Commd10 (COMM domain containing 10) - Rat Genome Database

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Gene: Commd10 (COMM domain containing 10) Mus musculus
Analyze
Symbol: Commd10
Name: COMM domain containing 10
RGD ID: 1332145
MGI Page MGI
Description: Predicted to be located in nucleoplasm. Orthologous to human COMMD10 (COMM domain containing 10).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310003A05Rik; AU019438; COMM domain-containing protein 10; down-regulated in W/WV mouse stomach 2; DRWM; DRWMS2; mDRWMS2; Tg(Vav1-cre)1Kio; Tg(Vav1-cre)A2Kio; Tg(Vav1-icre)A2Kio; Vav-cre; Vav-iCre; Vav1-Cre; VavCre
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391847,091,917 - 47,242,435 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1847,091,883 - 47,367,351 (+)EnsemblGRCm39 Ensembl
GRCm381846,958,819 - 47,087,995 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1846,958,816 - 47,234,284 (+)EnsemblGRCm38mm10GRCm38
MGSCv371847,118,530 - 47,247,649 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361847,084,207 - 47,213,326 (+)NCBIMGSCv36mm8
Celera1848,320,570 - 48,450,579 (+)NCBICelera
Cytogenetic Map18CNCBI
cM Map1824.9NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
nucleoplasm  (IEA,ISO)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal acute inflammation  (IAGP)
abnormal B cell differentiation  (IAGP)
abnormal blinking  (IAGP)
abnormal blood coagulation  (IAGP)
abnormal blood vessel morphology  (IAGP)
abnormal bone marrow cell morphology/development  (IAGP)
abnormal bone marrow cell physiology  (IAGP)
abnormal bone marrow morphology  (IAGP)
abnormal calcium ion homeostasis  (IAGP)
abnormal CD4-positive, alpha beta T cell morphology  (IAGP)
abnormal CD4-positive, alpha-beta T cell physiology  (IAGP)
abnormal CD8-positive, alpha-beta cytotoxic T cell morphology  (IAGP)
abnormal cell cycle  (IAGP)
abnormal cell differentiation  (IAGP)
abnormal cell physiology  (IAGP)
abnormal circulating interleukin level  (IAGP)
abnormal class switch recombination  (IAGP)
abnormal common lymphocyte progenitor cell morphology  (IAGP)
abnormal common myeloid progenitor cell morphology  (IAGP)
abnormal cytokine level  (IAGP)
abnormal definitive hematopoiesis  (IAGP)
abnormal effector T cell morphology  (IAGP)
abnormal erythrocyte ion transport  (IAGP)
abnormal erythrocyte morphology  (IAGP)
abnormal erythrocyte physiology  (IAGP)
abnormal erythropoiesis  (IAGP)
abnormal germinal center B cell physiology  (IAGP)
abnormal granulocyte differentiation  (IAGP)
abnormal gut-associated lymphoid tissue morphology  (IAGP)
abnormal hematopoietic stem cell morphology  (IAGP)
abnormal hematopoietic stem cell physiology  (IAGP)
abnormal hematopoietic system morphology/development  (IAGP)
abnormal hematopoietic system physiology  (IAGP)
abnormal hemopoiesis  (IAGP)
abnormal immune system cell morphology  (IAGP)
abnormal immune system morphology  (IAGP)
abnormal immune system organ morphology  (IAGP)
abnormal immunoglobulin heavy chain V(D)J recombination  (IAGP)
abnormal interleukin secretion  (IAGP)
abnormal iron homeostasis  (IAGP)
abnormal leukocyte morphology  (IAGP)
abnormal liver morphology  (IAGP)
abnormal lymphatic vessel morphology  (IAGP)
abnormal lymphocyte physiology  (IAGP)
abnormal lymphopoiesis  (IAGP)
abnormal mast cell differentiation  (IAGP)
abnormal megakaryocyte differentiation  (IAGP)
abnormal megakaryocyte progenitor cell morphology  (IAGP)
abnormal mononuclear cell morphology  (IAGP)
abnormal myelopoiesis  (IAGP)
abnormal neutrophil morphology  (IAGP)
abnormal neutrophil physiology  (IAGP)
abnormal NK cell differentiation  (IAGP)
abnormal NK cell morphology  (IAGP)
abnormal NK cell physiology  (IAGP)
abnormal placenta morphology  (IAGP)
abnormal proerythroblast morphology  (IAGP)
abnormal renal glomerulus morphology  (IAGP)
abnormal spleen B cell follicle morphology  (IAGP)
abnormal spleen morphology  (IAGP)
abnormal spleen periarteriolar lymphoid sheath morphology  (IAGP)
abnormal spleen white pulp morphology  (IAGP)
abnormal splenic cell ratio  (IAGP)
abnormal stress erythropoiesis  (IAGP)
abnormal thrombosis  (IAGP)
abnormal thymus morphology  (IAGP)
abnormal trophoblast layer morphology  (IAGP)
absent regulatory T cells  (IAGP)
absent spleen germinal center  (IAGP)
anemia  (IAGP)
arrested T cell differentiation  (IAGP)
decreased alpha-beta T cell number  (IAGP)
decreased B cell number  (IAGP)
decreased blood osmolality  (IAGP)
decreased body size  (IAGP)
decreased bone marrow cell number  (IAGP)
decreased CD4-positive, alpha-beta T cell number  (IAGP)
decreased CD8-positive, alpha-beta T cell number  (IAGP)
decreased circulating factor VIII level  (IAGP)
decreased circulating haptoglobin level  (IAGP)
decreased circulating interferon-alpha level  (IAGP)
