Ccdc39 (coiled-coil domain containing 39)

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Gene: Ccdc39 (coiled-coil domain containing 39) Mus musculus

Analyze

Symbol:

Ccdc39

Name:

coiled-coil domain containing 39

RGD ID:

1332183

MGI Page

MGI

Description:

Acts upstream of or within several processes, including cerebrospinal fluid circulation; establishment of left/right asymmetry; and inner dynein arm assembly. Located in 9+2 motile cilium and cytosol. Is expressed in several structures, including central nervous system; ileum; male reproductive gland or organ; respiratory system; and secondary heart field. Used to study Kartagener syndrome; hydrocephalus; primary ciliary dyskinesia 14; and visceral heterotaxy. Human ortholog(s) of this gene implicated in primary ciliary dyskinesia 14. Orthologous to human CCDC39 (coiled-coil domain containing 39).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

4921507O14Rik; AI447426; AI844750; b2b1304C; b2b1304Clo; b2b1735C; b2b1735Clo; b2b2025.1Clo; coiled-coil domain-containing protein 39; D3Ertd789; D3Ertd789e; expressed sequence AI844750; p; prh

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CCDC39 (coiled-coil domain containing 39)	HGNC	HGNC, HomoloGene, NCBI, Panther
Rattus norvegicus (Norway rat):	Ccdc39 (coiled-coil domain containing 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ccdc39 (coiled-coil domain containing 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CCDC39 (coiled-coil domain containing 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CCDC39 (coiled-coil domain containing 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ccdc39 (coiled-coil domain containing 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CCDC39 (coiled-coil domain containing 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CCDC39 (coiled-coil domain containing 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ccdc39 (coiled-coil domain containing 39)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CEP128 (centrosomal protein 128)	HGNC	PhylomeDB
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Ccdc39 (coiled-coil domain containing 39)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CCDC39 (coiled-coil domain containing 39)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ccdc39 (coiled-coil domain containing 39)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG17387	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	ccdc39	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	33,864,906 - 33,898,473 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	33,866,511 - 33,898,459 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	33,810,757 - 33,844,325 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	33,812,362 - 33,844,310 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	33,711,283 - 33,743,232 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	34,003,911 - 34,035,850 (-)	NCBI		MGSCv36	mm8
Celera	3	33,711,582 - 33,743,117 (-)	NCBI		Celera
Cytogenetic Map	3	A3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

3-methylglutaconic aciduria type 5 (ISO)

autism spectrum disorder (ISO)

Currarino syndrome (ISO)

Ellis-Van Creveld syndrome (ISO)

Fibrous Sheath Dysplasia (ISO)

genetic disease (ISO)

hydrocephalus (IAGP,ISO)

infertility (ISO)

Kartagener syndrome (IAGP)

primary ciliary dyskinesia (ISO)

primary ciliary dyskinesia 14 (IAGP,ISO)

situs inversus (ISO)

syndromic microphthalmia 3 (ISO)

Ventriculomegaly (ISO)

visceral heterotaxy (IAGP,ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4,4'-sulfonyldiphenol (EXP)

6-propyl-2-thiouracil (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

auramine O (ISO)

benzo[a]pyrene (EXP)

bisphenol A (EXP,ISO)

cadmium dichloride (EXP)

carbon nanotube (EXP)

Cuprizon (ISO)

decabromodiphenyl ether (ISO)

furan (ISO)

gentamycin (ISO)

monosodium L-glutamate (EXP)

nitrofen (ISO)

ozone (EXP)

silicon dioxide (EXP)

sodium fluoride (EXP)

tetrachloromethane (EXP)

tetraphene (EXP)

titanium dioxide (EXP)

trichloroethene (ISO)

trichostatin A (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axonemal dynein complex assembly (ISO)

brain development (IMP)

cerebrospinal fluid circulation (IMP)

cilium movement (ISO)

cilium-dependent cell motility (IBA,ISO)

determination of digestive tract left/right asymmetry (ISO)

determination of left/right symmetry (IMP)

determination of liver left/right asymmetry (ISO)

determination of pancreatic left/right asymmetry (ISO)

epithelial cilium movement involved in determination of left/right asymmetry (IBA,ISO)

epithelial cilium movement involved in extracellular fluid movement (IMP)

establishment of left/right asymmetry (IMP)

establishment of localization in cell (IMP)

flagellated sperm motility (ISO)

heart development (IMP)

heart looping (ISO)

inner dynein arm assembly (IBA,IMP,ISO)

lung development (ISO)

motile cilium assembly (ISO)

protein localization to cilium (IMP)

regulation of cilium beat frequency (ISO)

Cellular Component

9+2 motile cilium (EXP)

axoneme (IBA,ISO)

cell projection (IEA)

cilium (ISO)

cytoplasm (IEA)

cytoskeleton (IEA)

cytosol (IDA)

Molecular Function

molecular_function (ND)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abdominal situs ambiguus (IEA)

abdominal situs inversus (IEA)

abnormal aortic arch morphology (IEA)

abnormal brain development (IAGP)

abnormal brain ependyma motile cilium morphology (IAGP)

abnormal brain ependyma motile cilium physiology (IAGP)

abnormal cerebrospinal fluid flow (IAGP)

abnormal cortical ventricular zone morphology (IAGP)

abnormal inferior vena cava morphology (IEA)

abnormal liver morphology (IEA)

abnormal postnatal subventricular zone morphology (IAGP)

absent spleen (IEA)

atrial septal defect (IEA)

atrioventricular septal defect (IEA)

decreased body weight (IAGP)

dextrocardia (IEA)

dilated lateral ventricle (IAGP)

dilated third ventricle (IAGP)

double outlet right ventricle (IEA)

double outlet right ventricle with atrioventricular septal defect (IEA)

double outlet right ventricle, Taussig bing type (IEA)

dual inferior vena cava (IEA)

dysmyelination (IAGP)

enlarged brain ventricles (IAGP)

enlarged lateral ventricles (IAGP)

gliosis (IAGP)

heterotaxia (IAGP)

hydrocephaly (IAGP)

hydronephrosis (IEA)

immotile respiratory cilia (IEA)

interrupted aortic arch (IEA)

left atrial isomerism (IEA)

left pulmonary isomerism (IEA)

micrognathia (IEA)

muscular ventricular septal defect (IEA)

overriding aortic valve (IEA)

perimembraneous ventricular septal defect (IEA)

polycystic kidney (IEA)

postnatal lethality, complete penetrance (IAGP)

preweaning lethality, incomplete penetrance (IEA)

right atrial isomerism (IEA)

right-sided stomach (IAGP)

situs inversus totalis (IAGP)

small olfactory bulb (IAGP)

spleen hypoplasia (IEA)

superior-inferior ventricles (IEA)

transposition of great arteries (IEA)

vascular ring (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Impaired neural differentiation and glymphatic CSF flow in the Ccdc39 rat model of neonatal hydrocephalus: genetic interaction with L1cam.	Emmert AS, etal., Dis Model Mech. 2019 Nov 21;12(11). pii: 12/11/dmm040972. doi: 10.1242/dmm.040972.
2.	Electronic Transfer of Homolog Data	MGD and Homologene mouse data transfer
3.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
4.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10725249	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11125038	PMID:11217851	PMID:12466851	PMID:12477932	PMID:16141072	PMID:16141073
PMID:17971504	PMID:21267068	PMID:21515572	PMID:21677750	PMID:21873635	PMID:24194600	PMID:25807483	PMID:27340223	PMID:28289722	PMID:29317443	PMID:32098917	PMID:32325033

Genomics

Comparative Map Data

Ccdc39
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	33,864,906 - 33,898,473 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	33,866,511 - 33,898,459 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	33,810,757 - 33,844,325 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	33,812,362 - 33,844,310 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	33,711,283 - 33,743,232 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	34,003,911 - 34,035,850 (-)	NCBI		MGSCv36	mm8
Celera	3	33,711,582 - 33,743,117 (-)	NCBI		Celera
Cytogenetic Map	3	A3	NCBI

CCDC39
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	180,614,008 - 180,679,489 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	3	180,602,858 - 180,684,942 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	180,331,796 - 180,397,277 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	181,814,490 - 181,879,977 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	178,763,919 - 178,829,392 (-)	NCBI		Celera
Cytogenetic Map	3	q26.33	NCBI
HuRef	3	177,736,230 - 177,801,706 (-)	NCBI		HuRef
CHM1_1	3	180,295,002 - 180,360,497 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	183,415,869 - 183,481,362 (-)	NCBI		T2T-CHM13v2.0

Ccdc39
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	2	116,665,261 - 116,703,364 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	116,665,261 - 116,703,350 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	123,255,155 - 123,293,114 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	2	121,367,846 - 121,405,805 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	2	116,006,726 - 116,044,684 (-)	NCBI	Rnor_WKY
Rnor_6.0	2	120,278,605 - 120,367,829 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	120,278,605 - 120,316,600 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	139,933,049 - 139,971,476 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	120,117,112 - 120,154,958 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	120,063,147 - 120,160,273 (-)	NCBI
Celera	2	111,715,097 - 111,753,041 (-)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

Ccdc39
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	9,690,295 - 9,727,835 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	9,689,076 - 9,727,806 (-)	NCBI	ChiLan1.0	ChiLan1.0

CCDC39
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	3	178,478,552 - 178,546,943 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	177,640,127 - 177,705,885 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	185,811,581 - 185,878,362 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	185,813,245 - 185,878,362 (-)	Ensembl	panpan1.1		panPan2

CCDC39
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	13,915,763 - 13,959,574 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	13,905,434 - 13,959,340 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	17,997,731 - 18,042,006 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	13,816,636 - 13,860,663 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	13,817,526 - 13,860,510 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	13,861,026 - 13,905,119 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	13,841,017 - 13,885,062 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	14,089,242 - 14,133,306 (-)	NCBI		UU_Cfam_GSD_1.0

Ccdc39
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	110,557,085 - 110,610,035 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936566	2,610,756 - 2,663,657 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCDC39
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	118,626,330 - 118,682,281 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	118,623,787 - 118,773,205 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	127,828,111 - 127,901,388 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CCDC39
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	8,730,456 - 8,789,379 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	8,731,278 - 8,788,523 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	17,563,089 - 17,622,222 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ccdc39
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	58,436,469 - 58,471,799 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	58,436,427 - 58,471,926 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Ccdc39
1216 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	458
Count of miRNA genes:	354
Interacting mature miRNAs:	404
Transcripts:	ENSMUST00000029222, ENSMUST00000125845, ENSMUST00000127844, ENSMUST00000135728, ENSMUST00000154577
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
26884436	Zlq3_m	zygomatic length QTL 3, 10 week (mouse)					3	3265060	142405761	Mouse
1300559	Thypr3_m	thymocyte proliferative response 3 (mouse)			Not determined		3	4525419	38525519	Mouse
1558925	Hivan1_m	HIV-associated nephropathy 1 (mouse)			Not determined		3	7586174	68716946	Mouse
4142399	Aec1_m	autoimmune exocrinopathy 1 (mouse)			Not determined			7586174	102690034	Mouse
4141116	Lgaq4_m	late growth adjusted QTL 4 (mouse)			Not determined			10249221	83184946	Mouse
4141255	W10q3_m	weight 10 weeks QTL 3 (mouse)			Not determined			10249221	83184946	Mouse
4141563	Lgq3_m	late growth QTL 3 (mouse)			Not determined			10249221	83184946	Mouse
39128206	Lwq18_m	liver weight QTL 18 (mouse)					3	10249221	83184946	Mouse
1357584	Splq6_m	spleen weight QTL 6 (mouse)			Not determined		3	10249221	83184946	Mouse
1357440	Hrtpq1_m	heart weight percentage QTL 1 (mouse)			Not determined		3	10249221	83184946	Mouse
1301358	Eae20_m	experimental allergic encephalomyelitis 20 (mouse)			Not determined		3	11630453	45630591	Mouse
26884427	Cvht4_m	cranial vault height 4, 10 week (mouse)					3	16054164	109707316	Mouse
13207570	Tcq12_m	total cholesterol QTL 12 (mouse)					3	16504164	130163649	Mouse
4142092	Tgq13_m	triglyceride QTL 13 (mouse)			Not determined			18288168	52288168	Mouse
1301114	Ssial2_m	susceptibility to sialadenitis 2 (mouse)			Not determined		3	20174862	54180103	Mouse
26884422	Cvht7_m	cranial vault height 7, 16 week (mouse)					3	28954149	118893649	Mouse
1302056	Orgwq4_m	organ weight QTL 4 (mouse)			Not determined		3	30067588	147304689	Mouse
1300961	Bh4p_m	bar holding four paws (mouse)			Not determined		3	31837854	65837997	Mouse
12910778	Pwgrq13_m	post-weaning growth rate QTL 13 (mouse)					3	32635760	58017363	Mouse
12910781	Pwgrq12_m	post-weaning growth rate QTL 12 (mouse)					3	32635760	58017363	Mouse
1357689	Mdmsc1_m	modifier of muscularity 1 (mouse)			Not determined		3	33327201	45916479	Mouse
10412073	Ssen2_m	suseptibility to Sendai virus 2 (mouse)			Not determined		3	33535465	67535615	Mouse
9587784	Afw13_m	abdominal fat weight QTL 13 (mouse)			Not determined		3	33752045	67752228	Mouse
10043882	Bwtq13_m	body weight QTL 13 (mouse)			Not determined		3	33752045	67752228	Mouse

Markers in Region

BE456625

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	3	33,813,512 - 33,813,594	UniSTS	GRCm38
MGSCv37	3	33,712,434 - 33,712,516	UniSTS	GRCm37
Celera	3	33,712,733 - 33,712,815	UniSTS
Cytogenetic Map	3	A3	UniSTS
Cytogenetic Map	3	B	UniSTS
Whitehead/MRC_RH	3	374.08	UniSTS

