GRPEL2 (GrpE like 2, mitochondrial) - Rat Genome Database

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Gene: GRPEL2 (GrpE like 2, mitochondrial) Homo sapiens
Analyze
Symbol: GRPEL2
Name: GrpE like 2, mitochondrial
RGD ID: 1342740
HGNC Page HGNC:21060
Description: Predicted to enable adenyl-nucleotide exchange factor activity and unfolded protein binding activity. Predicted to be involved in protein import into mitochondrial matrix. Located in mitochondrion.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: DKFZp451C205; FLJ23713; FLJ33918; grpE protein homolog 2, mitochondrial; GrpE-like 2, mitochondrial; Mt-GrpE#2
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: GRPEL2P1   GRPEL2P2   GRPEL2P3  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385149,345,499 - 149,354,583 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5149,345,430 - 149,354,583 (+)EnsemblGRCh38hg38GRCh38
GRCh375148,725,062 - 148,734,146 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365148,705,170 - 148,714,339 (+)NCBINCBI36Build 36hg18NCBI36
Build 345148,705,284 - 148,714,338NCBI
Celera5144,806,966 - 144,816,121 (+)NCBICelera
Cytogenetic Map5q32NCBI
HuRef5143,871,317 - 143,880,469 (+)NCBIHuRef
CHM1_15148,157,397 - 148,166,568 (+)NCBICHM1_1
T2T-CHM13v2.05149,880,331 - 149,889,398 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Unlocking the presequence import pathway. Schulz C, etal., Trends Cell Biol. 2015 May;25(5):265-75. doi: 10.1016/j.tcb.2014.12.001. Epub 2014 Dec 23.
Additional References at PubMed
PMID:9694873   PMID:10339406   PMID:12477932   PMID:14702039   PMID:15489334   PMID:17207965   PMID:18029348   PMID:19322201   PMID:20877624   PMID:21873635   PMID:26186194   PMID:28380382  
PMID:28514442   PMID:28848044   PMID:29229926   PMID:30098457   PMID:31182584   PMID:33080218   PMID:33961781   PMID:34800366   PMID:34884508   PMID:35563538   PMID:35575683   PMID:35831314  
PMID:36758106   PMID:39445986  