decreased common lymphocyte progenitor cell number  (IAGP)
decreased common myeloid progenitor cell number  (IAGP)
decreased dendritic cell number  (IAGP)
decreased DN1 thymic pro-T cell number  (IAGP)
decreased DN2 thymocyte number  (IAGP)
decreased DN3 thymocyte number  (IAGP)
decreased double-negative T cell number  (IAGP)
decreased double-positive T cell number  (IAGP)
decreased erythroblast number  (IAGP)
decreased erythrocyte cell number  (IAGP)
decreased erythroid progenitor cell number  (IAGP)
decreased gamma-delta T cell number  (IAGP)
decreased granulocyte monocyte progenitor cell number  (IAGP)
decreased hematocrit  (IAGP)
decreased hematopoietic cell number  (IAGP)
decreased hematopoietic stem cell number  (IAGP)
decreased hemoglobin content  (IAGP)
decreased IgA level  (IAGP)
decreased IgD level  (IAGP)
decreased IgG1 level  (IAGP)
decreased IgG3 level  (IAGP)
decreased IgM level  (IAGP)
decreased immature B cell number  (IAGP)
decreased inflammatory response  (IAGP)
decreased interferon-gamma secretion  (IAGP)
decreased interleukin-10 secretion  (IAGP)
decreased interleukin-12 secretion  (IAGP)
decreased interleukin-12b secretion  (IAGP)
decreased interleukin-5 secretion  (IAGP)
decreased interleukin-6 secretion  (IAGP)
decreased leukocyte cell number  (IAGP)
decreased lymphocyte cell number  (IAGP)
decreased macrophage cell number  (IAGP)
decreased mature NK cell number  (IAGP)
decreased mean corpuscular hemoglobin  (IAGP)
decreased mean corpuscular hemoglobin concentration  (IAGP)
decreased mean corpuscular volume  (IAGP)
decreased megakaryocyte-erythroid progenitor cell number  (IAGP)
decreased myeloid cell number  (IAGP)
decreased neutrophil cell number  (IAGP)
decreased NK cell number  (IAGP)
decreased Peyer's patch number  (IAGP)
decreased physiological sensitivity to xenobiotic  (IAGP)
decreased plasmacytoid dendritic cell number  (IAGP)
decreased pre-B cell number  (IAGP)
decreased pro-B cell number  (IAGP)
decreased salivation  (IAGP)
decreased spleen red pulp amount  (IAGP)
decreased spleen weight  (IAGP)
decreased spleen white pulp amount  (IAGP)
decreased susceptibility to Herpesvirales infection  (IAGP)
decreased T cell number  (IAGP)
decreased T cell proliferation  (IAGP)
decreased thymocyte number  (IAGP)
decreased transitional stage T2 B cell number  (IAGP)
decreased tumor growth/size  (IAGP)
decreased tumor latency  (IAGP)
decreased tumor necrosis factor secretion  (IAGP)
edema  (IAGP)
enlarged axillary lymph nodes  (IAGP)
enlarged inguinal lymph nodes  (IAGP)
enlarged liver  (IAGP)
enlarged spleen  (IAGP)
extramedullary hematopoiesis  (IAGP)
hemolytic anemia  (IAGP)
hepatic necrosis  (IAGP)
hypochromic microcytic anemia  (IAGP)
impaired natural killer cell mediated cytotoxicity  (IAGP)
impaired neutrophil chemotaxis  (IAGP)
impaired neutrophil recruitment  (IAGP)
increased anti-nuclear antigen antibody level  (IAGP)
increased autoantibody level  (IAGP)
increased B cell number  (IAGP)
increased bone marrow cell number  (IAGP)
increased CD4-positive, alpha-beta T cell number  (IAGP)
increased CD8-positive, alpha-beta T cell number  (IAGP)
increased circulating alanine transaminase level  (IAGP)
increased circulating erythropoietin level  (IAGP)
increased common lymphocyte progenitor cell number  (IAGP)
increased eosinophil cell number  (IAGP)
increased erythroblast number  (IAGP)
increased erythrocyte cell number  (IAGP)
increased erythrocyte osmotic fragility  (IAGP)
increased erythroid progenitor cell number  (IAGP)
increased granulocyte monocyte progenitor cell number  (IAGP)
increased granulocyte number  (IAGP)
increased heart rate  (IAGP)
increased hematocrit  (IAGP)
increased hematopoietic cell number  (IAGP)
increased hematopoietic stem cell number  (IAGP)
increased hemoglobin content  (IAGP)
increased IgG1 level  (IAGP)
increased IgG2b level  (IAGP)
increased IgM level  (IAGP)
increased immature NK cell number  (IAGP)
increased incidence of induced tumors  (IAGP)
increased leukocyte cell number  (IAGP)
increased lymphocyte cell number  (IAGP)
increased macrophage cell number  (IAGP)
increased mean corpuscular hemoglobin  (IAGP)
increased mean corpuscular volume  (IAGP)
increased megakaryocyte cell number  (IAGP)
increased megakaryocyte progenitor cell number  (IAGP)
increased megakaryocyte-erythroid progenitor cell number  (IAGP)
increased metastatic potential  (IAGP)
increased monocyte cell number  (IAGP)
increased myeloid cell number  (IAGP)
increased neutrophil cell number  (IAGP)
increased NK T cell number  (IAGP)
increased physiological sensitivity to xenobiotic  (IAGP)
increased red blood cell distribution width  (IAGP)
increased regulatory T cell number  (IAGP)
increased spleen weight  (IAGP)
increased splenocyte number  (IAGP)