AI844750

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	3	33,838,243 - 33,838,360	UniSTS	GRCm38
MGSCv37	3	33,737,165 - 33,737,282	UniSTS	GRCm37
Celera	3	33,737,040 - 33,737,157	UniSTS
Cytogenetic Map	3	A3	UniSTS
Whitehead/MRC_RH	3	352.34	UniSTS

AI447426

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	3	33,812,463 - 33,812,555	UniSTS	GRCm38
MGSCv37	3	33,711,385 - 33,711,477	UniSTS	GRCm37
Celera	3	33,711,684 - 33,711,776	UniSTS
Cytogenetic Map	3	A3	UniSTS
Cytogenetic Map	3	B	UniSTS
Whitehead/MRC_RH	3	372.84	UniSTS

UniSTS:234657

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	3	33,814,000 - 33,814,303	UniSTS	GRCm38
MGSCv37	3	33,712,922 - 33,713,225	UniSTS	GRCm37
Celera	3	33,713,221 - 33,713,524	UniSTS
Cytogenetic Map	3	A3	UniSTS
Cytogenetic Map	3	B	UniSTS

D3Ertd789e

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	3	33,812,486 - 33,812,691	UniSTS	GRCm38
MGSCv37	3	33,711,408 - 33,711,613	UniSTS	GRCm37
Celera	3	33,711,707 - 33,711,912	UniSTS
Cytogenetic Map	3	B	UniSTS
Cytogenetic Map	3	A3	UniSTS
cM Map	3		UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_026222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006535498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006535499	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006535500	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011249686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001783715	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_003954357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_003954358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_003954359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC154395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK007153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK014839	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK029948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK030087	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK083226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK162849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK163953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC138917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC138920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000029222 ⟹ ENSMUSP00000029222

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	33,866,511 - 33,898,450 (-)	Ensembl
GRCm38.p6 Ensembl	3	33,812,362 - 33,844,301 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000197230

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	33,892,143 - 33,898,459 (-)	Ensembl
GRCm38.p6 Ensembl	3	33,837,994 - 33,844,310 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000200277

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	33,874,336 - 33,898,224 (-)	Ensembl
GRCm38.p6 Ensembl	3	33,820,187 - 33,844,075 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000200300

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	33,872,797 - 33,898,450 (-)	Ensembl
GRCm38.p6 Ensembl	3	33,818,648 - 33,844,301 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000200536

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	33,867,203 - 33,868,700 (-)	Ensembl
GRCm38.p6 Ensembl	3	33,813,054 - 33,814,551 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000200551

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	33,878,735 - 33,880,689 (-)	Ensembl
GRCm38.p6 Ensembl	3	33,824,586 - 33,826,540 (-)	Ensembl

RefSeq Acc Id:

NM_026222 ⟹ NP_080498

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	33,866,508 - 33,898,450 (-)	NCBI
GRCm38	3	33,812,361 - 33,844,310 (-)	NCBI
MGSCv37	3	33,711,283 - 33,743,232 (-)	RGD
Celera	3	33,711,582 - 33,743,117 (-)	RGD
cM Map	3		ENTREZGENE

Sequence:

show sequence

ACTAAGGGCGCCTGGCTGTTGCTAGGGCCGCGGAATACAGACGGTTAGGCTTGGCTGCGAGCTC
CAGGGAACGGTTTTGGGTGGCTTGTCTGTGATTCCTTTGAGCCTCGTACGCCATGTGCAGTGAG
TTCTTGTCAGAGCTGCACTGGGAAGATGGGTTCGCCATCCCCGTGGCCAATCAGGAGAACAAGA
TCCTGGAGGATCAGTTGGCAAAGCTCCGAGAGGAAAAATCAAACTTGCAAGATCAGCTTCATGA
CTATGAAGAACGAATTAATTCTATGACTTCTCACCTTAAAAATGTGAATCAGGAATTTTTATTT
ACACAGTCTCTTTACAAAGCAAGGGAGAGTGAGATCGAGAGCGAAGAACATTTTAAGGCCATTG
CTGAAAGAGAGCTGGGCCGAGTCAAGAATGAGACCCAACTGCTGGAGAAGGAGATGGCGATCAT
CCGGGAGCGCAAGAGCCAAATGGAAAACAATATATTTAAAACTACTCAAAAGCTGGATGACTTG
AAATGTCAGATGAACTGGGACCAGCAAGCCTTGGAGGCCTGGCTGGAAGAATCGGCTCACAAAG
ACAGTGACTCTCTGACCCTTCAGAAGTACTCTCAGCAAGACGATAACAAAATCAGGGCCCTGAC
TCTGCAGTTAGAAAAGCTGACCATGGAGTATAACGAGAAGAGGAAGCTTCTAGACAGTGAACTG
ACAGAGACGCTAAGTGCGCAGTTAGAATTAGATAAAGCTGCACAGGATTTCCGGAAGATTCACT
TAGAACGGCAGGAGCTCATTCAGCAGTGGGAGAACACCATTGAGCAGATGCAGAGGCGGGATCA
GGAGATAGACAACTGTGCCCTGGCATTATCACGAATAAAGCAGGAAGCAAGAGAAAAAGAAGGC
GTGGTGAAAGAGAAGATCAAGTTTCTGGAAAATGAGGTTGAGAACAACATAGAATACGAGAGAA
AAATTTCTGTTGCTGAGCGGAAAGTGTCCAAGTGCAGGATGGACTACCAGCGTCACGAAGGCAA
CAGAAGTCAGCTGAAGGATGAGCTGGATACTTTAAAAACCACTCTCAACAGAACATCCAGTGAC
TTACAAGCTCTGAGGAAAAACATTTCCAAAGTAAAGAAGGACATCTTTGACGAAACATTAAGAT
TACAAAAACTTAAACATCACAATGAGGTTGTAAAACATAAATTAAAGATGATAACTGAGAAGAC
CCTATCTATTGAAGAGAAAGCTACCAACATGGAAGACATGCTGAAGGAGGAGGAGAAAGGCCTG
AAGGAAGTGGAGGTTCAATTGGGCATAGTAAAAGACGTGTTATTTAAGAAAGTCCAAGAGTTAC
AGAACGAGATAGCGAAAGAGAAAGCCCTGGTATCAGAAATTGAAGGAACCCGTTCCTCCCTGAA
ACATCTTAACAAACAGTTACACAAACTGGATTTTGAAACCCTGAAGCAGCAGGAAATTATGTAC
AGTCAGGATTTTTACATTCAGCAAGTAGAACGCAGAATGTCACGATTAAAAGGAGAAATTAATT
CAGAGGAAAAGCAAGCCCTTGAAGCAAAAATCCTTGAACTTAAGAAGACAATGGATGAGAAAAA
ATCCACACTTTCCCTTTTGGAATCCCAGATCAAGAAGCTCCATAATGACCTCTACTTCATTAAG
AAATCAAATGGTAAAAACAATGATGAGAAAGAGTCTCTCATGAATAAAATAAGTGAACTGAACC
TTTTTATTGACAGATCTGAGAAGGAACTGAGCAAAGCCAAAGCTGTGAAAGAGGATATGATGAT
CGAGGACAATCTTTTAAAGCTTCAAGTTAAACGTGCTCGAGAATTGCTTTACAGCAAGGCAGAG
GAAGTCCTTTCTCTAGAGAAAAGGAAACAGCAGCTGGGCAAAGACATGGAAGAGAGAGCTGAAG
AAATTAAAGTGCACAAAGCCATGCTTACCTCACAGATCAGATGTGTTGAACAGCAGCGAAAAAC
TATGAGTTCTGAATTTCATGAGCGGCTAAGTAAAATTGATAAGCTTAAGAATAGATATGAAATT
CTTACTGTTGTCATGCTGCCTCCTGAAGGAGAAGAGGAGAAAACACAGTCCTATTATGTAATAA
AGGCTGCTCAAGAAAAAGAAGAACTTCAAAGGGAAGGTGATAGCTTGGATGCTAAGATCAACAA
AGCTGAAAAAGAAATCTATGCTTTGCAAAACACCTTGCAAGTACTTAACAGCTGCAACAGCAAT
TATAAGCAATCTTTCAAAAAAGTGACTCCGTCAAGTGATGAGTATGCATTAAAAATTCAACTAG
AAGAACAAAAAAGAACTGCAGATGAGAGATACAGATGCAAACAAAGGCAGATCAGAGAACTTCA
AGAAGATATCCAGAGCATGGAAAATACTTTTGAAGTTATAGGACACTTAGCAAATAATGCCAAA
GAGAAATTAACAGAGAAACAAACACTTGCATTTCAACTTCGTAAGGAGACTGAGGAGCAGAAGC
CGAAATTGCAGCGAATAACTAAGCAGTGTGGAAGACTCAGAAGAGAAATCCGCATTTTGAAACA
AACAGATAATGAAACTCTAGAAGAACAGGACATTCAGCTCCGTGAGATCATACAGTTTCACAAG
GACATTGACCAAATGTTAGTTAATGCCATGGAAAATGCAGAAATTCATGCCATCTTTAAAACAT
ATTTTGAGCAGAACGGGTTAGAACTACCTACAGCAAGAGGCCCGAGCTCGAGATCTTCTTCCCA
GTCTTCCTCCCTTTCATCATTCAGGTCGCTCGAGGATGTAACTCTCCAGTCTCCCCCCACAGCT
AAAGTGATACAGCTCAGATTCCCAGAGCCTCCTCCAGCAACAAATGACAGTTCTAGGTCAGCTA
GTAGTGGCAGTAATTCCAACATTCCTAAAGAAAAAAAGCTCAGCAAATGAACATGCTTTTTTTT
AAAAAAAAATCTTTTTATACATTTAGAACACAAATGAAAATCTTATTAATAGTTAAGTCTCTCT
CTTTTTCTGGGGCTTCATTTATTAATGATGCAGGCTTACTAAAATACTACCAAAAGTACAGAGC
AGACAAAAGTTCTGTACAGTGGCTATAAGAGCTGTCTGAGAAAAGAACAAAGGGAGTTTTGTGT
TTGTTTTTTTCCTACTGTTTTATTTATAGAGAAGGAAAACTGCAGAACCTTAGCCAAGCCACAT
GTGACAAAGCAGAGGGAAATAAGCAGGTTTTTTTTTTTTTTACTAGAACATGTCTACAGTGTTA
GATGTTTTATGAAGTAACACATTTATAAGATTCTTTCACTAATACACTTCTAAAGATTTATTCT
ATCTCTCAATAATGAAGTTTTCATTTACTCTAGATCACCAAACTACCTTTTAAAATAAAAAATA
AGCGAACAACTGTATTCTTCAGATGTTTTTAAGGGGGTTAACATGAGGGAGGAGCTTGGGAAAG
ACCATCTTTTGTTTATTTGTACTGTTTATAATGTGTAACCAAAACACAGCATCATTCCCACTCC
CTCAGGAAAAAGTTTAGTAAGAAAGACACTGTTTATGTATATGTACATATGCATTTGTCTCTAT
ATGTGCACAAATAAAGTGAAACCTAAGCTGTT

hide sequence

RefSeq Acc Id:

XM_006535498 ⟹ XP_006535561

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	33,864,906 - 33,898,471 (-)	NCBI
GRCm38	3	33,810,757 - 33,844,324 (-)	NCBI

Sequence:

show sequence

TCCTGTTTGGTAACTAAGGGCGCCTGGCTGTTGCTAGGGCCGCGGAATACAGACGGTTAGGCTT
GGCTGCGAGCTCCAGGGAACGGTTTTGGGTGGCTTGTCTGTGATTCCTTTGAGCCTCGTACGCC
ATGTGCAGTGAGTTCTTGTCAGAGCTGCACTGGGAAGATGGGTTCGCCATCCCCGTGGCCAATC
AGGAGAACAAGATCCTGGAGGATCAGTCTCTTTACAAAGCAAGGGAGAGTGAGATCGAGAGCGA
AGAACATTTTAAGGCCATTGCTGAAAGAGAGCTGGGCCGAGTCAAGAATGAGACCCAACTGCTG
GAGAAGGAGATGGCGATCATCCGGGAGCGCAAGAGCCAAATGGAAAACAATATATTTAAAACTA
CTCAAAAGCTGGATGACTTGAAATGTCAGATGAACTGGGACCAGCAAGCCTTGGAGGCCTGGCT
GGAAGAATCGGCTCACAAAGACAGTGACTCTCTGACCCTTCAGAAGTACTCTCAGCAAGACGAT
AACAAAATCAGGGCCCTGACTCTGCAGTTAGAAAAGCTGACCATGGAGTATAACGAGAAGAGGA
AGCTTCTAGACAGTGAACTGACAGAGACGCTAAGTGCGCAGTTAGAATTAGATAAAGCTGCACA
GGATTTCCGGAAGATTCACTTAGAACGGCAGGAGCTCATTCAGCAGTGGGAGAACACCATTGAG
CAGATGCAGAGGCGGGATCAGGAGATAGACAACTGTGCCCTGGCATTATCACGAATAAAGCAGG
AAGCAAGAGAAAAAGAAGGCGTGGTGAAAGAGAAGATCAAGTTTCTGGAAAATGAGGTTGAGAA
CAACATAGAATACGAGAGAAAAATTTCTGTTGCTGAGCGGAAAGTGTCCAAGTGCAGGATGGAC
TACCAGCGTCACGAAGGCAACAGAAGTCAGCTGAAGGATGAGCTGGATACTTTAAAAACCACTC
TCAACAGAACATCCAGTGACTTACAAGCTCTGAGGAAAAACATTTCCAAAGTAAAGAAGGACAT
CTTTGACGAAACATTAAGATTACAAAAACTTAAACATCACAATGAGGTTGTAAAACATAAATTA
AAGATGATAACTGAGAAGACCCTATCTATTGAAGAGAAAGCTACCAACATGGAAGACATGCTGA
AGGAGGAGGAGAAAGGCCTGAAGGAAGTGGAGGTTCAATTGGGCATAGTAAAAGACGTGTTATT
TAAGAAAGTCCAAGAGTTACAGAACGAGATAGCGAAAGAGAAAGCCCTGGTATCAGAAATTGAA
GGAACCCGTTCCTCCCTGAAACATCTTAACAAACAGTTACACAAACTGGATTTTGAAACCCTGA
AGCAGCAGGAAATTATGTACAGTCAGGATTTTTACATTCAGCAAGTAGAACGCAGAATGTCACG
ATTAAAAGGAGAAATTAATTCAGAGGAAAAGCAAGCCCTTGAAGCAAAAATCCTTGAACTTAAG
AAGACAATGGATGAGAAAAAATCCACACTTTCCCTTTTGGAATCCCAGATCAAGAAGCTCCATA
ATGACCTCTACTTCATTAAGAAATCAAATGGTAAAAACAATGATGAGAAAGAGTCTCTCATGAA
TAAAATAAGTGAACTGAACCTTTTTATTGACAGATCTGAGAAGGAACTGAGCAAAGCCAAAGCT
GTGAAAGAGGATATGATGATCGAGGACAATCTTTTAAAGCTTCAAGTTAAACGTGCTCGAGAAT
TGCTTTACAGCAAGGCAGAGGAAGTCCTTTCTCTAGAGAAAAGGAAACAGCAGCTGGGCAAAGA
CATGGAAGAGAGAGCTGAAGAAATTAAAGTGCACAAAGCCATGCTTACCTCACAGATCAGATGT
GTTGAACAGCAGCGAAAAACTATGAGTTCTGAATTTCATGAGCGGCTAAGTAAAATTGATAAGC
TTAAGAATAGATATGAAATTCTTACTGTTGTCATGCTGCCTCCTGAAGGAGAAGAGGAGAAAAC
ACAGTCCTATTATGTAATAAAGGCTGCTCAAGAAAAAGAAGAACTTCAAAGGGAAGGTGATAGC
TTGGATGCTAAGATCAACAAAGCTGAAAAAGAAATCTATGCTTTGCAAAACACCTTGCAAGTAC
TTAACAGCTGCAACAGCAATTATAAGCAATCTTTCAAAAAAGTGACTCCGTCAAGTGATGAGTA
TGCATTAAAAATTCAACTAGAAGAACAAAAAAGAACTGCAGATGAGAGATACAGATGCAAACAA
AGGCAGATCAGAGAACTTCAAGAAGATATCCAGAGCATGGAAAATACTTTTGAAGTTATAGGAC
ACTTAGCAAATAATGCCAAAGAGAAATTAACAGAGAAACAAACACTTGCATTTCAACTTCGTAA
GGAGACTGAGGAGCAGAAGCCGAAATTGCAGCGAATAACTAAGCAGTGTGGAAGACTCAGAAGA
GAAATCCGCATTTTGAAACAAACAGATAATGAAACTCTAGAAGAACAGGACATTCAGCTCCGTG
AGATCATACAGTTTCACAAGGACATTGACCAAATGTTAGTTAATGCCATGGAAAATGCAGAAAT
TCATGCCATCTTTAAAACATATTTTGAGCAGAACGGGTTAGAACTACCTACAGCAAGAGGCCCG
AGCTCGAGATCTTCTTCCCAGTCTTCCTCCCTTTCATCATTCAGGTCGCTCGAGGATGTAACTC
TCCAGTCTCCCCCCACAGCTAAAGTGATACAGCTCAGATTCCCAGAGCCTCCTCCAGCAACAAA
TGACAGTTCTAGGTCAGCTAGTAGTGGCAGTAATTCCAACATTCCTAAAGAAAAAAAGCTCAGC
AAATGAACATGCTTTTTTTTAAAAAAAAATCTTTTTATACATTTAGAACACAAATGAAAATCTT
ATTAATAGTTAAGTCTCTCTCTTTTTCTGGGGCTTCATTTATTAATGATGCAGGCTTACTAAAA
TACTACCAAAAGTACAGAGCAGACAAAAGTTCTGTACAGTGGCTATAAGAGCTGTCTGAGAAAA
GAACAAAGGGAGTTTTGTGTTTGTTTTTTTCCTACTGTTTTATTTATAGAGAAGGAAAACTGCA
GAACCTTAGCCAAGCCACATGTGACAAAGCAGAGGGAAATAAGCAGGTTTTTTTTTTTTTTACT
AGAACATGTCTACAGTGTTAGATGTTTTATGAAGTAACACATTTATAAGATTCTTTCACTAATA
CACTTCTAAAGATTTATTCTATCTCTCAATAATGAAGTTTTCATTTACTCTAGATCACCAAACT
ACCTTTTAAAATAAAAAATAAGCGAACAACTGTATTCTTCAGATGTTTTTAAGGGGGTTAACAT
GAGGGAGGAGCTTGGGAAAGACCATCTTTTGTTTATTTGTACTGTTTATAATGTGTAACCAAAA
CACAGCATCATTCCCACTCCCTCAGGAAAAAGTTTAGTAAGAAAGACACTGTTTATGTATATGT
ACATATGCATTTGTCTCTATATGTGCACAAATAAAGTGAAACCTAAGCTGTTAAGAATGTTTCT
TCTCTGACCATGAAAGAACTGAACATATTAAATTTACACTGGAGGTAGATATTGCATACTATAT
TTAAAATTTTTTTTCCAGCTAATACTTTATTTCCAGCACTTTGACCTTTTTGGGATAGCATATG
AAATAATACTATAAAGCTAGATTTCAAATACATTACCATTCAGGTATATAAATCAGCATCTCCT
TTAAACCTTTGGGAAAATCGTCATTACAGCAGTGATTGTCTTAGAACTCAGTTACTTCTGGAAA
CGCAGCACTGGTAGGAAATCTGTTTCTACTAATGATCATTTTAAATTTAGAAACATAGTTAAGT
CTAATAAGTAAAAAGGCTAAGAAAACTCTGGGCACTTTTTGGTTCAAACACTGCTTAAATTAAA
TTCACAACATGTTTAGGATCTAAAACTGATTAATCCCATCATTTTGTTTATCAATGTTGTGATT
CTCAGTTATGTTTTAGTTTGTAAGTTACTTAGAACTTAAAACATAAACTTTGTGTCCTACAAAG
GCAGAGGTTTTGTTCCTAGGGAGATTACTTTTCTAAGCCTTTTCTTTTCGTAATCTAGAGATAA
TTAACTATCACAGGTTTATTAAAGGAACATATAAGCAAAATACACTGGCACTAAAACAGGGTTA
ACTGCATAGTAAGTAGTTAGCTTCTACCTATGGAATCACTACTAGATCCTACTCTGGAATGGCC
AGCATCCAAGTTTACATTTAACCACTATACTAACTGCATGTAGTCATGTTAAATGGGAGGACAA
AGGATGAATCCTGTTTTCAGATCTGGAATATCTTAACATCCAGAAGTCACAGTTCTACTCATGG
AAATTAAGACAAAGCTGTCCAGGGAACATGCAAACTATGGACATATTAATGTAAAAGAAACTAA
TGATGACAGAACTGAGAATCAATTTAAATTCTCAATAATTTTTTTCTGTGACGACTCCTCAAAT
ATTCCATGGAACTAGATGCTCAGTGTAGTCTGCTTAACTTAGAATGTCCTACTAGGAAAGATGT
AATTTTCAAAGTCTGATAGCCTTCCCTACAAGGCACTATCCTAAGGGTTAAGTAACATGGTATG
TGTAAGATTACAAGGTGTACTAGGGATTCTCAAAGATCAAGGGGTGTGCATAGAGGTGGTTTTC
ACATAACAACAACAAACCCTAGCTATGTAGGAGTAAGTCTGGAACTAGTGAGACATAGAATACT
CTTAAGAGTTCCTTGGTGCTGGGCTAGCAAAATGGCCCAGTGGATAGAGGTACTTGCTGTCAAG
CCCAATGAGCCAAGATTCATTCCTGGGACCCGTAAGGTGGAAAAAATTCCTTCAAGTTGTCCCC
CAAAGTCCACATACGCTCATCATCCTTACCCCAGCCCCCATGATGATGATGATGATTTCCTTGG
TGTAAAAAACAAATGTTGAAGTGATTATGAAATTTCTGCTGCCATTATTTATTGTTCTTAATCA
AGGTTTCTTTTCTGTATTGTACTGTAAAATAACTGTTATATTTTACAGTAGTTTTCCATCACTG
TAATTTGGTACAAATACTATGTATCAGTATTAAAGCATTTTACTGGTAGAAACACA

hide sequence

RefSeq Acc Id:

XM_006535499 ⟹ XP_006535562

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	33,864,906 - 33,898,473 (-)	NCBI
GRCm38	3	33,810,757 - 33,844,323 (-)	NCBI

Sequence:

show sequence

CTTCCTGTTTGGTAACTAAGGGCGCCTGGCTGTTGCTAGGGCCGCGGAATACAGACGGTTAGGC
TTGGCTGCGAGCTCCAGGGAACGGTTTTGGGTGGCTTGTCTGTGATTCCTTTGAGCCTCGTACG
CCATGTGCAGTGAGTTCTTGTCAGAGCTGCACTGGGAAGATGGGTTCGCCATCCCCGTGGCCAA
TCAGGAGAACAAGATCCTGGAGGATCAGTTGGCAAAGCTCCGAGAGGAAAAATCAAACTTGCAA
GATCAGCTTCATGACTATGAAGAACGAATTAATTCTATGACTTCTCACCTTAAAAATGTGAATC
AGGAATTTTTATTTACACAGTCTCTTTACAAAGCAAGGGAGAGTGAGATCGAGAGCGAAGAACA
TTTTAAGGCCATTGCTGAAAGAGAGCTGGGCCGAGTCAAGAATGAGACCCAACTGCTGGAGAAG
GAGATGGCGATCATCCGGGAGCGCAAGAGCCAAATGGAAAACAATATATTTAAAACTACTCAAA
AGCTGGATGACTTGAAATGTCAGATGAACTGGGACCAGCAAGCCTTGGAGGCCTGGCTGGAAGA
ATCGGCTCACAAAGACAGTGACTCTCTGACCCTTCAGAAGTACTCTCAGCAAGACGATAACAAA
ATCAGGGCCCTGACTCTGCAGTTAGAAAAGCTGACCATGGAGTATAACGAGAAGAGGAAGCTTC
TAGACAGTGAACTGACAGAGACGCTAAGTGCGCAGTTAGAATTAGATAAAGCTGCACAGGATTT
CCGGAAGATTCACTTAGAACGGCAGGAGCTCATTCAGCAGTGGGAGAACACCATTGAGCAGATG
CAGAGGCGGGATCAGGAGATAGACAACTGTGCCCTGGCATTATCACGAATAAAGCAGGAAGCAA
GAGAAAAAGAAGGCGTGGTGAAAGAGAAGATCAAGTTTCTGGAAAATGAGGTTGAGAACAACAT
AGAATACGAGAGAAAAATTTCTGTTGCTGAGCGGAAAGTGTCCAAGTGCAGGATGGACTACCAG
CGTCACGAAGGCAACAGAAGTCAGCTGAAGGATGAGCTGGATACTTTAAAAACCACTCTCAACA
GAACATCCAGTGACTTACAAGCTCTGAGGAAAAACATTTCCAAAGTAAAGAAGGACATCTTTGA
CGAAACATTAAGATTACAAAAACTTAAACATCACAATGAGGTTGTAAAACATAAATTAAAGATG
ATAACTGAGAAGACCCTATCTATTGAAGAGAAAGCTACCAACATGGAAGACATGCTGAAGGAGG
AGGAGAAAGGCCTGAAGGAAGTGGAGGTTCAATTGGGCATAGTAAAAGACGTGTTATTTAAGAA
AGTCCAAGAGTTACAGAACGAGATAGCGAAAGAGAAAGCCCTGGTATCAGAAATTGAAGGAACC
CGTTCCTCCCTGAAACATCTTAACAAACAGTTACACAAACTGGATTTTGAAACCCTGAAGCAGC
AGGAAATTATGTACAGTCAGGATTTTTACATTCAGCAAGTAGAACGCAGAATGTCACGATTAAA
AGGAGAAATTAATTCAGAGGAAAAGCAAGCCCTTGAAGCAAAAATCCTTGAACTTAAGAAGACA
ATGGATGAGAAAAAATCCACACTTTCCCTTTTGGAATCCCAGATCAAGAAGCTCCATGATATGA
TGATCGAGGACAATCTTTTAAAGCTTCAAGTTAAACGTGCTCGAGAATTGCTTTACAGCAAGGC
AGAGGAAGTCCTTTCTCTAGAGAAAAGGAAACAGCAGCTGGGCAAAGACATGGAAGAGAGAGCT
GAAGAAATTAAAGTGCACAAAGCCATGCTTACCTCACAGATCAGATGTGTTGAACAGCAGCGAA
AAACTATGAGTTCTGAATTTCATGAGCGGCTAAGTAAAATTGATAAGCTTAAGAATAGATATGA
AATTCTTACTGTTGTCATGCTGCCTCCTGAAGGAGAAGAGGAGAAAACACAGTCCTATTATGTA
ATAAAGGCTGCTCAAGAAAAAGAAGAACTTCAAAGGGAAGGTGATAGCTTGGATGCTAAGATCA
ACAAAGCTGAAAAAGAAATCTATGCTTTGCAAAACACCTTGCAAGTACTTAACAGCTGCAACAG
CAATTATAAGCAATCTTTCAAAAAAGTGACTCCGTCAAGTGATGAGTATGCATTAAAAATTCAA
CTAGAAGAACAAAAAAGAACTGCAGATGAGAGATACAGATGCAAACAAAGGCAGATCAGAGAAC
TTCAAGAAGATATCCAGAGCATGGAAAATACTTTTGAAGTTATAGGACACTTAGCAAATAATGC
CAAAGAGAAATTAACAGAGAAACAAACACTTGCATTTCAACTTCGTAAGGAGACTGAGGAGCAG
AAGCCGAAATTGCAGCGAATAACTAAGCAGTGTGGAAGACTCAGAAGAGAAATCCGCATTTTGA
AACAAACAGATAATGAAACTCTAGAAGAACAGGACATTCAGCTCCGTGAGATCATACAGTTTCA
CAAGGACATTGACCAAATGTTAGTTAATGCCATGGAAAATGCAGAAATTCATGCCATCTTTAAA
ACATATTTTGAGCAGAACGGGTTAGAACTACCTACAGCAAGAGGCCCGAGCTCGAGATCTTCTT
CCCAGTCTTCCTCCCTTTCATCATTCAGGTCGCTCGAGGATGTAACTCTCCAGTCTCCCCCCAC
AGCTAAAGTGATACAGCTCAGATTCCCAGAGCCTCCTCCAGCAACAAATGACAGTTCTAGGTCA
GCTAGTAGTGGCAGTAATTCCAACATTCCTAAAGAAAAAAAGCTCAGCAAATGAACATGCTTTT
TTTTAAAAAAAAATCTTTTTATACATTTAGAACACAAATGAAAATCTTATTAATAGTTAAGTCT
CTCTCTTTTTCTGGGGCTTCATTTATTAATGATGCAGGCTTACTAAAATACTACCAAAAGTACA
GAGCAGACAAAAGTTCTGTACAGTGGCTATAAGAGCTGTCTGAGAAAAGAACAAAGGGAGTTTT
GTGTTTGTTTTTTTCCTACTGTTTTATTTATAGAGAAGGAAAACTGCAGAACCTTAGCCAAGCC
ACATGTGACAAAGCAGAGGGAAATAAGCAGGTTTTTTTTTTTTTTACTAGAACATGTCTACAGT
GTTAGATGTTTTATGAAGTAACACATTTATAAGATTCTTTCACTAATACACTTCTAAAGATTTA
TTCTATCTCTCAATAATGAAGTTTTCATTTACTCTAGATCACCAAACTACCTTTTAAAATAAAA
AATAAGCGAACAACTGTATTCTTCAGATGTTTTTAAGGGGGTTAACATGAGGGAGGAGCTTGGG
AAAGACCATCTTTTGTTTATTTGTACTGTTTATAATGTGTAACCAAAACACAGCATCATTCCCA
CTCCCTCAGGAAAAAGTTTAGTAAGAAAGACACTGTTTATGTATATGTACATATGCATTTGTCT
CTATATGTGCACAAATAAAGTGAAACCTAAGCTGTTAAGAATGTTTCTTCTCTGACCATGAAAG
AACTGAACATATTAAATTTACACTGGAGGTAGATATTGCATACTATATTTAAAATTTTTTTTCC
AGCTAATACTTTATTTCCAGCACTTTGACCTTTTTGGGATAGCATATGAAATAATACTATAAAG
CTAGATTTCAAATACATTACCATTCAGGTATATAAATCAGCATCTCCTTTAAACCTTTGGGAAA
ATCGTCATTACAGCAGTGATTGTCTTAGAACTCAGTTACTTCTGGAAACGCAGCACTGGTAGGA
AATCTGTTTCTACTAATGATCATTTTAAATTTAGAAACATAGTTAAGTCTAATAAGTAAAAAGG
CTAAGAAAACTCTGGGCACTTTTTGGTTCAAACACTGCTTAAATTAAATTCACAACATGTTTAG
GATCTAAAACTGATTAATCCCATCATTTTGTTTATCAATGTTGTGATTCTCAGTTATGTTTTAG
TTTGTAAGTTACTTAGAACTTAAAACATAAACTTTGTGTCCTACAAAGGCAGAGGTTTTGTTCC
TAGGGAGATTACTTTTCTAAGCCTTTTCTTTTCGTAATCTAGAGATAATTAACTATCACAGGTT
TATTAAAGGAACATATAAGCAAAATACACTGGCACTAAAACAGGGTTAACTGCATAGTAAGTAG
TTAGCTTCTACCTATGGAATCACTACTAGATCCTACTCTGGAATGGCCAGCATCCAAGTTTACA
TTTAACCACTATACTAACTGCATGTAGTCATGTTAAATGGGAGGACAAAGGATGAATCCTGTTT
TCAGATCTGGAATATCTTAACATCCAGAAGTCACAGTTCTACTCATGGAAATTAAGACAAAGCT
GTCCAGGGAACATGCAAACTATGGACATATTAATGTAAAAGAAACTAATGATGACAGAACTGAG
AATCAATTTAAATTCTCAATAATTTTTTTCTGTGACGACTCCTCAAATATTCCATGGAACTAGA
TGCTCAGTGTAGTCTGCTTAACTTAGAATGTCCTACTAGGAAAGATGTAATTTTCAAAGTCTGA
TAGCCTTCCCTACAAGGCACTATCCTAAGGGTTAAGTAACATGGTATGTGTAAGATTACAAGGT
GTACTAGGGATTCTCAAAGATCAAGGGGTGTGCATAGAGGTGGTTTTCACATAACAACAACAAA
CCCTAGCTATGTAGGAGTAAGTCTGGAACTAGTGAGACATAGAATACTCTTAAGAGTTCCTTGG
TGCTGGGCTAGCAAAATGGCCCAGTGGATAGAGGTACTTGCTGTCAAGCCCAATGAGCCAAGAT
TCATTCCTGGGACCCGTAAGGTGGAAAAAATTCCTTCAAGTTGTCCCCCAAAGTCCACATACGC
TCATCATCCTTACCCCAGCCCCCATGATGATGATGATGATTTCCTTGGTGTAAAAAACAAATGT
TGAAGTGATTATGAAATTTCTGCTGCCATTATTTATTGTTCTTAATCAAGGTTTCTTTTCTGTA
TTGTACTGTAAAATAACTGTTATATTTTACAGTAGTTTTCCATCACTGTAATTTGGTACAAATA
CTATGTATCAGTATTAAAGCATTTTACTGGTAGAAACACA

hide sequence

RefSeq Acc Id:

XM_006535500 ⟹ XP_006535563

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	33,871,013 - 33,898,473 (-)	NCBI
GRCm38	3	33,816,872 - 33,844,325 (-)	NCBI

Sequence:

show sequence

CTTCCTGTTTGGTAACTAAGGGCGCCTGGCTGTTGCTAGGGCCGCGGAATACAGACGGTTAGGC
TTGGCTGCGAGCTCCAGGGAACGGTTTTGGGTGGCTTGTCTGTGATTCCTTTGAGCCTCGTACG
CCATGTGCAGTGAGTTCTTGTCAGAGCTGCACTGGGAAGATGGGTTCGCCATCCCCGTGGCCAA
TCAGGAGAACAAGATCCTGGAGGATCAGTTGGCAAAGCTCCGAGAGGAAAAATCAAACTTGCAA
GATCAGCTTCATGACTATGAAGAACGAATTAATTCTATGACTTCTCACCTTAAAAATGTGAATC
AGGAATTTTTATTTACACAGTCTCTTTACAAAGCAAGGGAGAGTGAGATCGAGAGCGAAGAACA
TTTTAAGGCCATTGCTGAAAGAGAGCTGGGCCGAGTCAAGAATGAGACCCAACTGCTGGAGAAG
GAGATGGCGATCATCCGGGAGCGCAAGAGCCAAATGGAAAACAATATATTTAAAACTACTCAAA
AGCTGGATGACTTGAAATGTCAGATGAACTGGGACCAGCAAGCCTTGGAGGCCTGGCTGGAAGA
ATCGGCTCACAAAGACAGTGACTCTCTGACCCTTCAGAAGTACTCTCAGCAAGACGATAACAAA
ATCAGGGCCCTGACTCTGCAGTTAGAAAAGCTGACCATGGAGTATAACGAGAAGAGGAAGCTTC
TAGACAGTGAACTGACAGAGACGCTAAGTGCGCAGTTAGAATTAGATAAAGCTGCACAGGATTT
CCGGAAGATTCACTTAGAACGGCAGGAGCTCATTCAGCAGTGGGAGAACACCATTGAGCAGATG
CAGAGGCGGGATCAGGAGATAGACAACTGTGCCCTGGCATTATCACGAATAAAGCAGGAAGCAA
GAGAAAAAGAAGGCGTGGTGAAAGAGAAGATCAAGTTTCTGGAAAATGAGGTTGAGAACAACAT
AGAATACGAGAGAAAAATTTCTGTTGCTGAGCGGAAAGTGTCCAAGTGCAGGATGGACTACCAG
CGTCACGAAGGCAACAGAAGTCAGCTGAAGGATGAGCTGGATACTTTAAAAACCACTCTCAACA
GAACATCCAGTGACTTACAAGCTCTGAGGAAAAACATTTCCAAAGTAAAGAAGGACATCTTTGA
CGAAACATTAAGATTACAAAAACTTAAACATCACAATGAGGTTGTAAAACATAAATTAAAGATG
ATAACTGAGAAGACCCTATCTATTGAAGAGAAAGCTACCAACATGGAAGACATGCTGAAGGAGG
AGGAGAAAGGCCTGAAGGAAGTGGAGGTTCAATTGGGCATAGTAAAAGACGTGTTATTTAAGAA
AGTCCAAGAGTTACAGAACGAGATAGCGAAAGAGAAAGCCCTGGTATCAGAAATTGAAGGAACC
CGTTCCTCCCTGAAACATCTTAACAAACAGTTACACAAACTGGATTTTGAAACCCTGAAGCAGC
AGGAAATTATGTACAGTCAGGATTTTTACATTCAGCAAGTAGAACGCAGAATGTCACGATTAAA
AGGAGAAATTAATTCAGAGGAAAAGCAAGCCCTTGAAGCAAAAATCCTTGAACTTAAGAAGACA
ATGGATGAGAAAAAATCCACACTTTCCCTTTTGGAATCCCAGATCAAGAAGCTCCATAATGACC
TCTACTTCATTAAGAAATCAAATGGTAAAAACAATGATGAGAAAGAGTCTCTCATGAATAAAAT
AAGTGAACTGAACCTTTTTATTGACAGATCTGAGAAGGAACTGAGCAAAGCCAAAGCTGTGAAA
GAGGATATGATGATCGAGGACAATCTTTTAAAGCTTCAAGTTAAACGTGCTCGAGAATTGCTTT
ACAGCAAGGCAGAGGAAGTCCTTTCTCTAGAGAAAAGGAAACAGCAGCTGGGCAAAGACATGGA
AGAGAGAGCTGAAGAAATTAAAGTGCACAAAGCCATGCTTACCTCACAGATCAGATGTGTTGAA
CAGCAGCGAAAAACTATGAGATTAAAACAAGGGCTTCATGTATGCTGGACAAGATGAACTACAT
GCCTCAGCCTTCTTCTGAGTTCTGAATTTCATGAGCGGCTAAGTAAAATTGATAAGCTTAAGAA
TAGATATGAAATTCTTACTGTTGTCATGCTGCCTCCTGAAGGA

hide sequence

RefSeq Acc Id:

XM_011249686 ⟹ XP_011247988

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	33,864,906 - 33,886,868 (-)	NCBI
GRCm38	3	33,810,757 - 33,832,617 (-)	NCBI

Sequence:

show sequence

GCATTATCACGAATAAAGCAGGAAGCAAGAGAAAAAGAAGGCGTGGTGAAAGAGAAGATCAAGT
TTCTGGAAAATGAGGTTGAGAACAACATAGAATACGAGAGAAAAATTTCTGTTGCTGAGCGGAA
AGTGTCCAAGTGCAGGATGGACTACCAGCGTCACGAAGGCAACAGAAGTCAGCTGAAGGATGAG
AACATCCAGTGACTTACAAGCTCTGAGGAAAAACATTTCCAAAGTAAAGAAGGACATCTTTGAC
GAAACATTAAGATTACAAAAACTTAAACATCACAATGAGGTTGTAAAACATAAATTAAAGATGA
TAACTGAGAAGACCCTATCTATTGAAGAGAAAGCTACCAACATGGAAGACATGCTGAAGGAGGA
GGAGAAAGGCCTGAAGGAAGTGGAGGTTCAATTGGGCATAGTAAAAGACGTGTTATTTAAGAAA
GTCCAAGAGTTACAGAACGAGATAGCGAAAGAGAAAGCCCTGGTATCAGAAATTGAAGGAACCC
GTTCCTCCCTGAAACATCTTAACAAACAGTTACACAAACTGGATTTTGAAACCCTGAAGCAGCA
GGAAATTATGTACAGTCAGGATTTTTACATTCAGCAAGTAGAACGCAGAATGTCACGATTAAAA
GGAGAAATTAATTCAGAGGAAAAGCAAGCCCTTGAAGCAAAAATCCTTGAACTTAAGAAGACAA
TGGATGAGAAAAAATCCACACTTTCCCTTTTGGAATCCCAGATCAAGAAGCTCCATAATGACCT
CTACTTCATTAAGAAATCAAATGGTAAAAACAATGATGAGAAAGAGTCTCTCATGAATAAAATA
AGTGAACTGAACCTTTTTATTGACAGATCTGAGAAGGAACTGAGCAAAGCCAAAGCTGTGAAAG
AGGATATGATGATCGAGGACAATCTTTTAAAGCTTCAAGTTAAACGTGCTCGAGAATTGCTTTA
CAGCAAGGCAGAGGAAGTCCTTTCTCTAGAGAAAAGGAAACAGCAGCTGGGCAAAGACATGGAA
GAGAGAGCTGAAGAAATTAAAGTGCACAAAGCCATGCTTACCTCACAGATCAGATGTGTTGAAC
AGCAGCGAAAAACTATGAGTTCTGAATTTCATGAGCGGCTAAGTAAAATTGATAAGCTTAAGAA
TAGATATGAAATTCTTACTGTTGTCATGCTGCCTCCTGAAGGAGAAGAGGAGAAAACACAGTCC
TATTATGTAATAAAGGCTGCTCAAGAAAAAGAAGAACTTCAAAGGGAAGGTGATAGCTTGGATG
CTAAGATCAACAAAGCTGAAAAAGAAATCTATGCTTTGCAAAACACCTTGCAAGTACTTAACAG
CTGCAACAGCAATTATAAGCAATCTTTCAAAAAAGTGACTCCGTCAAGTGATGAGTATGCATTA
AAAATTCAACTAGAAGAACAAAAAAGAACTGCAGATGAGAGATACAGATGCAAACAAAGGCAGA
TCAGAGAACTTCAAGAAGATATCCAGAGCATGGAAAATACTTTTGAAGTTATAGGACACTTAGC
AAATAATGCCAAAGAGAAATTAACAGAGAAACAAACACTTGCATTTCAACTTCGTAAGGAGACT
GAGGAGCAGAAGCCGAAATTGCAGCGAATAACTAAGCAGTGTGGAAGACTCAGAAGAGAAATCC
GCATTTTGAAACAAACAGATAATGAAACTCTAGAAGAACAGGACATTCAGCTCCGTGAGATCAT
ACAGTTTCACAAGGACATTGACCAAATGTTAGTTAATGCCATGGAAAATGCAGAAATTCATGCC
ATCTTTAAAACATATTTTGAGCAGAACGGGTTAGAACTACCTACAGCAAGAGGCCCGAGCTCGA
GATCTTCTTCCCAGTCTTCCTCCCTTTCATCATTCAGGTCGCTCGAGGATGTAACTCTCCAGTC
TCCCCCCACAGCTAAAGTGATACAGCTCAGATTCCCAGAGCCTCCTCCAGCAACAAATGACAGT
TCTAGGTCAGCTAGTAGTGGCAGTAATTCCAACATTCCTAAAGAAAAAAAGCTCAGCAAATGAA
CATGCTTTTTTTTAAAAAAAAATCTTTTTATACATTTAGAACACAAATGAAAATCTTATTAATA
GTTAAGTCTCTCTCTTTTTCTGGGGCTTCATTTATTAATGATGCAGGCTTACTAAAATACTACC
AAAAGTACAGAGCAGACAAAAGTTCTGTACAGTGGCTATAAGAGCTGTCTGAGAAAAGAACAAA
GGGAGTTTTGTGTTTGTTTTTTTCCTACTGTTTTATTTATAGAGAAGGAAAACTGCAGAACCTT
AGCCAAGCCACATGTGACAAAGCAGAGGGAAATAAGCAGGTTTTTTTTTTTTTTACTAGAACAT
GTCTACAGTGTTAGATGTTTTATGAAGTAACACATTTATAAGATTCTTTCACTAATACACTTCT
AAAGATTTATTCTATCTCTCAATAATGAAGTTTTCATTTACTCTAGATCACCAAACTACCTTTT
AAAATAAAAAATAAGCGAACAACTGTATTCTTCAGATGTTTTTAAGGGGGTTAACATGAGGGAG
GAGCTTGGGAAAGACCATCTTTTGTTTATTTGTACTGTTTATAATGTGTAACCAAAACACAGCA
TCATTCCCACTCCCTCAGGAAAAAGTTTAGTAAGAAAGACACTGTTTATGTATATGTACATATG
CATTTGTCTCTATATGTGCACAAATAAAGTGAAACCTAAGCTGTTAAGAATGTTTCTTCTCTGA
CCATGAAAGAACTGAACATATTAAATTTACACTGGAGGTAGATATTGCATACTATATTTAAAAT
TTTTTTTCCAGCTAATACTTTATTTCCAGCACTTTGACCTTTTTGGGATAGCATATGAAATAAT
ACTATAAAGCTAGATTTCAAATACATTACCATTCAGGTATATAAATCAGCATCTCCTTTAAACC
TTTGGGAAAATCGTCATTACAGCAGTGATTGTCTTAGAACTCAGTTACTTCTGGAAACGCAGCA
CTGGTAGGAAATCTGTTTCTACTAATGATCATTTTAAATTTAGAAACATAGTTAAGTCTAATAA
GTAAAAAGGCTAAGAAAACTCTGGGCACTTTTTGGTTCAAACACTGCTTAAATTAAATTCACAA
CATGTTTAGGATCTAAAACTGATTAATCCCATCATTTTGTTTATCAATGTTGTGATTCTCAGTT
ATGTTTTAGTTTGTAAGTTACTTAGAACTTAAAACATAAACTTTGTGTCCTACAAAGGCAGAGG
TTTTGTTCCTAGGGAGATTACTTTTCTAAGCCTTTTCTTTTCGTAATCTAGAGATAATTAACTA
TCACAGGTTTATTAAAGGAACATATAAGCAAAATACACTGGCACTAAAACAGGGTTAACTGCAT
AGTAAGTAGTTAGCTTCTACCTATGGAATCACTACTAGATCCTACTCTGGAATGGCCAGCATCC
AAGTTTACATTTAACCACTATACTAACTGCATGTAGTCATGTTAAATGGGAGGACAAAGGATGA
ATCCTGTTTTCAGATCTGGAATATCTTAACATCCAGAAGTCACAGTTCTACTCATGGAAATTAA
GACAAAGCTGTCCAGGGAACATGCAAACTATGGACATATTAATGTAAAAGAAACTAATGATGAC
AGAACTGAGAATCAATTTAAATTCTCAATAATTTTTTTCTGTGACGACTCCTCAAATATTCCAT
GGAACTAGATGCTCAGTGTAGTCTGCTTAACTTAGAATGTCCTACTAGGAAAGATGTAATTTTC
AAAGTCTGATAGCCTTCCCTACAAGGCACTATCCTAAGGGTTAAGTAACATGGTATGTGTAAGA
TTACAAGGTGTACTAGGGATTCTCAAAGATCAAGGGGTGTGCATAGAGGTGGTTTTCACATAAC
AACAACAAACCCTAGCTATGTAGGAGTAAGTCTGGAACTAGTGAGACATAGAATACTCTTAAGA
GTTCCTTGGTGCTGGGCTAGCAAAATGGCCCAGTGGATAGAGGTACTTGCTGTCAAGCCCAATG
AGCCAAGATTCATTCCTGGGACCCGTAAGGTGGAAAAAATTCCTTCAAGTTGTCCCCCAAAGTC
CACATACGCTCATCATCCTTACCCCAGCCCCCATGATGATGATGATGATTTCCTTGGTGTAAAA
AACAAATGTTGAAGTGATTATGAAATTTCTGCTGCCATTATTTATTGTTCTTAATCAAGGTTTC
TTTTCTGTATTGTACTGTAAAATAACTGTTATATTTTACAGTAGTTTTCCATCACTGTAATTTG
GTACAAATACTATGTATCAGTATTAAAGCATTTTACTGGTAGAAACACA

hide sequence

RefSeq Acc Id:

XR_001783715

RefSeq Status:

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	33,864,906 - 33,898,473 (-)	NCBI
GRCm38	3	33,810,757 - 33,844,324 (-)	NCBI

Sequence:

show sequence

CTTCCTGTTTGGTAACTAAGGGCGCCTGGCTGTTGCTAGGGCCGCGGAATACAGACGGTTAGGC
TTGGCTGCGAGCTCCAGGGAACGGTTTTGGGTGGCTTGTCTGTGATTCCTTTGAGCCTCGTACG
CCATGTGCAGTGAGTTCTTGTCAGAGCTGCACTGGGAAGATGGGTTCGCCATCCCCGTGGCCAA
TCAGGAGAACAAGATCCTGGAGGATCAGTTGGCAAAGCTCCGAGAGGAAAAATCAAACTTGCAA
GATCAGCTTCATGACTATGAAGAACGAATTAATTCTATGACTTCTCACCTTAAAAATGTGAATC
AGGAATTTTTATTTACACAGTCTCTTTACAAAGCAAGGGAGAGTGAGATCGAGAGCGAAGAACA
TTTTAAGGCCATTGCTGAAAGAGAGCTGGGCCGAGTCAAGAATGAGACCCAACTGCTGGAGAAG
GAGATGGCGATCATCCGGGAGCGCAAGAGCCAAATGGAAAACAATATATTTAAAACTACTCAAA
AGCTGGATGACTTGAAATGTCAGATGAACTGGGACCAGCAAGCCTTGGAGGCCTGGCTGGAAGA
ATCGGCTCACAAAGACAGTGACTCTCTGACCCTTCAGAAGTACTCTCAGCAAGACGATAACAAA
ATCAGGGCCCTGACTCTGCAGTTAGAAAAGCTGACCATGGAGTATAACGAGAAGAGGAAGCTTC
TAGACAGTGAACTGACAGAGACGCTAAGTGCGCAGTTAGAATTAGATAAAGCTGCACAGGATTT
CCGGAAGATTCACTTAGAACGGCAGGAGCTCATTCAGCAGTGGGAGAACACCATTGAGCAGATG
CAGAGGCGGGATCAGGAGATAGACAACTGTGCCCTGGCATTATCACGAATAAAGCAGGAAGCAA
GAGAAAAAGAAGGCGTGGTGAAAGAGAAGATCAAGTTTCTGGAAAATGAGGTTGAGAACAACAT
AGAATACGAGAGAAAAATTTCTGTTGCTGAGCGGAAAGTGTCCAAGTGCAGGATGGACTACCAG
CGTCACGAAGGCAACAGAAGTCAGCTGAAGGATGAGCTGGATACTTTAAAAACCACTCTCAACA
GAACATCCAGTGACTTACAAGCTCTGAGGAAAAACATTTCCAAAGTAAAGAAGGACATCTTTGA
CGAAACATTAAGATTACAAAAACTTAAACATCACAATGAGGTTGTAAAACATAAATTAAAGATG
ATAACTGAGAAGACCCTATCTATTGAAGAGAAAGCTACCAACATGGAAGACATGCTGAAGGAGG
AGGAGAAAGGCCTGAAGGAAGTGGAGGTTCAATTGGGCATAGTAAAAGACGTGTTATTTAAGAA
AGTCCAAGAGTTACAGAACGAGATAGCGAAAGAGAAAGCCCTGGTATCAGAAATTGAAGGAACC
CGTTCCTCCCTGAAACATCTTAACAAACAGTTACACAAACTGGATTTTGAAACCCTGAAGCAGC
AGGAAATTATGTACAGTCAGGATTTTTACATTCAGCAAGTAGAACGCAGAATGTCACGATTAAA
AGGAGAAATTAATTCAGAGGAAAAGCAAGCCCTTGAAGCAAAAATCCTTGAACTTAAGAAGACA
ATGGATGAGAAAAAATCCACACTTTCCCTTTTGGAATCCCAGATCAAGAAGCTCCATAATGACC
TCTACTTCATTAAGAAATCAAATGGTAAAAACAATGATGAGAAAGAGTCTCTCATGAATAAAAT
AAGTGAACTGAACCTTTTTATTGACAGATCTGAGAAGGAACTGAGCAAAGCCAAAGCTGTGAAA
GAGGTGTGATGAATCTGGATACATAGATATGATGATCGAGGACAATCTTTTAAAGCTTCAAGTT
AAACGTGCTCGAGAATTGCTTTACAGCAAGGCAGAGGAAGTCCTTTCTCTAGAGAAAAGGAAAC
AGCAGCTGGGCAAAGACATGGAAGAGAGAGCTGAAGAAATTAAAGTGCACAAAGCCATGCTTAC
CTCACAGATCAGATGTGTTGAACAGCAGCGAAAAACTATGAGTTCTGAATTTCATGAGCGGCTA
AGTAAAATTGATAAGCTTAAGAATAGATATGAAATTCTTACTGTTGTCATGCTGCCTCCTGAAG
GAGAAGAGGAGAAAACACAGTCCTATTATGTAATAAAGGCTGCTCAAGAAAAAGAAGAACTTCA
AAGGGAAGGTGATAGCTTGGATGCTAAGATCAACAAAGCTGAAAAAGAAATCTATGCTTTGCAA
AACACCTTGCAAGTACTTAACAGCTGCAACAGCAATTATAAGCAATCTTTCAAAAAAGTGACTC
CGTCAAGTGATGAGTATGCATTAAAAATTCAACTAGAAGAACAAAAAAGAACTGCAGATGAGAG
ATACAGATGCAAACAAAGGCAGATCAGAGAACTTCAAGAAGATATCCAGAGCATGGAAAATACT
TTTGAAGTTATAGGACACTTAGCAAATAATGCCAAAGAGAAATTAACAGAGAAACAAACACTTG
CATTTCAACTTCGTAAGGAGACTGAGGAGCAGAAGCCGAAATTGCAGCGAATAACTAAGCAGTG
TGGAAGACTCAGAAGAGAAATCCGCATTTTGAAACAAACAGATAATGAAACTCTAGAAGAACAG
GACATTCAGCTCCGTGAGATCATACAGTTTCACAAGGACATTGACCAAATGTTAGTTAATGCCA
TGGAAAATGCAGAAATTCATGCCATCTTTAAAACATATTTTGAGCAGAACGGGTTAGAACTACC
TACAGCAAGAGGCCCGAGCTCGAGATCTTCTTCCCAGTCTTCCTCCCTTTCATCATTCAGGTCG
CTCGAGGATGTAACTCTCCAGTCTCCCCCCACAGCTAAAGTGATACAGCTCAGATTCCCAGAGC
CTCCTCCAGCAACAAATGACAGTTCTAGGTCAGCTAGTAGTGGCAGTAATTCCAACATTCCTAA
AGAAAAAAAGCTCAGCAAATGAACATGCTTTTTTTTAAAAAAAAATCTTTTTATACATTTAGAA
CACAAATGAAAATCTTATTAATAGTTAAGTCTCTCTCTTTTTCTGGGGCTTCATTTATTAATGA
TGCAGGCTTACTAAAATACTACCAAAAGTACAGAGCAGACAAAAGTTCTGTACAGTGGCTATAA
GAGCTGTCTGAGAAAAGAACAAAGGGAGTTTTGTGTTTGTTTTTTTCCTACTGTTTTATTTATA
GAGAAGGAAAACTGCAGAACCTTAGCCAAGCCACATGTGACAAAGCAGAGGGAAATAAGCAGGT
TTTTTTTTTTTTTACTAGAACATGTCTACAGTGTTAGATGTTTTATGAAGTAACACATTTATAA
GATTCTTTCACTAATACACTTCTAAAGATTTATTCTATCTCTCAATAATGAAGTTTTCATTTAC
TCTAGATCACCAAACTACCTTTTAAAATAAAAAATAAGCGAACAACTGTATTCTTCAGATGTTT
TTAAGGGGGTTAACATGAGGGAGGAGCTTGGGAAAGACCATCTTTTGTTTATTTGTACTGTTTA
TAATGTGTAACCAAAACACAGCATCATTCCCACTCCCTCAGGAAAAAGTTTAGTAAGAAAGACA
CTGTTTATGTATATGTACATATGCATTTGTCTCTATATGTGCACAAATAAAGTGAAACCTAAGC
TGTTAAGAATGTTTCTTCTCTGACCATGAAAGAACTGAACATATTAAATTTACACTGGAGGTAG
ATATTGCATACTATATTTAAAATTTTTTTTCCAGCTAATACTTTATTTCCAGCACTTTGACCTT
TTTGGGATAGCATATGAAATAATACTATAAAGCTAGATTTCAAATACATTACCATTCAGGTATA
TAAATCAGCATCTCCTTTAAACCTTTGGGAAAATCGTCATTACAGCAGTGATTGTCTTAGAACT
CAGTTACTTCTGGAAACGCAGCACTGGTAGGAAATCTGTTTCTACTAATGATCATTTTAAATTT
AGAAACATAGTTAAGTCTAATAAGTAAAAAGGCTAAGAAAACTCTGGGCACTTTTTGGTTCAAA
CACTGCTTAAATTAAATTCACAACATGTTTAGGATCTAAAACTGATTAATCCCATCATTTTGTT
TATCAATGTTGTGATTCTCAGTTATGTTTTAGTTTGTAAGTTACTTAGAACTTAAAACATAAAC
TTTGTGTCCTACAAAGGCAGAGGTTTTGTTCCTAGGGAGATTACTTTTCTAAGCCTTTTCTTTT
CGTAATCTAGAGATAATTAACTATCACAGGTTTATTAAAGGAACATATAAGCAAAATACACTGG
CACTAAAACAGGGTTAACTGCATAGTAAGTAGTTAGCTTCTACCTATGGAATCACTACTAGATC
CTACTCTGGAATGGCCAGCATCCAAGTTTACATTTAACCACTATACTAACTGCATGTAGTCATG
TTAAATGGGAGGACAAAGGATGAATCCTGTTTTCAGATCTGGAATATCTTAACATCCAGAAGTC
ACAGTTCTACTCATGGAAATTAAGACAAAGCTGTCCAGGGAACATGCAAACTATGGACATATTA
ATGTAAAAGAAACTAATGATGACAGAACTGAGAATCAATTTAAATTCTCAATAATTTTTTTCTG
TGACGACTCCTCAAATATTCCATGGAACTAGATGCTCAGTGTAGTCTGCTTAACTTAGAATGTC
CTACTAGGAAAGATGTAATTTTCAAAGTCTGATAGCCTTCCCTACAAGGCACTATCCTAAGGGT
TAAGTAACATGGTATGTGTAAGATTACAAGGTGTACTAGGGATTCTCAAAGATCAAGGGGTGTG
CATAGAGGTGGTTTTCACATAACAACAACAAACCCTAGCTATGTAGGAGTAAGTCTGGAACTAG
TGAGACATAGAATACTCTTAAGAGTTCCTTGGTGCTGGGCTAGCAAAATGGCCCAGTGGATAGA
GGTACTTGCTGTCAAGCCCAATGAGCCAAGATTCATTCCTGGGACCCGTAAGGTGGAAAAAATT
CCTTCAAGTTGTCCCCCAAAGTCCACATACGCTCATCATCCTTACCCCAGCCCCCATGATGATG
ATGATGATTTCCTTGGTGTAAAAAACAAATGTTGAAGTGATTATGAAATTTCTGCTGCCATTAT
TTATTGTTCTTAATCAAGGTTTCTTTTCTGTATTGTACTGTAAAATAACTGTTATATTTTACAG
TAGTTTTCCATCACTGTAATTTGGTACAAATACTATGTATCAGTATTAAAGCATTTTACTGGTA
GAAACACA

