Pgam5 (phosphoglycerate mutase family member 5) - Rat Genome Database

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Gene: Pgam5 (phosphoglycerate mutase family member 5) Mus musculus
Analyze
Symbol: Pgam5
Name: phosphoglycerate mutase family member 5
RGD ID: 1323797
MGI Page MGI
Description: Predicted to enable GTPase activator activity and protein serine/threonine phosphatase activity. Involved in necroptotic process and negative regulation of cold-induced thermogenesis. Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrion. Orthologous to human PGAM5 (PGAM family member 5, mitochondrial serine/threonine protein phosphatase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2610528A17Rik; serine/threonine-protein phosphatase PGAM5, mitochondrial
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm18827  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395110,407,001 - 110,417,765 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5110,406,996 - 110,417,779 (-)EnsemblGRCm39 Ensembl
GRCm385110,259,135 - 110,269,899 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5110,259,130 - 110,269,913 (-)EnsemblGRCm38mm10GRCm38
MGSCv375110,688,154 - 110,698,918 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365110,499,457 - 110,510,184 (-)NCBIMGSCv36mm8
Celera5107,382,715 - 107,393,630 (-)NCBICelera
Cytogenetic Map5FNCBI
cM Map553.43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. The Nrf2 regulatory network provides an interface between redox and intermediary metabolism. Hayes JD and Dinkova-Kostova AT, Trends Biochem Sci. 2014 Apr;39(4):199-218. doi: 10.1016/j.tibs.2014.02.002. Epub 2014 Mar 16.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Selective removal of mitochondria via mitophagy: distinct pathways for different mitochondrial stresses. Wei H, etal., Biochim Biophys Acta. 2015 Oct;1853(10 Pt B):2784-90. doi: 10.1016/j.bbamcr.2015.03.013. Epub 2015 Apr 1.
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16944949   PMID:17967808  
PMID:18799693   PMID:21677750   PMID:21873635   PMID:22265414   PMID:25012655   PMID:25222142   PMID:26381214   PMID:26416771   PMID:26582950   PMID:26807733   PMID:27077115   PMID:27183605  
PMID:27453048   PMID:27566130   PMID:27626380   PMID:28378742   PMID:28671696   PMID:29255269   PMID:29407174   PMID:29438981   PMID:29524517   PMID:29688375   PMID:29770487   PMID:30457570  
PMID:30550785   PMID:30578322   PMID:30595499   PMID:31138677   PMID:31168659   PMID:32144202   PMID:32253918   PMID:32325033   PMID:32439975   PMID:32581705   PMID:33166869   PMID:34735734  
PMID:35222801   PMID:36089186   PMID:36351375   PMID:36773566   PMID:37505079   PMID:37622283   PMID:37781037   PMID:38355793   PMID:38433252   PMID:38464835   PMID:38609411   PMID:39183280  