Genomics

Comparative Map Data
GRPEL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385149,345,499 - 149,354,583 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5149,345,430 - 149,354,583 (+)EnsemblGRCh38hg38GRCh38
GRCh375148,725,062 - 148,734,146 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365148,705,170 - 148,714,339 (+)NCBINCBI36Build 36hg18NCBI36
Build 345148,705,284 - 148,714,338NCBI
Celera5144,806,966 - 144,816,121 (+)NCBICelera
Cytogenetic Map5q32NCBI
HuRef5143,871,317 - 143,880,469 (+)NCBIHuRef
CHM1_15148,157,397 - 148,166,568 (+)NCBICHM1_1
T2T-CHM13v2.05149,880,331 - 149,889,398 (+)NCBIT2T-CHM13v2.0
Grpel2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391861,845,495 - 61,860,068 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1861,845,495 - 61,859,396 (-)EnsemblGRCm39 Ensembl
GRCm381861,712,424 - 61,726,358 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1861,712,424 - 61,726,325 (-)EnsemblGRCm38mm10GRCm38
MGSCv371861,872,078 - 61,885,985 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361861,837,793 - 61,851,700 (-)NCBIMGSCv36mm8
Celera1862,997,997 - 63,011,843 (-)NCBICelera
Cytogenetic Map18E1NCBI
cM Map1834.69NCBI
Grpel2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81857,438,168 - 57,450,408 (-)NCBIGRCr8
mRatBN7.21855,167,831 - 55,180,073 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1855,168,209 - 55,180,180 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1857,261,339 - 57,273,589 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01857,975,976 - 57,988,238 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01855,791,694 - 55,803,936 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01857,037,995 - 57,050,234 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1857,036,877 - 57,050,408 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01856,266,330 - 56,278,569 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41857,691,610 - 57,703,850 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1853,316,882 - 53,329,122 (-)NCBICelera
Cytogenetic Map18q12.1NCBI
Grpel2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049558531,442 - 9,278 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049558531,443 - 9,278 (+)NCBIChiLan1.0ChiLan1.0
GRPEL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24144,575,752 - 144,585,237 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15142,715,494 - 142,724,786 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05144,771,261 - 144,780,987 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15150,781,671 - 150,791,377 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5150,781,671 - 150,791,377 (+)Ensemblpanpan1.1panPan2
GRPEL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1459,603,384 - 59,614,491 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl459,590,167 - 59,614,584 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha459,368,354 - 59,379,461 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0460,085,904 - 60,097,014 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl460,072,413 - 60,097,107 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1459,872,515 - 59,883,621 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0459,986,909 - 59,997,951 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0460,517,526 - 60,528,629 (-)NCBIUU_Cfam_GSD_1.0
Grpel2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213143,937,230 - 143,948,617 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365045,511,186 - 5,522,614 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365045,511,203 - 5,522,553 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GRPEL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2150,511,178 - 150,520,462 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12150,510,520 - 150,520,013 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22157,276,628 - 157,283,071 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GRPEL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12351,963,532 - 51,970,251 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603425,773,516 - 25,782,645 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Grpel2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247748,702,969 - 8,715,502 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247748,702,833 - 8,713,901 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GRPEL2
20 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 5q23.3-33.2(chr5:130860928-155321811)x3 copy number gain See cases [RCV000051193] Chr5:130860928..155321811 [GRCh38]
Chr5:130196621..154701371 [GRCh37]
Chr5:130224520..154681564 [NCBI36]
Chr5:5q23.3-33.2
pathogenic
GRCh38/hg38 5q21.3-33.2(chr5:106619588-156124387)x1 copy number loss See cases [RCV000053524] Chr5:106619588..156124387 [GRCh38]
Chr5:105955289..155551397 [GRCh37]
Chr5:105983188..155483975 [NCBI36]
Chr5:5q21.3-33.2
pathogenic
NM_152407.3(GRPEL2):c.77+800T>C single nucleotide variant Lung cancer [RCV000095380] Chr5:149346416 [GRCh38]
Chr5:148725979 [GRCh37]
Chr5:5q32
uncertain significance
GRCh38/hg38 5q23.3-33.2(chr5:129847794-153353546)x3 copy number gain See cases [RCV000138808] Chr5:129847794..153353546 [GRCh38]
Chr5:129183487..152733106 [GRCh37]
Chr5:129211386..152713299 [NCBI36]
Chr5:5q23.3-33.2
pathogenic
GRCh38/hg38 5q31.3-32(chr5:141089988-149530678)x3 copy number gain See cases [RCV000139504] Chr5:141089988..149530678 [GRCh38]
Chr5:140469572..148910241 [GRCh37]
Chr5:140449756..148890434 [NCBI36]
Chr5:5q31.3-32
pathogenic
GRCh37/hg19 5q15-35.3(chr5:94844077-178830410)x3 copy number gain not provided [RCV000487658] Chr5:94844077..178830410 [GRCh37]
