PLAC8L1 (PLAC8 like 1) - Rat Genome Database

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Gene: PLAC8L1 (PLAC8 like 1) Homo sapiens
Analyze
Symbol: PLAC8L1
Name: PLAC8 like 1
RGD ID: 1342779
HGNC Page HGNC:31746
Description: ASSOCIATED WITH familial adenomatous polyposis 1; Hereditary Neoplastic Syndromes; Neurodevelopmental Disorders; INTERACTS WITH acrylamide; all-trans-retinoic acid; amiodarone
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: PLAC8-like 1; PLAC8-like protein 1
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385146,084,313 - 146,105,577 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5146,084,313 - 146,105,577 (-)EnsemblGRCh38hg38GRCh38
GRCh375145,463,876 - 145,485,140 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365145,444,069 - 145,464,139 (-)NCBINCBI36Build 36hg18NCBI36
Celera5141,543,818 - 141,563,885 (-)NCBICelera
Cytogenetic Map5q32NCBI
HuRef5140,610,627 - 140,630,691 (-)NCBIHuRef
CHM1_15144,896,741 - 144,916,816 (-)NCBICHM1_1
T2T-CHM13v2.05146,618,597 - 146,639,856 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11329013   PMID:12477932   PMID:20855956   PMID:21347707   PMID:33961781  


Genomics

Comparative Map Data
PLAC8L1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385146,084,313 - 146,105,577 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5146,084,313 - 146,105,577 (-)EnsemblGRCh38hg38GRCh38
GRCh375145,463,876 - 145,485,140 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365145,444,069 - 145,464,139 (-)NCBINCBI36Build 36hg18NCBI36
Celera5141,543,818 - 141,563,885 (-)NCBICelera
Cytogenetic Map5q32NCBI
HuRef5140,610,627 - 140,630,691 (-)NCBIHuRef
CHM1_15144,896,741 - 144,916,816 (-)NCBICHM1_1
T2T-CHM13v2.05146,618,597 - 146,639,856 (-)NCBIT2T-CHM13v2.0
Plac8l1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391842,311,740 - 42,329,774 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1842,311,748 - 42,329,774 (-)EnsemblGRCm39 Ensembl
GRCm381842,178,675 - 42,196,709 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1842,178,683 - 42,196,709 (-)EnsemblGRCm38mm10GRCm38
MGSCv371842,338,329 - 42,356,363 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361842,304,652 - 42,322,659 (-)NCBIMGSCv36mm8
Celera1843,540,057 - 43,558,067 (-)NCBICelera
Cytogenetic Map18B3NCBI
cM Map1822.35NCBI
Plac8l1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81834,419,873 - 34,452,414 (-)NCBIGRCr8
mRatBN7.21834,167,667 - 34,192,137 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1834,168,864 - 34,190,800 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01836,492,957 - 36,513,493 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1836,492,996 - 36,513,317 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01836,160,310 - 36,180,628 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41835,366,612 - 35,388,331 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1833,765,789 - 33,788,023 (-)NCBICelera
Cytogenetic Map18p11NCBI
Plac8l1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554157,993,960 - 8,022,322 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554157,990,558 - 8,024,998 (+)NCBIChiLan1.0ChiLan1.0
PLAC8L1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24141,337,513 - 141,365,072 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15139,477,063 - 139,506,183 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05141,533,540 - 141,555,106 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15147,548,249 - 147,569,436 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5147,548,249 - 147,568,269 (-)Ensemblpanpan1.1panPan2