increased susceptibility to autoimmune disorder  (IAGP)
increased susceptibility to bacterial infection  (IAGP)
increased susceptibility to bacterial infection induced morbidity/mortality  (IAGP)
increased susceptibility to Coronaviridae infection  (IAGP)
increased susceptibility to Coronaviridae infection induced morbidity/mortality  (IAGP)
increased susceptibility to fungal infection  (IAGP)
increased susceptibility to induced morbidity/mortality  (IAGP)
increased susceptibility to xenobiotic induced morbidity/mortality  (IAGP)
increased T cell apoptosis  (IAGP)
increased T cell number  (IAGP)
increased urine protein level  (IAGP)
intermingled spleen red and white pulp  (IAGP)
kidney inflammation  (IAGP)
lethality throughout fetal growth and development, complete penetrance  (IAGP)
limb paralysis  (IAGP)
macrocytosis  (IAGP)
microcytic anemia  (IAGP)
myelofibrosis  (IAGP)
neonatal lethality  (IAGP)
no abnormal phenotype detected  (IAGP)
pale kidney  (IAGP)
pale liver  (IAGP)
pallor  (IAGP)
pancreas inflammation  (IAGP)
polycythemia  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature death  (IAGP)
prenatal lethality, complete penetrance  (IAGP)
prenatal lethality, incomplete penetrance  (IAGP)
preweaning lethality, complete penetrance  (IEA)
preweaning lethality, incomplete penetrance  (IAGP)
reticulocytosis  (IAGP)
salivary gland degeneration  (IAGP)
salivary gland inflammation  (IAGP)
small spleen  (IAGP)
small thymus  (IAGP)
spherocytosis  (IAGP)
spleen fibrosis  (IAGP)
spleen hyperplasia  (IAGP)
tachypnea  (IAGP)
thrombocytopenia  (IAGP)
thrombocytosis  (IAGP)
thymus atrophy  (IAGP)
thymus hypoplasia  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
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PMID:18676810   PMID:18805964   PMID:19109233   PMID:19169242   PMID:19247966   PMID:19321776   PMID:19345119   PMID:19797524   PMID:20080761   PMID:20154226   PMID:20360386   PMID:20371744  
PMID:20427763   PMID:20585934   PMID:20601952   PMID:20639863   PMID:21130157   PMID:21148330   PMID:21167753   PMID:21187410   PMID:21258009   PMID:21267068   PMID:21339326   PMID:21385828  
PMID:21572028   PMID:21603616   PMID:21670475   PMID:21677750   PMID:21737689   PMID:21828136   PMID:21844204   PMID:21865342   PMID:21880987   PMID:21972416   PMID:21998456   PMID:22186994  
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PMID:22863835   PMID:22908325   PMID:22958933   PMID:23103132   PMID:23188081   PMID:23213261   PMID:23219873   PMID:23263556   PMID:23264594   PMID:23293022   PMID:23293354   PMID:23300832  
PMID:23326559   PMID:23345330   PMID:23377280   PMID:23415223   PMID:23434755   PMID:23434825   PMID:23463102   PMID:23499491   PMID:23502961   PMID:23543053   PMID:23670180   PMID:23684610  
PMID:23684985   PMID:23708969   PMID:23727242   PMID:23770640   PMID:23795291   PMID:23894152   PMID:23913046   PMID:23958952   PMID:23979601   PMID:24030045   PMID:24048899   PMID:24121508  
PMID:24204913   PMID:24209759   PMID:24446236   PMID:24451543   PMID:24465765   PMID:24487275   PMID:24494196   PMID:24509509   PMID:24553180   PMID:24567373   PMID:24591644   PMID:24606906  
PMID:24631153   PMID:24670648   PMID:24677539   PMID:24705491   PMID:24714492   PMID:24786772   PMID:24788518   PMID:24820309   PMID:24857755   PMID:24893313   PMID:24894949   PMID:24895007  
PMID:24911523   PMID:25020912   PMID:25057009   PMID:25079320   PMID:25129145   PMID:25139355   PMID:25201874   PMID:25234167   PMID:25246544   PMID:25263125   PMID:25308957   PMID:25323585  
PMID:25412626   PMID:25417109   PMID:25436971   PMID:25461254   PMID:25516969   PMID:25552701   PMID:25562324   PMID:25573994   PMID:25583527   PMID:25591498   PMID:25611385   PMID:25624444  
PMID:25624445   PMID:25732600   PMID:25737499   PMID:25772358   PMID:25787118   PMID:25801035   PMID:25831528   PMID:25847946   PMID:25884630   PMID:25903647   PMID:25915733   PMID:25965571  
PMID:25968920   PMID:25992544   PMID:25992862   PMID:26001274   PMID:26089398   PMID:26108693   PMID:26124281   PMID:26147683   PMID:26173741   PMID:26205492   PMID:26219591   PMID:26232433  
PMID:26401001   PMID:26414765   PMID:26414766   PMID:26522985   PMID:26571395   PMID:26595813   PMID:26642852   PMID:26667169   PMID:26668377   PMID:26680207   PMID:26682986   PMID:26692072  
PMID:26749442   PMID:26787889   PMID:26789249   PMID:26795246   PMID:26847029   PMID:26850790   PMID:26851218   PMID:26876172   PMID:26937964   PMID:26982726   PMID:27059842   PMID:27060169  
PMID:27076080   PMID:27129404   PMID:27163399   PMID:27183626   PMID:27207790   PMID:27225119   PMID:27271479   PMID:27287239   PMID:27297878   PMID:27304073   PMID:27312418   PMID:27320916  
PMID:27417580   PMID:27424808   PMID:27449297   PMID:27500495   PMID:27504807   PMID:27581360   PMID:27601261   PMID:27622329   PMID:27695000   PMID:27783956   PMID:27806947   PMID:27810912  