Chr5:5q15-35.3
likely benign
GRCh37/hg19 5q23.3-33.3(chr5:130125085-157574910)x3 copy number gain See cases [RCV000449349] Chr5:130125085..157574910 [GRCh37]
Chr5:5q23.3-33.3
pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:113577-180719789) copy number gain See cases [RCV000510723] Chr5:113577..180719789 [GRCh37]
Chr5:5p15.33-q35.3
pathogenic
GRCh37/hg19 5q21.3-35.3(chr5:106716357-180687338)x3 copy number gain See cases [RCV000448245] Chr5:106716357..180687338 [GRCh37]
Chr5:5q21.3-35.3
pathogenic
GRCh37/hg19 5q31.3-32(chr5:141113273-149154835)x1 copy number loss See cases [RCV000510497] Chr5:141113273..149154835 [GRCh37]
Chr5:5q31.3-32
pathogenic
NC_000005.9:g.(?_86400000)_(154000000_?)del deletion Familial adenomatous polyposis 1 [RCV004561496]|Hereditary cancer-predisposing syndrome [RCV000554476] Chr5:86400000..154000000 [GRCh37]
Chr5:5q14.3-33.2
pathogenic
GRCh37/hg19 5p15.1-q35.2(chr5:17628741-176575720)x1 copy number loss See cases [RCV000511978] Chr5:17628741..176575720 [GRCh37]
Chr5:5p15.1-q35.2
pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:113577-180719789)x3 copy number gain See cases [RCV000512039] Chr5:113577..180719789 [GRCh37]
Chr5:5p15.33-q35.3
pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:13648-180905029)x3 copy number gain not provided [RCV000744317] Chr5:13648..180905029 [GRCh37]
Chr5:5p15.33-q35.3
pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:25328-180693344)x3 copy number gain not provided [RCV000744323] Chr5:25328..180693344 [GRCh37]
Chr5:5p15.33-q35.3
pathogenic
Single allele deletion Neurodevelopmental disorder [RCV000787436] Chr5:14685137..149511942 [GRCh37]
Chr5:5p15.2-q32
uncertain significance
GRCh37/hg19 5q31.3-32(chr5:140424333-148985999)x3 copy number gain not provided [RCV000848228] Chr5:140424333..148985999 [GRCh37]
Chr5:5q31.3-32
uncertain significance
GRCh37/hg19 5q23.3-33.3(chr5:130125085-157574910) copy number gain not specified [RCV002053526] Chr5:130125085..157574910 [GRCh37]
Chr5:5q23.3-33.3
pathogenic
NC_000005.9:g.(?_147774340)_(149681936_?)del deletion not provided [RCV003116332] Chr5:147774340..149681936 [GRCh37]
Chr5:5q32
uncertain significance
GRCh37/hg19 5q32(chr5:147164969-149315489)x1 copy number loss not provided [RCV002473891] Chr5:147164969..149315489 [GRCh37]
Chr5:5q32
pathogenic
NM_152407.4(GRPEL2):c.199G>A (p.Val67Ile) single nucleotide variant not specified [RCV004147356] Chr5:149348393 [GRCh38]
Chr5:148727956 [GRCh37]
Chr5:5q32
likely benign
NM_152407.4(GRPEL2):c.181G>A (p.Ala61Thr) single nucleotide variant not specified [RCV004109477] Chr5:149348375 [GRCh38]
Chr5:148727938 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.163C>G (p.Pro55Ala) single nucleotide variant not specified [RCV004228221] Chr5:149348357 [GRCh38]
Chr5:148727920 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.272G>A (p.Arg91Lys) single nucleotide variant not specified [RCV004122870] Chr5:149349694 [GRCh38]
Chr5:148729257 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.67T>C (p.Trp23Arg) single nucleotide variant not specified [RCV004238948] Chr5:149345606 [GRCh38]
Chr5:148725169 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.23C>T (p.Ala8Val) single nucleotide variant not specified [RCV004088776] Chr5:149345562 [GRCh38]
Chr5:148725125 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.324T>G (p.Ser108Arg) single nucleotide variant not specified [RCV004318222] Chr5:149350928 [GRCh38]
Chr5:148730491 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.86C>T (p.Pro29Leu) single nucleotide variant not specified [RCV004260816] Chr5:149348280 [GRCh38]
Chr5:148727843 [GRCh37]
Chr5:5q32
likely benign
NM_152407.4(GRPEL2):c.44G>A (p.Arg15His) single nucleotide variant not specified [RCV004258444] Chr5:149345583 [GRCh38]
Chr5:148725146 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.134G>A (p.Arg45His) single nucleotide variant not specified [RCV004396119] Chr5:149348328 [GRCh38]
Chr5:148727891 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.245G>A (p.Arg82Lys) single nucleotide variant not specified [RCV004396120] Chr5:149349667 [GRCh38]
Chr5:148729230 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.163C>T (p.Pro55Ser) single nucleotide variant not specified [RCV004928426] Chr5:149348357 [GRCh38]
Chr5:148727920 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.325T>C (p.Phe109Leu) single nucleotide variant not specified [RCV004924806] Chr5:149350929 [GRCh38]
Chr5:148730492 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.617A>G (p.His206Arg) single nucleotide variant not specified [RCV004924803] Chr5:149351221 [GRCh38]
Chr5:148730784 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.133C>T (p.Arg45Cys) single nucleotide variant not specified [RCV004924804] Chr5:149348327 [GRCh38]
Chr5:148727890 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.392C>T (p.Ser131Leu) single nucleotide variant not specified [RCV004924805] Chr5:149350996 [GRCh38]
Chr5:148730559 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.612A>C (p.Lys204Asn) single nucleotide variant not specified [RCV004924807] Chr5:149351216 [GRCh38]
Chr5:148730779 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.373G>C (p.Glu125Gln) single nucleotide variant not specified [RCV004928424] Chr5:149350977 [GRCh38]
Chr5:148730540 [GRCh37]
Chr5:5q32
uncertain significance
NM_152407.4(GRPEL2):c.379A>C (p.Ile127Leu) single nucleotide variant not specified [RCV004928425] Chr5:149350983 [GRCh38]
Chr5:148730546 [GRCh37]
Chr5:5q32
uncertain significance
miRNA Target Status (No longer updated)

