Commd10 (COMM domain containing 10)

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes Community Projects (beta) QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

Gene: Commd10 (COMM domain containing 10) Mus musculus

Analyze

Symbol:

Commd10

Name:

COMM domain containing 10

RGD ID:

1332145

MGI Page

MGI

Description:

Predicted to be located in nucleoplasm. Orthologous to human COMMD10 (COMM domain containing 10).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

2310003A05Rik; AU019438; COMM domain-containing protein 10; down-regulated in W/WV mouse stomach 2; DRWM; DRWMS2; mDRWMS2; Tg(Vav1-cre)1Kio; Tg(Vav1-cre)A2Kio; Tg(Vav1-icre)A2Kio; Vav-cre; Vav-iCre; Vav1-Cre; VavCre

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	COMMD10 (COMM domain containing 10)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Commd10 (COMM domain containing 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Commd10 (COMM domain containing 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	COMMD10 (COMM domain containing 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	COMMD10 (COMM domain containing 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Commd10 (COMM domain containing 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	COMMD10 (COMM domain containing 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	COMMD10 (COMM domain containing 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Commd10 (COMM domain containing 10)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Commd10 (COMM domain containing 10)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	COMMD10 (COMM domain containing 10)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	commd10 (COMM domain containing 10)	Alliance	DIOPT (ZFIN)
Drosophila melanogaster (fruit fly):	Vlet	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	commd10	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	47,091,917 - 47,242,435 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	47,091,883 - 47,367,351 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	46,958,819 - 47,087,995 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	46,958,816 - 47,234,284 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	47,118,530 - 47,247,649 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	47,084,207 - 47,213,326 (+)	NCBI		MGSCv36	mm8
Celera	18	48,320,570 - 48,450,579 (+)	NCBI		Celera
Cytogenetic Map	18	C	NCBI
cM Map	18	24.9	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

familial adenomatous polyposis 1 (ISO)

genetic disease (ISO)

Hereditary Neoplastic Syndromes (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,2-dimethylhydrazine (EXP)

17alpha-ethynylestradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4-hydroxyphenyl retinamide (EXP)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (ISO)

aflatoxin B1 (EXP,ISO)

aflatoxin M1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[a]pyrene diol epoxide I (ISO)

bis(2-chloroethyl) sulfide (ISO)

bisphenol A (ISO)

carbon nanotube (EXP)

chlorpyrifos (EXP)

cisplatin (ISO)

copper(II) chloride (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

dibutyl phthalate (ISO)

dicrotophos (ISO)

ethyl methanesulfonate (ISO)

finasteride (ISO)

flutamide (ISO)

folic acid (EXP)

formaldehyde (ISO)

furan (ISO)

gentamycin (ISO)

indometacin (ISO)

methimazole (ISO)

methoxychlor (ISO)

methyl methanesulfonate (ISO)

O-methyleugenol (ISO)

ochratoxin A (ISO)

oxaliplatin (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (EXP)

phenobarbital (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

quercetin (ISO)

resveratrol (ISO)

sulfadimethoxine (ISO)

tetrachloromethane (EXP)

topotecan (ISO)

trichloroethene (ISO)

valproic acid (EXP,ISO)

zinc sulfate (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

Cellular Component

cytoplasm (IEA)

nucleoplasm (ISO)

nucleus (IEA)

Molecular Function

molecular_function (ND)

protein binding (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal acute inflammation (IAGP)

abnormal B cell differentiation (IAGP)

abnormal blinking (IAGP)

abnormal blood coagulation (IAGP)

abnormal blood vessel morphology (IAGP)

abnormal bone marrow cell morphology/development (IAGP)

abnormal bone marrow cell physiology (IAGP)

abnormal bone marrow morphology (IAGP)

abnormal calcium ion homeostasis (IAGP)

abnormal CD4-positive, alpha beta T cell morphology (IAGP)

abnormal CD4-positive, alpha-beta T cell physiology (IAGP)

abnormal CD8-positive, alpha-beta cytotoxic T cell morphology (IAGP)

abnormal cell cycle (IAGP)

abnormal cell differentiation (IAGP)

abnormal cell physiology (IAGP)

abnormal circulating interleukin level (IAGP)

abnormal class switch recombination (IAGP)

abnormal common lymphocyte progenitor cell morphology (IAGP)

abnormal common myeloid progenitor cell morphology (IAGP)

abnormal cytokine level (IAGP)

abnormal definitive hematopoiesis (IAGP)

abnormal effector T cell morphology (IAGP)

abnormal erythrocyte ion transport (IAGP)

abnormal erythrocyte morphology (IAGP)

abnormal erythrocyte physiology (IAGP)

abnormal erythropoiesis (IAGP)

abnormal germinal center B cell physiology (IAGP)

abnormal granulocyte differentiation (IAGP)

abnormal gut-associated lymphoid tissue morphology (IAGP)

abnormal hematopoietic stem cell morphology (IAGP)

abnormal hematopoietic stem cell physiology (IAGP)

abnormal hematopoietic system morphology/development (IAGP)

abnormal hematopoietic system physiology (IAGP)

abnormal hemopoiesis (IAGP)

abnormal immune system cell morphology (IAGP)

abnormal immune system morphology (IAGP)

abnormal immune system organ morphology (IAGP)

abnormal immunoglobulin heavy chain V(D)J recombination (IAGP)

abnormal interleukin secretion (IAGP)

abnormal iron homeostasis (IAGP)

abnormal leukocyte morphology (IAGP)

abnormal liver morphology (IAGP)

abnormal lymphatic vessel morphology (IAGP)

abnormal lymphocyte physiology (IAGP)

abnormal lymphopoiesis (IAGP)

abnormal mast cell differentiation (IAGP)

abnormal megakaryocyte differentiation (IAGP)

abnormal megakaryocyte progenitor cell morphology (IAGP)

abnormal mononuclear cell morphology (IAGP)

abnormal myelopoiesis (IAGP)

abnormal neutrophil morphology (IAGP)

abnormal neutrophil physiology (IAGP)

abnormal NK cell differentiation (IAGP)