PMID:27827827   PMID:27872905   PMID:27879203   PMID:27881824   PMID:27929373   PMID:27939640   PMID:27951586   PMID:27956603   PMID:27956631   PMID:28005008   PMID:28114589   PMID:28182011  
PMID:28202494   PMID:28280037   PMID:28290449   PMID:28319097   PMID:28329690   PMID:28330582   PMID:28341702   PMID:28381565   PMID:28436956   PMID:28504697   PMID:28504706   PMID:28533268  
PMID:28576770   PMID:28577909   PMID:28634350   PMID:28636844   PMID:28642279   PMID:28646160   PMID:28671690   PMID:28674188   PMID:28714970   PMID:28724541   PMID:28805812   PMID:28826859  
PMID:28839100   PMID:28844837   PMID:28855737   PMID:28860338   PMID:28916263   PMID:28951422   PMID:28975680   PMID:29126797   PMID:29127143   PMID:29138493   PMID:29146882   PMID:29183988  
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PMID:29361554   PMID:29379138   PMID:29382756   PMID:29386112   PMID:29388727   PMID:29429943   PMID:29453398   PMID:29462197   PMID:29519941   PMID:29539633   PMID:29576450   PMID:29632143  
PMID:29643185   PMID:29643232   PMID:29704636   PMID:29768197   PMID:29769727   PMID:29785025   PMID:29804890   PMID:29878897   PMID:29894694   PMID:29904050   PMID:29967452   PMID:29972776  
PMID:30037215   PMID:30038282   PMID:30049881   PMID:30068598   PMID:30076146   PMID:30107174   PMID:30150673   PMID:30184499   PMID:30208327   PMID:30237863   PMID:30250136   PMID:30271915  
PMID:30314756   PMID:30374131   PMID:30388136   PMID:30423293   PMID:30425986   PMID:30446384   PMID:30451838   PMID:30463008   PMID:30475900   PMID:30487795   PMID:30553776   PMID:30566244  
PMID:30567843   PMID:30635284   PMID:30659012   PMID:30673615   PMID:30683698   PMID:30770250   PMID:30772497   PMID:30787448   PMID:30810242   PMID:30819915   PMID:30842549   PMID:30858552  
PMID:30897162   PMID:30910863   PMID:30917958   PMID:30952670   PMID:30959277   PMID:30962294   PMID:30967512   PMID:30973865   PMID:30991025   PMID:31031138   PMID:31031188   PMID:31068365  
PMID:31118412   PMID:31134061   PMID:31139183   PMID:31140976   PMID:31151988   PMID:31167772   PMID:31292217   PMID:31320508   PMID:31356168   PMID:31378673   PMID:31379128   PMID:31391476  
PMID:31405949   PMID:31406377   PMID:31406378   PMID:31434684   PMID:31434702   PMID:31451639   PMID:31456807   PMID:31467334   PMID:31477755   PMID:31481522   PMID:31530563   PMID:31534216  
PMID:31619554   PMID:31679686   PMID:31699777   PMID:31729420   PMID:31761723   PMID:31908356   PMID:31980536   PMID:32025719   PMID:32045471   PMID:32049013   PMID:32075733   PMID:32075740  
PMID:32096759   PMID:32111837   PMID:32129527   PMID:32130894   PMID:32142677   PMID:32169821   PMID:32176686   PMID:32192357   PMID:32229537   PMID:32246014   PMID:32259484   PMID:32265924  
PMID:32286311   PMID:32321925   PMID:32325033   PMID:32398640   PMID:32428860   PMID:32442405   PMID:32497523   PMID:32515223   PMID:32576838   PMID:32609955   PMID:32612238   PMID:32671208  
PMID:32704094   PMID:32807943   PMID:32929002   PMID:32930709   PMID:32951306   PMID:32956421   PMID:32958856   PMID:33027668   PMID:33036023   PMID:33103089   PMID:33150381   PMID:33224133  
PMID:33346030   PMID:33362210   PMID:33370780   PMID:33397967   PMID:33426789   PMID:33441309   PMID:33442062   PMID:33462315   PMID:33507234   PMID:33579786   PMID:33596429   PMID:33596533  
PMID:33600797   PMID:33636133   PMID:33637617   PMID:33664482   PMID:33705489   PMID:33743191   PMID:33753942   PMID:33765133   PMID:33837181   PMID:33859647   PMID:33931647   PMID:33956074  
PMID:34015056   PMID:34077737   PMID:34108937   PMID:34122445   PMID:34124040   PMID:34240701   PMID:34242617   PMID:34321607   PMID:34370827   PMID:34375613   PMID:34381449   PMID:34386488  
PMID:34406363   PMID:34421919   PMID:34431978   PMID:34450065   PMID:34459015   PMID:34506849   PMID:34546980   PMID:34576286   PMID:34611611   PMID:34678045   PMID:34732767   PMID:34788631  
PMID:34808021   PMID:34811541   PMID:34818550   PMID:34855941   PMID:34857757   PMID:34879240   PMID:34895467   PMID:34919144   PMID:34963058   PMID:34965439   PMID:34974065   PMID:35021072  
PMID:35022500   PMID:35031770   PMID:35042776   PMID:35045331   PMID:35074867   PMID:35087060   PMID:35091558   PMID:35101526   PMID:35133065   PMID:35143611   PMID:35172136   PMID:35210567  
PMID:35285071   PMID:35288551   PMID:35303436   PMID:35343899   PMID:35365653   PMID:35385339   PMID:35399538   PMID:35418614   PMID:35432339   PMID:35444273   PMID:35451955   PMID:35508166  
PMID:35603175   PMID:35603697   PMID:35658976   PMID:35703178   PMID:35704993   PMID:35726060   PMID:35729193   PMID:35732734   PMID:35747128   PMID:35815807   PMID:35857476   PMID:35864246  