Genomics

Comparative Map Data
Pgam5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395110,407,001 - 110,417,765 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5110,406,996 - 110,417,779 (-)EnsemblGRCm39 Ensembl
GRCm385110,259,135 - 110,269,899 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5110,259,130 - 110,269,913 (-)EnsemblGRCm38mm10GRCm38
MGSCv375110,688,154 - 110,698,918 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365110,499,457 - 110,510,184 (-)NCBIMGSCv36mm8
Celera5107,382,715 - 107,393,630 (-)NCBICelera
Cytogenetic Map5FNCBI
cM Map553.43NCBI
PGAM5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812132,710,842 - 132,722,734 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12132,710,819 - 132,722,734 (+)EnsemblGRCh38hg38GRCh38
GRCh3712133,287,428 - 133,299,320 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3612131,797,509 - 131,805,825 (+)NCBINCBI36Build 36hg18NCBI36
Celera12132,987,362 - 133,009,550 (+)NCBICelera
Cytogenetic Map12q24.33NCBI
HuRef12130,043,032 - 130,078,592 (+)NCBIHuRef
CHM1_112133,107,383 - 133,119,182 (+)NCBICHM1_1
T2T-CHM13v2.012132,759,704 - 132,771,989 (+)NCBIT2T-CHM13v2.0
Pgam5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81252,069,023 - 52,076,131 (+)NCBIGRCr8
mRatBN7.21246,409,324 - 46,416,410 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1246,409,369 - 46,416,420 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1247,585,056 - 47,592,113 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01248,190,483 - 48,197,540 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01247,251,009 - 47,258,066 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01252,467,417 - 52,474,533 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1252,467,450 - 52,474,511 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01254,202,823 - 54,210,153 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41246,555,416 - 46,562,477 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11246,422,347 - 46,429,409 (+)NCBI
Celera1247,965,707 - 47,972,769 (+)NCBICelera
Cytogenetic Map12q16NCBI
Pgam5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955482356,863 - 363,862 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955482356,863 - 363,666 (-)NCBIChiLan1.0ChiLan1.0
PGAM5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210140,814,495 - 140,831,151 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112140,814,741 - 140,827,668 (+)NCBINHGRI_mPanPan1
PGAM5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.126406,871 - 414,874 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl26407,174 - 414,860 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha26448,802 - 456,805 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.026464,504 - 472,485 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl26464,505 - 485,472 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.126405,826 - 413,824 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.026492,873 - 500,882 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.026424,108 - 432,107 (-)NCBIUU_Cfam_GSD_1.0
PGAM5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1422,773,136 - 22,780,720 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11422,773,135 - 22,780,904 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
PGAM5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111128,053,176 - 128,064,030 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl11128,053,795 - 128,065,720 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037116,802,167 - 116,811,028 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pgam5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474728,078,368 - 28,085,437 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474728,078,138 - 28,084,920 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pgam5
426 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:962
Count of miRNA genes:372
Interacting mature miRNAs:441
Transcripts:ENSMUST00000059229, ENSMUST00000112505, ENSMUST00000136738
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10045978Tir10_mtrypanosome infection response 10 (mouse)Not determined598019649114021986Mouse
1301399Cpfd3_mcerebellum pattern fissures (mouse)Not determined587386871121387065Mouse
25314310Syncl4_msynaptonemal complex length 4 (mouse)5103047866115538059Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574460661132528839Mouse
1357725Eae39_mexperimental allergic encephalomyelitis 39 (mouse)Not determined589418876118864028Mouse
14746986Manh58_mmandible shape 58 (mouse)5102446283136446283Mouse
25314317Sccor3_msynaptonemal complex length to mean MLH1 count ratio 3 (mouse)5104347866114738061Mouse