abnormal NK cell morphology (IAGP)

abnormal NK cell physiology (IAGP)

abnormal placenta morphology (IAGP)

abnormal proerythroblast morphology (IAGP)

abnormal renal glomerulus morphology (IAGP)

abnormal spleen B cell follicle morphology (IAGP)

abnormal spleen morphology (IAGP)

abnormal spleen periarteriolar lymphoid sheath morphology (IAGP)

abnormal spleen white pulp morphology (IAGP)

abnormal splenic cell ratio (IAGP)

abnormal stress erythropoiesis (IAGP)

abnormal thrombosis (IAGP)

abnormal thymus morphology (IAGP)

abnormal trophoblast layer morphology (IAGP)

absent regulatory T cells (IAGP)

absent spleen germinal center (IAGP)

anemia (IAGP)

arrested T cell differentiation (IAGP)

decreased alpha-beta T cell number (IAGP)

decreased B cell number (IAGP)

decreased blood osmolality (IAGP)

decreased body size (IAGP)

decreased bone marrow cell number (IAGP)

decreased CD4-positive, alpha-beta T cell number (IAGP)

decreased CD8-positive, alpha-beta T cell number (IAGP)

decreased circulating factor VIII level (IAGP)

decreased circulating haptoglobin level (IAGP)

decreased circulating interferon-alpha level (IAGP)

decreased common lymphocyte progenitor cell number (IAGP)

decreased common myeloid progenitor cell number (IAGP)

decreased dendritic cell number (IAGP)

decreased DN1 thymic pro-T cell number (IAGP)

decreased DN2 thymocyte number (IAGP)

decreased DN3 thymocyte number (IAGP)

decreased double-negative T cell number (IAGP)

decreased double-positive T cell number (IAGP)

decreased erythroblast number (IAGP)

decreased erythrocyte cell number (IAGP)

decreased erythroid progenitor cell number (IAGP)

decreased gamma-delta T cell number (IAGP)

decreased granulocyte monocyte progenitor cell number (IAGP)

decreased hematocrit (IAGP)

decreased hematopoietic cell number (IAGP)

decreased hematopoietic stem cell number (IAGP)

decreased hemoglobin content (IAGP)

decreased IgA level (IAGP)

decreased IgD level (IAGP)

decreased IgG1 level (IAGP)

decreased IgG3 level (IAGP)

decreased IgM level (IAGP)

decreased immature B cell number (IAGP)

decreased inflammatory response (IAGP)

decreased interferon-gamma secretion (IAGP)

decreased interleukin-10 secretion (IAGP)

decreased interleukin-12 secretion (IAGP)

decreased interleukin-12b secretion (IAGP)

decreased interleukin-5 secretion (IAGP)

decreased interleukin-6 secretion (IAGP)

decreased leukocyte cell number (IAGP)

decreased lymphocyte cell number (IAGP)

decreased macrophage cell number (IAGP)

decreased mature NK cell number (IAGP)

decreased mean corpuscular hemoglobin (IAGP)

decreased mean corpuscular hemoglobin concentration (IAGP)

decreased mean corpuscular volume (IAGP)

decreased myeloid cell number (IAGP)

decreased neutrophil cell number (IAGP)

decreased NK cell number (IAGP)

decreased Peyer's patch number (IAGP)

decreased physiological sensitivity to xenobiotic (IAGP)

decreased plasmacytoid dendritic cell number (IAGP)

decreased pre-B cell number (IAGP)

decreased pro-B cell number (IAGP)

decreased salivation (IAGP)

decreased spleen red pulp amount (IAGP)

decreased spleen weight (IAGP)

decreased spleen white pulp amount (IAGP)

decreased susceptibility to Herpesvirales infection (IAGP)

decreased T cell number (IAGP)

decreased thymocyte number (IAGP)

decreased transitional stage T2 B cell number (IAGP)

decreased tumor growth/size (IAGP)

decreased tumor latency (IAGP)

decreased tumor necrosis factor secretion (IAGP)

edema (IAGP)

enlarged axillary lymph nodes (IAGP)

enlarged inguinal lymph nodes (IAGP)

enlarged liver (IAGP)

enlarged spleen (IAGP)

extramedullary hematopoiesis (IAGP)

hemolytic anemia (IAGP)

hepatic necrosis (IAGP)

hypochromic microcytic anemia (IAGP)

impaired natural killer cell mediated cytotoxicity (IAGP)

impaired neutrophil chemotaxis (IAGP)

impaired neutrophil recruitment (IAGP)

increased anti-nuclear antigen antibody level (IAGP)

increased autoantibody level (IAGP)

increased B cell number (IAGP)

increased bone marrow cell number (IAGP)

increased circulating alanine transaminase level (IAGP)

increased circulating erythropoietin level (IAGP)

increased common lymphocyte progenitor cell number (IAGP)

increased eosinophil cell number (IAGP)

increased erythroblast number (IAGP)

increased erythrocyte cell number (IAGP)

increased erythrocyte osmotic fragility (IAGP)

increased erythroid progenitor cell number (IAGP)

increased granulocyte monocyte progenitor cell number (IAGP)

increased granulocyte number (IAGP)

increased heart rate (IAGP)

increased hematocrit (IAGP)

increased hematopoietic cell number (IAGP)

increased hematopoietic stem cell number (IAGP)

increased hemoglobin content (IAGP)

increased IgG1 level (IAGP)

increased IgG2b level (IAGP)

increased IgM level (IAGP)

increased immature NK cell number (IAGP)

increased incidence of induced tumors (IAGP)

increased leukocyte cell number (IAGP)

increased lymphocyte cell number (IAGP)

increased macrophage cell number (IAGP)

increased mean corpuscular hemoglobin (IAGP)

increased mean corpuscular volume (IAGP)

increased megakaryocyte cell number (IAGP)

increased megakaryocyte progenitor cell number (IAGP)

increased megakaryocyte-erythroid progenitor cell number (IAGP)

increased metastatic potential (IAGP)

increased monocyte cell number (IAGP)

increased myeloid cell number (IAGP)