PMID:35915095   PMID:35961320   PMID:35987460   PMID:36062803   PMID:36074090   PMID:36104564   PMID:36138028   PMID:36167470   PMID:36185806   PMID:36214220   PMID:36245043   PMID:36250465  
PMID:36388973   PMID:36395068   PMID:36451830   PMID:36490327   PMID:36528691   PMID:36652477   PMID:36719747   PMID:36807138   PMID:36862552   PMID:36976102   PMID:37018401   PMID:37045808  
PMID:37081886   PMID:37138018   PMID:37160922   PMID:37188813   PMID:37200093   PMID:37296274   PMID:37311757   PMID:37337907   PMID:37353528   PMID:37443277   PMID:37490346   PMID:37540600  
PMID:37550517   PMID:37595362   PMID:37703370   PMID:37722652   PMID:37723209   PMID:37742191   PMID:37749256   PMID:37795096   PMID:37838757   PMID:37922427   PMID:37950870   PMID:37983263  
PMID:37984799   PMID:38052207   PMID:38097610   PMID:38157491   PMID:38205244   PMID:38295174   PMID:38309273   PMID:38321106   PMID:38346162   PMID:38355793   PMID:38357791   PMID:38367238  
PMID:38402617   PMID:38438357   PMID:38498025   PMID:38573853   PMID:38658806   PMID:38750967   PMID:38765012   PMID:38815866   PMID:38838669   PMID:38896605   PMID:38918373   PMID:38937548  
PMID:39028754   PMID:39088321   PMID:39096902  


Genomics

Comparative Map Data
Commd10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391847,091,917 - 47,242,435 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1847,091,883 - 47,367,351 (+)EnsemblGRCm39 Ensembl
GRCm381846,958,819 - 47,087,995 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1846,958,816 - 47,234,284 (+)EnsemblGRCm38mm10GRCm38
MGSCv371847,118,530 - 47,247,649 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361847,084,207 - 47,213,326 (+)NCBIMGSCv36mm8
Celera1848,320,570 - 48,450,579 (+)NCBICelera
Cytogenetic Map18CNCBI
cM Map1824.9NCBI
COMMD10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385116,085,025 - 116,293,287 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5116,085,016 - 116,412,762 (+)EnsemblGRCh38hg38GRCh38
GRCh375115,420,722 - 115,628,984 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365115,448,626 - 115,656,880 (+)NCBINCBI36Build 36hg18NCBI36
Build 345115,448,625 - 115,656,877NCBI
Celera5111,369,127 - 111,578,514 (+)NCBICelera
Cytogenetic Map5q23.1NCBI
HuRef5110,601,462 - 110,809,519 (+)NCBIHuRef
CHM1_15114,853,501 - 115,061,550 (+)NCBICHM1_1
T2T-CHM13v2.05116,597,411 - 116,805,723 (+)NCBIT2T-CHM13v2.0
Commd10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81841,927,802 - 42,061,384 (+)NCBIGRCr8
mRatBN7.21839,741,219 - 39,874,801 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1839,741,298 - 39,874,903 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1841,774,508 - 41,907,990 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01842,476,755 - 42,610,256 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01840,269,855 - 40,403,350 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01841,022,487 - 41,158,374 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1841,022,552 - 41,154,932 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01840,666,615 - 40,798,878 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41841,226,869 - 41,362,841 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11841,264,409 - 41,400,381 (+)NCBI
Celera1837,992,809 - 38,125,779 (+)NCBICelera
Cytogenetic Map18q11NCBI
Commd10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540835,887,802 - 36,043,835 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540835,887,995 - 36,045,085 (+)NCBIChiLan1.0ChiLan1.0
COMMD10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24111,330,035 - 111,533,397 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15109,482,867 - 109,687,058 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05111,439,100 - 111,642,742 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15117,236,606 - 117,438,866 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5117,236,804 - 117,438,068 (+)Ensemblpanpan1.1panPan2
COMMD10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1115,800,880 - 5,985,775 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl115,800,928 - 5,984,924 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha115,951,513 - 6,136,406 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0115,792,736 - 5,977,761 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl115,792,791 - 5,979,955 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1115,741,476 - 5,926,343 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0115,819,121 - 6,004,160 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0116,070,827 - 6,255,975 (+)NCBIUU_Cfam_GSD_1.0
Commd10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213128,566,476 - 128,770,756 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367421,267,282 - 1,475,072 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367421,267,334 - 1,471,521 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
