TSBP1 (testis expressed basic protein 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: TSBP1 (testis expressed basic protein 1) Homo sapiens
Analyze
Symbol: TSBP1
Name: testis expressed basic protein 1
RGD ID: 1346663
HGNC Page HGNC:13922
Description: Located in nucleus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C6orf10; chromosome 6 open reading frame 10; testis specific basic protein; testis-expressed basic protein 1; TSBP; uncharacterized protein C6orf10
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38632,292,698 - 32,371,903 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl632,288,526 - 32,371,907 (-)EnsemblGRCh38hg38GRCh38
GRCh37632,260,475 - 32,339,680 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36632,368,453 - 32,447,634 (-)NCBINCBI36Build 36hg18NCBI36
Build 34632,368,469 - 32,447,634NCBI
Celera633,827,603 - 33,906,430 (-)NCBICelera
Cytogenetic Map6p21.32NCBI
HuRef632,014,824 - 32,093,640 (-)NCBIHuRef
CHM1_1632,262,950 - 32,342,143 (-)NCBICHM1_1
T2T-CHM13v2.0632,145,999 - 32,224,841 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
nucleus  (HDA)

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8125298   PMID:10803852   PMID:12477932   PMID:12509440   PMID:14574404   PMID:15489334   PMID:18445777   PMID:18576341   PMID:18941528   PMID:19116923   PMID:19143821   PMID:19458352  
PMID:19460752   PMID:19680446   PMID:19851445   PMID:20200978   PMID:20453842   PMID:20549515   PMID:20587610   PMID:20595679   PMID:20639878   PMID:20662065   PMID:21323541   PMID:21326295  
PMID:21408207   PMID:21505073   PMID:21630459   PMID:21779181   PMID:21804548   PMID:21900946   PMID:22457343   PMID:22589738   PMID:22703881   PMID:22751097   PMID:23042114   PMID:23251661  
PMID:23321320   PMID:23535732   PMID:23870195   PMID:23918589   PMID:24282030   PMID:24292274   PMID:24925725   PMID:27503909   PMID:30252044   PMID:33022050   PMID:34656742   PMID:35271311  
PMID:38042215   PMID:38334954  


Genomics

Comparative Map Data
TSBP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38632,292,698 - 32,371,903 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl632,288,526 - 32,371,907 (-)EnsemblGRCh38hg38GRCh38
GRCh37632,260,475 - 32,339,680 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36632,368,453 - 32,447,634 (-)NCBINCBI36Build 36hg18NCBI36
Build 34632,368,469 - 32,447,634NCBI
Celera633,827,603 - 33,906,430 (-)NCBICelera
Cytogenetic Map6p21.32NCBI
HuRef632,014,824 - 32,093,640 (-)NCBIHuRef
CHM1_1632,262,950 - 32,342,143 (-)NCBICHM1_1
T2T-CHM13v2.0632,145,999 - 32,224,841 (-)NCBIT2T-CHM13v2.0
Tsbp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391734,617,749 - 34,679,708 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1734,617,794 - 34,679,708 (+)EnsemblGRCm39 Ensembl
GRCm381734,398,767 - 34,460,734 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,398,820 - 34,460,734 (+)EnsemblGRCm38mm10GRCm38
MGSCv371734,535,765 - 34,597,679 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,024,335 - 34,068,780 (+)NCBIMGSCv36mm8
Celera1737,167,318 - 37,229,216 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.0NCBI
Tsbp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8204,411,926 - 4,469,214 (-)NCBIGRCr8
mRatBN7.2204,410,002 - 4,467,284 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl204,410,004 - 4,457,053 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx205,170,226 - 5,219,942 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0204,531,964 - 4,581,678 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0205,005,225 - 5,052,249 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0204,178,655 - 4,235,947 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl204,178,686 - 4,235,950 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0206,258,025 - 6,315,303 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4204,532,358 - 4,579,409 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera206,012,617 - 6,059,663 (-)NCBICelera
Cytogenetic Map20p12NCBI
Tsbp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955437830,178 - 915,199 (-)NCBIChiLan1.0ChiLan1.0
TSBP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2546,755,541 - 46,839,649 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1642,716,834 - 42,801,131 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0631,939,658 - 32,021,872 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1632,818,649 - 32,899,107 (-)NCBIpanpan1.1PanPan1.1panPan2
TSBP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1121,749,856 - 1,920,630 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha121,881,267 - 2,066,496 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0122,084,816 - 2,194,622 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1121,736,871 - 1,926,564 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0121,806,337 - 2,006,128 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0121,872,898 - 2,072,882 (-)NCBIUU_Cfam_GSD_1.0
Tsbp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494636,827,182 - 36,915,025 (-)NCBIHiC_Itri_2
TSBP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1724,406,241 - 24,409,937 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2728,417,132 - 28,483,729 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TSBP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11739,680,157 - 39,743,399 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604432,186,563 - 32,259,174 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in TSBP1
60 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_006781.4(C6orf10):c.502C>T (p.Pro168Ser) single nucleotide variant Malignant melanoma [RCV000061398] Chr6:32330601 [GRCh38]
Chr6:32298378 [GRCh37]
Chr6:32406356 [NCBI36]
Chr6:6p21.32		 not provided
GRCh38/hg38 6p25.3-12.3(chr6:156974-46789291)x3 copy number gain See cases [RCV000143497] Chr6:156974..46789291 [GRCh38]
Chr6:156974..46757028 [GRCh37]
Chr6:101974..46864987 [NCBI36]
Chr6:6p25.3-12.3		 pathogenic
Single allele complex Breast ductal adenocarcinoma [RCV000207075] Chr6:32188383..32629802 [GRCh37]
Chr6:6p21.32		 uncertain significance
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482)x3 copy number gain See cases [RCV000512067] Chr6:156975..170919482 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482) copy number gain See cases [RCV000510595] Chr6:156975..170919482 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6p25.3-q27(chr6:60107-171054786)x3 copy number gain not provided [RCV000745400] Chr6:60107..171054786 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6p25.3-q27(chr6:108666-170980171)x3 copy number gain not provided [RCV000745403] Chr6:108666..170980171 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6p25.3-q27(chr6:165632-170919470)x3 copy number gain not provided [RCV000745404] Chr6:165632..170919470 [GRCh37]
Chr6:6p25.3-q27		 pathogenic
GRCh37/hg19 6p22.1-q14.1(chr6:29455465-81447367) copy number gain not provided [RCV000767714] Chr6:29455465..81447367 [GRCh37]
Chr6:6p22.1-q14.1		 pathogenic
GRCh37/hg19 6p21.33-21.32(chr6:32027371-32448599)x3 copy number gain not provided [RCV000846873] Chr6:32027371..32448599 [GRCh37]
Chr6:6p21.33-21.32		 uncertain significance
GRCh37/hg19 6p21.33-21.31(chr6:31036397-34088832)x3 copy number gain not provided [RCV001005791] Chr6:31036397..34088832 [GRCh37]
Chr6:6p21.33-21.31		 likely pathogenic