increased neutrophil cell number (IAGP)

increased NK T cell number (IAGP)

increased physiological sensitivity to xenobiotic (IAGP)

increased red blood cell distribution width (IAGP)

increased regulatory T cell number (IAGP)

increased spleen weight (IAGP)

increased splenocyte number (IAGP)

increased susceptibility to autoimmune disorder (IAGP)

increased susceptibility to bacterial infection (IAGP)

increased susceptibility to bacterial infection induced morbidity/mortality (IAGP)

increased susceptibility to Coronaviridae infection (IAGP)

increased susceptibility to Coronaviridae infection induced morbidity/mortality (IAGP)

increased susceptibility to fungal infection (IAGP)

increased susceptibility to induced morbidity/mortality (IAGP)

increased susceptibility to xenobiotic induced morbidity/mortality (IAGP)

increased T cell apoptosis (IAGP)

increased T cell number (IAGP)

increased urine protein level (IAGP)

intermingled spleen red and white pulp (IAGP)

kidney inflammation (IAGP)

lethality throughout fetal growth and development, complete penetrance (IAGP)

limb paralysis (IAGP)

macrocytosis (IAGP)

microcytic anemia (IAGP)

myelofibrosis (IAGP)

neonatal lethality (IAGP)

no abnormal phenotype detected (IAGP)

pale kidney (IAGP)

pale liver (IAGP)

pallor (IAGP)

pancreas inflammation (IAGP)

polycythemia (IAGP)

postnatal lethality, incomplete penetrance (IAGP)

premature death (IAGP)

prenatal lethality, complete penetrance (IAGP)

preweaning lethality, complete penetrance (IEA)

preweaning lethality, incomplete penetrance (IAGP)

reticulocytosis (IAGP)

salivary gland degeneration (IAGP)

salivary gland inflammation (IAGP)

small spleen (IAGP)

small thymus (IAGP)

spherocytosis (IAGP)

spleen fibrosis (IAGP)

spleen hyperplasia (IAGP)

tachypnea (IAGP)

thrombocytopenia (IAGP)

thrombocytosis (IAGP)

thymus atrophy (IAGP)

