37] Chr11:11q23.3 |
uncertain significance |
GRCh37/hg19 11q23.3-25(chr11:116681007-134938470)x3 | copy number gain | See cases [RCV000512291] | Chr11:116681007..134938470 [GRCh37] Chr11:11q23.3-25 |
pathogenic |
GRCh37/hg19 11q23.3-25(chr11:116681007-134938470)x3 | copy number gain | not provided [RCV000683373] | Chr11:116681007..134938470 [GRCh37] Chr11:11q23.3-25 |
pathogenic |
GRCh37/hg19 11q23.3(chr11:116669751-120979377)x3 | copy number gain | not provided [RCV000683365] | Chr11:116669751..120979377 [GRCh37] Chr11:11q23.3 |
likely pathogenic |
Single allele | deletion | Short stature [RCV001003892] | Chr11:114433313..131230466 [GRCh37] Chr11:11q23.2-25 |
likely pathogenic |
GRCh37/hg19 11p15.5-q25(chr11:198510-134934063)x3 | copy number gain | not provided [RCV000737348] | Chr11:198510..134934063 [GRCh37] Chr11:11p15.5-q25 |
pathogenic |
GRCh37/hg19 11q23.3-25(chr11:116697066-134934063)x3 | copy number gain | not provided [RCV000737686] | Chr11:116697066..134934063 [GRCh37] Chr11:11q23.3-25 |
pathogenic |
GRCh37/hg19 11p15.5-q25(chr11:70864-134938470)x3 | copy number gain | not provided [RCV000749874] | Chr11:70864..134938470 [GRCh37] Chr11:11p15.5-q25 |
pathogenic |
NM_001040455.2(SIDT2):c.963-6A>G | single nucleotide variant | not provided [RCV000971787] | Chr11:117186578 [GRCh38] Chr11:117057294 [GRCh37] Chr11:11q23.3 |
benign |
NM_001040455.2(SIDT2):c.1923C>T (p.His641=) | single nucleotide variant | not provided [RCV000960124] | Chr11:117192304 [GRCh38] Chr11:117063020 [GRCh37] Chr11:11q23.3 |
benign |
NM_001040455.2(SIDT2):c.1892C>T (p.Thr631Met) | single nucleotide variant | not provided [RCV000960123] | Chr11:117192273 [GRCh38] Chr11:117062989 [GRCh37] Chr11:11q23.3 |
benign |
NM_001040455.2(SIDT2):c.1162C>T (p.Arg388Cys) | single nucleotide variant | not specified [RCV004295945] | Chr11:117188710 [GRCh38] Chr11:117059426 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NC_000011.9:g.104288964_134937416dup | duplication | Distal trisomy 11q [RCV001250234] | Chr11:104288964..134937416 [GRCh37] Chr11:11q22.3-25 |
pathogenic |
NM_001040455.2(SIDT2):c.1108G>A (p.Asp370Asn) | single nucleotide variant | not specified [RCV004295242] | Chr11:117187648 [GRCh38] Chr11:117058364 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NC_000011.9:g.(?_116691583)_(121500272_?)dup | duplication | Combined immunodeficiency due to CD3gamma deficiency [RCV003119252]|Immunodeficiency 18 [RCV003109226]|Immunodeficiency 19 [RCV003109224]|Inflammatory bowel disease 28 [RCV003109225]|Isolated microphthalmia 5 [RCV003119251]|RASopathy [RCV003119250] | Chr11:116691583..121500272 [GRCh37] Chr11:11q23.3-24.1 |
uncertain significance |
GRCh37/hg19 11q14.1-23.3(chr11:85422071-118022671)x1 | copy number loss | not provided [RCV001832892] | Chr11:85422071..118022671 [GRCh37] Chr11:11q14.1-23.3 |
uncertain significance |
GRCh37/hg19 11q23.1-24.3(chr11:112375478-128785742)x3 | copy number gain | not provided [RCV001829187] | Chr11:112375478..128785742 [GRCh37] Chr11:11q23.1-24.3 |
pathogenic |
NC_000011.9:g.(?_116660844)_(121500272_?)dup | duplication | not provided [RCV003107886] | Chr11:116660844..121500272 [GRCh37] Chr11:11q23.3-24.1 |
uncertain significance |
NC_000011.9:g.(?_116660844)_(117870356_?)del | deletion | Nephronophthisis 15 [RCV003119459]|not provided [RCV003109683] | Chr11:116660844..117870356 [GRCh37] Chr11:11q23.3 |
pathogenic|uncertain significance|no classifications from unflagged records |