GRCh37/hg19 6p21.33-21.32(chr6:31916915-32278000)x3 copy number gain not provided [RCV001005792] Chr6:31916915..32278000 [GRCh37]
Chr6:6p21.33-21.32		 uncertain significance
NC_000006.11:g.(?_30695893)_(36953949_?)dup duplication Proteasome-associated autoinflammatory syndrome 1 [RCV003113679] Chr6:30695893..36953949 [GRCh37]
Chr6:6p21.33-21.2		 uncertain significance
NC_000006.11:g.(?_32148920)_(36953949_?)dup duplication not provided [RCV003154914] Chr6:32148920..36953949 [GRCh37]
Chr6:6p21.32-21.2		 uncertain significance
NM_001286474.2(TSBP1):c.1114G>A (p.Gly372Ser) single nucleotide variant not specified [RCV004476372] Chr6:32293553 [GRCh38]
Chr6:32261330 [GRCh37]
Chr6:6p21.32		 uncertain significance
NM_001286474.2(TSBP1):c.933G>A (p.Met311Ile) single nucleotide variant not specified [RCV004476373] Chr6:32293734 [GRCh38]
Chr6:32261511 [GRCh37]
Chr6:6p21.32		 uncertain significance
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:931
Count of miRNA genes:411
Interacting mature miRNAs:435
Transcripts:ENST00000375007, ENST00000375015, ENST00000442822, ENST00000447241, ENST00000527965, ENST00000532023, ENST00000533191, ENST00000534588
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597251481GWAS1347555_Hseropositivity measurement QTL GWAS1347555 (human)2e-10seropositivity measurement63237157132371572Human
597451679GWAS1547753_Hstaphylococcus seropositivity QTL GWAS1547753 (human)2e-12staphylococcus seropositivity63232031232320313Human
597452692GWAS1548766_Hstreptococcus seropositivity QTL GWAS1548766 (human)1e-09streptococcus seropositivity63233489532334896Human
1298458BW9_HBody weight QTL 9 (human)2.70.0002Body fat amount6691196032911960Human
1358854MULTSCL4_HMultiple sclerosis susceptibility QTL 4 (human)Multiple sclerosis susceptibility6691196032911960Human
597251467GWAS1347541_Hstaphylococcus seropositivity QTL GWAS1347541 (human)6e-16staphylococcus seropositivity63236605032366051Human
597371784GWAS1467858_Henergy intake QTL GWAS1467858 (human)0.000002energy intake63235186032351861Human
597330818GWAS1426892_Hrheumatoid arthritis, hypothyroidism QTL GWAS1426892 (human)2e-19rheumatoid arthritis, hypothyroidism63233213132332132Human
597251456GWAS1347530_Hstaphylococcus seropositivity QTL GWAS1347530 (human)2e-18staphylococcus seropositivity63229347532293476Human
597316480GWAS1412554_HBMI-adjusted waist circumference QTL GWAS1412554 (human)4e-09body size trait (VT:0100005)63233831332338314Human
1358857MULTSCL19_HMultiple sclerosis susceptibility QTL 19 (human)Multiple sclerosis susceptibility61958431145584311Human
407159385GWAS808361_HBMI-adjusted waist-hip ratio QTL GWAS808361 (human)3e-16BMI-adjusted waist-hip ratio63237120932371210Human
596987275GWAS1106794_Hbilirubin measurement QTL GWAS1106794 (human)1e-09bilirubin measurement63231747132317472Human
597252025GWAS1348099_Hstreptococcus seropositivity QTL GWAS1348099 (human)6e-14streptococcus seropositivity63229347532293476Human
407012963GWAS661939_Hmembranous glomerulonephritis QTL GWAS661939 (human)5e-71membranous glomerulonephritis63229347532293476Human
597515196GWAS1611270_Hsarcoidosis QTL GWAS1611270 (human)0.000005sarcoidosis63233607132336072Human
597169594GWAS1265668_HAutoimmune Hepatitis QTL GWAS1265668 (human)7e-09Autoimmune Hepatitis63230437932304380Human
597169595GWAS1265669_Hcirrhosis of liver QTL GWAS1265669 (human)2e-11cirrhosis of liver63237091832370919Human
597249981GWAS1346055_Hstreptococcus seropositivity QTL GWAS1346055 (human)1e-13streptococcus seropositivity63236605032366051Human
597517240GWAS1613314_Hrheumatoid arthritis, hypothyroidism QTL GWAS1613314 (human)1e-36rheumatoid arthritis, hypothyroidism63237172132371722Human
597274559GWAS1370633_Halpha-2-macroglobulin receptor-associated protein measurement QTL GWAS1370633 (human)8e-33alpha-2-macroglobulin receptor-associated protein measurement63236477332364774Human
597251519GWAS1347593_Henterobacter phage virus seropositivity QTL GWAS1347593 (human)1e-11enterobacter phage virus seropositivity63237157132371572Human
1643569GLUCO21_HGlucose level QTL 21 (human)0.021Glucose levelnon-insulin-dependent6691196032911960Human
597412274GWAS1508348_Hatopic asthma QTL GWAS1508348 (human)5e-10atopic asthma63231323932313240Human
597461937GWAS1558011_HEczematoid dermatitis QTL GWAS1558011 (human)1e-15Eczematoid dermatitis63232809732328098Human
597374388GWAS1470462_Hdrug-induced liver injury QTL GWAS1470462 (human)7e-25drug-induced liver injury63233820232338203Human
597610925GWAS1667785_Hneutrophil count QTL GWAS1667785 (human)4e-31neutrophil quantity (VT:0000222)blood neutrophil count (CMO:0000030)63233365032333651Human
597397928GWAS1494002_Hvaginal microbiome measurement QTL GWAS1494002 (human)0.000002vaginal microbiome measurement63234979132349792Human
597588391GWAS1645251_Hulcerative colitis QTL GWAS1645251 (human)2e-29ulcerative colitis63233365032333651Human
597252005GWAS1348079_Hanimal allergen seropositivity QTL GWAS1348079 (human)2e-11animal allergen seropositivity63232834032328341Human
597397927GWAS1494001_Hvaginal microbiome measurement QTL GWAS1494001 (human)0.000002vaginal microbiome measurement63233593032335931Human
596966353GWAS1085872_HBMI-adjusted waist-hip ratio QTL GWAS1085872 (human)3e-16BMI-adjusted waist-hip ratio63237120932371210Human
596966355GWAS1085874_HBMI-adjusted waist circumference QTL GWAS1085874 (human)8e-14BMI-adjusted waist circumference63237120932371210Human
597303760GWAS1399834_HBMI-adjusted hip circumference QTL GWAS1399834 (human)8e-09BMI-adjusted hip circumferencehip circumference (CMO:0000014)63231281432312815Human
596967363GWAS1086882_Hrheumatoid arthritis, irritable bowel syndrome QTL GWAS1086882 (human)4e-15rheumatoid arthritis, irritable bowel syndrome63237129932371300Human
597598147GWAS1655007_Hlymphocyte count QTL GWAS1655007 (human)6e-33lymphocyte countblood lymphocyte count (CMO:0000031)63233365032333651Human
597249990GWAS1346064_Hklebsiella phage virus seropositivity QTL GWAS1346064 (human)5e-09klebsiella phage virus seropositivity63237157132371572Human
597063671GWAS1159745_Hmosquito bite reaction itch intensity measurement, mosquito bite reaction size measurement QTL GWAS1159745 (human)2e-08body size trait (VT:0100005)63231085832310859Human
597462525GWAS1558599_Henterobacter phage virus seropositivity QTL GWAS1558599 (human)2e-09enterobacter phage virus seropositivity63231810232318103Human
597462526GWAS1558600_Henterobacter phage virus seropositivity QTL GWAS1558600 (human)4e-08enterobacter phage virus seropositivity63231810232318103Human
597081076GWAS1177150_Hlymphocyte count QTL GWAS1177150 (human)3e-49lymphocyte countblood lymphocyte count (CMO:0000031)63233365032333651Human
597590012GWAS1646872_Hileostomy QTL GWAS1646872 (human)2e-22ileostomy63233365032333651Human
597363190GWAS1459264_Hreticulocyte count QTL GWAS1459264 (human)3e-21reticulocyte quantity (VT:0003135)total reticulocyte count (CMO:0003020)63231363532313636Human
597476849GWAS1572923_Hsystemic lupus erythematosus QTL GWAS1572923 (human)4e-19systemic lupus erythematosus63235369632353697Human
597399542GWAS1495616_HBMI-adjusted hip circumference QTL GWAS1495616 (human)2e-12BMI-adjusted hip circumferencehip circumference (CMO:0000014)63236937332369389Human
597399541GWAS1495615_HBMI-adjusted hip circumference QTL GWAS1495615 (human)5e-08BMI-adjusted hip circumferencehip circumference (CMO:0000014)63232796732327968Human