thymus hypoplasia (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development.	Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3.	Electronic Transfer of Homolog Data	MGD and Homologene mouse data transfer
4.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Database resources of the National Center for Biotechnology Information.	Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10477714	PMID:10922068	PMID:11042159	PMID:11076861	PMID:12477932	PMID:12520002	PMID:12548562	PMID:14610273	PMID:15065000	PMID:15489334
PMID:15782199	PMID:16141072	PMID:16141073	PMID:16546096	PMID:17638848	PMID:17694047	PMID:18068630	PMID:18160670	PMID:18371367	PMID:18538592	PMID:18550710	PMID:18656388
PMID:18676810	PMID:18805964	PMID:19109233	PMID:19169242	PMID:19247966	PMID:19321776	PMID:19345119	PMID:19797524	PMID:20080761	PMID:20154226	PMID:20360386	PMID:20371744
PMID:20427763	PMID:20585934	PMID:20601952	PMID:20639863	PMID:21130157	PMID:21148330	PMID:21167753	PMID:21187410	PMID:21258009	PMID:21267068	PMID:21339326	PMID:21385828
PMID:21572028	PMID:21603616	PMID:21670475	PMID:21677750	PMID:21737689	PMID:21828136	PMID:21844204	PMID:21865342	PMID:21880987	PMID:21972416	PMID:21998456	PMID:22186994
PMID:22275380	PMID:22281595	PMID:22422825	PMID:22430489	PMID:22452982	PMID:22453236	PMID:22473956	PMID:22623356	PMID:22659386	PMID:22763442	PMID:22810304	PMID:22863835
PMID:22908325	PMID:22958933	PMID:23103132	PMID:23188081	PMID:23213261	PMID:23219873	PMID:23263556	PMID:23264594	PMID:23293022	PMID:23293354	PMID:23300832	PMID:23326559
PMID:23345330	PMID:23377280	PMID:23415223	PMID:23434755	PMID:23434825	PMID:23463102	PMID:23499491	PMID:23502961	PMID:23543053	PMID:23670180	PMID:23684610	PMID:23684985
PMID:23708969	PMID:23727242	PMID:23770640	PMID:23795291	PMID:23894152	PMID:23913046	PMID:23958952	PMID:23979601	PMID:24030045	PMID:24048899	PMID:24121508	PMID:24204913
PMID:24209759	PMID:24446236	PMID:24451543	PMID:24465765	PMID:24487275	PMID:24494196	PMID:24509509	PMID:24553180	PMID:24567373	PMID:24591644	PMID:24606906	PMID:24631153
PMID:24670648	PMID:24677539	PMID:24705491	PMID:24714492	PMID:24786772	PMID:24788518	PMID:24820309	PMID:24857755	PMID:24893313	PMID:24894949	PMID:24895007	PMID:24911523
PMID:25020912	PMID:25057009	PMID:25079320	PMID:25129145	PMID:25139355	PMID:25201874	PMID:25234167	PMID:25246544	PMID:25263125	PMID:25308957	PMID:25323585	PMID:25412626
PMID:25417109	PMID:25436971	PMID:25461254	PMID:25516969	PMID:25552701	PMID:25562324	PMID:25573994	PMID:25583527	PMID:25591498	PMID:25611385	PMID:25624444	PMID:25624445
PMID:25732600	PMID:25737499	PMID:25772358	PMID:25787118	PMID:25801035	PMID:25831528	PMID:25847946	PMID:25884630	PMID:25903647	PMID:25915733	PMID:25965571	PMID:25968920
PMID:25992544	PMID:25992862	PMID:26001274	PMID:26089398	PMID:26108693	PMID:26124281	PMID:26147683	PMID:26173741	PMID:26205492	PMID:26219591	PMID:26232433	PMID:26401001
PMID:26414765	PMID:26414766	PMID:26522985	PMID:26571395	PMID:26595813	PMID:26642852	PMID:26667169	PMID:26668377	PMID:26680207	PMID:26682986	PMID:26692072	PMID:26749442
PMID:26787889	PMID:26789249	PMID:26795246	PMID:26847029	PMID:26850790	PMID:26851218	PMID:26876172	PMID:26937964	PMID:26982726	PMID:27059842	PMID:27060169	PMID:27076080
PMID:27163399	PMID:27183626	PMID:27207790	PMID:27225119	PMID:27271479	PMID:27287239	PMID:27297878	PMID:27304073	PMID:27312418	PMID:27320916	PMID:27417580	PMID:27424808
PMID:27449297	PMID:27500495	PMID:27504807	PMID:27581360	PMID:27601261	PMID:27622329	PMID:27695000	PMID:27783956	PMID:27806947	PMID:27810912	PMID:27827827	PMID:27872905
PMID:27879203	PMID:27881824	PMID:27929373	PMID:27939640	PMID:27951586	PMID:27956603	PMID:27956631	PMID:28005008	PMID:28114589	PMID:28182011	PMID:28202494	PMID:28280037
PMID:28290449	PMID:28319097	PMID:28329690	PMID:28330582	PMID:28341702	PMID:28381565	PMID:28436956	PMID:28504697	PMID:28504706	PMID:28533268	PMID:28576770	PMID:28577909
PMID:28634350	PMID:28636844	PMID:28642279	PMID:28646160	PMID:28671690	PMID:28674188	PMID:28714970	PMID:28724541	PMID:28805812	PMID:28826859	PMID:28839100	PMID:28844837
PMID:28855737	PMID:28860338	PMID:28916263	PMID:28951422	PMID:28975680	PMID:29126797	PMID:29127143	PMID:29138493	PMID:29183988	PMID:29193031	PMID:29202466	PMID:29222418
PMID:29229781	PMID:29249691	PMID:29269852	PMID:29282250	PMID:29292386	PMID:29320732	PMID:29323295	PMID:29345390	PMID:29351846	PMID:29361554	PMID:29379138	PMID:29382756
PMID:29386112	PMID:29388727	PMID:29429943	PMID:29453398	PMID:29462197	PMID:29519941	PMID:29539633	PMID:29576450	PMID:29632143	PMID:29643185	PMID:29643232	PMID:29704636
PMID:29768197	PMID:29769727	PMID:29785025	PMID:29804890	PMID:29878897	PMID:29894694	PMID:29904050	PMID:29967452	PMID:29972776	PMID:30037215	PMID:30038282	PMID:30049881
PMID:30068598	PMID:30076146	PMID:30107174	PMID:30150673	PMID:30184499	PMID:30208327	PMID:30237863	PMID:30250136	PMID:30271915	PMID:30314756	PMID:30374131	PMID:30388136
PMID:30423293	PMID:30425986	PMID:30446384	PMID:30451838	PMID:30463008	PMID:30475900	PMID:30487795	PMID:30553776	PMID:30566244	PMID:30567843	PMID:30635284	PMID:30659012
PMID:30673615	PMID:30683698	PMID:30770250	PMID:30772497	PMID:30787448	PMID:30810242	PMID:30819915	PMID:30842549	PMID:30858552	PMID:30897162	PMID:30910863	PMID:30917958
PMID:30952670	PMID:30959277	PMID:30962294	PMID:30967512	PMID:30973865	PMID:30991025	PMID:31031138	PMID:31031188	PMID:31068365	PMID:31118412	PMID:31134061	PMID:31139183
PMID:31140976	PMID:31151988	PMID:31167772	PMID:31292217	PMID:31320508	PMID:31356168	PMID:31378673	PMID:31379128	PMID:31391476	PMID:31406377	PMID:31406378	PMID:31434684
PMID:31434702	PMID:31451639	PMID:31467334	PMID:31477755	PMID:31481522	PMID:31530563	PMID:31534216	PMID:31619554	PMID:31679686	PMID:31699777	PMID:31729420	PMID:31761723
PMID:31908356	PMID:31980536	PMID:32025719	PMID:32045471	PMID:32049013	PMID:32075733	PMID:32096759	PMID:32111837	PMID:32129527	PMID:32130894	PMID:32142677	PMID:32176686
PMID:32192357	PMID:32229537	PMID:32246014	PMID:32259484	PMID:32265924	PMID:32286311	PMID:32321925	PMID:32325033	PMID:32398640	PMID:32428860	PMID:32442405	PMID:32497523
PMID:32515223	PMID:32576838	PMID:32671208	PMID:32704094	PMID:32807943	PMID:32929002	PMID:32930709	PMID:32951306	PMID:32956421	PMID:32958856	PMID:33027668	PMID:33036023
PMID:33103089	PMID:33150381	PMID:33224133	PMID:33346030	PMID:33362210	PMID:33370780	PMID:33397967	PMID:33426789	PMID:33442062	PMID:33462315	PMID:33507234	PMID:33596429
PMID:33596533	PMID:33600797	PMID:33637617	PMID:33705489	PMID:33743191	PMID:33753942	PMID:33765133	PMID:33837181	PMID:33859647	PMID:33931647	PMID:34015056	PMID:34077737
PMID:34108937	PMID:34122445	PMID:34124040	PMID:34240701	PMID:34242617	PMID:34321607	PMID:34370827	PMID:34375613	PMID:34381449	PMID:34386488	PMID:34406363	PMID:34421919
PMID:34431978	PMID:34450065	PMID:34506849	PMID:34546980	PMID:34576286	PMID:34611611	PMID:34678045	PMID:34732767	PMID:34788631	PMID:34808021	PMID:34811541	PMID:34818550
PMID:34855941	PMID:34857757	PMID:34879240	PMID:34895467	PMID:34919144	PMID:34963058	PMID:34965439	PMID:34974065	PMID:35021072	PMID:35022500	PMID:35031770	PMID:35045331
PMID:35074867	PMID:35087060	PMID:35091558	PMID:35101526	PMID:35133065	PMID:35172136	PMID:35210567	PMID:35288551	PMID:35303436	PMID:35343899	PMID:35365653	PMID:35399538
PMID:35418614	PMID:35432339	PMID:35444273	PMID:35451955	PMID:35508166	PMID:35603175	PMID:35603697	PMID:35703178	PMID:35704993	PMID:35729193	PMID:35732734	PMID:35747128
PMID:35815807	PMID:35857476	PMID:35864246	PMID:35961320	PMID:35987460	PMID:36062803	PMID:36074090	PMID:36104564	PMID:36138028	PMID:36167470	PMID:36185806	PMID:36214220
PMID:36250465	PMID:36395068	PMID:36451830	PMID:36490327	PMID:36528691	PMID:36807138	PMID:36862552	PMID:36976102	PMID:37018401	PMID:37045808	PMID:37081886	PMID:37138018
PMID:37160922	PMID:37200093	PMID:37337907	PMID:37353528	PMID:37540600	PMID:37703370	PMID:37723209	PMID:37742191