NM_001040455.2(SIDT2):c.1996C>T (p.Arg666Cys) | single nucleotide variant | not specified [RCV004239233] | Chr11:117192588 [GRCh38] Chr11:117063304 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.565G>A (p.Val189Met) | single nucleotide variant | not specified [RCV004164347] | Chr11:117182567 [GRCh38] Chr11:117053283 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.233C>T (p.Ala78Val) | single nucleotide variant | not specified [RCV004144870] | Chr11:117181465 [GRCh38] Chr11:117052181 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1949C>T (p.Thr650Met) | single nucleotide variant | not specified [RCV004090312] | Chr11:117192330 [GRCh38] Chr11:117063046 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.358C>T (p.Pro120Ser) | single nucleotide variant | not specified [RCV004209502] | Chr11:117181859 [GRCh38] Chr11:117052575 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1183A>G (p.Thr395Ala) | single nucleotide variant | not specified [RCV004229470] | Chr11:117188731 [GRCh38] Chr11:117059447 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1020C>A (p.His340Gln) | single nucleotide variant | not specified [RCV004085237] | Chr11:117187382 [GRCh38] Chr11:117058098 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.189G>C (p.Glu63Asp) | single nucleotide variant | not specified [RCV004238863] | Chr11:117181421 [GRCh38] Chr11:117052137 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.524A>C (p.Lys175Thr) | single nucleotide variant | not specified [RCV004138137] | Chr11:117182526 [GRCh38] Chr11:117053242 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.703C>T (p.Arg235Cys) | single nucleotide variant | not specified [RCV004177520] | Chr11:117183779 [GRCh38] Chr11:117054495 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1882A>C (p.Lys628Gln) | single nucleotide variant | not specified [RCV004212701] | Chr11:117192263 [GRCh38] Chr11:117062979 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.2011G>A (p.Val671Met) | single nucleotide variant | not specified [RCV004220902] | Chr11:117192603 [GRCh38] Chr11:117063319 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.306G>A (p.Met102Ile) | single nucleotide variant | not specified [RCV004279460] | Chr11:117181807 [GRCh38] Chr11:117052523 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.256C>A (p.Gln86Lys) | single nucleotide variant | not specified [RCV004250624] | Chr11:117181488 [GRCh38] Chr11:117052204 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.638A>G (p.Asp213Gly) | single nucleotide variant | not specified [RCV004267070] | Chr11:117182742 [GRCh38] Chr11:117053458 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.2371G>A (p.Asp791Asn) | single nucleotide variant | not specified [RCV004274702] | Chr11:117195850 [GRCh38] Chr11:117066566 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1620A>T (p.Glu540Asp) | single nucleotide variant | not specified [RCV004287478] | Chr11:117190625 [GRCh38] Chr11:117061341 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1815C>T (p.Ser605=) | single nucleotide variant | not specified [RCV004361634] | Chr11:117191957 [GRCh38] Chr11:117062673 [GRCh37] Chr11:11q23.3 |
likely benign |
NM_001040455.2(SIDT2):c.138G>C (p.Glu46Asp) | single nucleotide variant | not specified [RCV004346493] | Chr11:117179401 [GRCh38] Chr11:117050117 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1985C>T (p.Ser662Leu) | single nucleotide variant | not specified [RCV004352779] | Chr11:117192577 [GRCh38] Chr11:117063293 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.622C>G (p.Pro208Ala) | single nucleotide variant | not specified [RCV004341563] | Chr11:117182726 [GRCh38] Chr11:117053442 [GRCh37] Chr11:11q23.3 |
uncertain significance |
Single allele | duplication | not provided [RCV003448710] | Chr11:102134973..134945611 [GRCh37] Chr11:11q22.2-25 |
pathogenic |
NM_001040455.2(SIDT2):c.1149C>T (p.Tyr383=) | single nucleotide variant | not provided [RCV003398151] | Chr11:117187689 [GRCh38] Chr11:117058405 [GRCh37] Chr11:11q23.3 |
likely benign |
NM_001040455.2(SIDT2):c.2128C>T (p.Arg710Cys) | single nucleotide variant | not provided [RCV003398152] | Chr11:117193175 [GRCh38] Chr11:117063891 [GRCh37] Chr11:11q23.3 |
likely benign |
GRCh37/hg19 11q23.3-25(chr11:116683755-134937416)x3 | copy number gain | not provided [RCV004442759] | Chr11:116683755..134937416 [GRCh37] Chr11:11q23.3-25 |
pathogenic |