597434862GWAS1530936_HBMI-adjusted waist-hip ratio QTL GWAS1530936 (human)3e-08body size trait (VT:0100005)63236937332369389Human
597477871GWAS1573945_Hcomparative body size at age 10, self-reported QTL GWAS1573945 (human)3e-18comparative body size at age 10, self-reported63237050632370507Human
597507049GWAS1603123_Hhyperthyroidism QTL GWAS1603123 (human)5e-09hyperthyroidism63233919332339194Human
597047779GWAS1143853_Hchildhood onset asthma QTL GWAS1143853 (human)6e-11childhood onset asthma63233746132337462Human
597379566GWAS1475640_Hjuvenile idiopathic arthritis QTL GWAS1475640 (human)2e-10juvenile idiopathic arthritis63235377732353778Human
597451242GWAS1547316_Hrheumatoid arthritis QTL GWAS1547316 (human)1e-299rheumatoid arthritis63231507732315078Human
596965356GWAS1084875_Hpsoriasis QTL GWAS1084875 (human)2e-20psoriasis63236164632361647Human
597331427GWAS1427501_Hrheumatoid arthritis, hypothyroidism QTL GWAS1427501 (human)1e-66rheumatoid arthritis, hypothyroidism63229775132297752Human
596967406GWAS1086925_Hcomplement C4 measurement QTL GWAS1086925 (human)1e-39complement C4 measurement63234815232348153Human
596962287GWAS1081806_Hatopic eczema QTL GWAS1081806 (human)4e-13atopic eczema63237129932371300Human
597047785GWAS1143859_Hchildhood onset asthma QTL GWAS1143859 (human)3e-10childhood onset asthma63231429132314292Human
597450723GWAS1546797_Hstaphylococcus seropositivity QTL GWAS1546797 (human)6e-11staphylococcus seropositivity63234243432342435Human
597046039GWAS1142113_Hatopic asthma QTL GWAS1142113 (human)3e-11atopic asthma63234368232343683Human
597588252GWAS1645112_HCrohn's disease QTL GWAS1645112 (human)4e-15intestine integrity trait (VT:0010554)63233365032333651Human
597454616GWAS1550690_Hplant allergen seropositivity QTL GWAS1550690 (human)4e-09plant allergen seropositivity63234243432342435Human
597489944GWAS1586018_HBMI-adjusted hip circumference QTL GWAS1586018 (human)1e-22BMI-adjusted hip circumferencehip circumference (CMO:0000014)63236937332369389Human
597384478GWAS1480552_Hallergic disease QTL GWAS1480552 (human)7e-17allergic disease63233820232338203Human
597489940GWAS1586014_HBMI-adjusted hip circumference QTL GWAS1586014 (human)2e-10BMI-adjusted hip circumferencehip circumference (CMO:0000014)63232580132325802Human
597489941GWAS1586015_HBMI-adjusted hip circumference QTL GWAS1586015 (human)4e-08BMI-adjusted hip circumferencehip circumference (CMO:0000014)63232765132327652Human
597489942GWAS1586016_HBMI-adjusted hip circumference QTL GWAS1586016 (human)7e-15BMI-adjusted hip circumferencehip circumference (CMO:0000014)63232796732327968Human
597452054GWAS1548128_Hstreptococcus seropositivity QTL GWAS1548128 (human)3e-12streptococcus seropositivity63233489532334896Human
597489943GWAS1586017_HBMI-adjusted hip circumference QTL GWAS1586017 (human)1e-08BMI-adjusted hip circumferencehip circumference (CMO:0000014)63234588232345883Human
597512464GWAS1608538_Hprotein measurement QTL GWAS1608538 (human)8e-14protein measurement63232243132322432Human
597395723GWAS1491797_HBMI-adjusted waist circumference QTL GWAS1491797 (human)2e-08body size trait (VT:0100005)63232765132327652Human
597425419GWAS1521493_HInguinal hernia QTL GWAS1521493 (human)3e-08Inguinal hernia63232787532327876Human
597491981GWAS1588055_Hperiodontitis QTL GWAS1588055 (human)3e-08periodontitis63235575232355753Human
597425418GWAS1521492_HInguinal hernia QTL GWAS1521492 (human)4e-08Inguinal hernia63232117532321176Human
597425417GWAS1521491_HInguinal hernia QTL GWAS1521491 (human)4e-08Inguinal hernia63230710532307106Human
597515535GWAS1611609_Hbody mass index QTL GWAS1611609 (human)4e-17body mass indexbody mass index (BMI) (CMO:0000105)63232243132322432Human
597425416GWAS1521490_HInguinal hernia QTL GWAS1521490 (human)4e-08Inguinal hernia63230168032301681Human
597464328GWAS1560402_Hresponse to vaccine QTL GWAS1560402 (human)8e-08response to vaccine63231156332311564Human
597251852GWAS1347926_Hstreptococcus seropositivity QTL GWAS1347926 (human)2e-11streptococcus seropositivity63229347532293476Human
407261907GWAS910883_Hgenomic measurement QTL GWAS910883 (human)0.0000006genomic measurement63233365032333651Human
597425422GWAS1521496_HInguinal hernia QTL GWAS1521496 (human)3e-08Inguinal hernia63235778532357786Human
597425421GWAS1521495_HInguinal hernia QTL GWAS1521495 (human)3e-08Inguinal hernia63234773432347735Human
597425420GWAS1521494_HInguinal hernia QTL GWAS1521494 (human)2e-08Inguinal hernia63233591532335916Human
597328643GWAS1424717_Hrheumatoid arthritis, hypothyroidism QTL GWAS1424717 (human)1e-300rheumatoid arthritis, hypothyroidism63234337132343372Human
407081693GWAS730669_Hdiastolic blood pressure QTL GWAS730669 (human)2e-17diastolic blood pressurediastolic blood pressure (CMO:0000005)63234308632343087Human
597328644GWAS1424718_Hrheumatoid arthritis, hypothyroidism QTL GWAS1424718 (human)1e-300rheumatoid arthritis, hypothyroidism63234496332344964Human
597371141GWAS1467215_HGraves disease QTL GWAS1467215 (human)2e-22Graves disease63236985332369854Human
597179193GWAS1275267_Hhemoglobin measurement QTL GWAS1275267 (human)4e-17hemoglobin measurementhemoglobin measurement (CMO:0000508)63231633132316332Human
597249339GWAS1345413_Hstreptococcus seropositivity QTL GWAS1345413 (human)3e-08streptococcus seropositivity63229347532293476Human
597372728GWAS1468802_Hhepatitis C induced liver cirrhosis QTL GWAS1468802 (human)9e-11hepatitis C induced liver cirrhosis63234795032347951Human
597580597GWAS1637457_Hlymphocyte count QTL GWAS1637457 (human)2e-28lymphocyte countblood lymphocyte count (CMO:0000031)63233365032333651Human
597452592GWAS1548666_HBMI-adjusted waist-hip ratio QTL GWAS1548666 (human)1e-10body size trait (VT:0100005)63236937332369389Human
597249833GWAS1345907_Hblautia seropositivity QTL GWAS1345907 (human)2e-13blautia seropositivity63229347532293476Human
597457709GWAS1553783_Hclostridiales seropositivity QTL GWAS1553783 (human)9e-09clostridiales seropositivity63233204532332046Human
597452589GWAS1548663_HBMI-adjusted waist-hip ratio QTL GWAS1548663 (human)6e-11body size trait (VT:0100005)63236742732367428Human
597451055GWAS1547129_Hstaphylococcus seropositivity QTL GWAS1547129 (human)2e-12staphylococcus seropositivity63229532232295323Human
597452591GWAS1548665_HBMI-adjusted waist-hip ratio QTL GWAS1548665 (human)2e-11body size trait (VT:0100005)63232765132327652Human
597457705GWAS1553779_Hbacilli seropositivity QTL GWAS1553779 (human)5e-14bacilli seropositivity63232818832328189Human
597249826GWAS1345900_Hplant allergen seropositivity QTL GWAS1345900 (human)3e-08plant allergen seropositivity63234368232343683Human
597167396GWAS1263470_HSjogren syndrome QTL GWAS1263470 (human)6e-10Sjogren syndrome63230437932304380Human
597217624GWAS1313698_Hage at diagnosis, type 1 diabetes mellitus QTL GWAS1313698 (human)0.000006age at diagnosis, type 1 diabetes mellitus63233788132337882Human
407017088GWAS666064_Hasthma QTL GWAS666064 (human)3e-15asthma63237091832370919Human
597220699GWAS1316773_HBMI-adjusted waist-hip ratio QTL GWAS1316773 (human)2e-08body size trait (VT:0100005)63237187032371871Human
596966737GWAS1086256_HEpstein-Barr virus seropositivity QTL GWAS1086256 (human)7e-13Epstein-Barr virus seropositivity63235349532353496Human
597155666GWAS1251740_Hpsoriasis QTL GWAS1251740 (human)2e-20psoriasis63236164632361647Human
407167629GWAS816605_Hreticulocyte count QTL GWAS816605 (human)3e-21reticulocyte count63231363532313636Human