hide sequence

RefSeq Acc Id:

XR_003954357

RefSeq Status:

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	33,864,906 - 33,898,473 (-)	NCBI
GRCm38	3	33,810,757 - 33,844,325 (-)	NCBI

Sequence:

show sequence

CTTCCTGTTTGGTAACTAAGGGCGCCTGGCTGTTGCTAGGGCCGCGGAATACAGACGGTTAGGC
TTGGCTGCGAGCTCCAGGGAACGGTTTTGGGTGGCTTGTCTGTGATTCCTTTGAGCCTCGTACG
CCATGTGCAGTGAGTTCTTGTCAGAGCTGCACTGGGAAGATGGGTTCGCCATCCCCGTGGCCAA
TCAGGAGAACAAGATCCTGGAGGATCAGTTGGCAAAGCTCCGAGAGGAAAAATCAAACTTGCAA
GATCAGCTTCATGACTATGAAGAACGAATTAATTCTATGACTTCTCACCTTAAAAATGTGAATC
AGGAATTTTTATTTACACAGTCTCTTTACAAAGCAAGGGAGAGTGAGATCGAGAGCGAAGAACA
TTTTAAGGCCATTGCTGAAAGAGAGCTGGGCCGAGTCAAGAATGAGACCCAACTGCTGGAGAAG
GAGATGGCGATCATCCGGGAGCGCAAGAGCCAAATGGAAAACAATATATTTAAAACTACTCAAA
AGCTGGATGACTTGAAATGTCAGATGAACTGGGACCAGCAAGCCTTGGAGGCCTGGCTGGAAGA
ATCGGCTCACAAAGACAGTGACTCTCTGACCCTTCAGAAGTACTCTCAGCAAGACGATAACAAA
ATCAGGGCCCTGACTCTGCAGTTAGAAAAGCTGACCATGGAGTATAACGAGAAGAGGAAGCTTC
TAGACAGTGAACTGACAGAGACGCTAAGTGCGCAGTTAGAATTAGATAAAGCTGCACAGGATTT
CCGGAAGATTCACTTAGAACGGCAGGAGCTCATTCAGCAGTGGGAGAACACCATTGAGCAGATG
CAGAGGCGGGATCAGGAGATAGACAACTGTGCCCTGGCATTATCACGAATAAAGCAGGAAGCAA
GAGAAAAAGAAGGCGTGGTGAAAGAGAAGATCAAGTTTCTGGAAAATGAGGTTGAGAACAACAT
AGAATACGAGAGAAAAATTTCTGTTGCTGAGCGGAAAGTGTCCAAGTGCAGGATGGACTACCAG
CGTCACGAAGGCAACAGAAGTCAGCTGAAGGATGAGCTGGATACTTTAAAAACCACTCTCAACA
GAACATCCAGTGACTTACAAGCTCTGAGGAAAAACATTTCCAAAGTAAAGAAGGACATCTTTGA
CGAAACATTAAGATTACAAAAACTTAAACATCACAATGAGGTTGTAAAACATAAATTAAAGATG
ATAACTGAGAAGACCCTATCTATTGAAGAGAAAGCTACCAACATGGAAGACATGCTGAAGGAGG
AGGAGAAAGGCCTGAAGGAAGTGGAGGTTCAATTGGGCATAGTAAAAGACGTGTTATTTAAGAA
AGTCCAAGAGTTACAGAACGAGATAGCGAAAGAGAAAGCCCTGGTATCAGAAATTGAAGGAACC
CGTTCCTCCCTGAAACATCTTAACAAACAGTTACACAAACTGGATTTTGAAACCCTGAAGCAGC
AGGAAATTATGTACAGTCAGGATTTTTACATTCAGCAAGTAGAACGCAGAATGTCACGATTAAA
AGGAGAAATTAATTCAGAGGAAAAGCAAGCCCTTGAAGCAAAAATCCTTGAACTTAAGAAGACA
ATGGATGAGAAAAAATCCACACTTTCCCTTTTGGAATCCCAGATCAAGAAGCTCCATAATGACC
TCTACTTCATTAAGAAATCAAATGGTAAAAACAATGATGAGAAAGAGTCTCTCATGAATAAAAT
AAGTGAACTGAACCTTTTTATTGACAGATCTGAGAAGGAACTGAGCAAAGCCAAAGCTGTGAAA
GAGGATATGATGATCGAGGACAATCTTTTAAAGCTTCAAGTTAAACGTGCTCGAGAATTGCTTT
ACAGCAAGGCAGAGGAAGTCCTTTCTCTAGAGAAAAGGAAACAGCAGCTGGGCAAAGACATGGA
AGAGAGAGCTGAAGAAATTAAAGTGCACAAAGCCATGCTTACCTCACAGATCAGATGTGTTGAA
CAGCAGCGAAAAACTATGAGTTCTGAATTTCATGAGCGGCTAAGTAAAATTGATAAGCTTAAGA
ATAGATATGAAATTCTTACTGTTGTCATGCTGCCTCCTGAAGGAGAAGAGGAGAAAACACAGTC
CTATTATGTAATAAAGGCTGCTCAAGAAAAAGAAGAACTTCAAAGGGAAGGTGATAGCTTGGAT
GCTAAGATCAACAAAGCTGAAAAAGAAATCTATGCTTTGCAAAACACCTTGCAAGTACTTAACA
GCTGCAACAGCAATTATAAGCAATCTTTCAAAAAAGTGACTCCGTCAAAGCATGGAAAATACTT
TTGAAGTTATAGGACACTTAGCAAATAATGCCAAAGAGAAATTAACAGAGAAACAAACACTTGC
ATTTCAACTTCGTAAGGAGACTGAGGAGCAGAAGCCGAAATTGCAGCGAATAACTAAGCAGTGT
GGAAGACTCAGAAGAGAAATCCGCATTTTGAAACAAACAGATAATGAAACTCTAGAAGAACAGG
ACATTCAGCTCCGTGAGATCATACAGTTTCACAAGGACATTGACCAAATGTTAGTTAATGCCAT
GGAAAATGCAGAAATTCATGCCATCTTTAAAACATATTTTGAGCAGAACGGGTTAGAACTACCT
ACAGCAAGAGGCCCGAGCTCGAGATCTTCTTCCCAGTCTTCCTCCCTTTCATCATTCAGGTCGC
TCGAGGATGTAACTCTCCAGTCTCCCCCCACAGCTAAAGTGATACAGCTCAGATTCCCAGAGCC
TCCTCCAGCAACAAATGACAGTTCTAGGTCAGCTAGTAGTGGCAGTAATTCCAACATTCCTAAA
GAAAAAAAGCTCAGCAAATGAACATGCTTTTTTTTAAAAAAAAATCTTTTTATACATTTAGAAC
ACAAATGAAAATCTTATTAATAGTTAAGTCTCTCTCTTTTTCTGGGGCTTCATTTATTAATGAT
GCAGGCTTACTAAAATACTACCAAAAGTACAGAGCAGACAAAAGTTCTGTACAGTGGCTATAAG
AGCTGTCTGAGAAAAGAACAAAGGGAGTTTTGTGTTTGTTTTTTTCCTACTGTTTTATTTATAG
AGAAGGAAAACTGCAGAACCTTAGCCAAGCCACATGTGACAAAGCAGAGGGAAATAAGCAGGTT
TTTTTTTTTTTTACTAGAACATGTCTACAGTGTTAGATGTTTTATGAAGTAACACATTTATAAG
ATTCTTTCACTAATACACTTCTAAAGATTTATTCTATCTCTCAATAATGAAGTTTTCATTTACT
CTAGATCACCAAACTACCTTTTAAAATAAAAAATAAGCGAACAACTGTATTCTTCAGATGTTTT
TAAGGGGGTTAACATGAGGGAGGAGCTTGGGAAAGACCATCTTTTGTTTATTTGTACTGTTTAT
AATGTGTAACCAAAACACAGCATCATTCCCACTCCCTCAGGAAAAAGTTTAGTAAGAAAGACAC
TGTTTATGTATATGTACATATGCATTTGTCTCTATATGTGCACAAATAAAGTGAAACCTAAGCT
GTTAAGAATGTTTCTTCTCTGACCATGAAAGAACTGAACATATTAAATTTACACTGGAGGTAGA
TATTGCATACTATATTTAAAATTTTTTTTCCAGCTAATACTTTATTTCCAGCACTTTGACCTTT
TTGGGATAGCATATGAAATAATACTATAAAGCTAGATTTCAAATACATTACCATTCAGGTATAT
AAATCAGCATCTCCTTTAAACCTTTGGGAAAATCGTCATTACAGCAGTGATTGTCTTAGAACTC
AGTTACTTCTGGAAACGCAGCACTGGTAGGAAATCTGTTTCTACTAATGATCATTTTAAATTTA
GAAACATAGTTAAGTCTAATAAGTAAAAAGGCTAAGAAAACTCTGGGCACTTTTTGGTTCAAAC
ACTGCTTAAATTAAATTCACAACATGTTTAGGATCTAAAACTGATTAATCCCATCATTTTGTTT
ATCAATGTTGTGATTCTCAGTTATGTTTTAGTTTGTAAGTTACTTAGAACTTAAAACATAAACT
TTGTGTCCTACAAAGGCAGAGGTTTTGTTCCTAGGGAGATTACTTTTCTAAGCCTTTTCTTTTC
GTAATCTAGAGATAATTAACTATCACAGGTTTATTAAAGGAACATATAAGCAAAATACACTGGC
ACTAAAACAGGGTTAACTGCATAGTAAGTAGTTAGCTTCTACCTATGGAATCACTACTAGATCC
TACTCTGGAATGGCCAGCATCCAAGTTTACATTTAACCACTATACTAACTGCATGTAGTCATGT
TAAATGGGAGGACAAAGGATGAATCCTGTTTTCAGATCTGGAATATCTTAACATCCAGAAGTCA
CAGTTCTACTCATGGAAATTAAGACAAAGCTGTCCAGGGAACATGCAAACTATGGACATATTAA
TGTAAAAGAAACTAATGATGACAGAACTGAGAATCAATTTAAATTCTCAATAATTTTTTTCTGT
GACGACTCCTCAAATATTCCATGGAACTAGATGCTCAGTGTAGTCTGCTTAACTTAGAATGTCC
TACTAGGAAAGATGTAATTTTCAAAGTCTGATAGCCTTCCCTACAAGGCACTATCCTAAGGGTT
AAGTAACATGGTATGTGTAAGATTACAAGGTGTACTAGGGATTCTCAAAGATCAAGGGGTGTGC
ATAGAGGTGGTTTTCACATAACAACAACAAACCCTAGCTATGTAGGAGTAAGTCTGGAACTAGT
GAGACATAGAATACTCTTAAGAGTTCCTTGGTGCTGGGCTAGCAAAATGGCCCAGTGGATAGAG
GTACTTGCTGTCAAGCCCAATGAGCCAAGATTCATTCCTGGGACCCGTAAGGTGGAAAAAATTC
CTTCAAGTTGTCCCCCAAAGTCCACATACGCTCATCATCCTTACCCCAGCCCCCATGATGATGA
TGATGATTTCCTTGGTGTAAAAAACAAATGTTGAAGTGATTATGAAATTTCTGCTGCCATTATT
TATTGTTCTTAATCAAGGTTTCTTTTCTGTATTGTACTGTAAAATAACTGTTATATTTTACAGT
AGTTTTCCATCACTGTAATTTGGTACAAATACTATGTATCAGTATTAAAGCATTTTACTGGTAG
AAACACA

