LOC111090910 (V-type proton ATPase subunit G 1-like) - Rat Genome Database

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Gene: LOC111090910 (V-type proton ATPase subunit G 1-like) Canis lupus familiaris
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Symbol: LOC111090910
Name: V-type proton ATPase subunit G 1-like
RGD ID: 13386605
Description: ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (inferred); INVOLVED IN proton transmembrane transport (inferred); FOUND IN endomembrane system (inferred); vacuolar proton-transporting V-type ATPase complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: V-type proton ATPase subunit G 1 pseudogene
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11817,137,094 - 17,139,037 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1816,796,214 - 16,797,607 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01817,456,237 - 17,457,580 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11817,208,608 - 17,210,035 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01817,147,339 - 17,148,740 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01817,416,209 - 17,417,609 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC111090910
27 total Variants

Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_038423901   ⟹   XP_038279829
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01817,456,237 - 17,457,580 (+)NCBI
RefSeq Acc Id: XM_038454183   ⟹   XP_038310111
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1816,796,214 - 16,797,607 (+)NCBI
RefSeq Acc Id: XM_038500262   ⟹   XP_038356190
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11817,208,608 - 17,210,035 (+)NCBI
RefSeq Acc Id: XM_038562808   ⟹   XP_038418736
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01817,416,209 - 17,417,609 (+)NCBI
RefSeq Acc Id: XM_038626931   ⟹   XP_038482859
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01817,147,339 - 17,148,740 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038279829 (Get FASTA)   NCBI Sequence Viewer  
  XP_038310111 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356190 (Get FASTA)   NCBI Sequence Viewer  
  XP_038418736 (Get FASTA)   NCBI Sequence Viewer  
  XP_038482859 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00030008307.1
RefSeq Acc Id: XP_038356190   ⟸   XM_038500262
RefSeq Acc Id: XP_038482859   ⟸   XM_038626931
RefSeq Acc Id: XP_038279829   ⟸   XM_038423901
- UniProtKB: A0A8C0M9G0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038310111   ⟸   XM_038454183
- UniProtKB: A0A8C0M9G0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038418736   ⟸   XM_038562808
- UniProtKB: A0A8C0M9G0 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00030005166 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00030009495.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.2950 UniProtKB/TrEMBL
InterPro V-ATPase_G UniProtKB/TrEMBL
NCBI Gene LOC111090910 ENTREZGENE
PANTHER V-TYPE PROTON ATPASE SUBUNIT G 2 UniProtKB/TrEMBL
  VACUOLAR ATP SYNTHASE SUBUNIT G UniProtKB/TrEMBL
Pfam V-ATPase_G UniProtKB/TrEMBL
UniProt A0A8C0M9G0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-12 LOC111090910  V-type proton ATPase subunit G 1-like  LOC111090910  V-type proton ATPase subunit G 1 pseudogene  Symbol and/or name change 5135510 APPROVED