597453648GWAS1549722_Hstaphylococcus seropositivity QTL GWAS1549722 (human)7e-10staphylococcus seropositivity63233070732330708Human
407155850GWAS804826_HEpstein-Barr virus seropositivity QTL GWAS804826 (human)7e-13Epstein-Barr virus seropositivity63235349532353496Human
597429583GWAS1525657_Hprotein measurement QTL GWAS1525657 (human)5e-80protein measurement63230959432309595Human
597250892GWAS1346966_Hdorea seropositivity QTL GWAS1346966 (human)2e-08dorea seropositivity63229347532293476Human
597453642GWAS1549716_Hstaphylococcus seropositivity QTL GWAS1549716 (human)4e-08staphylococcus seropositivity63233489532334896Human
597249857GWAS1345931_Hstreptococcus seropositivity QTL GWAS1345931 (human)1e-25streptococcus seropositivity63236605032366051Human
406966427GWAS615403_Hmultiple sclerosis QTL GWAS615403 (human)9e-11multiple sclerosis63236841032368411Human
597616453GWAS1673313_Hileostomy QTL GWAS1673313 (human)3e-28ileostomy63233365032333651Human
597453632GWAS1549706_Hanimal allergen seropositivity QTL GWAS1549706 (human)2e-11animal allergen seropositivity63234243432342435Human
597250939GWAS1347013_Hstreptococcus seropositivity QTL GWAS1347013 (human)2e-25streptococcus seropositivity63236605032366051Human
597451642GWAS1547716_Hbilirubin measurement QTL GWAS1547716 (human)1e-09bilirubin measurementserum total bilirubin level (CMO:0000376)63231747132317472Human
597421427GWAS1517501_HBMI-adjusted waist-hip ratio QTL GWAS1517501 (human)3e-12body size trait (VT:0100005)63232765132327652Human
597074302GWAS1170376_Hsarcoidosis QTL GWAS1170376 (human)1e-33sarcoidosis63233460532334606Human
597421426GWAS1517500_HBMI-adjusted waist-hip ratio QTL GWAS1517500 (human)7e-12body size trait (VT:0100005)63236742732367428Human
597530998GWAS1627072_Hlymphocyte count QTL GWAS1627072 (human)1e-09lymphocyte countblood lymphocyte count (CMO:0000031)63236852232368523Human
597503859GWAS1599933_Hage-related hearing impairment QTL GWAS1599933 (human)2e-08age-related hearing impairment63232198232321983Human
597421429GWAS1517503_HBMI-adjusted waist-hip ratio QTL GWAS1517503 (human)1e-12body size trait (VT:0100005)63236937332369389Human
597421428GWAS1517502_HBMI-adjusted waist-hip ratio QTL GWAS1517502 (human)2e-08body size trait (VT:0100005)63234588232345883Human
407156395GWAS805371_HBMI-adjusted waist circumference QTL GWAS805371 (human)8e-14BMI-adjusted waist circumference63237120932371210Human
597453675GWAS1549749_Hstaphylococcus seropositivity QTL GWAS1549749 (human)4e-09staphylococcus seropositivity63231971932319720Human
407399090GWAS1048066_Hcomplement C4 measurement QTL GWAS1048066 (human)4e-19complement C4 measurement63233181532331816Human
597250916GWAS1346990_Hstaphylococcus seropositivity QTL GWAS1346990 (human)8e-17staphylococcus seropositivity63229347532293476Human
596966761GWAS1086280_HMHC class I polypeptide-related sequence A measurement QTL GWAS1086280 (human)9e-12MHC class I polypeptide-related sequence A measurement63237129932371300Human
597176472GWAS1272546_Hinterleukin-23 measurement QTL GWAS1272546 (human)6e-14blood interleukin-23 amount (VT:0008619)63231281432312815Human
406990150GWAS639126_Henergy intake QTL GWAS639126 (human)0.000002energy intake63235186032351861Human
597426330GWAS1522404_Hatopic eczema QTL GWAS1522404 (human)6e-17atopic eczema63231101532311016Human
597450395GWAS1546469_Hstaphylococcus seropositivity QTL GWAS1546469 (human)4e-10staphylococcus seropositivity63231507732315078Human
597453972GWAS1550046_Hstaphylococcus seropositivity QTL GWAS1550046 (human)3e-12staphylococcus seropositivity63231323932313240Human
597426324GWAS1522398_Hatopic eczema QTL GWAS1522398 (human)4e-13atopic eczema63237129932371300Human
597250192GWAS1346266_HEpstein-Barr virus seropositivity QTL GWAS1346266 (human)5e-13Epstein-Barr virus seropositivityserum anti-Epstein-Barr virus (EBV) antibody level (CMO:0003143)63231085832310859Human
597249680GWAS1345754_Hseropositivity measurement QTL GWAS1345754 (human)2e-08seropositivity measurement63234670632346707Human
597453975GWAS1550049_Hstaphylococcus seropositivity QTL GWAS1550049 (human)1e-09staphylococcus seropositivity63232031232320313Human
597438615GWAS1534689_Hatopic eczema QTL GWAS1534689 (human)4e-17atopic eczema63237017032370171Human
597450386GWAS1546460_Hanimal allergen seropositivity QTL GWAS1546460 (human)3e-13animal allergen seropositivity63229532232295323Human
597069959GWAS1166033_Hmosquito bite reaction itch intensity measurement, mosquito bite reaction size measurement QTL GWAS1166033 (human)9e-08mosquito bite reaction itch intensity measurement, mosquito bite reaction size measurement63230849832308499Human
597312142GWAS1408216_Hvaginal microbiome measurement QTL GWAS1408216 (human)0.000002vaginal microbiome measurement63229323732293238Human
597475464GWAS1571538_Hmucocutaneous lymph node syndrome QTL GWAS1571538 (human)7e-13mucocutaneous lymph node syndrome63233303232333033Human
597428871GWAS1524945_Hprotein measurement QTL GWAS1524945 (human)3e-20protein measurement63233831232338313Human
406956378GWAS605354_Hatopic eczema QTL GWAS605354 (human)4e-13atopic eczema63237129932371300Human
597042314GWAS1138388_Hhemoglobin measurement QTL GWAS1138388 (human)1e-35hemoglobin measurementhemoglobin measurement (CMO:0000508)63229347532293476Human
596968584GWAS1088103_Hrheumatoid arthritis, irritable bowel syndrome QTL GWAS1088103 (human)2e-38rheumatoid arthritis, irritable bowel syndrome63234430532344306Human
597451394GWAS1547468_Hvirus seropositivity QTL GWAS1547468 (human)2e-11virus seropositivity63233607132336072Human
597249721GWAS1345795_Hstaphylococcus seropositivity QTL GWAS1345795 (human)6e-16staphylococcus seropositivity63229347532293476Human
596962992GWAS1082511_Hreticulocyte count QTL GWAS1082511 (human)3e-21reticulocyte count63231363532313636Human
597616310GWAS1673170_Hinflammatory bowel disease QTL GWAS1673170 (human)5e-67inflammatory bowel disease63233365032333651Human
597092028GWAS1188102_Hresponse to flupirtine, drug-induced liver injury QTL GWAS1188102 (human)0.000007response to flupirtine, drug-induced liver injury63236137332361374Human
597143228GWAS1239302_Hhigh density lipoprotein cholesterol measurement QTL GWAS1239302 (human)0.0000002high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)63236368832363689Human
596965049GWAS1084568_HBMI-adjusted waist-hip ratio QTL GWAS1084568 (human)5e-16BMI-adjusted waist-hip ratio63237120932371210Human
596965562GWAS1085081_HHodgkins lymphoma, mixed cellularity QTL GWAS1085081 (human)3e-14Hodgkins lymphoma, mixed cellularity63235759432357595Human
407366518GWAS1015494_Hblood protein measurement QTL GWAS1015494 (human)8e-20blood protein measurement63233181532331816Human
597251246GWAS1347320_Hstaphylococcus seropositivity QTL GWAS1347320 (human)1e-15staphylococcus seropositivity63236311732363118Human
597061804GWAS1157878_Hsusceptibility to childhood ear infection measurement QTL GWAS1157878 (human)1e-10response to infection trait (VT:0010434)63229853332298534Human
597617317GWAS1674177_Hulcerative colitis QTL GWAS1674177 (human)7e-53ulcerative colitis63233365032333651Human
407254905GWAS903881_Hgenomic measurement QTL GWAS903881 (human)2e-09genomic measurement63233365032333651Human
597577950GWAS1634810_Hmembranous glomerulonephritis QTL GWAS1634810 (human)2e-40membranous glomerulonephritis63236898932368990Human
597462239GWAS1558313_Hadenoviridae virus seropositivity QTL GWAS1558313 (human)1e-09adenoviridae virus seropositivity63234710032347101Human