1300993Hycdc_mhypercapnic duty cycle (mouse)Not determined590561006124561151Mouse
1301126Bwem1_mbody weight day 30 males 1 (mouse)Not determined587386871121387065Mouse
1300659Pcd8ts1_mp-glycoprotein positive CD8 T cell subset 1 (mouse)Not determined597021753131021986Mouse
1301042Elmaz1_melevated maze behavior 1 (mouse)Not determined598019649116876624Mouse
1300913Bwefm_mbody weight females and males day 10 (mouse)Not determined5109439348143439459Mouse
10402486Dipa1_mdrug induced psychomotor activation 1 (mouse)Not determined595465549129465722Mouse
1357886Diht_mdopamine-induced hypothermia (mouse)Not determined5104498738115101540Mouse
10043958Chldq12_mcholesterol and HDL QTL 12 (mouse)Not determined587386871121387065Mouse
26884395Humsd2_mhumerus midshaft diameter 2, 10 week (mouse)570057343132528839Mouse
10412202Bbaa26_mB.burgdorferi-associated arthritis 26 (mouse)Not determined5104583688138555455Mouse
1301543Hypch_mhypercholesterolemia (mouse)Not determined5109238624139118905Mouse
12904945Tammq2_mtibialis anterior muscle mass QTL 2 (mouse)5100665965134665965Mouse
4142473Chlq11_mcirculating hormone level QTL 11 (mouse)Not determined5107906299141906412Mouse
1301419Cypr3_mcytokine production 3 (mouse)Not determined581019649115019803Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
12904959Smmq1_msoleus muscle mass QTL 1 (mouse)5100665965134665965Mouse
10412197Bbaa25_mB.burgdorferi-associated arthritis 25 (mouse)Not determined5109167240143167381Mouse
13506928Recrq8_mrecombination rate in male meiosis QTL 8 (mouse)574460661132528839Mouse
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572857343139985755Mouse
10401246Bglu13_mblood glucose level 13 (mouse)Not determined579539640113539786Mouse
1301713Dbsty2_mdiabesity 2 (mouse)Not determined576445064110445225Mouse
1301457Cfsw2_mcystic fibrosis survival to weaning 2 (mouse)Not determined590561006124561151Mouse
10401245Bglu18_mblood glucose level 18 (mouse)Not determined582838468116838597Mouse
1301974Chab7_mcholesterol absorption 7 (mouse)Not determined595233214129233330Mouse
11528550Sluc33_msusceptibility to lung cancer 33 (mouse)5104386871120711986Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
1300931Cocrb6_mcocaine related behavior 6 (mouse)Not determined576445064110445225Mouse
10412239Alpq7_malcohol preference QTL 7 (mouse)Not determined5104705939138705939Mouse
1300801Drb2_mdopamine receptor binding 2 (mouse)Not determined587386871121387065Mouse
1301829Thyls2_mthymic lymphoma susceptibility 2 (mouse)Not determined576445064110445225Mouse
9587780Afw16_mabdominal fat weight QTL 16 (mouse)Not determined592830166126830285Mouse
1357644Egrd1_mearly growth rate, direct effect 1 (mouse)Not determined595434580129434786Mouse
1357901Mdmsc2_mmodifier of muscularity 2 (mouse)Not determined5107561006112434786Mouse
12859290Criq2_mCitrobacter rodentium infection QTL 2 (mouse)5101332579135332579Mouse
1300940Actd3_mactivity-distance traveled 3 (mouse)Not determined596320385130320533Mouse
10755524Mono1_mmonocyte differential 1 (mouse)580849259114849259Mouse
1301362Prnr1_mprion resistance 1 (mouse)Not determined589418876146787935Mouse
1558774Lith17_mlithogenic gene 17 (mouse)Not determined595465549129465722Mouse
1357431Cia27_mcollagen induced arthritis 27 (mouse)Not determined575315348120018629Mouse
1301877Bbaa3_mB.burgdorferi-associated arthritis 3 (mouse)Not determined599455285112465722Mouse
1301624Aevm2_mautoimmune extremity vasculitis in MRL mice 2 (mouse)Not determined5101863832135864028Mouse
10043890Trigq4_mtriglyceride QTL 4 (mouse)Not determined5107906299141906412Mouse
4141652Mrdq2_mmodifier of retinal degeneration QTL 2 (mouse)Not determined110253106118093673Mouse
4141139Hmtb4_mhemostasis and thrombosis rebleeding time 4 (mouse)Not determined108762509126882944Mouse
11532736Sluc33b_msusceptibility to lung cancer 33b (mouse)5102945037136945196Mouse
4141519Hmtb5_mhemostasis and thrombosis bleeding time 5 (mouse)Not determined99949422126882944Mouse
1301858Smdq1_msegregation of mitochondrial DNA QTL 1 (mouse)Not determined597021753131021986Mouse
11049562Lmr24f_mleishmaniasis resistance 24f (mouse)590320962124321041Mouse
13464249Ahl16_mage related hearing loss, early onset 16 (mouse)576445064110445225Mouse
13464251Ahl21_mage related hearing loss, early onset 21 (mouse)5109167240143167381Mouse
13464244Ahl19_mage related hearing loss, early onset 19 (mouse)595465549129465722Mouse
1300968Skts4_mskin tumor susceptibility 4 (mouse)Not determined589418876124238239Mouse
13464241Ahl18_mage related hearing loss, early onset 18 (mouse)587386871121387065Mouse
13464243Ahl20_mage related hearing loss, early onset 20 (mouse)5107906299141906412Mouse
13464242Ahl17_mage related hearing loss, early onset 17 (mouse)582838468116838597Mouse