PLAC8L1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1240,517,050 - 40,535,185 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl240,517,004 - 40,534,858 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha237,561,907 - 37,579,668 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0240,980,849 - 40,998,682 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl240,980,894 - 40,999,269 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1238,047,548 - 38,065,312 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0238,864,086 - 38,881,829 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0239,685,131 - 39,706,911 (-)NCBIUU_Cfam_GSD_1.0
Plac8l1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213147,004,223 - 147,022,557 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365048,578,255 - 8,596,521 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365048,578,255 - 8,596,551 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLAC8L1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2147,437,993 - 147,463,218 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12147,435,995 - 147,464,007 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22153,957,809 - 153,981,877 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PLAC8L1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12348,660,998 - 48,682,909 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2348,661,123 - 48,681,410 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603429,107,169 - 29,129,488 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Plac8l1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247745,584,827 - 5,602,334 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247745,584,922 - 5,602,440 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PLAC8L1
20 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 5q23.3-33.2(chr5:130860928-155321811)x3 copy number gain See cases [RCV000051193] Chr5:130860928..155321811 [GRCh38]
Chr5:130196621..154701371 [GRCh37]
Chr5:130224520..154681564 [NCBI36]
Chr5:5q23.3-33.2		 pathogenic
GRCh38/hg38 5q21.3-33.2(chr5:106619588-156124387)x1 copy number loss See cases [RCV000053524] Chr5:106619588..156124387 [GRCh38]
Chr5:105955289..155551397 [GRCh37]
Chr5:105983188..155483975 [NCBI36]
Chr5:5q21.3-33.2		 pathogenic
GRCh38/hg38 5q32(chr5:145197355-148541511)x1 copy number loss See cases [RCV000136679] Chr5:145197355..148541511 [GRCh38]
Chr5:144576918..147921074 [GRCh37]
Chr5:144557111..147901267 [NCBI36]
Chr5:5q32		 pathogenic
GRCh38/hg38 5q23.3-33.2(chr5:129847794-153353546)x3 copy number gain See cases [RCV000138808] Chr5:129847794..153353546 [GRCh38]
Chr5:129183487..152733106 [GRCh37]
Chr5:129211386..152713299 [NCBI36]
Chr5:5q23.3-33.2		 pathogenic
GRCh38/hg38 5q31.3-32(chr5:141089988-149530678)x3 copy number gain See cases [RCV000139504] Chr5:141089988..149530678 [GRCh38]
Chr5:140469572..148910241 [GRCh37]
Chr5:140449756..148890434 [NCBI36]
Chr5:5q31.3-32		 pathogenic
GRCh37/hg19 5q15-35.3(chr5:94844077-178830410)x3 copy number gain not provided [RCV000487658] Chr5:94844077..178830410 [GRCh37]
Chr5:5q15-35.3		 likely benign
NC_000005.9:g.(?_86400000)_(154000000_?)del deletion Familial adenomatous polyposis 1 [RCV004561496]|Hereditary cancer-predisposing syndrome [RCV000554476] Chr5:86400000..154000000 [GRCh37]
Chr5:5q14.3-33.2		 pathogenic
GRCh37/hg19 5q23.3-33.3(chr5:130125085-157574910)x3 copy number gain See cases [RCV000449349] Chr5:130125085..157574910 [GRCh37]
Chr5:5q23.3-33.3		 pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:113577-180719789) copy number gain See cases [RCV000510723] Chr5:113577..180719789 [GRCh37]
Chr5:5p15.33-q35.3		 pathogenic
GRCh37/hg19 5q21.3-35.3(chr5:106716357-180687338)x3 copy number gain See cases [RCV000448245] Chr5:106716357..180687338 [GRCh37]
Chr5:5q21.3-35.3		 pathogenic
GRCh37/hg19 5q31.3-32(chr5:141113273-149154835)x1 copy number loss See cases [RCV000510497] Chr5:141113273..149154835 [GRCh37]
Chr5:5q31.3-32		 pathogenic
GRCh37/hg19 5p15.1-q35.2(chr5:17628741-176575720)x1 copy number loss See cases [RCV000511978] Chr5:17628741..176575720 [GRCh37]
Chr5:5p15.1-q35.2		 pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:113577-180719789)x3 copy number gain See cases [RCV000512039] Chr5:113577..180719789 [GRCh37]