406943490GWAS592466_Hpartial thromboplastin time QTL GWAS592466 (human)0.0000007partial thromboplastin time63237129932371300Human
596969169GWAS1088688_Hsystemic lupus erythematosus QTL GWAS1088688 (human)2e-08systemic lupus erythematosus63235349532353496Human
597477594GWAS1573668_Hsystemic lupus erythematosus QTL GWAS1573668 (human)5e-09systemic lupus erythematosus63233168132331682Human
597363932GWAS1460006_Hlymphocyte count QTL GWAS1460006 (human)2e-52lymphocyte countblood lymphocyte count (CMO:0000031)63231890832318909Human
407235853GWAS884829_Hcomplement C4 measurement QTL GWAS884829 (human)1e-39complement C4 measurement63234815232348153Human
597254344GWAS1350418_Hsystemic lupus erythematosus QTL GWAS1350418 (human)7e-14systemic lupus erythematosus63235914432359145Human
597244621GWAS1340695_HBMI-adjusted waist circumference QTL GWAS1340695 (human)8e-14body size trait (VT:0100005)63237120932371210Human
597244620GWAS1340694_HBMI-adjusted waist circumference QTL GWAS1340694 (human)5e-10body size trait (VT:0100005)63232810132328102Human
597244622GWAS1340696_HBMI-adjusted waist circumference QTL GWAS1340696 (human)4e-17body size trait (VT:0100005)63233831332338314Human
597398723GWAS1494797_Hsystemic lupus erythematosus QTL GWAS1494797 (human)2e-08systemic lupus erythematosus63235349532353496Human
597397242GWAS1493316_Hvaginal microbiome measurement QTL GWAS1493316 (human)0.000002vaginal microbiome measurement63230036632300367Human
597250299GWAS1346373_Hstreptococcus seropositivity QTL GWAS1346373 (human)8e-09streptococcus seropositivity63229347532293476Human
597397241GWAS1493315_Hvaginal microbiome measurement QTL GWAS1493315 (human)0.000002vaginal microbiome measurement63229387632293877Human
406986534GWAS635510_Hvisceral adipose tissue measurement QTL GWAS635510 (human)0.000003visceral adipose tissue measurement63235759432357595Human
597250303GWAS1346377_Hstreptococcus seropositivity QTL GWAS1346377 (human)4e-11streptococcus seropositivity63229347532293476Human
1643377BW325_HBody weight QTL 325 (human)2.320.0005Body fat amount6691196032911960Human
597053182GWAS1149256_Hasthma QTL GWAS1149256 (human)8e-09asthma63231955232319553Human
407144236GWAS793212_HHodgkins lymphoma, mixed cellularity QTL GWAS793212 (human)3e-14Hodgkins lymphoma, mixed cellularity63235759432357595Human
597251827GWAS1347901_Hstaphylococcus seropositivity QTL GWAS1347901 (human)7e-09staphylococcus seropositivity63232315032323151Human
597452022GWAS1548096_Hstaphylococcus seropositivity QTL GWAS1548096 (human)1e-11staphylococcus seropositivity63233607132336072Human
597251318GWAS1347392_Hanimal allergen seropositivity QTL GWAS1347392 (human)8e-14animal allergen seropositivity63235627832356279Human
597247721GWAS1343795_Hplatelet-to-lymphocyte ratio QTL GWAS1343795 (human)4e-12platelet quantity (VT:0003179)63235887632358877Human
597221610GWAS1317684_Hchronic obstructive pulmonary disease QTL GWAS1317684 (human)3e-13lung integrity trait (VT:0010906)63229347532293476Human
597457134GWAS1553208_Hanimal allergen seropositivity QTL GWAS1553208 (human)1e-12animal allergen seropositivity63232818832328189Human
597181165GWAS1277239_Hhemoglobin measurement QTL GWAS1277239 (human)2e-13hemoglobin measurementhemoglobin measurement (CMO:0000508)63231633132316332Human
597452009GWAS1548083_Hstaphylococcus seropositivity QTL GWAS1548083 (human)1e-09staphylococcus seropositivity63233607132336072Human
406989762GWAS638738_HMHC class I polypeptide-related sequence A measurement QTL GWAS638738 (human)9e-12MHC class I polypeptide-related sequence A measurement63237129932371300Human
597465629GWAS1561703_HHodgkins lymphoma, mixed cellularity QTL GWAS1561703 (human)3e-14Hodgkins lymphoma, mixed cellularity63235759432357595Human
597453336GWAS1549410_Hbacteria seropositivity QTL GWAS1549410 (human)4e-08bacteria seropositivity63232031232320313Human
597118994GWAS1215068_Hbipolar disorder, inflammatory bowel disease QTL GWAS1215068 (human)2e-15bipolar disorder, inflammatory bowel disease63237177132371772Human
597273631GWAS1369705_Hcomplement C4 measurement QTL GWAS1369705 (human)4e-19complement C4 measurement63233181532331816Human
597308956GWAS1405030_Hvaginal microbiome measurement QTL GWAS1405030 (human)0.000002vaginal microbiome measurement63236600732366008Human
597511706GWAS1607780_Hnon-receptor tyrosine-protein kinase TYK2 measurement QTL GWAS1607780 (human)3e-27non-receptor tyrosine-protein kinase TYK2 measurement63236716932367170Human
597521429GWAS1617503_Hrheumatoid arthritis, hypothyroidism QTL GWAS1617503 (human)2e-56rheumatoid arthritis, hypothyroidism63232943232329433Human
597261333GWAS1357407_HInguinal hernia QTL GWAS1357407 (human)4e-08Inguinal hernia63229588632295887Human
597251092GWAS1347166_Hstaphylococcus seropositivity QTL GWAS1347166 (human)3e-20streptococcus seropositivity63229347532293476Human
597261332GWAS1357406_HInguinal hernia QTL GWAS1357406 (human)4e-08Inguinal hernia63229347532293476Human
597017112GWAS1113186_Hrheumatoid arthritis, irritable bowel syndrome QTL GWAS1113186 (human)2e-38rheumatoid arthritis, irritable bowel syndrome63234430532344306Human
596966913GWAS1086432_Hcomplement C4 measurement QTL GWAS1086432 (human)4e-19complement C4 measurement63233181532331816Human
597616651GWAS1673511_Henteritis QTL GWAS1673511 (human)3e-37enteritis63233365032333651Human
597249551GWAS1345625_Hstaphylococcus seropositivity QTL GWAS1345625 (human)5e-14staphylococcus seropositivity63229347532293476Human
597462538GWAS1558612_Hfaecalibacterium seropositivity QTL GWAS1558612 (human)6e-10faecalibacterium seropositivity63233820232338203Human
597249537GWAS1345611_Hstreptococcus seropositivity QTL GWAS1345611 (human)4e-21streptococcus seropositivity63229347532293476Human
597245441GWAS1341515_HBMI-adjusted waist-hip ratio QTL GWAS1341515 (human)9e-14body size trait (VT:0100005)63231184532311846Human
597245443GWAS1341517_HBMI-adjusted waist-hip ratio QTL GWAS1341517 (human)3e-16body size trait (VT:0100005)63237120932371210Human
597245442GWAS1341516_HBMI-adjusted waist-hip ratio QTL GWAS1341516 (human)7e-11body size trait (VT:0100005)63232810132328102Human
597487104GWAS1583178_Hcoronary artery disease, factor VII measurement QTL GWAS1583178 (human)2e-14coronary artery disease, factor VII measurement63230985032309851Human
597251077GWAS1347151_Hclostridiales seropositivity QTL GWAS1347151 (human)6e-31clostridiales seropositivity63232764232327643Human
1643399BMD5_HBone mineral density QTL 5 (human)2.320.0005Bone mineral density6691196032911960Human
597453315GWAS1549389_Hanimal allergen seropositivity QTL GWAS1549389 (human)5e-17animal allergen seropositivity63234243432342435Human
597590078GWAS1646938_Henteritis QTL GWAS1646938 (human)6e-27enteritis63233365032333651Human
597251121GWAS1347195_Hstreptococcus seropositivity QTL GWAS1347195 (human)4e-10streptococcus seropositivity63229347532293476Human
597462580GWAS1558654_HBMI-adjusted waist-hip ratio QTL GWAS1558654 (human)2e-09body size trait (VT:0100005)63236937332369389Human
407178220GWAS827196_HBMI-adjusted waist-hip ratio QTL GWAS827196 (human)5e-16BMI-adjusted waist-hip ratio63237120932371210Human
597433398GWAS1529472_Hprotein measurement QTL GWAS1529472 (human)7e-26protein measurement63236477332364774Human
597244457GWAS1340531_HBMI-adjusted waist circumference QTL GWAS1340531 (human)5e-11body size trait (VT:0100005)63230598832305989Human