NM_001040455.2(SIDT2):c.394G>A (p.Val132Met) | single nucleotide variant | not specified [RCV004453499] | Chr11:117181895 [GRCh38] Chr11:117052611 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.992T>C (p.Ile331Thr) | single nucleotide variant | not specified [RCV004453502] | Chr11:117186613 [GRCh38] Chr11:117057329 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.457G>A (p.Asp153Asn) | single nucleotide variant | not specified [RCV004453500] | Chr11:117181958 [GRCh38] Chr11:117052674 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1163G>A (p.Arg388His) | single nucleotide variant | not specified [RCV004453496] | Chr11:117188711 [GRCh38] Chr11:117059427 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.784T>G (p.Phe262Val) | single nucleotide variant | not specified [RCV004453501] | Chr11:117183860 [GRCh38] Chr11:117054576 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1423G>C (p.Val475Leu) | single nucleotide variant | not specified [RCV004453497] | Chr11:117189955 [GRCh38] Chr11:117060671 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.392A>C (p.Tyr131Ser) | single nucleotide variant | not specified [RCV004453498] | Chr11:117181893 [GRCh38] Chr11:117052609 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1187G>A (p.Arg396Gln) | single nucleotide variant | not specified [RCV004669783] | Chr11:117188735 [GRCh38] Chr11:117059451 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1762G>A (p.Gly588Arg) | single nucleotide variant | not specified [RCV004669784] | Chr11:117191904 [GRCh38] Chr11:117062620 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1057C>T (p.Pro353Ser) | single nucleotide variant | not specified [RCV004669785] | Chr11:117187419 [GRCh38] Chr11:117058135 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.1418C>T (p.Thr473Met) | single nucleotide variant | not specified [RCV004669786] | Chr11:117189400 [GRCh38] Chr11:117060116 [GRCh37] Chr11:11q23.3 |
uncertain significance |
NM_001040455.2(SIDT2):c.544G>A (p.Val182Met) | single nucleotide variant | not specified [RCV004676411] | Chr11:117182546 [GRCh38] Chr11:117053262 [GRCh37] Chr11:11q23.3 |
uncertain significance |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
D11S2284E |
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SHGC-146847 |
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SIDT2_9663 |
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RH18240 |
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SGC34431 |
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STS-H39887 |
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adipose tissue
|
alimentary part of gastrointestinal system
|
appendage
|
circulatory system
|
ectoderm
|
endocrine system
|
endoderm
|
entire extraembryonic component
|
exocrine system
|
hemolymphoid system
|
hepatobiliary system
|
integumental system
|
mesenchyme
|
mesoderm
|
musculoskeletal system
|
nervous system
|
renal system
|
reproductive system
|
respiratory system
|
sensory system
|
visual system
|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1204 | 2434 | 2788 | 2249 | 4952 | 1725 | 2350 | 5 | 622 | 1951 | 465 | 2268 | 7294 | 6463 | 53 | 3717 | 850 | 1739 | 1615 | 172 | 1 |
RefSeq Transcripts | NM_001040455 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
GenBank Nucleotide | AF151799 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AK075137 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK075471 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK292501 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK292974 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK301501 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK303023 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AP005018 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AY358442 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC114522 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC114959 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BX648437 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH471065 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CP068267 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