Genomics

Comparative Map Data

Commd10
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	47,091,917 - 47,242,435 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	47,091,883 - 47,367,351 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	46,958,819 - 47,087,995 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	46,958,816 - 47,234,284 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	47,118,530 - 47,247,649 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	47,084,207 - 47,213,326 (+)	NCBI		MGSCv36	mm8
Celera	18	48,320,570 - 48,450,579 (+)	NCBI		Celera
Cytogenetic Map	18	C	NCBI
cM Map	18	24.9	NCBI

COMMD10
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	116,085,025 - 116,293,287 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	116,085,016 - 116,412,762 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	115,420,722 - 115,628,984 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	115,448,626 - 115,656,880 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	115,448,625 - 115,656,877	NCBI
Celera	5	111,369,127 - 111,578,514 (+)	NCBI		Celera
Cytogenetic Map	5	q23.1	NCBI
HuRef	5	110,601,462 - 110,809,519 (+)	NCBI		HuRef
CHM1_1	5	114,853,501 - 115,061,550 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	116,597,411 - 116,805,723 (+)	NCBI		T2T-CHM13v2.0

Commd10
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	18	39,741,219 - 39,874,801 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	39,741,298 - 39,874,903 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	41,774,508 - 41,907,990 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	42,476,755 - 42,610,256 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	40,269,855 - 40,403,350 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	41,022,487 - 41,158,374 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	41,022,552 - 41,154,932 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	40,666,615 - 40,798,878 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	41,226,869 - 41,362,841 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	41,264,409 - 41,400,381 (+)	NCBI
Celera	18	37,992,809 - 38,125,779 (+)	NCBI		Celera
Cytogenetic Map	18	q11	NCBI

Commd10
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955408	35,887,802 - 36,043,835 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955408	35,887,995 - 36,045,085 (+)	NCBI	ChiLan1.0	ChiLan1.0

COMMD10
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	5	109,482,867 - 109,687,058 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	111,439,100 - 111,642,742 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	117,236,606 - 117,438,866 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	117,236,804 - 117,438,068 (+)	Ensembl	panpan1.1		panPan2

COMMD10
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	5,800,880 - 5,985,775 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	5,800,928 - 5,984,924 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	5,951,513 - 6,136,406 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	5,792,736 - 5,977,761 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	5,792,791 - 5,979,955 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	5,741,476 - 5,926,343 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	5,819,121 - 6,004,160 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	6,070,827 - 6,255,975 (+)	NCBI		UU_Cfam_GSD_1.0

Commd10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	128,566,476 - 128,770,756 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936742	1,267,282 - 1,475,072 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936742	1,267,334 - 1,471,521 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

COMMD10
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	120,238,614 - 120,445,021 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	120,238,543 - 120,444,409 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	125,144,480 - 125,375,337 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