hide sequence

RefSeq Acc Id:

XR_003954358

RefSeq Status:

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	33,867,217 - 33,898,473 (-)	NCBI
GRCm38	3	33,813,068 - 33,844,324 (-)	NCBI

Sequence:

show sequence

CTTCCTGTTTGGTAACTAAGGGCGCCTGGCTGTTGCTAGGGCCGCGGAATACAGACGGTTAGGC
TTGGCTGCGAGCTCCAGGGAACGGTTTTGGGTGGCTTGTCTGTGATTCCTTTGAGCCTCGTACG
CCATGTGCAGTGAGTTCTTGTCAGAGCTGCACTGGGAAGATGGGTTCGCCATCCCCGTGGCCAA
TCAGGAGAACAAGATCCTGGAGGATCAGTTGGCAAAGCTCCGAGAGGAAAAATCAAACTTGCAA
GATCAGCTTCATGACTATGAAGAACGAATTAATTCTATGACTTCTCACCTTAAAAATGTGAATC
AGGAATTTTTATTTACACAGTCTCTTTACAAAGCAAGGGAGAGTGAGATCGAGAGCGAAGAACA
TTTTAAGGCCATTGCTGAAAGAGAGCTGGGCCGAGTCAAGAATGAGACCCAACTGCTGGAGAAG
GAGATGGCGATCATCCGGGAGCGCAAGAGCCAAATGGAAAACAATATATTTAAAACTACTCAAA
AGCTGGATGACTTGAAATGTCAGATGAACTGGGACCAGCAAGCCTTGGAGGCCTGGCTGGAAGA
ATCGGCTCACAAAGACAGTGACTCTCTGACCCTTCAGAAGTACTCTCAGCAAGACGATAACAAA
ATCAGGGCCCTGACTCTGCAGTTAGAAAAGCTGACCATGGAGTATAACGAGAAGAGGAAGCTTC
TAGACAGTGAACTGACAGAGACGCTAAGTGCGCAGTTAGAATTAGATAAAGCTGCACAGGATTT
CCGGAAGATTCACTTAGAACGGCAGGAGCTCATTCAGCAGTGGGAGAACACCATTGAGCAGATG
CAGAGGCGGGATCAGGAGATAGACAACTGTGCCCTGGCATTATCACGAATAAAGCAGGAAGCAA
GAGAAAAAGAAGGCGTGGTGAAAGAGAAGATCAAGTTTCTGGAAAATGAGGTTGAGAACAACAT
AGAATACGAGAGAAAAATTTCTGTTGCTGAGCGGAAAGTGTCCAAGTGCAGGATGGACTACCAG
CGTCACGAAGGCAACAGAAGTCAGCTGAAGGATGAGCTGGATACTTTAAAAACCACTCTCAACA
GAACATCCAGTGACTTACAAGCTCTGAGGAAAAACATTTCCAAAGTAAAGAAGGACATCTTTGA
CGAAACATTAAGATTACAAAAACTTAAACATCACAATGAGGTTGTAAAACATAAATTAAAGATG
ATAACTGAGAAGACCCTATCTATTGAAGAGAAAGCTACCAACATGGAAGACATGCTGAAGGAGG
AGGAGAAAGGCCTGAAGGAAGTGGAGGTTCAATTGGGCATAGTAAAAGACGTGTTATTTAAGAA
AGTCCAAGAGTTACAGAACGAGATAGCGAAAGAGAAAGCCCTGGTATCAGAAATTGAAGGAACC
CGTTCCTCCCTGAAACATCTTAACAAACAGTTACACAAACTGGATTTTGAAACCCTGAAGCAGC
AGGAAATTATGTACAGTCAGGATTTTTACATTCAGCAAGTAGAACGCAGAATGTCACGATTAAA
AGGAGAAATTAATTCAGAGGAAAAGCAAGCCCTTGAAGCAAAAATCCTTGAACTTAAGAAGACA
ATGGATGAGAAAAAATCCACACTTTCCCTTTTGGAATCCCAGATCAAGAAGCTCCATAATGACC
TCTACTTCATTAAGAAATCAAATGGTAAAAACAATGATGAGAAAGAGTCTCTCATGAATAAAAT
AAGTGAACTGAACCTTTTTATTGACAGATCTGAGAAGGAACTGAGCAAAGCCAAAGCTGTGAAA
GAGGTGTGATGAATCTGGATACATAGTAAGCCCCATGCTTCCACAGGAATGGGAACCACAGGAA
AATAGAAAACAAGGAAGCAATTAAGGAGAAAATCACCTGATATGATGATCGAGGACAATCTTTT
AAAGCTTCAAGTTAAACGTGCTCGAGAATTGCTTTACAGCAAGGCAGAGGAAGTCCTTTCTCTA
GAGAAAAGGAAACAGCAGCTGGGCAAAGACATGGAAGAGAGAGCTGAAGAAATTAAAGTGCACA
AAGCCATGCTTACCTCACAGATCAGATGTGTTGAACAGCAGCGAAAAACTATGAGATTAAAACA
AGGGCTTCATGTATGCTGGACAAGATGAACTACATGCCTCAGCCTTCTTCTGAGTTCTGAATTT
CATGAGCGGCTAAGTAAAATTGATAAGCTTAAGAATAGATATGAAATTCTTACTGTTGTCATGC
TGCCTCCTGAAGGAGAAGAGGAGAAAACACAGTCCTATTATGTAATAAAGGCTGCTCAAGAAAA
AGAAGAACTTCAAAGGGAAGGTGATAGCTTGGATGCTAAGATCAACAAAGCTGAAAAAGAAATC
TATGCTTTGCAAAACACCTTGCAAGTACTTAACAGCTGCAACAGCAATTATAAGCAATCTTTCA
AAAAAGTGACTCCGTCAAGTGATGAGTATGCATTAAAAATTCAACTAGAAGAACAAAAAAGAAC
TGCAGATGAGAGATACAGATGCAAACAAAGGCAGATCAGAGAACTTCAAGAAGATATCCAGAGC
ATGGAAAATACTTTTGAAGTTATAGGACACTTAGCAAATAATGCCAAAGAGAAATTAACAGAGA
AACAAACACTTGCATTTCAACTTCGTAAGGAGACTGAGGAGCAGAAGCCGAAATTGCAGCGAAT
AACTAAGCAGTGTGGAAGACTCAGAAGAGAAATCCGCATTTTGAAACAAACAGATAATGAAACT
CTAGAAGAACAGGACATTCAGCTCCGTGAGATCATACAGTTTCACAAGGACATTGACCAAATGT
TAGTTAATGCCATGGAAAATGCAGAAATTCATGCCATCTTTAAAACATATTTTGAGCAGAACGG
GTTAGAACTACCTACAGCAAGAGGCCCGAGCTCGAGATCTTCTTCCCAGTCTTCCTCCCTTTCA
TCATTCAGGTCGCTCGAGGATGTAACTCTCCAGTCTCCCCCCACAGCTAAAGTGATACAGCTCA
GATTCCCAGAGCCTCCTCCAGCAACAAATGACAGTTCTAGGTCAGCTAGTAGTGGCAGTAATTC
CAACATTCCTAAA

hide sequence

RefSeq Acc Id:

XR_003954359

RefSeq Status:

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	33,869,642 - 33,898,473 (-)	NCBI
GRCm38	3	33,819,904 - 33,844,323 (-)	NCBI

Sequence:

show sequence

CTTCCTGTTTGGTAACTAAGGGCGCCTGGCTGTTGCTAGGGCCGCGGAATACAGACGGTTAGGC
TTGGCTGCGAGCTCCAGGGAACGGTTTTGGGTGGCTTGTCTGTGATTCCTTTGAGCCTCGTACG
CCATGTGCAGTGAGTTCTTGTCAGAGCTGCACTGGGAAGATGGGTTCGCCATCCCCGTGGCCAA
TCAGGAGAACAAGATCCTGGAGGATCAGTTGGCAAAGCTCCGAGAGGAAAAATCAAACTTGCAA
GATCAGCTTCATGACTATGAAGAACGAATTAATTCTATGACTTCTCACCTTAAAAATGTGAATC
AGGAATTTTTATTTACACAGTCTCTTTACAAAGCAAGGGAGAGTGAGATCGAGAGCGAAGAACA
TTTTAAGGCCATTGCTGAAAGAGAGCTGGGCCGAGTCAAGAATGAGACCCAACTGCTGGAGAAG
GAGATGGCGATCATCCGGGAGCGCAAGAGCCAAATGGAAAACAATATATTTAAAACTACTCAAA
AGCTGGATGACTTGAAATGTCAGATGAACTGGGACCAGCAAGCCTTGGAGGCCTGGCTGGAAGA
ATCGGCTCACAAAGACAGTGACTCTCTGACCCTTCAGAAGTACTCTCAGCAAGACGATAACAAA
ATCAGGGCCCTGACTCTGCAGTTAGAAAAGCTGACCATGGAGTATAACGAGAAGAGGAAGCTTC
TAGACAGTGAACTGACAGAGACGCTAAGTGCGCAGTTAGAATTAGATAAAGCTGCACAGGATTT
CCGGAAGATTCACTTAGAACGGCAGGAGCTCATTCAGCAGTGGGAGAACACCATTGAGCAGATG
CAGAGGCGGGATCAGGAGATAGACAACTGTGCCCTGGCATTATCACGAATAAAGCAGGAAGCAA
GAGAAAAAGAAGGCGTGGTGAAAGAGAAGATCAAGTTTCTGGAAAATGAGGTTGAGAACAACAT
AGAATACGAGAGAAAAATTTCTGTTGCTGAGCGGAAAGTGTCCAAGTGCAGGATGGACTACCAG
CGTCACGAAGGCAACAGAAGTCAGCTGAAGGATGAGCTGGATACTTTAAAAACCACTCTCAACA
GAACATCCAGTGACTTACAAGCTCTGAGGAAAAACATTTCCAAAGTAAAGAAGGACATCTTTGA
CGAAACATTAAGATTACAAAAACTTAAACATCACAATGAGGTTGTAAAACATAAATTAAAGATG
ATAACTGAGAAGACCCTATCTATTGAAGAGAAAGCTACCAACATGGAAGACATGCTGAAGGAGG
AGGAGAAAGGCCTGAAGGAAGTGGAGGTTCAATTGGGCATAGTAAAAGACGTGTTATTTAAGAA
AGTCCAAGAGTTACAGAACGAGATAGCGAAAGAGAAAGCCCTGGTATCAGAAATTGAAGGAACC
CGTTCCTCCCTGAAACATCTTAACAAACAGTTACACAAACTGGATTTTGAAACCCTGAAGCAGC
AGGAAATTATGTACAGTCAGGATTTTTACATTCAGCAAGTAGAACGCAGAATGTCACGATTAAA
AGGAGAAATTAATTCAGAGGAAAAGCAAGCCCTTGAAGCAAAAATCCTTGAACTTAAGAAGACA
ATGGATGAGAAAAAATCCACACTTTCCCTTTTGGAATCCCAGATCAAGAAGCTCCATATCTGAG
AAGGAACTGAGCAAAGCCAAAGCTGTGAAAGAGGTGTGATGAATCTGGATACATAGATATGATG
ATCGAGGACAATCTTTTAAAGCTTCAAGTTAAACGTGCTCGAGAATTGCTTTACAGCAAGGCAG
AGGAAGTCCTTTCTCTAGAGAAAAGGAAACAGCAGCTGGGCAAAGACATGGAAGAGAGAGCTGA
AGAAATTAAAGTGCACAAAGCCATGCTTACCTCACAGATCAGATGTGTTGAACAGCAGCGAAAA
ACTATGAGTTCTGAATTTCATGAGCGGCTAAGTAAAATTGATAAGCTTAAGAATAGATATGAAA
TTCTTACTGTTGTCATGCTGCCTCCTGAAGGAGAAGAGGAGAAAACACAGTCCTATTATGTAAT
AAAGGCTGCTCAAGAAAAAGAAGAACTTCAAAGGGAAGGTGATAGCTTGGATGCTAAGATCAAC
AAAGCTGAAAAAGAAATCTATGCTTTGCAAAACACCTTGCAAGTACTTAACAGCTGCAACAGCA
ATTATAAGCAATCTTTCAAAAAAGTGACTCCGTCAAGTGATGAGTATGCATTAAAAATTCAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_080498	(Get FASTA)	NCBI Sequence Viewer
	XP_006535561	(Get FASTA)	NCBI Sequence Viewer
	XP_006535562	(Get FASTA)	NCBI Sequence Viewer
	XP_006535563	(Get FASTA)	NCBI Sequence Viewer
	XP_011247988	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI38918	(Get FASTA)	NCBI Sequence Viewer
	AAI38921	(Get FASTA)	NCBI Sequence Viewer
	BAB29574	(Get FASTA)	NCBI Sequence Viewer
	BAC25166	(Get FASTA)	NCBI Sequence Viewer
	BAC26777	(Get FASTA)	NCBI Sequence Viewer
	BAE37082	(Get FASTA)	NCBI Sequence Viewer
	BAE37549	(Get FASTA)	NCBI Sequence Viewer
	EDL35029	(Get FASTA)	NCBI Sequence Viewer
	EDL35030	(Get FASTA)	NCBI Sequence Viewer
	EDL35031	(Get FASTA)	NCBI Sequence Viewer
	Q9D5Y1	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_080498 ⟸ NM_026222