KC109742 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENST00000278951 ⟹ ENSP00000278951 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000324225 ⟹ ENSP00000314023 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000431081 ⟹ ENSP00000399635 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000524842 ⟹ ENSP00000436983 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000524988 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000525065 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000525339 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000525478 ⟹ ENSP00000435890 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000526813 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000527654 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000528397 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000529441 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000529484 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000530948 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000531255 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000531353 ⟹ ENSP00000435004 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000532062 ⟹ ENSP00000432432 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000532960 ⟹ ENSP00000431176 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000620360 ⟹ ENSP00000482762 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Ensembl Acc Id: | ENST00000628876 ⟹ ENSP00000486114 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | NM_001040455 ⟹ NP_001035545 | ||||||||||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||||||
Position: |
|
||||||||||||||||||||||||||||||||
Sequence: |
Protein RefSeqs | NP_001035545 | (Get FASTA) | NCBI Sequence Viewer |
GenBank Protein | AAD34036 | (Get FASTA) | NCBI Sequence Viewer |
AAI14523 | (Get FASTA) | NCBI Sequence Viewer | |
AAI14960 | (Get FASTA) | NCBI Sequence Viewer | |
AAQ88807 | (Get FASTA) | NCBI Sequence Viewer | |
AGC94566 | (Get FASTA) | NCBI Sequence Viewer | |
BAC11427 | (Get FASTA) | NCBI Sequence Viewer | |
BAC11641 | (Get FASTA) | NCBI Sequence Viewer | |
BAF85190 | (Get FASTA) | NCBI Sequence Viewer | |
BAF85663 | (Get FASTA) | NCBI Sequence Viewer | |
BAG63012 | (Get FASTA) | NCBI Sequence Viewer | |
BAG64149 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67283 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67284 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67285 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67286 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67287 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67288 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67289 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67290 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67291 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67292 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67293 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67294 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67295 | (Get FASTA) | NCBI Sequence Viewer | |
EAW67296 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSP00000278951.7 | ||
ENSP00000314023 | |||
ENSP00000314023.4 | |||
ENSP00000399635.2 | |||
ENSP00000431176.1 | |||
ENSP00000432432.1 | |||
ENSP00000435004.1 | |||
ENSP00000435890.1 | |||
ENSP00000436983.2 | |||
ENSP00000486114.1 | |||
GenBank Protein | Q8NBJ9 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001035545 ⟸ NM_001040455 |
- Peptide Label: | precursor |
- UniProtKB: | Q8NBY7 (UniProtKB/Swiss-Prot), Q9Y357 (UniProtKB/Swiss-Prot), Q8NBJ9 (UniProtKB/Swiss-Prot), L7X6U2 (UniProtKB/TrEMBL) |
- Sequence: |