COMMD10
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	19,373,892 - 19,601,508 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	19,373,864 - 19,448,138 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	58,803,263 - 59,033,962 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Commd10
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624733	5,561,391 - 5,751,334 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624733	5,563,258 - 5,751,340 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Commd10
5148 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	237
Count of miRNA genes:	208
Interacting mature miRNAs:	219
Transcripts:	ENSMUST00000049388
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
27226723	Tibw9_m	tibia width 9, proximal, 16 week (mouse)					18	3200000	60933072	Mouse
1558849	W3q15_m	weight 3 weeks QTL 15 (mouse)			Not determined		18	5041119	61272643	Mouse
13504732	Cath6_m	carotid atherosclerosis 6 (mouse)					18	13637126	47637126	Mouse
1357603	Mom3_m	modifier of Min 3 (mouse)			Not determined		18	14030023	67098962	Mouse
1300994	Pvcan3_m	protection against vaginal candidiasis 3 (mouse)			Not determined		18	16199640	50199776	Mouse
1301307	Phospq1_m	phospholipid QTL 1 (mouse)			Not determined		18	18139704	52139859	Mouse
1300638	Im7_m	immunoregulatory 7 (mouse)			Not determined		18	19018874	53018992	Mouse
1558743	Kcal1_m	kilocalorie 1 (mouse)			Not determined		18	19018874	53018992	Mouse
11532709	Sluc41_m	susceptibility to lung cancer 41 (mouse)					18	20953694	57590708	Mouse
13463476	Hctq8_m	hematocrit QTL 8 (mouse)					18	21217580	55217727	Mouse
1300877	Adip8_m	adiposity 8 (mouse)			Not determined		18	22619914	56620127	Mouse
11532710	Sluc41a_m	susceptibility to lung cancer 41a (mouse)					18	22619914	56620127	Mouse
11532715	Sluc41b_m	susceptibility to lung cancer 41b (mouse)					18	22619914	56620127	Mouse
11532716	Sluc41c_m	susceptibility to lung cancer 41c (mouse)					18	22619914	56620127	Mouse
1301570	Sluc14_m	susceptibility to lung cancer 14 (mouse)			Not determined		18	22619914	56620127	Mouse
4142031	Moen1_m	modifier of engrailed QTL 1 (mouse)			Not determined		18	24115560	58115730	Mouse
25823173	Hrsq12_m	host response to SARS QTL 12, hemorrhage (mouse)					18	24895881	78339555	Mouse
12904950	Smmq3_m	soleus muscle mass QTL 3 (mouse)					18	26056875	60056875	Mouse
25823167	Hrsq5_m	host response to SARS QTL 5, D3% weight (mouse)					18	27241115	58827077	Mouse
25823171	Hrsq10_m	host response to SARS QTL 10, D4% weight (mouse)					18	27241115	58827077	Mouse
25823174	Hrsq11_m	host response to SARS QTL 11, log titer (mouse)					18	27241115	58827077	Mouse
1301400	Lmr13_m	leishmaniasis resistance 13 (mouse)			Not determined		18	28109380	62109518	Mouse
4141857	Mhysq5_m	male hybrid sterility QTL 5 (mouse)			Not determined			28130604	62130739	Mouse
1302163	Bmd16_m	bone mineral density 16 (mouse)			Not determined		18	29667914	63668060	Mouse
12880412	V125Dq12_m	vitamin D active form serum level QTL 12 (mouse)					18	30233067	64233067	Mouse
1300685	Scc5_m	colon tumor susceptibility 5 (mouse)			Not determined		18	31988480	65988629	Mouse
1357690	Vtbt19_m	vertebral trabecular bone trait 19 (mouse)			Not determined		18	33091043	67091221	Mouse
1301771	Pcyts6_m	plasmacytoma susceptibility 6 (mouse)			Not determined		18	35658632	69658851	Mouse
4142366	Chlq10_m	circulating hormone level QTL 10 (mouse)			Not determined		18	36291022	70291180	Mouse
15039381	Ltgq8_m	liver triglyceride QTL 8 (mouse)					18	38206569	72206569	Mouse
15039383	Mvlq5_m	microvesicular liver lesion QTL 5 (mouse)					18	38206569	72206569	Mouse
15039384	Liviq1_m	liver inflammation QTL 1 (mouse)					18	38206569	72206569	Mouse
15039386	Mvlq4_m	macrovesicular liver lesion QTL 4 (mouse)					18	38206569	72206569	Mouse
12050070	Nabq2_m	nasal bone morphology QTL 2 (mouse)					18	39103677	73103793	Mouse
1357639	Obsty4_m	obesity 4 (mouse)			Not determined		18	39619914	84638778	Mouse
1301902	Hrtfm4_m	heart failure modifier 4 (mouse)			Not determined		18	43311120	77311343	Mouse
1301215	Thcr_m	T helper cell response (mouse)			Not determined		18	45130604	68778777	Mouse
12904745	Carcdq2_m	cardiac collagen deposition QTL 2 (mouse)					18	46423287	80423287	Mouse
10412184	Sstapa1_m	Suseptibility to Staphylococus aureus infection 1 (mouse)			Not determined		18	46541546	57590708	Mouse
11039493	Ltpr8d_m	Leishmania tropica response 8d (mouse)					18	46874903	80875042	Mouse
11039494	Ltpr8b_m	Leishmania tropica response 8b (mouse)					18	46874903	80875042	Mouse

Markers in Region

RH136393

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	18	47,087,545 - 47,087,744	UniSTS	GRCm38
MGSCv37	18	47,247,199 - 47,247,398	UniSTS	GRCm37
Celera	18	48,450,129 - 48,450,328	UniSTS
Cytogenetic Map	18	C	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001418791	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001418792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001418808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001418809	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001418810	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001418811	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001418812	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001418813	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001418814	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001418815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001418816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001418817	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_178377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_184828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB052770	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC117239	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC132100	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK009101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK139321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK159099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK166907	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK196660	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK209950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK212963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC034879	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466528	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000049388 ⟹ ENSMUSP00000041650

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	18	47,091,883 - 47,221,062 (+)	Ensembl
GRCm38.p6 Ensembl	18	46,958,816 - 47,087,995 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000234069

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	18	47,091,921 - 47,096,315 (+)	Ensembl
GRCm38.p6 Ensembl	18	46,958,854 - 46,963,248 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000234085 ⟹ ENSMUSP00000157146

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	18	47,091,945 - 47,220,275 (+)	Ensembl
GRCm38.p6 Ensembl	18	46,958,878 - 47,087,208 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000234124 ⟹ ENSMUSP00000157292

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	18	47,091,928 - 47,367,351 (+)	Ensembl
GRCm38.p6 Ensembl	18	46,958,861 - 47,234,284 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000234280 ⟹ ENSMUSP00000157358

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	18	47,091,942 - 47,220,267 (+)	Ensembl
GRCm38.p6 Ensembl	18	46,958,875 - 47,087,200 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000234376

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	18	47,096,623 - 47,220,171 (+)	Ensembl
GRCm38.p6 Ensembl	18	46,963,556 - 47,087,104 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000234664

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	18	47,239,982 - 47,242,434 (+)	Ensembl
GRCm38.p6 Ensembl	18	47,106,915 - 47,109,367 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000234701 ⟹ ENSMUSP00000157272

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	18	47,091,947 - 47,220,155 (+)	Ensembl
GRCm38.p6 Ensembl	18	46,958,880 - 47,087,088 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000234944 ⟹ ENSMUSP00000156998

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	18	47,091,932 - 47,165,018 (+)	Ensembl
GRCm38.p6 Ensembl	18	46,958,865 - 47,031,951 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000234952

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	18	47,091,925 - 47,123,869 (+)	Ensembl
GRCm38.p6 Ensembl	18	46,958,858 - 46,990,802 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000234961 ⟹ ENSMUSP00000157148

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	18	47,091,928 - 47,168,874 (+)	Ensembl
GRCm38.p6 Ensembl	18	46,958,861 - 47,035,807 (+)	Ensembl

RefSeq Acc Id:

NM_001418791 ⟹ NP_001405720

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,221,062 (+)	NCBI

RefSeq Acc Id:

NM_001418792 ⟹ NP_001405721

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,221,062 (+)	NCBI

RefSeq Acc Id:

NM_001418808 ⟹ NP_001405737

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,171,761 (+)	NCBI

RefSeq Acc Id:

NM_001418809 ⟹ NP_001405738

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,158,247 (+)	NCBI

RefSeq Acc Id:

NM_001418810 ⟹ NP_001405739

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,221,062 (+)	NCBI

RefSeq Acc Id:

NM_001418811 ⟹ NP_001405740

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,221,062 (+)	NCBI

RefSeq Acc Id:

NM_001418812 ⟹ NP_001405741

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,221,062 (+)	NCBI

RefSeq Acc Id:

NM_001418813 ⟹ NP_001405742

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,221,062 (+)	NCBI

RefSeq Acc Id:

NM_001418814 ⟹ NP_001405743

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,171,761 (+)	NCBI

RefSeq Acc Id:

NM_001418815 ⟹ NP_001405744

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,221,062 (+)	NCBI

RefSeq Acc Id:

NM_001418816 ⟹ NP_001405745

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,221,062 (+)	NCBI

RefSeq Acc Id:

NM_001418817 ⟹ NP_001405746

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,221,062 (+)	NCBI

RefSeq Acc Id:

NM_178377 ⟹ NP_848464

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,221,062 (+)	NCBI
GRCm38	18	46,958,876 - 47,087,995 (+)	NCBI
MGSCv37	18	47,118,530 - 47,247,649 (+)	RGD
Celera	18	48,320,570 - 48,450,579 (+)	RGD
cM Map	18		ENTREZGENE

Sequence:

show sequence

GGAGCTTCAAGGATGGCGGCGTCCGCAGCGCTGATCCTGCCCGAGAGCCCCAGCATGAAGAAAG
CGGTGCCGCTGATAAATGCAATAGACACGGGGAGATTCCCACGACTTCTCAGCCGGATTCTTCA
AAAGCTCCACCTGAAGGCCGAGAGCAGTTTCAGTGAAGAAGAGGAAGAAAAACTTCAGGCTGCA
TTCTCTCTAGAGAAACAAGAACTTCACCTGGTTCTGGAGACAATATCATTTGTTTTGGAACAGG
CAGTGTATCACAACGTGAAGCCAGCAGCACTGCAGCAGCAACTAGAGATGATTCATCTTAGGAA
AGACAAAGCGGAAGCCTTTGCCAGTGCTTGGTCGGCTATGGGTCAGGAGACAGTTGAGAAGTTC
CGCCAGAGAATCCTGGGCCCTCACAAGCTAGAGACAGTGGGATGGCAGCTTAACCTGCAAATGG
CCCACTCTGCTCAAGCAAAGCTGCAGTCTCCCCAGGCCGTGCTGCAACTGGGAGTGAGCAAGGA
AGACGCCAAGAACGTGGAGAAAGTTCTCGTGGAATTCAATCACAAGGAGCTGTTCGATTTCTAC
AACAAGCTGGAGACCATACAAGCGCAGCTGGACTCCCTCACATGATGTTCTGGAAGACTGGCTT
CCTTCGCCATCACATTCCGGCCACCTCACTCTTTCGCACTGAAGAGAGACTGCCCAAGTATATT
TTCTAGAGGATTCGGTGACACTATTGCTACAGATAATATGACTTATTGCATCTTAGACAAATAG
CAGTGATGGGAGATCACAATAGGAGCACTGGGTTTCGAGTGTGCCTTCTCGCCTCACAGGAGCC
AAGAGCAATTGTTGAGAAAAACGAAAGAAGTAAGAAGTGAATGCCATGCTGTTTTTTCTTTTTT
TCTCTCTCTTTAACAATTATTTTATTAGATATTTTCTTCATTTACATTTCAATGCTATTCCAAA
AGTCTCCTATACCCTAACCCCACCCTGCTCCCCAACCCTCCCACTCCTGCTTCTTGGCTCTGAC
GTTCCCCTGTACTGGGGCATAGAAAGTTTGCAAGACCAAAGGGCCTCTGTTTTTTCTGTCAGAT
TGCTTTCAGGGATCAGGGAAGGTCTGTAGGCAGAAGGTATGATGGTGCCCTAGCAGAGTATGAA
ACCTTACTCATTACAGTAATTAATTAGGGAAGCAGCCGCAGGCCGTCAAATGTTTTGGCATTTG
TCCTGCAGTGTTCTTTTGCTTGAAGTATAGTGCAAGAAAGAAATCTAAAATGGTACCAGTACTG
CTGTGAGTTCATCCCACTGCGCTCCCCTTGACTCCCCCTGAAGGTTCCTGACGTTAATGACTTC
AAAATCATCTAGGTTTACATATATCTCTGCAGATTACTAACAGTGCACTTCTCAGTGTTTCAGA
TTGCAAATGAAAATTGACCTGTAATGAGTATGACATGGGAATCTTACATTTTCACTCGAAAACT
TTATGCATCCTCCTTTTATGGATATATGTGTTCACTGGTTTCAGTCAATAAAAATTTTCTACCT
GAGAATTATTTAAA

hide sequence

RefSeq Acc Id:

NR_184828

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	18	47,091,917 - 47,242,435 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001405720	(Get FASTA)	NCBI Sequence Viewer
	NP_001405721	(Get FASTA)	NCBI Sequence Viewer
	NP_001405737	(Get FASTA)	NCBI Sequence Viewer
	NP_001405738	(Get FASTA)	NCBI Sequence Viewer
	NP_001405739	(Get FASTA)	NCBI Sequence Viewer
	NP_001405740	(Get FASTA)	NCBI Sequence Viewer
	NP_001405741	(Get FASTA)	NCBI Sequence Viewer
	NP_001405742	(Get FASTA)	NCBI Sequence Viewer
	NP_001405743	(Get FASTA)	NCBI Sequence Viewer
	NP_001405744	(Get FASTA)	NCBI Sequence Viewer
	NP_001405745	(Get FASTA)	NCBI Sequence Viewer
	NP_001405746	(Get FASTA)	NCBI Sequence Viewer
	NP_848464	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH34879	(Get FASTA)	NCBI Sequence Viewer
	BAC53803	(Get FASTA)	NCBI Sequence Viewer
	BAE23954	(Get FASTA)	NCBI Sequence Viewer
	BAE34815	(Get FASTA)	NCBI Sequence Viewer
	BAE39108	(Get FASTA)	NCBI Sequence Viewer
	EDL09959	(Get FASTA)	NCBI Sequence Viewer
	EDL09960	(Get FASTA)	NCBI Sequence Viewer
	EDL09961	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000041650
	ENSMUSP00000156998.2
	ENSMUSP00000157146
	ENSMUSP00000157146.2
	ENSMUSP00000157148
	ENSMUSP00000157148.2
	ENSMUSP00000157272
	ENSMUSP00000157272.2
	ENSMUSP00000157292
	ENSMUSP00000157292.2
	ENSMUSP00000157358
	ENSMUSP00000157358.2
GenBank Protein	Q8JZY2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_848464 ⟸ NM_178377
- Peptide Label:	isoform 1
- UniProtKB:	Q8JZY2 (UniProtKB/Swiss-Prot), Q3TKN7 (UniProtKB/TrEMBL), Q3UTM6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAASAALILPESPSMKKAVPLINAIDTGRFPRLLSRILQKLHLKAESSFSEEEEEKLQAAFSLE KQELHLVLETISFVLEQAVYHNVKPAALQQQLEMIHLRKDKAEAFASAWSAMGQETVEKFRQRI LGPHKLETVGWQLNLQMAHSAQAKLQSPQAVLQLGVSKEDAKNVEKVLVEFNHKELFDFYNKLE TIQAQLDSLT hide sequence

RefSeq Acc Id:

ENSMUSP00000041650 ⟸ ENSMUST00000049388

RefSeq Acc Id:

ENSMUSP00000157272 ⟸ ENSMUST00000234701

RefSeq Acc Id:

ENSMUSP00000156998 ⟸ ENSMUST00000234944

RefSeq Acc Id:

ENSMUSP00000157148 ⟸ ENSMUST00000234961

RefSeq Acc Id:

ENSMUSP00000157358 ⟸ ENSMUST00000234280

RefSeq Acc Id:

ENSMUSP00000157146 ⟸ ENSMUST00000234085

RefSeq Acc Id:

ENSMUSP00000157292 ⟸ ENSMUST00000234124

RefSeq Acc Id:	NP_001405746 ⟸ NM_001418817
- Peptide Label:	isoform 12

RefSeq Acc Id:	NP_001405720 ⟸ NM_001418791
- Peptide Label:	isoform 2

RefSeq Acc Id:	NP_001405740 ⟸ NM_001418811
- Peptide Label:	isoform 7

RefSeq Acc Id:	NP_001405745 ⟸ NM_001418816
- Peptide Label:	isoform 12

RefSeq Acc Id:	NP_001405721 ⟸ NM_001418792
- Peptide Label:	isoform 3

RefSeq Acc Id:	NP_001405742 ⟸ NM_001418813
- Peptide Label:	isoform 9
- UniProtKB:	A0A3Q4EII3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001405739 ⟸ NM_001418810
- Peptide Label:	isoform 6
- UniProtKB:	A0A3Q4EC50 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001405741 ⟸ NM_001418812
- Peptide Label:	isoform 8

RefSeq Acc Id:	NP_001405744 ⟸ NM_001418815
- Peptide Label:	isoform 11
- UniProtKB:	A0A3Q4EGT0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001405737 ⟸ NM_001418808
- Peptide Label:	isoform 4
- UniProtKB:	A0A3Q4EHW7 (UniProtKB/TrEMBL), Q3UTM6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001405743 ⟸ NM_001418814
- Peptide Label:	isoform 10

RefSeq Acc Id:	NP_001405738 ⟸ NM_001418809
- Peptide Label:	isoform 5
- UniProtKB:	Q3UTM6 (UniProtKB/TrEMBL)

Protein Domains

COMM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8JZY2-F1-model_v2	AlphaFold	Q8JZY2	1-202	view protein structure

Promoters

RGD ID:

13677760

Promoter ID:

EPDNEW_M23030

Type:

multiple initiation site

Name:

Commd10_1

Description:

Mus musculus COMM domain containing 10 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	18	46,958,861 - 46,958,921	EPDNEW

RGD ID:

6829151

Promoter ID:

MM_KWN:25234

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

ENSMUST00000049388, ENSMUST00000097579

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	18	47,118,261 - 47,118,761 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1916706	AgrOrtholog
Ensembl Genes	ENSMUSG00000042705	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000049388	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000234085	ENTREZGENE
	ENSMUST00000234085.2	UniProtKB/TrEMBL
	ENSMUST00000234124	ENTREZGENE
	ENSMUST00000234124.2	UniProtKB/TrEMBL
	ENSMUST00000234280	ENTREZGENE
	ENSMUST00000234280.2	UniProtKB/TrEMBL
	ENSMUST00000234701	ENTREZGENE
	ENSMUST00000234701.2	UniProtKB/TrEMBL
	ENSMUST00000234944.2	UniProtKB/TrEMBL
	ENSMUST00000234961	ENTREZGENE
	ENSMUST00000234961.2	UniProtKB/TrEMBL
InterPro	COMM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	COMMD10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:69456	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:1916706	ENTREZGENE
NCBI Gene	69456	ENTREZGENE
PANTHER	COMM DOMAIN-CONTAINING PROTEIN 10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR12333	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	COMM_domain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Commd10	PhenoGen
PROSITE	COMM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A3Q4EC50	ENTREZGENE, UniProtKB/TrEMBL
	A0A3Q4EGT0	ENTREZGENE, UniProtKB/TrEMBL
	A0A3Q4EHG2_MOUSE	UniProtKB/TrEMBL
	A0A3Q4EHW7	ENTREZGENE, UniProtKB/TrEMBL
	A0A3Q4EII3	ENTREZGENE, UniProtKB/TrEMBL
	COMDA_MOUSE	UniProtKB/Swiss-Prot
	Q3TKN7	ENTREZGENE, UniProtKB/TrEMBL
	Q3UTM6	ENTREZGENE, UniProtKB/TrEMBL
	Q8JZY2	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar

Mammalian Phenotype