597017121GWAS1113195_Hrheumatoid arthritis, irritable bowel syndrome QTL GWAS1113195 (human)4e-15rheumatoid arthritis, irritable bowel syndrome63237129932371300Human
597273632GWAS1369706_Hcomplement C4 measurement QTL GWAS1369706 (human)5e-16complement C4 measurement63234487332344874Human
597424162GWAS1520236_HBMI-adjusted waist circumference QTL GWAS1520236 (human)4e-10body size trait (VT:0100005)63236937332369389Human
597086252GWAS1182326_Hautoimmune disease QTL GWAS1182326 (human)2e-08autoimmune disease63229810432298105Human
596962862GWAS1082381_Hvisceral adipose tissue measurement QTL GWAS1082381 (human)0.000003visceral adipose tissue measurement63235759432357595Human
597308961GWAS1405035_Hvaginal microbiome measurement QTL GWAS1405035 (human)0.000002vaginal microbiome measurement63229686832296869Human
597371424GWAS1467498_Hatopic eczema QTL GWAS1467498 (human)5e-19atopic eczema63234113132341132Human
596962863GWAS1082382_Henergy intake QTL GWAS1082382 (human)0.000002energy intake63235186032351861Human
597521952GWAS1618026_Hrheumatoid arthritis, hypothyroidism QTL GWAS1618026 (human)7e-44rheumatoid arthritis, hypothyroidism63235702232357023Human
597261401GWAS1357475_HInguinal hernia QTL GWAS1357475 (human)3e-08Inguinal hernia63236605032366051Human
597261400GWAS1357474_HInguinal hernia QTL GWAS1357474 (human)3e-08Inguinal hernia63234308632343087Human
597451353GWAS1547427_Hstaphylococcus seropositivity QTL GWAS1547427 (human)2e-15staphylococcus seropositivity63232818832328189Human
597261395GWAS1357469_HInguinal hernia QTL GWAS1357469 (human)4e-08Inguinal hernia63230784432307845Human
597261397GWAS1357471_HInguinal hernia QTL GWAS1357471 (human)4e-08Inguinal hernia63231758532317586Human
597261396GWAS1357470_HInguinal hernia QTL GWAS1357470 (human)4e-08Inguinal hernia63230959432309595Human
597251668GWAS1347742_HEpstein-Barr virus seropositivity QTL GWAS1347742 (human)9e-11Epstein-Barr virus seropositivityserum anti-Epstein-Barr virus (EBV) antibody level (CMO:0003143)63231085832310859Human
597261399GWAS1357473_HInguinal hernia QTL GWAS1357473 (human)3e-08Inguinal hernia63233776732337768Human
597261398GWAS1357472_HInguinal hernia QTL GWAS1357472 (human)3e-08Inguinal hernia63233460532334606Human
596962882GWAS1082401_Hpartial thromboplastin time QTL GWAS1082401 (human)0.0000007partial thromboplastin time63237129932371300Human
597435970GWAS1532044_Hsarcoidosis QTL GWAS1532044 (human)0.000006sarcoidosis63232818832328189Human
597513340GWAS1609414_Hcomplement C4 measurement QTL GWAS1609414 (human)1e-39complement C4 measurement63234815232348153Human
1358839MULTSCL5_HMultiple sclerosis susceptibility QTL 5 (human)Multiple sclerosis susceptibility61958431145584311Human
597257850GWAS1353924_Hceliac disease QTL GWAS1353924 (human)8e-10celiac disease63236876832368769Human
597507198GWAS1603272_HMHC class I polypeptide-related sequence A measurement QTL GWAS1603272 (human)9e-12MHC class I polypeptide-related sequence A measurement63237129932371300Human
597451385GWAS1547459_HEpstein-Barr virus seropositivity QTL GWAS1547459 (human)7e-13Epstein-Barr virus seropositivityserum anti-Epstein-Barr virus (EBV) antibody level (CMO:0003143)63235349532353496Human
597581941GWAS1638801_Hpulse pressure measurement QTL GWAS1638801 (human)2e-13pulse pressure measurementpulse pressure (CMO:0000292)63236898932368990Human
1298431RA11_HRheumatoid arthritis QTL 11 (human)0.0000024Joint/bone inflammationrheumatoid arthritis61991188340191709Human
597454960GWAS1551034_Hseropositivity measurement QTL GWAS1551034 (human)4e-09seropositivity measurement63229532232295323Human
597250166GWAS1346240_Hescherichia phage virus seropositivity QTL GWAS1346240 (human)1e-08escherichia phage virus seropositivity63236605032366051Human
407013805GWAS662781_Hmultiple sclerosis QTL GWAS662781 (human)7e-16multiple sclerosis63236841032368411Human
597433964GWAS1530038_Hprotein measurement QTL GWAS1530038 (human)8e-21protein measurement63236477332364774Human
597304424GWAS1400498_HBMI-adjusted waist-hip ratio QTL GWAS1400498 (human)1e-16body size trait (VT:0100005)63233831332338314Human
597304430GWAS1400504_HBMI-adjusted waist-hip ratio QTL GWAS1400504 (human)3e-08body size trait (VT:0100005)63231085832310859Human
597250147GWAS1346221_Hstreptococcus seropositivity QTL GWAS1346221 (human)3e-14streptococcus seropositivity63230117632301177Human
597304422GWAS1400496_HBMI-adjusted waist-hip ratio QTL GWAS1400496 (human)3e-10body size trait (VT:0100005)63232810132328102Human
597304423GWAS1400497_HBMI-adjusted waist-hip ratio QTL GWAS1400497 (human)5e-16body size trait (VT:0100005)63237120932371210Human
597097576GWAS1193650_Htestosterone measurement QTL GWAS1193650 (human)1e-08testosterone measurementserum testosterone level (CMO:0000568)63234747632347477Human
597304421GWAS1400495_HBMI-adjusted waist-hip ratio QTL GWAS1400495 (human)7e-13body size trait (VT:0100005)63231184532311846Human
597616737GWAS1673597_Hulcerative colitis QTL GWAS1673597 (human)5e-20ulcerative colitis63233365032333651Human

Markers in Region
RH80842  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,260,513 - 32,260,704UniSTSGRCh37
Build 36632,368,491 - 32,368,682RGDNCBI36
Celera633,827,641 - 33,827,832RGD
Cytogenetic Map6p21.3UniSTS
HuRef632,014,862 - 32,015,053UniSTS
GeneMap99-GB4 RH Map6146.4UniSTS
RH102067  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,317,467 - 32,317,591UniSTSGRCh37
Build 36632,425,445 - 32,425,569RGDNCBI36
Cytogenetic Map6p21.3UniSTS
GeneMap99-GB4 RH Map6120.03UniSTS
SHGC-79455  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,281,746 - 32,282,016UniSTSGRCh37
Build 36632,389,724 - 32,389,994RGDNCBI36
Celera633,848,878 - 33,849,148RGD
Cytogenetic Map6p21.3UniSTS
HuRef632,036,094 - 32,036,364UniSTS
TNG Radiation Hybrid Map668776.0UniSTS
D6S2892  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,269,688 - 32,269,904UniSTSGRCh37
Build 36632,377,666 - 32,377,882RGDNCBI36
Celera633,836,817 - 33,837,039RGD
HuRef632,024,038 - 32,024,254UniSTS
D6S2734  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,278,450 - 32,278,613UniSTSGRCh37
Build 36632,386,428 - 32,386,591RGDNCBI36
Celera633,845,582 - 33,845,745RGD
HuRef632,032,798 - 32,032,961UniSTS
D6S2732  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,290,567 - 32,290,796UniSTSGRCh37
Build 36632,398,545 - 32,398,774RGDNCBI36
Celera633,857,677 - 33,857,906RGD
HuRef632,044,893 - 32,045,128UniSTS
D6S2891  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,298,339 - 32,298,516UniSTSGRCh37
Build 36632,406,317 - 32,406,494RGDNCBI36
Celera633,865,454 - 33,865,629RGD
HuRef632,052,676 - 32,052,857UniSTS
D6S2913  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,326,580 - 32,326,810UniSTSGRCh37
Build 36632,434,558 - 32,434,788RGDNCBI36
Celera633,893,367 - 33,893,591RGD
HuRef632,080,563 - 32,080,787UniSTS
D6S2890  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,328,080 - 32,328,232UniSTSGRCh37
Build 36632,436,058 - 32,436,210RGDNCBI36
Celera633,894,861 - 33,895,011RGD
HuRef632,082,057 - 32,082,207UniSTS
D6S2744  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,328,512 - 32,328,712UniSTSGRCh37
Build 36632,436,490 - 32,436,690RGDNCBI36
Celera633,895,291 - 33,895,492RGD
HuRef632,082,487 - 32,082,688UniSTS
D6S2889  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,334,760 - 32,334,904UniSTSGRCh37