Ensembl Acc Id: | ENSP00000482762 ⟸ ENST00000620360 |
Ensembl Acc Id: | ENSP00000435004 ⟸ ENST00000531353 |
Ensembl Acc Id: | ENSP00000432432 ⟸ ENST00000532062 |
Ensembl Acc Id: | ENSP00000431176 ⟸ ENST00000532960 |
Ensembl Acc Id: | ENSP00000314023 ⟸ ENST00000324225 |
Ensembl Acc Id: | ENSP00000486114 ⟸ ENST00000628876 |
Ensembl Acc Id: | ENSP00000399635 ⟸ ENST00000431081 |
Ensembl Acc Id: | ENSP00000436983 ⟸ ENST00000524842 |
Ensembl Acc Id: | ENSP00000435890 ⟸ ENST00000525478 |
Ensembl Acc Id: | ENSP00000278951 ⟸ ENST00000278951 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q8NBJ9-F1-model_v2 | AlphaFold | Q8NBJ9 | 1-832 | view protein structure |
RGD ID: | 6789364 | ||||||||
Promoter ID: | HG_KWN:14271 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, K562, Lymphoblastoid, NB4 | ||||||||
Transcripts: | ENST00000278951, ENST00000392956, NM_001040455, UC001PQG.1, UC001PQI.1 | ||||||||
Position: |
|
RGD ID: | 6789360 | ||||||||
Promoter ID: | HG_KWN:14272 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | CD4+TCell, CD4+TCell_12Hour | ||||||||
Transcripts: | UC001PQJ.1 | ||||||||
Position: |
|
RGD ID: | 7222227 | ||||||||
Promoter ID: | EPDNEW_H16859 | ||||||||
Type: | initiation region | ||||||||
Name: | SIDT2_1 | ||||||||
Description: | SID1 transmembrane family member 2 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_H16861 EPDNEW_H16860 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
RGD ID: | 7222231 | ||||||||
Promoter ID: | EPDNEW_H16860 | ||||||||
Type: | initiation region | ||||||||
Name: | SIDT2_2 | ||||||||
Description: | SID1 transmembrane family member 2 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_H16859 EPDNEW_H16861 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
RGD ID: | 7222229 | ||||||||
Promoter ID: | EPDNEW_H16861 | ||||||||
Type: | initiation region | ||||||||
Name: | SIDT2_3 | ||||||||
Description: | SID1 transmembrane family member 2 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_H16859 EPDNEW_H16860 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
Database | Acc Id | Source(s) |
AGR Gene | HGNC:24272 | AgrOrtholog |
COSMIC | SIDT2 | COSMIC |
Ensembl Genes | ENSG00000149577 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENST00000278951.11 | UniProtKB/TrEMBL |
ENST00000324225 | ENTREZGENE | |
ENST00000324225.9 | UniProtKB/Swiss-Prot | |
ENST00000431081.6 | UniProtKB/TrEMBL | |
ENST00000524842.5 | UniProtKB/TrEMBL | |
ENST00000525478.5 | UniProtKB/TrEMBL | |
ENST00000531353.1 | UniProtKB/TrEMBL | |
ENST00000532062.1 | UniProtKB/TrEMBL | |
ENST00000532960.5 | UniProtKB/TrEMBL | |
ENST00000628876.2 | UniProtKB/TrEMBL | |
GTEx | ENSG00000149577 | GTEx |
HGNC ID | HGNC:24272 | ENTREZGENE |
Human Proteome Map | SIDT2 | Human Proteome Map |
InterPro | SID1_TM_fam | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
KEGG Report | hsa:51092 | UniProtKB/Swiss-Prot |
NCBI Gene | 51092 | ENTREZGENE |
OMIM | 617551 | OMIM |
PANTHER | PTHR12185 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SID1 TRANSMEMBRANE FAMILY MEMBER 2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | SID-1_RNA_chan | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PharmGKB | PA134910333 | PharmGKB |
UniProt | C9JBG5_HUMAN | UniProtKB/TrEMBL |
E9PMC3_HUMAN | UniProtKB/TrEMBL | |
E9PME7_HUMAN | UniProtKB/TrEMBL | |
E9PPN9_HUMAN | UniProtKB/TrEMBL | |
F5H8L4_HUMAN | UniProtKB/TrEMBL | |
G3V172_HUMAN | UniProtKB/TrEMBL | |
H0YEI3_HUMAN | UniProtKB/TrEMBL | |
L7X6U2 | ENTREZGENE, UniProtKB/TrEMBL | |
Q1RMF0_HUMAN | UniProtKB/TrEMBL | |
Q24JR2_HUMAN | UniProtKB/TrEMBL | |
Q8NBJ9 | ENTREZGENE | |
Q8NBY7 | ENTREZGENE | |
Q9Y357 | ENTREZGENE | |
SIDT2_HUMAN | UniProtKB/Swiss-Prot | |
UniProt Secondary | Q8NBY7 | UniProtKB/Swiss-Prot |
Q9Y357 | UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2015-11-24 | SIDT2 | SID1 transmembrane family member 2 | SID1 transmembrane family, member 2 | Symbol and/or name change | 5135510 | APPROVED |