COMMD10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2120,238,614 - 120,445,021 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12120,238,543 - 120,444,409 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22125,144,480 - 125,375,337 (+)NCBISscrofa10.2Sscrofa10.2susScr3
COMMD10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12319,373,892 - 19,601,508 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2319,373,864 - 19,448,138 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603458,803,263 - 59,033,962 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Commd10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247335,561,391 - 5,751,334 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247335,563,258 - 5,751,340 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Commd10
5148 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:237
Count of miRNA genes:208
Interacting mature miRNAs:219
Transcripts:ENSMUST00000049388
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558743Kcal1_mkilocalorie 1 (mouse)Not determined181901887453018992Mouse
1302163Bmd16_mbone mineral density 16 (mouse)Not determined182966791463668060Mouse
11532716Sluc41c_msusceptibility to lung cancer 41c (mouse)182261991456620127Mouse
11532715Sluc41b_msusceptibility to lung cancer 41b (mouse)182261991456620127Mouse
10412184Sstapa1_mSuseptibility to Staphylococus aureus infection 1 (mouse)Not determined184654154657590708Mouse
11532710Sluc41a_msusceptibility to lung cancer 41a (mouse)182261991456620127Mouse
25823171Hrsq10_mhost response to SARS QTL 10, D4% weight (mouse)182724111558827077Mouse
11532709Sluc41_msusceptibility to lung cancer 41 (mouse)182095369457590708Mouse
1301400Lmr13_mleishmaniasis resistance 13 (mouse)Not determined182810938062109518Mouse
25823174Hrsq11_mhost response to SARS QTL 11, log titer (mouse)182724111558827077Mouse
1301215Thcr_mT helper cell response (mouse)Not determined184513060468778777Mouse
1300638Im7_mimmunoregulatory 7 (mouse)Not determined181901887453018992Mouse
25823173Hrsq12_mhost response to SARS QTL 12, hemorrhage (mouse)182489588178339555Mouse
1300994Pvcan3_mprotection against vaginal candidiasis 3 (mouse)Not determined181619964050199776Mouse
1301570Sluc14_msusceptibility to lung cancer 14 (mouse)Not determined182261991456620127Mouse
13504732Cath6_mcarotid atherosclerosis 6 (mouse)181363712647637126Mouse
1357639Obsty4_mobesity 4 (mouse)Not determined183961991484638778Mouse
1558849W3q15_mweight 3 weeks QTL 15 (mouse)Not determined18504111961272643Mouse
12880412V125Dq12_mvitamin D active form serum level QTL 12 (mouse)183023306764233067Mouse
1301771Pcyts6_mplasmacytoma susceptibility 6 (mouse)Not determined183565863269658851Mouse
1301902Hrtfm4_mheart failure modifier 4 (mouse)Not determined184331112077311343Mouse
1300877Adip8_madiposity 8 (mouse)Not determined182261991456620127Mouse
4141857Mhysq5_mmale hybrid sterility QTL 5 (mouse)Not determined2813060462130739Mouse
1300685Scc5_mcolon tumor susceptibility 5 (mouse)Not determined183198848065988629Mouse
4142366Chlq10_mcirculating hormone level QTL 10 (mouse)Not determined183629102270291180Mouse
12050070Nabq2_mnasal bone morphology QTL 2 (mouse)183910367773103793Mouse
1301307Phospq1_mphospholipid QTL 1 (mouse)Not determined181813970452139859Mouse
12904745Carcdq2_mcardiac collagen deposition QTL 2 (mouse)184642328780423287Mouse
11039493Ltpr8d_mLeishmania tropica response 8d (mouse)184687490380875042Mouse
1357690Vtbt19_mvertebral trabecular bone trait 19 (mouse)Not determined183309104367091221Mouse
11039494Ltpr8b_mLeishmania tropica response 8b (mouse)184687490380875042Mouse
4142031Moen1_mmodifier of engrailed QTL 1 (mouse)Not determined182411556058115730Mouse
15039381Ltgq8_mliver triglyceride QTL 8 (mouse)183820656972206569Mouse
12904950Smmq3_msoleus muscle mass QTL 3 (mouse)182605687560056875Mouse
15039383Mvlq5_mmicrovesicular liver lesion QTL 5 (mouse)183820656972206569Mouse
25823167Hrsq5_mhost response to SARS QTL 5, D3% weight (mouse)182724111558827077Mouse
1357603Mom3_mmodifier of Min 3 (mouse)Not determined181403002367098962Mouse
13463476Hctq8_mhematocrit QTL 8 (mouse)182121758055217727Mouse
27226723Tibw9_mtibia width 9, proximal, 16 week (mouse)18320000060933072Mouse
15039384Liviq1_mliver inflammation QTL 1 (mouse)183820656972206569Mouse
15039386Mvlq4_mmacrovesicular liver lesion QTL 4 (mouse)183820656972206569Mouse

Markers in Region
RH136393  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381847,087,545 - 47,087,744UniSTSGRCm38
MGSCv371847,247,199 - 47,247,398UniSTSGRCm37
Celera1848,450,129 - 48,450,328UniSTS