Build 36632,442,738 - 32,442,882RGDNCBI36
Celera633,901,553 - 33,901,697RGD
HuRef632,088,746 - 32,088,890UniSTS
13-36829  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,334,763 - 32,334,940UniSTSGRCh37
Build 36632,442,741 - 32,442,918RGDNCBI36
Celera633,901,556 - 33,901,733RGD
HuRef632,088,749 - 32,088,926UniSTS
D6S2888  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,334,914 - 32,335,138UniSTSGRCh37
GRCh37632,334,970 - 32,335,080UniSTSGRCh37
Build 36632,442,892 - 32,443,116RGDNCBI36
Celera633,901,763 - 33,901,875UniSTS
Celera633,901,707 - 33,901,933RGD
HuRef632,088,900 - 32,089,126UniSTS
HuRef632,088,956 - 32,089,068UniSTS
D6S2887  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,338,085 - 32,338,373UniSTSGRCh37
Build 36632,446,063 - 32,446,351RGDNCBI36
Celera633,904,873 - 33,905,145RGD
HuRef632,092,079 - 32,092,355UniSTS
D6S2886  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,338,591 - 32,338,841UniSTSGRCh37
GRCh37632,338,400 - 32,338,784UniSTSGRCh37
Build 36632,446,378 - 32,446,762RGDNCBI36
Celera633,905,172 - 33,905,559RGD
Celera633,905,363 - 33,905,616UniSTS
HuRef632,092,573 - 32,092,826UniSTS
HuRef632,092,382 - 32,092,769UniSTS
M2_2_46  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,338,400 - 32,338,784UniSTSGRCh37
Build 36632,446,378 - 32,446,762RGDNCBI36
Celera633,905,172 - 33,905,559RGD
Cytogenetic Map6p21.3UniSTS
HuRef632,092,382 - 32,092,769UniSTS
M2_2_48  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,334,914 - 32,335,138UniSTSGRCh37
Build 36632,442,892 - 32,443,116RGDNCBI36
Celera633,901,707 - 33,901,933RGD
Cytogenetic Map6p21.3UniSTS
HuRef632,088,900 - 32,089,126UniSTS
D6S2914  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37632,271,715 - 32,272,122UniSTSGRCh37
Build 36632,379,693 - 32,380,100RGDNCBI36
Celera633,838,850 - 33,839,257RGD
HuRef632,026,065 - 32,026,472UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
639 1144 1423 950 2777 790 1022 1 170 968 92 1297 3102 3115 4 2162 407 1243 772 81

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001286474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001286475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_006781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017010182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017010183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024446306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024446307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054329723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054330219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054330220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054330509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054330510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054330991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054330992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054331274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054354045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054354046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK225742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK302176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK310230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL034394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL035445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL662796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL670296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL671511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL845509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL845557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX001039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX113229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX119999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX255945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX284927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX908732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX927180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR751604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR752644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR759737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR759773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR759917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC399589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KY500196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U60665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000375007   ⟹   ENSP00000364146
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl632,292,715 - 32,371,879 (-)Ensembl
Ensembl Acc Id: ENST00000375015   ⟹   ENSP00000364155
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl632,292,698 - 32,371,907 (-)Ensembl
Ensembl Acc Id: ENST00000442822   ⟹   ENSP00000411164
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl632,288,526 - 32,371,899 (-)Ensembl
Ensembl Acc Id: ENST00000447241   ⟹   ENSP00000415517
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl632,292,698 - 32,371,879 (-)Ensembl
Ensembl Acc Id: ENST00000527965   ⟹   ENSP00000435103
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl632,292,715 - 32,371,872 (-)Ensembl
Ensembl Acc Id: ENST00000532023   ⟹   ENSP00000432814
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl632,335,930 - 32,371,872 (-)Ensembl
Ensembl Acc Id: ENST00000533191   ⟹   ENSP00000431199
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl632,292,698 - 32,371,903 (-)Ensembl
Ensembl Acc Id: ENST00000534588   ⟹   ENSP00000432566
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl632,336,630 - 32,371,879 (-)Ensembl
Ensembl Acc Id: ENST00000612031   ⟹   ENSP00000480403
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl632,292,700 - 32,371,912 (-)Ensembl
Ensembl Acc Id: ENST00000617061   ⟹   ENSP00000482001
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl632,292,956 - 32,371,912 (-)Ensembl
Ensembl Acc Id: ENST00000698834   ⟹   ENSP00000513970
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl632,293,697 - 32,367,954 (-)Ensembl
RefSeq Acc Id: NM_001286474   ⟹   NP_001273403
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38632,292,698 - 32,371,903 (-)NCBI
HuRef632,014,824 - 32,093,673 (-)NCBI
CHM1_1632,262,950 - 32,342,176 (-)NCBI
T2T-CHM13v2.0632,145,999 - 32,224,841 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001286475   ⟹   NP_001273404
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38632,292,698 - 32,371,903 (-)NCBI
HuRef632,014,824 - 32,093,673 (-)NCBI
CHM1_1632,262,950 - 32,342,176 (-)NCBI
T2T-CHM13v2.0632,145,999 - 32,224,841 (-)NCBI
Sequence:
RefSeq Acc Id: NM_006781   ⟹   NP_006772
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38632,292,698 - 32,371,903 (-)NCBI
GRCh37632,260,475 - 32,339,705 (-)NCBI
Build 36632,368,453 - 32,447,634 (-)NCBI Archive
Celera633,827,603 - 33,906,430 (-)RGD
HuRef632,014,824 - 32,093,673 (-)NCBI
CHM1_1632,262,950 - 32,342,176 (-)NCBI
T2T-CHM13v2.0632,145,999 - 32,224,841 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017010182   ⟹   XP_016865671
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38632,292,698 - 32,338,991 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024446307   ⟹   XP_024302075
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38632,292,698 - 32,371,802 (-)NCBI