Chr5:5p15.33-q35.3		 pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:13648-180905029)x3 copy number gain not provided [RCV000744317] Chr5:13648..180905029 [GRCh37]
Chr5:5p15.33-q35.3		 pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:25328-180693344)x3 copy number gain not provided [RCV000744323] Chr5:25328..180693344 [GRCh37]
Chr5:5p15.33-q35.3		 pathogenic
Single allele deletion Neurodevelopmental disorder [RCV000787436] Chr5:14685137..149511942 [GRCh37]
Chr5:5p15.2-q32		 uncertain significance
Single allele deletion Neurodevelopmental disorder [RCV000787435] Chr5:144027815..146077337 [GRCh37]
Chr5:5q31.3-32		 uncertain significance
GRCh37/hg19 5q31.3-32(chr5:140424333-148985999)x3 copy number gain not provided [RCV000848228] Chr5:140424333..148985999 [GRCh37]
Chr5:5q31.3-32		 uncertain significance
GRCh37/hg19 5q32(chr5:145179409-145538047)x3 copy number gain not provided [RCV001259918] Chr5:145179409..145538047 [GRCh37]
Chr5:5q32		 uncertain significance
GRCh37/hg19 5q32(chr5:145313919-145540985)x3 copy number gain not provided [RCV001259919] Chr5:145313919..145540985 [GRCh37]
Chr5:5q32		 uncertain significance
GRCh37/hg19 5q23.3-33.3(chr5:130125085-157574910) copy number gain not specified [RCV002053526] Chr5:130125085..157574910 [GRCh37]
Chr5:5q23.3-33.3		 pathogenic
NM_001029869.3(PLAC8L1):c.100C>T (p.His34Tyr) single nucleotide variant not specified [RCV004163768] Chr5:146104212 [GRCh38]
Chr5:145483775 [GRCh37]
Chr5:5q32		 uncertain significance
NM_001029869.3(PLAC8L1):c.164G>T (p.Gly55Val) single nucleotide variant not specified [RCV004155877] Chr5:146098248 [GRCh38]
Chr5:145477811 [GRCh37]
Chr5:5q32		 uncertain significance
NM_001029869.3(PLAC8L1):c.200A>T (p.Gln67Leu) single nucleotide variant not specified [RCV004249359] Chr5:146098212 [GRCh38]
Chr5:145477775 [GRCh37]
Chr5:5q32		 uncertain significance
NM_001029869.3(PLAC8L1):c.350C>T (p.Thr117Ile) single nucleotide variant not specified [RCV004261434] Chr5:146085504 [GRCh38]
Chr5:145465067 [GRCh37]
Chr5:5q32		 uncertain significance
NM_001029869.3(PLAC8L1):c.179C>T (p.Thr60Met) single nucleotide variant not specified [RCV004511646] Chr5:146098233 [GRCh38]
Chr5:145477796 [GRCh37]
Chr5:5q32		 uncertain significance
NM_001029869.3(PLAC8L1):c.208G>A (p.Gly70Arg) single nucleotide variant not specified [RCV004511647] Chr5:146098204 [GRCh38]
Chr5:145477767 [GRCh37]
Chr5:5q32		 uncertain significance
NM_001029869.3(PLAC8L1):c.164G>C (p.Gly55Ala) single nucleotide variant not specified [RCV004511645] Chr5:146098248 [GRCh38]
Chr5:145477811 [GRCh37]
Chr5:5q32		 uncertain significance
GRCh37/hg19 5q31.3-32(chr5:141566629-147240595)x1 copy number loss not specified [RCV003986541] Chr5:141566629..147240595 [GRCh37]
Chr5:5q31.3-32		 pathogenic
NM_001029869.3(PLAC8L1):c.481T>C (p.Ser161Pro) single nucleotide variant not specified [RCV004662000] Chr5:146084485 [GRCh38]
Chr5:145464048 [GRCh37]
Chr5:5q32		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:365
Count of miRNA genes:298
Interacting mature miRNAs:312
Transcripts:ENST00000311450, ENST00000512998
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407227766GWAS876742_Hbone density QTL GWAS876742 (human)1e-300bone mineral mass (VT:0005007)bone mineral density (CMO:0001226)5146087312146087313Human
407387563GWAS1036539_Hacute myeloid leukemia QTL GWAS1036539 (human)9e-22acute myeloid leukemia5146104281146104282Human
1357314AASTH54_HAllergic/atopic asthma related QTL 54 (human)3.560.0003Reversible airflow obstructiontotal serum IgE5135892246150155845Human
407387718GWAS1036694_Hacute myeloid leukemia QTL GWAS1036694 (human)2e-11acute myeloid leukemia5146104281146104282Human


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1190 2412 2781 2216 4926 1714 2331 4 620 1673 462 2245 6956 6132 50 3707 837 1727 1600 170