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR21hsa-miR-21-5pTarbaseexternal_infoSequencingPOSITIVE

Predicted Target Of
Summary Value
Count of predictions:1675
Count of miRNA genes:914
Interacting mature miRNAs:1099
Transcripts:ENST00000329271, ENST00000416916, ENST00000507562, ENST00000513661
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357314AASTH54_HAllergic/atopic asthma related QTL 54 (human)3.560.0003Reversible airflow obstructiontotal serum IgE5135892246150155845Human

Markers in Region
STS-W61302  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375148,733,873 - 148,734,100UniSTSGRCh37
Build 365148,714,066 - 148,714,293RGDNCBI36
Celera5144,815,848 - 144,816,075RGD
Cytogenetic Map5q32UniSTS
HuRef5143,880,196 - 143,880,423UniSTS
GeneMap99-GB4 RH Map5570.45UniSTS
NCBI RH Map5891.6UniSTS
RH35851  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375148,733,873 - 148,734,000UniSTSGRCh37
Build 365148,714,066 - 148,714,193RGDNCBI36
Celera5144,815,848 - 144,815,975RGD
Cytogenetic Map5q32UniSTS
HuRef5143,880,196 - 143,880,323UniSTS
GeneMap99-GB4 RH Map5571.56UniSTS
NCBI RH Map5891.6UniSTS
WI-20933  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375148,733,770 - 148,734,047UniSTSGRCh37
GRCh37X63,908,515 - 63,908,797UniSTSGRCh37
Build 36X63,825,240 - 63,825,522RGDNCBI36
CeleraX64,255,325 - 64,255,607RGD
Celera5144,815,745 - 144,816,022UniSTS
Cytogenetic Map5q32UniSTS
HuRefX57,732,121 - 57,732,403UniSTS
HuRef5143,880,093 - 143,880,370UniSTS
GeneMap99-GB4 RH Map5571.66UniSTS
Whitehead-RH Map5484.5UniSTS
NCBI RH Map5891.6UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1