Sequence:
RefSeq Acc Id: XM_054354045   ⟹   XP_054210020
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0632,146,024 - 32,192,275 (-)NCBI
RefSeq Acc Id: XM_054354046   ⟹   XP_054210021
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0632,146,024 - 32,224,740 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001273403 (Get FASTA)   NCBI Sequence Viewer  
  NP_001273404 (Get FASTA)   NCBI Sequence Viewer  
  NP_006772 (Get FASTA)   NCBI Sequence Viewer  
  XP_016865671 (Get FASTA)   NCBI Sequence Viewer  
  XP_024302075 (Get FASTA)   NCBI Sequence Viewer  
  XP_054185698 (Get FASTA)   NCBI Sequence Viewer  
  XP_054186194 (Get FASTA)   NCBI Sequence Viewer  
  XP_054186195 (Get FASTA)   NCBI Sequence Viewer  
  XP_054186484 (Get FASTA)   NCBI Sequence Viewer  
  XP_054186485 (Get FASTA)   NCBI Sequence Viewer  
  XP_054186966 (Get FASTA)   NCBI Sequence Viewer  
  XP_054186967 (Get FASTA)   NCBI Sequence Viewer  
  XP_054187249 (Get FASTA)   NCBI Sequence Viewer  
  XP_054210020 (Get FASTA)   NCBI Sequence Viewer  
  XP_054210021 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB02975 (Get FASTA)   NCBI Sequence Viewer  
  AAH34774 (Get FASTA)   NCBI Sequence Viewer  
  AQY76700 (Get FASTA)   NCBI Sequence Viewer  
  BAG63542 (Get FASTA)   NCBI Sequence Viewer  
  CAI20345 (Get FASTA)   NCBI Sequence Viewer  
  CAI20346 (Get FASTA)   NCBI Sequence Viewer  
  CAI42178 (Get FASTA)   NCBI Sequence Viewer  
  CAI42179 (Get FASTA)   NCBI Sequence Viewer  
  EAX03624 (Get FASTA)   NCBI Sequence Viewer  
  EAX03625 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000364155.4
  ENSP00000372611.3
  ENSP00000382654.1
  ENSP00000408514.1
  ENSP00000410514.2
  ENSP00000415517
  ENSP00000415517.2
  ENSP00000431199
  ENSP00000431199.1
  ENSP00000435103
  ENSP00000448472.2
  ENSP00000485011.1
GenBank Protein Q5SRN2 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_006772   ⟸   NM_006781
- Peptide Label: isoform a
- UniProtKB: Q5TG26 (UniProtKB/Swiss-Prot),   Q5TG25 (UniProtKB/Swiss-Prot),   Q5SRN3 (UniProtKB/Swiss-Prot),   Q5SPL0 (UniProtKB/Swiss-Prot),   Q5SPK9 (UniProtKB/Swiss-Prot),   Q5SPJ0 (UniProtKB/Swiss-Prot),   Q5SPI9 (UniProtKB/Swiss-Prot),   E9PMB1 (UniProtKB/Swiss-Prot),   B0S7R3 (UniProtKB/Swiss-Prot),   B0S7R2 (UniProtKB/Swiss-Prot),   A6NME2 (UniProtKB/Swiss-Prot),   A2BET2 (UniProtKB/Swiss-Prot),   A2BET1 (UniProtKB/Swiss-Prot),   Q8N4B6 (UniProtKB/Swiss-Prot),   Q5SRN2 (UniProtKB/Swiss-Prot),   F8VVU2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273404   ⟸   NM_001286475
- Peptide Label: isoform c
- UniProtKB: B4DXY0 (UniProtKB/TrEMBL),   E9PLW3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273403   ⟸   NM_001286474
- Peptide Label: isoform b
- UniProtKB: A0A1U9X7D1 (UniProtKB/TrEMBL),   A0A1U9X7D7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016865671   ⟸   XM_017010182
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024302075   ⟸   XM_024446307
- Peptide Label: isoform X2
- UniProtKB: F8VVU2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000432814   ⟸   ENST00000532023
Ensembl Acc Id: ENSP00000364155   ⟸   ENST00000375015
Ensembl Acc Id: ENSP00000364146   ⟸   ENST00000375007
Ensembl Acc Id: ENSP00000431199   ⟸   ENST00000533191
Ensembl Acc Id: ENSP00000480403   ⟸   ENST00000612031
Ensembl Acc Id: ENSP00000432566   ⟸   ENST00000534588
Ensembl Acc Id: ENSP00000411164   ⟸   ENST00000442822
Ensembl Acc Id: ENSP00000482001   ⟸   ENST00000617061
Ensembl Acc Id: ENSP00000415517   ⟸   ENST00000447241
Ensembl Acc Id: ENSP00000435103   ⟸   ENST00000527965
Ensembl Acc Id: ENSP00000513970   ⟸   ENST00000698834
RefSeq Acc Id: XP_054210021   ⟸   XM_054354046
- Peptide Label: isoform X5
- UniProtKB: F8VVU2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054210020   ⟸   XM_054354045
- Peptide Label: isoform X4

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5SRN2-F1-model_v2 AlphaFold Q5SRN2 1-563 view protein structure

Promoters
RGD ID:6872786
Promoter ID:EPDNEW_H9558
Type:initiation region
Name:C6orf10_1
Description:chromosome 6 open reading frame 10
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38632,371,903 - 32,371,963EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:13922 AgrOrtholog
COSMIC TSBP1 COSMIC
Ensembl Genes ENSG00000204296 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSG00000206245 UniProtKB/Swiss-Prot
  ENSG00000206310 UniProtKB/Swiss-Prot
  ENSG00000232106 UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000375015.8 UniProtKB/Swiss-Prot
  ENST00000383130.7 UniProtKB/Swiss-Prot
  ENST00000399749.5 UniProtKB/Swiss-Prot
  ENST00000447241 ENTREZGENE
  ENST00000447241.6 UniProtKB/Swiss-Prot
  ENST00000448986.6 UniProtKB/Swiss-Prot
  ENST00000457429.5 UniProtKB/Swiss-Prot
  ENST00000527965 ENTREZGENE
  ENST00000533191 ENTREZGENE
  ENST00000533191.6 UniProtKB/Swiss-Prot
  ENST00000548927.4 UniProtKB/Swiss-Prot
  ENST00000618584.4 UniProtKB/Swiss-Prot
GTEx ENSG00000204296 GTEx
  ENSG00000206245 GTEx
  ENSG00000206310 GTEx
  ENSG00000232106 GTEx
HGNC ID HGNC:13922 ENTREZGENE
Human Proteome Map TSBP1 Human Proteome Map
InterPro TSBP1 UniProtKB/Swiss-Prot
KEGG Report hsa:10665 UniProtKB/Swiss-Prot
NCBI Gene 10665 ENTREZGENE
OMIM 618151 OMIM
PANTHER PTHR14368 UniProtKB/Swiss-Prot
  TESTIS-EXPRESSED BASIC PROTEIN 1 UniProtKB/Swiss-Prot
PharmGKB PA25923 PharmGKB
UniProt A0A087WYQ2_HUMAN UniProtKB/TrEMBL
  A0A0G2JHK2_HUMAN UniProtKB/TrEMBL
  A0A0G2JK66_HUMAN UniProtKB/TrEMBL
  A0A0G2JKA5 ENTREZGENE, UniProtKB/TrEMBL
  A0A0G2JM37_HUMAN UniProtKB/TrEMBL
  A0A0G2JM93 ENTREZGENE, UniProtKB/TrEMBL
  A0A0G2JMA0_HUMAN UniProtKB/TrEMBL
  A0A0G2JMH0_HUMAN UniProtKB/TrEMBL
  A0A0G2JML4_HUMAN UniProtKB/TrEMBL
  A0A0G2JN18_HUMAN UniProtKB/TrEMBL
  A0A0G2JN90_HUMAN UniProtKB/TrEMBL
  A0A0G2JNW1_HUMAN UniProtKB/TrEMBL
  A0A0G2JP41 ENTREZGENE, UniProtKB/TrEMBL
  A0A0G2JPA5_HUMAN UniProtKB/TrEMBL
  A0A0G2JQ19_HUMAN UniProtKB/TrEMBL
  A0A140T8X9_HUMAN UniProtKB/TrEMBL
  A0A140T960_HUMAN UniProtKB/TrEMBL
  A0A140T9M2 ENTREZGENE, UniProtKB/TrEMBL
  A0A140T9Y3_HUMAN UniProtKB/TrEMBL
  A0A1U9X7D1 ENTREZGENE, UniProtKB/TrEMBL
  A0A1U9X7D7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8V8TNR9_HUMAN UniProtKB/TrEMBL
  A2BET1 ENTREZGENE
  A2BET2 ENTREZGENE
  A6NME2 ENTREZGENE
  B0S7R2 ENTREZGENE
  B0S7R3 ENTREZGENE
  B4DXY0 ENTREZGENE, UniProtKB/TrEMBL
  C9J9T8_HUMAN UniProtKB/TrEMBL
  E9PLW3 ENTREZGENE, UniProtKB/TrEMBL
  E9PMB1 ENTREZGENE
  E9PNQ4_HUMAN UniProtKB/TrEMBL
  E9PQ85_HUMAN UniProtKB/TrEMBL
  F8VVU2 ENTREZGENE, UniProtKB/TrEMBL
  Q13647_HUMAN UniProtKB/TrEMBL
  Q5SPI9 ENTREZGENE
  Q5SPJ0 ENTREZGENE
  Q5SPK9 ENTREZGENE
  Q5SPL0 ENTREZGENE
  Q5SRN2 ENTREZGENE
  Q5SRN3 ENTREZGENE
  Q5TG25 ENTREZGENE
  Q5TG26 ENTREZGENE
  Q8N4B6 ENTREZGENE
  TSBP1_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary A2BET1 UniProtKB/Swiss-Prot
  A2BET2 UniProtKB/Swiss-Prot
  A6NME2 UniProtKB/Swiss-Prot
  B0S7R2 UniProtKB/Swiss-Prot
  B0S7R3 UniProtKB/Swiss-Prot
  E9PMB1 UniProtKB/Swiss-Prot
  Q5SPI9 UniProtKB/Swiss-Prot
  Q5SPJ0 UniProtKB/Swiss-Prot
  Q5SPK9 UniProtKB/Swiss-Prot
  Q5SPL0 UniProtKB/Swiss-Prot
  Q5SRN3 UniProtKB/Swiss-Prot
  Q5TG25 UniProtKB/Swiss-Prot
  Q5TG26 UniProtKB/Swiss-Prot
  Q8N4B6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-08-28 TSBP1  testis expressed basic protein 1  C6orf10  chromosome 6 open reading frame 10  Symbol and/or name change 5135510 APPROVED