Markers in Region
AW324219  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385110,259,273 - 110,259,372UniSTSGRCm38
MGSCv375110,688,292 - 110,688,391UniSTSGRCm37
Celera5107,382,853 - 107,382,952UniSTS
Cytogenetic Map5FUniSTS
Whitehead/MRC_RH51337.91UniSTS


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001163538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_028273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC118260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC138924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC138925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY101410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY620990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000059229   ⟹   ENSMUSP00000057760
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5110,407,021 - 110,417,753 (-)Ensembl
GRCm38.p6 Ensembl5110,259,155 - 110,269,887 (-)Ensembl
Ensembl Acc Id: ENSMUST00000112505   ⟹   ENSMUSP00000108124
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5110,406,996 - 110,417,779 (-)Ensembl
GRCm38.p6 Ensembl5110,259,130 - 110,269,913 (-)Ensembl
Ensembl Acc Id: ENSMUST00000136738
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5110,413,103 - 110,413,901 (-)Ensembl
GRCm38.p6 Ensembl5110,265,237 - 110,266,035 (-)Ensembl
Ensembl Acc Id: ENSMUST00000196381   ⟹   ENSMUSP00000143477
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5110,413,448 - 110,417,720 (-)Ensembl
GRCm38.p6 Ensembl5110,265,582 - 110,269,854 (-)Ensembl
RefSeq Acc Id: NM_001163538   ⟹   NP_001157010
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395110,407,001 - 110,417,765 (-)NCBI
GRCm385110,259,135 - 110,269,899 (-)ENTREZGENE
MGSCv375110,688,154 - 110,698,918 (-)RGD
Celera5107,382,715 - 107,393,630 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_028273   ⟹   NP_082549
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395110,407,001 - 110,417,765 (-)NCBI
GRCm385110,259,135 - 110,269,899 (-)ENTREZGENE
MGSCv375110,688,154 - 110,698,918 (-)RGD
Celera5107,382,715 - 107,393,630 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_082549   ⟸   NM_028273
- Peptide Label: isoform 2
- UniProtKB: B7ZNW0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157010   ⟸   NM_001163538
- Peptide Label: isoform 1
- UniProtKB: Q8BM78 (UniProtKB/Swiss-Prot),   Q80VY8 (UniProtKB/Swiss-Prot),   Q3UK19 (UniProtKB/Swiss-Prot),   B2RSM6 (UniProtKB/Swiss-Prot),   Q9CZU2 (UniProtKB/Swiss-Prot),   Q8BX10 (UniProtKB/Swiss-Prot),   B7ZNW0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000057760   ⟸   ENSMUST00000059229
Ensembl Acc Id: ENSMUSP00000108124   ⟸   ENSMUST00000112505
Ensembl Acc Id: ENSMUSP00000143477   ⟸   ENSMUST00000196381

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BX10-F1-model_v2 AlphaFold Q8BX10 1-288 view protein structure

Promoters
RGD ID:6887520
Promoter ID:EPDNEW_M7210
Type:initiation region
Name:Pgam5_1
Description:Mus musculus phosphoglycerate mutase family member 5 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385110,269,851 - 110,269,911EPDNEW
RGD ID:6838029
Promoter ID:MM_KWN:43359
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000031473,   ENSMUST00000112505,   NM_028273,   OTTMUST00000064825
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365110,698,691 - 110,699,677 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1919792 AgrOrtholog
Ensembl Genes ENSMUSG00000029500 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000059229 ENTREZGENE
  ENSMUST00000059229.16 UniProtKB/Swiss-Prot
  ENSMUST00000112505 ENTREZGENE
  ENSMUST00000112505.9 UniProtKB/Swiss-Prot
  ENSMUST00000196381.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1240 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro His_Pase_superF_clade-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  His_PPase_superfam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mito_Ser/Thr_phosphatase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:72542 UniProtKB/Swiss-Prot
MGD MGI:1919792 ENTREZGENE
NCBI Gene 72542 ENTREZGENE
PANTHER PHOSPHOGLYCERATE MUTASE-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SERINE/THREONINE-PROTEIN PHOSPHATASE PGAM5, MITOCHONDRIAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam His_Phos_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pgam5 PhenoGen
SMART PGAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53254 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JG95_MOUSE UniProtKB/TrEMBL
  A1A4A7_MOUSE UniProtKB/TrEMBL
  B2RSM6 ENTREZGENE
  B7ZNW0 ENTREZGENE, UniProtKB/TrEMBL
  PGAM5_MOUSE UniProtKB/Swiss-Prot
  Q3UK19 ENTREZGENE
  Q80VY8 ENTREZGENE
  Q8BM78 ENTREZGENE
  Q8BX10 ENTREZGENE
  Q9CZU2 ENTREZGENE
UniProt Secondary B2RSM6 UniProtKB/Swiss-Prot
  Q3UK19 UniProtKB/Swiss-Prot
  Q80VY8 UniProtKB/Swiss-Prot
  Q8BM78 UniProtKB/Swiss-Prot
  Q9CZU2 UniProtKB/Swiss-Prot