- UniProtKB:

Q8CDG6 (UniProtKB/Swiss-Prot), Q9D5Y1 (UniProtKB/Swiss-Prot), Q3TQ36 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MCSEFLSELHWEDGFAIPVANQENKILEDQLAKLREEKSNLQDQLHDYEERINSMTSHLKNVNQ
EFLFTQSLYKARESEIESEEHFKAIAERELGRVKNETQLLEKEMAIIRERKSQMENNIFKTTQK
LDDLKCQMNWDQQALEAWLEESAHKDSDSLTLQKYSQQDDNKIRALTLQLEKLTMEYNEKRKLL
DSELTETLSAQLELDKAAQDFRKIHLERQELIQQWENTIEQMQRRDQEIDNCALALSRIKQEAR
EKEGVVKEKIKFLENEVENNIEYERKISVAERKVSKCRMDYQRHEGNRSQLKDELDTLKTTLNR
TSSDLQALRKNISKVKKDIFDETLRLQKLKHHNEVVKHKLKMITEKTLSIEEKATNMEDMLKEE
EKGLKEVEVQLGIVKDVLFKKVQELQNEIAKEKALVSEIEGTRSSLKHLNKQLHKLDFETLKQQ
EIMYSQDFYIQQVERRMSRLKGEINSEEKQALEAKILELKKTMDEKKSTLSLLESQIKKLHNDL
YFIKKSNGKNNDEKESLMNKISELNLFIDRSEKELSKAKAVKEDMMIEDNLLKLQVKRARELLY
SKAEEVLSLEKRKQQLGKDMEERAEEIKVHKAMLTSQIRCVEQQRKTMSSEFHERLSKIDKLKN
RYEILTVVMLPPEGEEEKTQSYYVIKAAQEKEELQREGDSLDAKINKAEKEIYALQNTLQVLNS
CNSNYKQSFKKVTPSSDEYALKIQLEEQKRTADERYRCKQRQIRELQEDIQSMENTFEVIGHLA
NNAKEKLTEKQTLAFQLRKETEEQKPKLQRITKQCGRLRREIRILKQTDNETLEEQDIQLREII
QFHKDIDQMLVNAMENAEIHAIFKTYFEQNGLELPTARGPSSRSSSQSSSLSSFRSLEDVTLQS
PPTAKVIQLRFPEPPPATNDSSRSASSGSNSNIPKEKKLSK

hide sequence

RefSeq Acc Id:

XP_006535561 ⟸ XM_006535498

- Peptide Label:

isoform X1

- Sequence:

show sequence

MCSEFLSELHWEDGFAIPVANQENKILEDQSLYKARESEIESEEHFKAIAERELGRVKNETQLL
EKEMAIIRERKSQMENNIFKTTQKLDDLKCQMNWDQQALEAWLEESAHKDSDSLTLQKYSQQDD
NKIRALTLQLEKLTMEYNEKRKLLDSELTETLSAQLELDKAAQDFRKIHLERQELIQQWENTIE
QMQRRDQEIDNCALALSRIKQEAREKEGVVKEKIKFLENEVENNIEYERKISVAERKVSKCRMD
YQRHEGNRSQLKDELDTLKTTLNRTSSDLQALRKNISKVKKDIFDETLRLQKLKHHNEVVKHKL
KMITEKTLSIEEKATNMEDMLKEEEKGLKEVEVQLGIVKDVLFKKVQELQNEIAKEKALVSEIE
GTRSSLKHLNKQLHKLDFETLKQQEIMYSQDFYIQQVERRMSRLKGEINSEEKQALEAKILELK
KTMDEKKSTLSLLESQIKKLHNDLYFIKKSNGKNNDEKESLMNKISELNLFIDRSEKELSKAKA
VKEDMMIEDNLLKLQVKRARELLYSKAEEVLSLEKRKQQLGKDMEERAEEIKVHKAMLTSQIRC
VEQQRKTMSSEFHERLSKIDKLKNRYEILTVVMLPPEGEEEKTQSYYVIKAAQEKEELQREGDS
LDAKINKAEKEIYALQNTLQVLNSCNSNYKQSFKKVTPSSDEYALKIQLEEQKRTADERYRCKQ
RQIRELQEDIQSMENTFEVIGHLANNAKEKLTEKQTLAFQLRKETEEQKPKLQRITKQCGRLRR
EIRILKQTDNETLEEQDIQLREIIQFHKDIDQMLVNAMENAEIHAIFKTYFEQNGLELPTARGP
SSRSSSQSSSLSSFRSLEDVTLQSPPTAKVIQLRFPEPPPATNDSSRSASSGSNSNIPKEKKLS
K

hide sequence

RefSeq Acc Id:

XP_006535562 ⟸ XM_006535499

- Peptide Label:

isoform X2

- Sequence:

show sequence

MCSEFLSELHWEDGFAIPVANQENKILEDQLAKLREEKSNLQDQLHDYEERINSMTSHLKNVNQ
EFLFTQSLYKARESEIESEEHFKAIAERELGRVKNETQLLEKEMAIIRERKSQMENNIFKTTQK
LDDLKCQMNWDQQALEAWLEESAHKDSDSLTLQKYSQQDDNKIRALTLQLEKLTMEYNEKRKLL
DSELTETLSAQLELDKAAQDFRKIHLERQELIQQWENTIEQMQRRDQEIDNCALALSRIKQEAR
EKEGVVKEKIKFLENEVENNIEYERKISVAERKVSKCRMDYQRHEGNRSQLKDELDTLKTTLNR
TSSDLQALRKNISKVKKDIFDETLRLQKLKHHNEVVKHKLKMITEKTLSIEEKATNMEDMLKEE
EKGLKEVEVQLGIVKDVLFKKVQELQNEIAKEKALVSEIEGTRSSLKHLNKQLHKLDFETLKQQ
EIMYSQDFYIQQVERRMSRLKGEINSEEKQALEAKILELKKTMDEKKSTLSLLESQIKKLHDMM
IEDNLLKLQVKRARELLYSKAEEVLSLEKRKQQLGKDMEERAEEIKVHKAMLTSQIRCVEQQRK
TMSSEFHERLSKIDKLKNRYEILTVVMLPPEGEEEKTQSYYVIKAAQEKEELQREGDSLDAKIN
KAEKEIYALQNTLQVLNSCNSNYKQSFKKVTPSSDEYALKIQLEEQKRTADERYRCKQRQIREL
QEDIQSMENTFEVIGHLANNAKEKLTEKQTLAFQLRKETEEQKPKLQRITKQCGRLRREIRILK
QTDNETLEEQDIQLREIIQFHKDIDQMLVNAMENAEIHAIFKTYFEQNGLELPTARGPSSRSSS
QSSSLSSFRSLEDVTLQSPPTAKVIQLRFPEPPPATNDSSRSASSGSNSNIPKEKKLSK

hide sequence

RefSeq Acc Id:

XP_006535563 ⟸ XM_006535500

- Peptide Label:

isoform X3

- Sequence:

show sequence

MCSEFLSELHWEDGFAIPVANQENKILEDQLAKLREEKSNLQDQLHDYEERINSMTSHLKNVNQ
EFLFTQSLYKARESEIESEEHFKAIAERELGRVKNETQLLEKEMAIIRERKSQMENNIFKTTQK
LDDLKCQMNWDQQALEAWLEESAHKDSDSLTLQKYSQQDDNKIRALTLQLEKLTMEYNEKRKLL
DSELTETLSAQLELDKAAQDFRKIHLERQELIQQWENTIEQMQRRDQEIDNCALALSRIKQEAR
EKEGVVKEKIKFLENEVENNIEYERKISVAERKVSKCRMDYQRHEGNRSQLKDELDTLKTTLNR
TSSDLQALRKNISKVKKDIFDETLRLQKLKHHNEVVKHKLKMITEKTLSIEEKATNMEDMLKEE
EKGLKEVEVQLGIVKDVLFKKVQELQNEIAKEKALVSEIEGTRSSLKHLNKQLHKLDFETLKQQ
EIMYSQDFYIQQVERRMSRLKGEINSEEKQALEAKILELKKTMDEKKSTLSLLESQIKKLHNDL
YFIKKSNGKNNDEKESLMNKISELNLFIDRSEKELSKAKAVKEDMMIEDNLLKLQVKRARELLY
SKAEEVLSLEKRKQQLGKDMEERAEEIKVHKAMLTSQIRCVEQQRKTMRLKQGLHVCWTR

hide sequence

RefSeq Acc Id:

XP_011247988 ⟸ XM_011249686

- Peptide Label:

isoform X4

- Sequence:

show sequence

MRTSSDLQALRKNISKVKKDIFDETLRLQKLKHHNEVVKHKLKMITEKTLSIEEKATNMEDMLK
EEEKGLKEVEVQLGIVKDVLFKKVQELQNEIAKEKALVSEIEGTRSSLKHLNKQLHKLDFETLK
QQEIMYSQDFYIQQVERRMSRLKGEINSEEKQALEAKILELKKTMDEKKSTLSLLESQIKKLHN
DLYFIKKSNGKNNDEKESLMNKISELNLFIDRSEKELSKAKAVKEDMMIEDNLLKLQVKRAREL
LYSKAEEVLSLEKRKQQLGKDMEERAEEIKVHKAMLTSQIRCVEQQRKTMSSEFHERLSKIDKL
KNRYEILTVVMLPPEGEEEKTQSYYVIKAAQEKEELQREGDSLDAKINKAEKEIYALQNTLQVL
NSCNSNYKQSFKKVTPSSDEYALKIQLEEQKRTADERYRCKQRQIRELQEDIQSMENTFEVIGH
LANNAKEKLTEKQTLAFQLRKETEEQKPKLQRITKQCGRLRREIRILKQTDNETLEEQDIQLRE
IIQFHKDIDQMLVNAMENAEIHAIFKTYFEQNGLELPTARGPSSRSSSQSSSLSSFRSLEDVTL
QSPPTAKVIQLRFPEPPPATNDSSRSASSGSNSNIPKEKKLSK

hide sequence

RefSeq Acc Id:

ENSMUSP00000029222 ⟸ ENSMUST00000029222

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9D5Y1-F1-model_v2	AlphaFold	Q9D5Y1	1-937	view protein structure

Promoters

RGD ID:

6833541

Promoter ID:

MM_KWN:34028

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, BoneMarrow_2Hour, Brain, Kidney, MEF_B4, MEF_B6

Transcripts:

NM_026222, OTTMUST00000065476, OTTMUST00000065477, UC008OXJ.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	3	33,743,036 - 33,743,536 (-)	MPROMDB

RGD ID:

6880466

Promoter ID:

EPDNEW_M3684

Type:

initiation region

Name:

Ccdc39_1

Description:

Mus musculus coiled-coil domain containing 39 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	3	33,844,272 - 33,844,332	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1289263	AgrOrtholog
Ensembl Genes	ENSMUSG00000027676	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein	ENSMUSP00000029222	ENTREZGENE
	ENSMUSP00000029222.6	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000029222	ENTREZGENE
	ENSMUST00000029222.8	UniProtKB/Swiss-Prot
InterPro	CCDC39	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:51938	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:1289263	ENTREZGENE
NCBI Gene	51938	ENTREZGENE
PANTHER	COILED-COIL DOMAIN-CONTAINING PROTEIN 39	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR18962	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Ccdc39	PhenoGen
Superfamily-SCOP	Myosin rod fragments	UniProtKB/TrEMBL
	Tropomyosin	UniProtKB/Swiss-Prot
UniProt	CCD39_MOUSE	UniProtKB/Swiss-Prot
	Q3TQ36	ENTREZGENE, UniProtKB/TrEMBL
	Q8CDG6	ENTREZGENE
	Q8CF19_MOUSE	UniProtKB/TrEMBL
	Q9D5Y1	ENTREZGENE
UniProt Secondary	B2RSM0	UniProtKB/Swiss-Prot
	Q8CDG6	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-04-01	Ccdc39	coiled-coil domain containing 39	AI844750	expressed sequence AI844750	Data Merged	737654	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Mammalian Phenotype