Cytogenetic Map18CUniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001418791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001418817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_184828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB052770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC117239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC132100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000049388   ⟹   ENSMUSP00000041650
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1847,091,883 - 47,221,062 (+)Ensembl
GRCm38.p6 Ensembl1846,958,816 - 47,087,995 (+)Ensembl
Ensembl Acc Id: ENSMUST00000234069
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1847,091,921 - 47,096,315 (+)Ensembl
GRCm38.p6 Ensembl1846,958,854 - 46,963,248 (+)Ensembl
Ensembl Acc Id: ENSMUST00000234085   ⟹   ENSMUSP00000157146
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1847,091,945 - 47,220,275 (+)Ensembl
GRCm38.p6 Ensembl1846,958,878 - 47,087,208 (+)Ensembl
Ensembl Acc Id: ENSMUST00000234124   ⟹   ENSMUSP00000157292
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1847,091,928 - 47,367,351 (+)Ensembl
GRCm38.p6 Ensembl1846,958,861 - 47,234,284 (+)Ensembl
Ensembl Acc Id: ENSMUST00000234280   ⟹   ENSMUSP00000157358
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1847,091,942 - 47,220,267 (+)Ensembl
GRCm38.p6 Ensembl1846,958,875 - 47,087,200 (+)Ensembl
Ensembl Acc Id: ENSMUST00000234376
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1847,096,623 - 47,220,171 (+)Ensembl
GRCm38.p6 Ensembl1846,963,556 - 47,087,104 (+)Ensembl
Ensembl Acc Id: ENSMUST00000234664
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1847,239,982 - 47,242,434 (+)Ensembl
GRCm38.p6 Ensembl1847,106,915 - 47,109,367 (+)Ensembl
Ensembl Acc Id: ENSMUST00000234701   ⟹   ENSMUSP00000157272
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1847,091,947 - 47,220,155 (+)Ensembl
GRCm38.p6 Ensembl1846,958,880 - 47,087,088 (+)Ensembl
Ensembl Acc Id: ENSMUST00000234944   ⟹   ENSMUSP00000156998
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1847,091,932 - 47,165,018 (+)Ensembl
GRCm38.p6 Ensembl1846,958,865 - 47,031,951 (+)Ensembl
Ensembl Acc Id: ENSMUST00000234952
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1847,091,925 - 47,123,869 (+)Ensembl
GRCm38.p6 Ensembl1846,958,858 - 46,990,802 (+)Ensembl
Ensembl Acc Id: ENSMUST00000234961   ⟹   ENSMUSP00000157148
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1847,091,928 - 47,168,874 (+)Ensembl
GRCm38.p6 Ensembl1846,958,861 - 47,035,807 (+)Ensembl
RefSeq Acc Id: NM_001418791   ⟹   NP_001405720
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,221,062 (+)NCBI
RefSeq Acc Id: NM_001418792   ⟹   NP_001405721
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,221,062 (+)NCBI
RefSeq Acc Id: NM_001418808   ⟹   NP_001405737
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,171,761 (+)NCBI
RefSeq Acc Id: NM_001418809   ⟹   NP_001405738
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,158,247 (+)NCBI
RefSeq Acc Id: NM_001418810   ⟹   NP_001405739
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,221,062 (+)NCBI
RefSeq Acc Id: NM_001418811   ⟹   NP_001405740
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,221,062 (+)NCBI
RefSeq Acc Id: NM_001418812   ⟹   NP_001405741
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,221,062 (+)NCBI
RefSeq Acc Id: NM_001418813   ⟹   NP_001405742
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,221,062 (+)NCBI
RefSeq Acc Id: NM_001418814   ⟹   NP_001405743
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,171,761 (+)NCBI
RefSeq Acc Id: NM_001418815   ⟹   NP_001405744
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,221,062 (+)NCBI
RefSeq Acc Id: NM_001418816   ⟹   NP_001405745
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,221,062 (+)NCBI
RefSeq Acc Id: NM_001418817   ⟹   NP_001405746
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,221,062 (+)NCBI
RefSeq Acc Id: NM_178377   ⟹   NP_848464
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,221,062 (+)NCBI
GRCm381846,958,876 - 47,087,995 (+)NCBI
MGSCv371847,118,530 - 47,247,649 (+)RGD
Celera1848,320,570 - 48,450,579 (+)RGD
cM Map18 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_184828
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391847,091,917 - 47,242,435 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001405720 (Get FASTA)   NCBI Sequence Viewer  
  NP_001405721 (Get FASTA)   NCBI Sequence Viewer  
  NP_001405737 (Get FASTA)   NCBI Sequence Viewer  
  NP_001405738 (Get FASTA)   NCBI Sequence Viewer  
  NP_001405739 (Get FASTA)   NCBI Sequence Viewer  
  NP_001405740 (Get FASTA)   NCBI Sequence Viewer  
  NP_001405741 (Get FASTA)   NCBI Sequence Viewer  
  NP_001405742 (Get FASTA)   NCBI Sequence Viewer  
  NP_001405743 (Get FASTA)   NCBI Sequence Viewer  
  NP_001405744 (Get FASTA)   NCBI Sequence Viewer  