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001029869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005268381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011537571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054351853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054351854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054351855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC091887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC130586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC130588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG198388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000311450   ⟹   ENSP00000309087
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5146,084,313 - 146,105,577 (-)Ensembl
Ensembl Acc Id: ENST00000512998   ⟹   ENSP00000423992
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5146,084,386 - 146,104,369 (-)Ensembl
RefSeq Acc Id: NM_001029869   ⟹   NP_001025040
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385146,084,313 - 146,105,577 (-)NCBI
GRCh375145,463,876 - 145,483,946 (-)RGD
Build 365145,444,069 - 145,464,139 (-)NCBI Archive
Celera5141,543,818 - 141,563,885 (-)RGD
HuRef5140,610,627 - 140,630,691 (-)ENTREZGENE
CHM1_15144,896,741 - 144,916,816 (-)NCBI
T2T-CHM13v2.05146,618,597 - 146,639,856 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005268381   ⟹   XP_005268438
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385146,084,313 - 146,103,772 (-)NCBI
GRCh375145,463,876 - 145,483,946 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011537571   ⟹   XP_011535873
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385146,084,313 - 146,103,772 (-)NCBI
Sequence:
RefSeq Acc Id: XM_054351853   ⟹   XP_054207828
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.05146,618,597 - 146,638,564 (-)NCBI
RefSeq Acc Id: XM_054351854   ⟹   XP_054207829
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.05146,618,597 - 146,636,326 (-)NCBI
RefSeq Acc Id: XM_054351855   ⟹   XP_054207830
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.05146,618,597 - 146,638,564 (-)NCBI
RefSeq Acc Id: NP_001025040   ⟸   NM_001029869
- UniProtKB: A1L4L8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005268438   ⟸   XM_005268381
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011535873   ⟸   XM_011537571
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSP00000309087   ⟸   ENST00000311450
Ensembl Acc Id: ENSP00000423992   ⟸   ENST00000512998
RefSeq Acc Id: XP_054207828   ⟸   XM_054351853
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054207830   ⟸   XM_054351855
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054207829   ⟸   XM_054351854
- Peptide Label: isoform X2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A1L4L8-F1-model_v2 AlphaFold A1L4L8 1-177 view protein structure

Promoters
RGD ID:6871116
Promoter ID:EPDNEW_H8722
Type:initiation region
Name:PLAC8L1_1
Description:PLAC8 like 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh385146,104,396 - 146,104,456EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:31746 AgrOrtholog
COSMIC PLAC8L1 COSMIC
Ensembl Genes ENSG00000173261 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000311450 ENTREZGENE
  ENST00000311450.9 UniProtKB/Swiss-Prot
  ENST00000512998.1 UniProtKB/TrEMBL
GTEx ENSG00000173261 GTEx
HGNC ID HGNC:31746 ENTREZGENE
Human Proteome Map PLAC8L1 Human Proteome Map
InterPro PLAC_motif_containing UniProtKB/Swiss-Prot
KEGG Report hsa:153770 UniProtKB/Swiss-Prot
NCBI Gene PLAC8L1 ENTREZGENE
PANTHER PLAC8-LIKE PROTEIN 1 UniProtKB/Swiss-Prot
  PTHR15907 UniProtKB/Swiss-Prot
Pfam PLAC8 UniProtKB/Swiss-Prot
PharmGKB PA134890176 PharmGKB
UniProt A1L4L8 ENTREZGENE
  D6RBV4_HUMAN UniProtKB/TrEMBL
  PL8L1_HUMAN UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-28 PLAC8L1  PLAC8 like 1    PLAC8-like 1  Symbol and/or name change 5135510 APPROVED