Sequence


Ensembl Acc Id: ENST00000329271   ⟹   ENSP00000329558
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5149,345,499 - 149,354,583 (+)Ensembl
Ensembl Acc Id: ENST00000416916   ⟹   ENSP00000397302
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5149,345,502 - 149,351,654 (+)Ensembl
Ensembl Acc Id: ENST00000507562
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5149,345,619 - 149,354,583 (+)Ensembl
Ensembl Acc Id: ENST00000513661   ⟹   ENSP00000426331
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5149,345,430 - 149,349,858 (+)Ensembl
RefSeq Acc Id: NM_152407   ⟹   NP_689620
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385149,345,499 - 149,354,583 (+)NCBI
GRCh375148,724,364 - 148,734,146 (+)NCBI
Build 365148,705,170 - 148,714,339 (+)NCBI Archive
Celera5144,806,966 - 144,816,121 (+)RGD
HuRef5143,871,317 - 143,880,469 (+)ENTREZGENE
CHM1_15148,157,397 - 148,166,568 (+)NCBI
T2T-CHM13v2.05149,880,331 - 149,889,398 (+)NCBI
Sequence:
RefSeq Acc Id: NP_689620   ⟸   NM_152407
- Peptide Label: precursor
- UniProtKB: B4DFA6 (UniProtKB/Swiss-Prot),   Q49AJ6 (UniProtKB/Swiss-Prot),   Q8TAA5 (UniProtKB/Swiss-Prot),   Q8N3S0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000397302   ⟸   ENST00000416916
Ensembl Acc Id: ENSP00000329558   ⟸   ENST00000329271
Ensembl Acc Id: ENSP00000426331   ⟸   ENST00000513661

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8TAA5-F1-model_v2 AlphaFold Q8TAA5 1-225 view protein structure

Promoters
RGD ID:6803235
Promoter ID:HG_KWN:51483
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_152407
Position:
Human AssemblyChrPosition (strand)Source
Build 365148,704,596 - 148,705,257 (+)MPROMDB
RGD ID:6871304
Promoter ID:EPDNEW_H8769
Type:initiation region
Name:GRPEL2_1
Description:GrpE like 2, mitochondrial
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh385149,345,519 - 149,345,579EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:21060 AgrOrtholog
COSMIC GRPEL2 COSMIC
Ensembl Genes ENSG00000164284 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000329271 ENTREZGENE
  ENST00000329271.8 UniProtKB/Swiss-Prot
  ENST00000416916.2 UniProtKB/Swiss-Prot
Gene3D-CATH 2.30.22.10 UniProtKB/Swiss-Prot
  3.90.20.20 UniProtKB/Swiss-Prot
GTEx ENSG00000164284 GTEx
HGNC ID HGNC:21060 ENTREZGENE
Human Proteome Map GRPEL2 Human Proteome Map
InterPro GrpE UniProtKB/Swiss-Prot
  GrpE_coiled_coil UniProtKB/Swiss-Prot
  GrpE_head UniProtKB/Swiss-Prot
KEGG Report hsa:134266 UniProtKB/Swiss-Prot
NCBI Gene 134266 ENTREZGENE
OMIM 618545 OMIM
PANTHER GRPE PROTEIN HOMOLOG 2, MITOCHONDRIAL UniProtKB/Swiss-Prot
  PTHR21237 UniProtKB/Swiss-Prot
Pfam GrpE UniProtKB/Swiss-Prot
PharmGKB PA134885090 PharmGKB
PRINTS GRPEPROTEIN UniProtKB/Swiss-Prot
PROSITE GRPE UniProtKB/Swiss-Prot
Superfamily-SCOP SSF51064 UniProtKB/Swiss-Prot
  SSF58014 UniProtKB/Swiss-Prot
UniProt B4DFA6 ENTREZGENE
  D6RGI6_HUMAN UniProtKB/TrEMBL
  GRPE2_HUMAN UniProtKB/Swiss-Prot
  Q49AJ6 ENTREZGENE
  Q8N3S0 ENTREZGENE, UniProtKB/TrEMBL
  Q8TAA5 ENTREZGENE
UniProt Secondary B4DFA6 UniProtKB/Swiss-Prot
  Q49AJ6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-26 GRPEL2  GrpE like 2, mitochondrial    GrpE-like 2, mitochondrial (E. coli)  Symbol and/or name change 5135510 APPROVED