  NP_001405745 (Get FASTA)   NCBI Sequence Viewer  
  NP_001405746 (Get FASTA)   NCBI Sequence Viewer  
  NP_848464 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH34879 (Get FASTA)   NCBI Sequence Viewer  
  BAC53803 (Get FASTA)   NCBI Sequence Viewer  
  BAE23954 (Get FASTA)   NCBI Sequence Viewer  
  BAE34815 (Get FASTA)   NCBI Sequence Viewer  
  BAE39108 (Get FASTA)   NCBI Sequence Viewer  
  EDL09959 (Get FASTA)   NCBI Sequence Viewer  
  EDL09960 (Get FASTA)   NCBI Sequence Viewer  
  EDL09961 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000041650
  ENSMUSP00000041650.8
  ENSMUSP00000156998.2
  ENSMUSP00000157146
  ENSMUSP00000157146.2
  ENSMUSP00000157148
  ENSMUSP00000157148.2
  ENSMUSP00000157272
  ENSMUSP00000157272.2
  ENSMUSP00000157292
  ENSMUSP00000157292.2
  ENSMUSP00000157358
  ENSMUSP00000157358.2
GenBank Protein Q8JZY2 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_848464   ⟸   NM_178377
- Peptide Label: isoform 1
- UniProtKB: Q8JZY2 (UniProtKB/Swiss-Prot),   Q3TKN7 (UniProtKB/TrEMBL),   Q3UTM6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000041650   ⟸   ENSMUST00000049388
Ensembl Acc Id: ENSMUSP00000157272   ⟸   ENSMUST00000234701
Ensembl Acc Id: ENSMUSP00000156998   ⟸   ENSMUST00000234944
Ensembl Acc Id: ENSMUSP00000157148   ⟸   ENSMUST00000234961
Ensembl Acc Id: ENSMUSP00000157358   ⟸   ENSMUST00000234280
Ensembl Acc Id: ENSMUSP00000157146   ⟸   ENSMUST00000234085
Ensembl Acc Id: ENSMUSP00000157292   ⟸   ENSMUST00000234124
RefSeq Acc Id: NP_001405746   ⟸   NM_001418817
- Peptide Label: isoform 12
RefSeq Acc Id: NP_001405720   ⟸   NM_001418791
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001405740   ⟸   NM_001418811
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001405745   ⟸   NM_001418816
- Peptide Label: isoform 12
RefSeq Acc Id: NP_001405721   ⟸   NM_001418792
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001405742   ⟸   NM_001418813
- Peptide Label: isoform 9
- UniProtKB: A0A3Q4EII3 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001405739   ⟸   NM_001418810
- Peptide Label: isoform 6
- UniProtKB: A0A3Q4EC50 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001405741   ⟸   NM_001418812
- Peptide Label: isoform 8
RefSeq Acc Id: NP_001405744   ⟸   NM_001418815
- Peptide Label: isoform 11
- UniProtKB: A0A3Q4EGT0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001405737   ⟸   NM_001418808
- Peptide Label: isoform 4
- UniProtKB: A0A3Q4EHW7 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001405743   ⟸   NM_001418814
- Peptide Label: isoform 10
RefSeq Acc Id: NP_001405738   ⟸   NM_001418809
- Peptide Label: isoform 5
Protein Domains
COMM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8JZY2-F1-model_v2 AlphaFold Q8JZY2 1-202 view protein structure

Promoters
RGD ID:13677760
Promoter ID:EPDNEW_M23030
Type:multiple initiation site
Name:Commd10_1
Description:Mus musculus COMM domain containing 10 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381846,958,861 - 46,958,921EPDNEW
RGD ID:6829151
Promoter ID:MM_KWN:25234
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000049388,   ENSMUST00000097579
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361847,118,261 - 47,118,761 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1916706 AgrOrtholog
Ensembl Genes ENSMUSG00000042705 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000049388 ENTREZGENE
  ENSMUST00000049388.9 UniProtKB/Swiss-Prot
  ENSMUST00000234085 ENTREZGENE
  ENSMUST00000234085.2 UniProtKB/TrEMBL
  ENSMUST00000234124 ENTREZGENE
  ENSMUST00000234124.2 UniProtKB/TrEMBL
  ENSMUST00000234280 ENTREZGENE
  ENSMUST00000234280.2 UniProtKB/TrEMBL
  ENSMUST00000234701 ENTREZGENE
  ENSMUST00000234701.2 UniProtKB/TrEMBL
  ENSMUST00000234944.2 UniProtKB/TrEMBL
  ENSMUST00000234961 ENTREZGENE
  ENSMUST00000234961.2 UniProtKB/TrEMBL
InterPro COMM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  COMMD10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:69456 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1916706 ENTREZGENE
NCBI Gene 69456 ENTREZGENE
PANTHER COMM DOMAIN-CONTAINING PROTEIN 10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12333 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam COMM_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  COMM_HN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Commd10 PhenoGen
PROSITE COMM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A3Q4EC50 ENTREZGENE, UniProtKB/TrEMBL
  A0A3Q4EGT0 ENTREZGENE, UniProtKB/TrEMBL
  A0A3Q4EHG2_MOUSE UniProtKB/TrEMBL
  A0A3Q4EHW7 ENTREZGENE, UniProtKB/TrEMBL
  A0A3Q4EII3 ENTREZGENE, UniProtKB/TrEMBL
  COMDA_MOUSE UniProtKB/Swiss-Prot
  Q3TKN7 ENTREZGENE, UniProtKB/TrEMBL
  Q3UTM6 ENTREZGENE, UniProtKB/TrEMBL
  Q8JZY2 ENTREZGENE